ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65b24 |
|---|---|
| Clone Library Name | barley_pub |
>Q6C4R3:FYV7_YARLI Protein FYV7 - Yarrowia lipolytica (Candida lipolytica)| Length = 229 Score = 37.0 bits (84), Expect = 0.083 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 409 HDKRKKRTSQSLNVEYEKKRVEDEKAKKERDAMIQAXXXXXXXXXXXXXXXXXXMFKRTR 588 H+ +K R + + +KA++ER+A IQ M K TR Sbjct: 151 HESQKPRKPMNFKERAALAKERKQKAREEREAQIQKNKEDRERKLKKRAKLTKQMTKTTR 210 Query: 589 SGQPVMKYRIEHLLE 633 +GQP+M RI +L+ Sbjct: 211 TGQPLMTPRINKILD 225
>P53536:PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplast precursor -| Vicia faba (Broad bean) Length = 1003 Score = 34.7 bits (78), Expect = 0.41 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Frame = +3 Query: 486 KEGAGCDDTGKEGGAREI*SEAKGA--*GEDVQEDEIRAACDEIQD--RASLGDCTRKLK 653 KEG ++T KEGG E E G G+D +EDE+ A E ++S+GD +KL Sbjct: 534 KEGGEEEETSKEGGEEEEEKEVGGGREEGDDGKEDEVEKAIAEKDGTVKSSIGDKKKKLP 593 Query: 654 Q 656 + Sbjct: 594 E 594
>Q6FUQ5:FYV7_CANGA Protein FYV7 - Candida glabrata (Yeast) (Torulopsis glabrata)| Length = 152 Score = 33.1 bits (74), Expect = 1.2 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = +1 Query: 412 DKR---KKRTSQSLNVEYEKKRVEDEKAKKERDAMIQAXXXXXXXXXXXXXXXXXXMFKR 582 DKR KK+ + ++ ++KR + EK + ER + M KR Sbjct: 67 DKRLEGKKKIDEKKELKKQRKREQREKLE-ERRRKEEEKVKIIRQKEQEREQKRRKMTKR 125 Query: 583 TRSGQPVMKYRIEHLL 630 TRSGQP+M +IE LL Sbjct: 126 TRSGQPLMAPKIEDLL 141
>Q12247:FYV7_YEAST Protein FYV7 - Saccharomyces cerevisiae (Baker's yeast)| Length = 151 Score = 32.7 bits (73), Expect = 1.6 Identities = 17/71 (23%), Positives = 37/71 (52%) Frame = +1 Query: 421 KKRTSQSLNVEYEKKRVEDEKAKKERDAMIQAXXXXXXXXXXXXXXXXXXMFKRTRSGQP 600 KK+ + ++ ++KR++ ++ K+R+ ++ + +RTR+GQP Sbjct: 72 KKKLDEKKEIKKQRKRMQKDELNKQRNEQLERIRVSKEKFQRREDRKKK-LTQRTRTGQP 130 Query: 601 VMKYRIEHLLE 633 +M +IE LL+ Sbjct: 131 LMGPKIEDLLD 141
>Q09863:YAFA_SCHPO Uncharacterized protein C29E6.10c - Schizosaccharomyces pombe| (Fission yeast) Length = 1085 Score = 32.3 bits (72), Expect = 2.0 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +1 Query: 370 EEGGADATDVPKPHDKRKKRTSQSLNVEYEKKRVEDEKAKKE 495 E+ A + + + RKKR Q L E EKK+ E E+ K+E Sbjct: 622 EQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKRE 663
>O88487:DC1I2_MOUSE Cytoplasmic dynein 1 intermediate chain 2 - Mus musculus (Mouse)| Length = 612 Score = 31.2 bits (69), Expect = 4.5 Identities = 16/45 (35%), Positives = 28/45 (62%) Frame = +1 Query: 382 ADATDVPKPHDKRKKRTSQSLNVEYEKKRVEDEKAKKERDAMIQA 516 +D +D+ +++K+R +Q + EKKR E+E+ KKE D +A Sbjct: 2 SDKSDLKAELERKKQRLAQ---IREEKKRKEEERKKKETDQKKEA 43
>Q8BW75:AOFB_MOUSE Amine oxidase [flavin-containing] B - Mus musculus (Mouse)| Length = 520 Score = 31.2 bits (69), Expect = 4.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -1 Query: 538 ISLAPPSLPVSSHPAPSLPSRPLHVSSRTPHSSFVKC 428 IS PP+L + H +P LP + SR P S +KC Sbjct: 261 ISAIPPALGMKIHYSPPLPMLRNQLISRVPLGSVIKC 297
>Q64GL0:EVL_XENLA Ena/VASP-like protein - Xenopus laevis (African clawed frog)| Length = 692 Score = 30.8 bits (68), Expect = 5.9 Identities = 19/41 (46%), Positives = 21/41 (51%) Frame = -1 Query: 541 QISLAPPSLPVSSHPAPSLPSRPLHVSSRTPHSSFVKCASS 419 QISL+PP P S P LH S R P SF C+SS Sbjct: 264 QISLSPPPAPGSHSPL------SLHQSVRHPSLSFSPCSSS 298
>Q63100:DC1I1_RAT Cytoplasmic dynein 1 intermediate chain 1 - Rattus norvegicus (Rat)| Length = 643 Score = 30.8 bits (68), Expect = 5.9 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = +1 Query: 382 ADATDVPKPHDKRKKRTSQSLNVEYEKKRVEDEKAKKERD 501 +D +D+ +++K+R +Q + EKKR E+E+ KKE D Sbjct: 2 SDKSDLKAELERKKQRLAQ---IREEKKRKEEERKKKEAD 38
>O88485:DC1I1_MOUSE Cytoplasmic dynein 1 intermediate chain 1 - Mus musculus (Mouse)| Length = 628 Score = 30.8 bits (68), Expect = 5.9 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = +1 Query: 382 ADATDVPKPHDKRKKRTSQSLNVEYEKKRVEDEKAKKERD 501 +D +D+ +++K+R +Q + EKKR E+E+ KKE D Sbjct: 2 SDKSDLKAELERKKQRLAQ---IREEKKRKEEERKKKEAD 38
>O14576:DC1I1_HUMAN Cytoplasmic dynein 1 intermediate chain 1 - Homo sapiens (Human)| Length = 645 Score = 30.8 bits (68), Expect = 5.9 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = +1 Query: 382 ADATDVPKPHDKRKKRTSQSLNVEYEKKRVEDEKAKKERD 501 +D +D+ +++K+R +Q + EKKR E+E+ KKE D Sbjct: 2 SDKSDLKAELERKKQRLAQ---IREEKKRKEEERKKKEAD 38
>P58028:AOFB_CAVPO Amine oxidase [flavin-containing] B - Cavia porcellus (Guinea pig)| Length = 520 Score = 30.8 bits (68), Expect = 5.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -1 Query: 538 ISLAPPSLPVSSHPAPSLPSRPLHVSSRTPHSSFVKC 428 IS PP+L + H P LP + SR P S +KC Sbjct: 261 ISAIPPALGMKIHFKPPLPMMKNQLVSRVPLGSVIKC 297
>Q6Q2J0:AOFA_PIG Amine oxidase [flavin-containing] A - Sus scrofa (Pig)| Length = 527 Score = 30.8 bits (68), Expect = 5.9 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 538 ISLAPPSLPVSSHPAPSLPSRPLHVSSRTPHSSFVKC 428 IS PP+L H P LPS + R P + +KC Sbjct: 270 ISAIPPTLTAKIHFRPELPSERNQLIQRLPMGAIIKC 306
>Q5NU32:AOFA_HORSE Amine oxidase [flavin-containing] A - Equus caballus (Horse)| Length = 527 Score = 30.8 bits (68), Expect = 5.9 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 538 ISLAPPSLPVSSHPAPSLPSRPLHVSSRTPHSSFVKC 428 IS PP+L H P LPS + R P + +KC Sbjct: 270 ISAIPPALTAKIHFKPELPSERNQLIQRLPMGAIIKC 306
>P58027:AOFA_CANFA Amine oxidase [flavin-containing] A - Canis familiaris (Dog)| Length = 527 Score = 30.8 bits (68), Expect = 5.9 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 538 ISLAPPSLPVSSHPAPSLPSRPLHVSSRTPHSSFVKC 428 IS PP+L H P LPS + R P + +KC Sbjct: 270 ISAIPPTLTAKIHFRPELPSERNQLIQRLPMGAIIKC 306
>Q9HCE9:TM16H_HUMAN Transmembrane protein 16H - Homo sapiens (Human)| Length = 1232 Score = 30.4 bits (67), Expect = 7.7 Identities = 30/97 (30%), Positives = 39/97 (40%) Frame = +3 Query: 372 GRRC*CNGCAKTT**EEEAHFTKLECGVREETCRGREGKEGAGCDDTGKEGGAREI*SEA 551 GRRC GC EEE E + E G G+EG G GG E Sbjct: 542 GRRCLSGGCGAPE--EEE------EAALVERRRAGEGGEEG-----DGPPGGKEE----- 583 Query: 552 KGA*GEDVQEDEIRAACDEIQDRASLGDCTRKLKQVS 662 ++ +EDE +E + L DC +LK+VS Sbjct: 584 --DEDDEEEEDEEEEEDEEEGEEGGLLDCGLRLKKVS 618
>Q28181:CNGB1_BOVIN 240 kDa protein of rod photoreceptor CNG-channel [Contains:| Glutamic acid-rich protein - Bos taurus (Bovine) Length = 1394 Score = 30.4 bits (67), Expect = 7.7 Identities = 25/73 (34%), Positives = 35/73 (47%) Frame = +3 Query: 417 EEEAHFTKLECGVREETCRGREGKEGAGCDDTGKEGGAREI*SEAKGA*GEDVQEDEIRA 596 EEE + E G +E GRE +E G +EGG +E E +G E+V+ E Sbjct: 402 EEEGREKEEEEGGEKEDEEGREKEEEEGRGKEEEEGGEKE---EEEGRGKEEVEGREEEE 458 Query: 597 ACDEIQDRASLGD 635 +E QD + L D Sbjct: 459 DEEEEQDHSVLLD 471
>Q3E772:YG169_YEAST Uncharacterized protein YGR169C-A - Saccharomyces cerevisiae| (Baker's yeast) Length = 92 Score = 30.4 bits (67), Expect = 7.7 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +1 Query: 427 RTSQSLNVEYEKKRVEDEKAKKERDAMIQA 516 R + +E E+KR E +AKKERDA++ A Sbjct: 47 RKENAKKLEEEQKRQEKARAKKERDALLTA 76
>Q5R4Q3:SEC62_PONPY Translocation protein SEC62 - Pongo pygmaeus (Orangutan)| Length = 399 Score = 30.4 bits (67), Expect = 7.7 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 394 DVPKPHDKRKKRTSQSLNVEYEKKRVEDEKAKKERD 501 D+ K DK K + + + + +K+ ++DEK KKE++ Sbjct: 105 DIKKEKDKGKAESGKEEDKKSKKENIKDEKTKKEKE 140
>Q99442:SEC62_HUMAN Translocation protein SEC62 - Homo sapiens (Human)| Length = 399 Score = 30.4 bits (67), Expect = 7.7 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 394 DVPKPHDKRKKRTSQSLNVEYEKKRVEDEKAKKERD 501 D+ K DK K + + + + +K+ ++DEK KKE++ Sbjct: 105 DIKKEKDKGKAESGKEEDKKSKKENIKDEKTKKEKE 140
>P21398:AOFA_BOVIN Amine oxidase [flavin-containing] A - Bos taurus (Bovine)| Length = 527 Score = 30.4 bits (67), Expect = 7.7 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 538 ISLAPPSLPVSSHPAPSLPSRPLHVSSRTPHSSFVKC 428 IS PP+L H P LPS + R P + +KC Sbjct: 270 ISAIPPTLTAKIHFRPELPSERNQLIQRLPMGAVIKC 306 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.316 0.129 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 93,625,258 Number of extensions: 1580950 Number of successful extensions: 6510 Number of sequences better than 10.0: 21 Number of HSP's gapped: 6439 Number of HSP's successfully gapped: 21 Length of query: 253 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 142 Effective length of database: 70,239,694 Effective search space: 9974036548 Effective search space used: 9974036548 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
