ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65d07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105133:Os03g0584300 | 120 | 9e-28 | 2 | AK058939:Os03g0568500 | 66 | 3e-11 | 3 | AK067094:Os04g0653100 | 35 | 0.051 | 4 | AK070483:Os04g0470300 | 33 | 0.33 | 5 | AK059742:Os04g0470300 | 33 | 0.33 | 6 | Os04g0486800:Os04g0486800 | 31 | 0.95 | 7 | AY341845:Os01g0734000 | 30 | 2.1 | 8 | AK108909:Os01g0734000 | 30 | 2.1 | 9 | Os04g0691400:Os04g0691400 | 29 | 4.7 | 10 | Os05g0149200:Os05g0149200 | 28 | 6.2 | 11 | AK106349:Os01g0886000 | 28 | 6.2 | 12 | AK121149:Os05g0596600 | 28 | 8.1 | 13 | AK107823:Os05g0596600 | 28 | 8.1 |
|---|
>AK105133:Os03g0584300 | Length = 123 Score = 120 bits (302), Expect = 9e-28 Identities = 68/123 (55%), Positives = 77/123 (62%), Gaps = 1/123 (0%) Frame = +1 Query: 193 MDDFYVTIPXXXXXXXXXXXXXXKRGSVXXXXXXXXXXXXXXXXXXXXIWAFTGGH-SSS 369 M+DFYVTIP KRGS AF GH S S Sbjct: 1 MEDFYVTIPYGAAVLVGGVAGYLKRGSKASLAAGGGFGGALLLAGALSARAFARGHPSGS 60 Query: 370 LFATVLQTVCAAALTIVMTIRYMKTRKVVPAGIIATISAVVLIFYVYKISKGGNEVYLPV 549 LFA VLQTVCA ALT+VM IRY+KTRKV+PAGIIA +SA+VLIFY+YKIS GGN+VY+PV Sbjct: 61 LFAAVLQTVCAVALTVVMGIRYIKTRKVMPAGIIAAVSALVLIFYIYKISNGGNKVYVPV 120 Query: 550 SAE 558 SAE Sbjct: 121 SAE 123
>AK058939:Os03g0568500 | Length = 119 Score = 65.9 bits (159), Expect = 3e-11 Identities = 39/115 (33%), Positives = 57/115 (49%) Frame = +1 Query: 193 MDDFYVTIPXXXXXXXXXXXXXXKRGSVXXXXXXXXXXXXXXXXXXXXIWAFTGGHSSSL 372 M DF TIP +RGS + F +S L Sbjct: 1 MHDFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKTFEKRRNSYL 60 Query: 373 FATVLQTVCAAALTIVMTIRYMKTRKVVPAGIIATISAVVLIFYVYKISKGGNEV 537 A L+T+CA ALT VM RY++T K++PAG++A +SA++ FY++KI+ GGN + Sbjct: 61 -ALALETLCALALTYVMGQRYLETSKIMPAGVVAGLSALMSAFYLFKIATGGNHI 114
>AK067094:Os04g0653100 | Length = 207 Score = 35.4 bits (80), Expect = 0.051 Identities = 17/49 (34%), Positives = 32/49 (65%) Frame = +1 Query: 370 LFATVLQTVCAAALTIVMTIRYMKTRKVVPAGIIATISAVVLIFYVYKI 516 +FA+ + +AAL VM R+ K+ K+ PAG+++ +S V++ Y++ I Sbjct: 153 VFASSIGLGISAALLSVMGSRFKKSGKIFPAGVVSLVSLVMVGGYIHGI 201
>AK070483:Os04g0470300 | Length = 223 Score = 32.7 bits (73), Expect = 0.33 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = +1 Query: 355 GHSSSLFATVLQTVCAAALTIVMTIRYMKTRKVVPAGIIATISAVVLIFYVYKISKGGN 531 G SS +F + Q +A L + Y+ T +++P A++S + FY Y + GGN Sbjct: 153 GKSSFIFI-LGQAAISAVLAWKYSHAYILTNRILPWAFYASLSTAMACFYAYVLLSGGN 210
>AK059742:Os04g0470300 | Length = 223 Score = 32.7 bits (73), Expect = 0.33 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = +1 Query: 355 GHSSSLFATVLQTVCAAALTIVMTIRYMKTRKVVPAGIIATISAVVLIFYVYKISKGGN 531 G SS +F + Q +A L + Y+ T +++P A++S + FY Y + GGN Sbjct: 153 GKSSFIFI-LGQAAISAVLAWKYSHAYILTNRILPWAFYASLSTAMACFYAYVLLSGGN 210
>Os04g0486800:Os04g0486800 | Length = 874 Score = 31.2 bits (69), Expect = 0.95 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = -2 Query: 243 AAEDHQAVRDGDVEVIHAV---PGSSLLLPTGPGSCGKSRLIALTLPAATSLILSP 85 AA H + R G +E I + + L+LPTG G ++ A+ LP T L++SP Sbjct: 279 AAYGHDSFRQGQLEAIQQIVAGESTMLVLPTGAGKSLCYQVPAMILPGLT-LVVSP 333
>AY341845:Os01g0734000 | Length = 254 Score = 30.0 bits (66), Expect = 2.1 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = -2 Query: 270 PPLDVASDAAAEDHQAVRDGDVEVIHAVPGSSLLLPTG---PGSCGKSRLIALTLPAATS 100 PPL VA A+A + G +EV+ P S+ L P G + + + LPA TS Sbjct: 28 PPLAVAPAASATTSDGHQHGPLEVLEQPPCSNNLHPDGLVDGPQLAATTAVPMMLPAMTS 87 Query: 99 L 97 L Sbjct: 88 L 88
>AK108909:Os01g0734000 | Length = 254 Score = 30.0 bits (66), Expect = 2.1 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = -2 Query: 270 PPLDVASDAAAEDHQAVRDGDVEVIHAVPGSSLLLPTG---PGSCGKSRLIALTLPAATS 100 PPL VA A+A + G +EV+ P S+ L P G + + + LPA TS Sbjct: 28 PPLAVAPAASATTSDGHQHGPLEVLEQPPCSNNLHPDGLVDGPQLAATTAVPMMLPAMTS 87 Query: 99 L 97 L Sbjct: 88 L 88
>Os04g0691400:Os04g0691400 | Length = 510 Score = 28.9 bits (63), Expect = 4.7 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -3 Query: 479 MVAIIPAGTTFLVF--MYLIVMTIVNAAAQTVCRTVAKRELEWPPVKAQML 333 M+ ++P T L + Y +MT+ N +T+ R + LE PP Q L Sbjct: 255 MLRLLPIWATCLAYGVAYAQIMTLFNKQGRTLDRHIGHAGLELPPAALQTL 305
>Os05g0149200:Os05g0149200 | Length = 1122 Score = 28.5 bits (62), Expect = 6.2 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = +2 Query: 32 KLRIWWLPRVDEHARRGAGERIREVAAGRVKAIRRDLPQLPGPVGSRRE 178 K R+WW + E + GE AGR R+ + PG G RR+ Sbjct: 328 KRRVWWDRKTQEEPQDDQGESSNTTPAGRPAKGRKKAAENPG--GRRRK 374
>AK106349:Os01g0886000 | Length = 354 Score = 28.5 bits (62), Expect = 6.2 Identities = 10/37 (27%), Positives = 21/37 (56%) Frame = +1 Query: 577 YLLSSGVDAAFTNAKCPYSNCELFYSCETNICLFILK 687 Y V+ +F N P+S+C LF+ ++ +F+++ Sbjct: 208 YTKMKHVNPSFRNQATPFSDCSLFFGGPVDMSIFLMR 244
>AK121149:Os05g0596600 | Length = 1065 Score = 28.1 bits (61), Expect = 8.1 Identities = 22/62 (35%), Positives = 27/62 (43%) Frame = -2 Query: 186 PGSSLLLPTGPGSCGKSRLIALTLPAATSLILSPAPLRACSSTLGSHQIRNFSDSSTVRI 7 PG L L GP GKS L+ A +L PA L SS ++ DS V+I Sbjct: 58 PGPRLNLVVGPNGSGKSSLVC---AIALALAADPAILGRASSVAAF--VKRGEDSGHVKI 112 Query: 6 PL 1 L Sbjct: 113 SL 114
>AK107823:Os05g0596600 | Length = 279 Score = 28.1 bits (61), Expect = 8.1 Identities = 22/62 (35%), Positives = 27/62 (43%) Frame = -2 Query: 186 PGSSLLLPTGPGSCGKSRLIALTLPAATSLILSPAPLRACSSTLGSHQIRNFSDSSTVRI 7 PG L L GP GKS L+ A +L PA L SS ++ DS V+I Sbjct: 58 PGPRLNLVVGPNGSGKSSLVC---AIALALAADPAILGRASSVAAF--VKRGEDSGHVKI 112 Query: 6 PL 1 L Sbjct: 113 SL 114 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,431,705 Number of extensions: 521236 Number of successful extensions: 1646 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1643 Number of HSP's successfully gapped: 13 Length of query: 284 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 184 Effective length of database: 11,395,755 Effective search space: 2096818920 Effective search space used: 2096818920 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
