ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65b24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073471.1| Oryza sativa (japonica cultivar-group) Os12g0538100 (Os12g0538100) mRNA, complete cds Length = 927 Score = 387 bits (195), Expect = e-104 Identities = 422/497 (84%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 165 gcggaacgagcagcggctggga---ggcagcggcggggcgctctctctcgcggccttcgc 221 ||||||||||||||||||||| ||| ||||||| || || || ||||| |||||||| Sbjct: 208 gcggaacgagcagcggctggggagcggcggcggcggcgccctgtccctcgccgccttcgc 267 Query: 222 caacgccaagtccaggaacaccggctacaacccggcactcatcaagaagcagaaggagtt 281 | |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 268 ctacgccaagtccaggaacaccggctacaacccggccctcatcaagaagcagaaagagtt 327 Query: 282 ctacaggaatgctaaattgattagcaagtacaagaagtcgaagaagcaccaaaatcagtc 341 ||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||| Sbjct: 328 ctacaagaatgctaaattgattagcaagtacaagaggtcaaagaagcaacaaaatcagtc 387 Query: 342 aaactgtcctccacaatttccaacccttgaggaaggaggtgctgatgcaacggatgtgcc 401 || | |||||||| |||||||| | |||||||||||| |||||||| ||| | Sbjct: 388 aagcaatcctccaccatttccaattccaaaggaaggaggtgatgatgcaaacaatgcatc 447 Query: 402 aaaaccacatgataagaggaagaagcgcacttcacaaagcttgaatgtggagtacgagaa 461 ||| | ||| |||| |||||||||| | ||| |||||| || | ||||| ||||| Sbjct: 448 aaagctgcatagcaagaagaagaagcgcgttgcaccaagcttaaacgaagagtatgagaa 507 Query: 462 gaaacgtgtagaggacgagaaggcaaagaaggagcgggatgcgatgatacaggcaaagaa 521 ||||| | |||||| ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 508 aaaacgggcagaggatgagaaggcaaagaaggagcgggaagcgataattcaggcaaagag 567 Query: 522 ggaggagcgagagaaatctgaagcgaagcgaaaggagcttagggagaagatgttcaagag 581 ||||||||| |||| |||||||| | ||| | || | ||||||||||||||||||| Sbjct: 568 ggaggagcgggagaggtctgaagcaaggcggagagatttaagggagaagatgttcaagaa 627 Query: 582 gacgagatccgggcagcctgtgatgaaatacaggatcgagcatctcttggagactgcact 641 || ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| | Sbjct: 628 aacaagatctgggcagcctgtgatgaaatacaggatccagcatctgttggagactgcatt 687 Query: 642 agaaagctcaaacaagt 658 ||||||||||||||||| Sbjct: 688 agaaagctcaaacaagt 704
>dbj|AK109170.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-H05, full insert sequence Length = 927 Score = 387 bits (195), Expect = e-104 Identities = 422/497 (84%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 165 gcggaacgagcagcggctggga---ggcagcggcggggcgctctctctcgcggccttcgc 221 ||||||||||||||||||||| ||| ||||||| || || || ||||| |||||||| Sbjct: 208 gcggaacgagcagcggctggggagcggcggcggcggcgccctgtccctcgccgccttcgc 267 Query: 222 caacgccaagtccaggaacaccggctacaacccggcactcatcaagaagcagaaggagtt 281 | |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 268 ctacgccaagtccaggaacaccggctacaacccggccctcatcaagaagcagaaagagtt 327 Query: 282 ctacaggaatgctaaattgattagcaagtacaagaagtcgaagaagcaccaaaatcagtc 341 ||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||| Sbjct: 328 ctacaagaatgctaaattgattagcaagtacaagaggtcaaagaagcaacaaaatcagtc 387 Query: 342 aaactgtcctccacaatttccaacccttgaggaaggaggtgctgatgcaacggatgtgcc 401 || | |||||||| |||||||| | |||||||||||| |||||||| ||| | Sbjct: 388 aagcaatcctccaccatttccaattccaaaggaaggaggtgatgatgcaaacaatgcatc 447 Query: 402 aaaaccacatgataagaggaagaagcgcacttcacaaagcttgaatgtggagtacgagaa 461 ||| | ||| |||| |||||||||| | ||| |||||| || | ||||| ||||| Sbjct: 448 aaagctgcatagcaagaagaagaagcgcgttgcaccaagcttaaacgaagagtatgagaa 507 Query: 462 gaaacgtgtagaggacgagaaggcaaagaaggagcgggatgcgatgatacaggcaaagaa 521 ||||| | |||||| ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 508 aaaacgggcagaggatgagaaggcaaagaaggagcgggaagcgataattcaggcaaagag 567 Query: 522 ggaggagcgagagaaatctgaagcgaagcgaaaggagcttagggagaagatgttcaagag 581 ||||||||| |||| |||||||| | ||| | || | ||||||||||||||||||| Sbjct: 568 ggaggagcgggagaggtctgaagcaaggcggagagatttaagggagaagatgttcaagaa 627 Query: 582 gacgagatccgggcagcctgtgatgaaatacaggatcgagcatctcttggagactgcact 641 || ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| | Sbjct: 628 aacaagatctgggcagcctgtgatgaaatacaggatccagcatctgttggagactgcatt 687 Query: 642 agaaagctcaaacaagt 658 ||||||||||||||||| Sbjct: 688 agaaagctcaaacaagt 704
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 198 bits (100), Expect = 2e-47 Identities = 181/208 (87%) Strand = Plus / Minus Query: 451 gagtacgagaagaaacgtgtagaggacgagaaggcaaagaaggagcgggatgcgatgata 510 ||||| ||||| ||||| | |||||| ||||||||||||||||||||||| ||||| || Sbjct: 21463838 gagtatgagaaaaaacgggcagaggatgagaaggcaaagaaggagcgggaagcgataatt 21463779 Query: 511 caggcaaagaaggaggagcgagagaaatctgaagcgaagcgaaaggagcttagggagaag 570 |||||||||| ||||||||| |||| |||||||| | ||| | || | ||||||||| Sbjct: 21463778 caggcaaagagggaggagcgggagaggtctgaagcaaggcggagagatttaagggagaag 21463719 Query: 571 atgttcaagaggacgagatccgggcagcctgtgatgaaatacaggatcgagcatctcttg 630 |||||||||| || ||||| ||||||||||||||||||||||||||| ||||||| ||| Sbjct: 21463718 atgttcaagaaaacaagatctgggcagcctgtgatgaaatacaggatccagcatctgttg 21463659 Query: 631 gagactgcactagaaagctcaaacaagt 658 ||||||||| |||||||||||||||||| Sbjct: 21463658 gagactgcattagaaagctcaaacaagt 21463631 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 266 agaagcagaaggagttctacaggaatgctaaattgattagcaagtacaagaagtcgaaga 325 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| |||| Sbjct: 21464253 agaagcagaaagagttctacaagaatgctaaattgattagcaagtacaagaggtcaaaga 21464194 Query: 326 agcaccaaaatcagtcaaactgtcctccacaatttccaa 364 |||| ||||||||||||| | |||||||| |||||||| Sbjct: 21464193 agcaacaaaatcagtcaagcaatcctccaccatttccaa 21464155 Score = 107 bits (54), Expect = 6e-20 Identities = 92/104 (88%), Gaps = 3/104 (2%) Strand = Plus / Minus Query: 165 gcggaacgagcagcggctggga---ggcagcggcggggcgctctctctcgcggccttcgc 221 ||||||||||||||||||||| ||| ||||||| || || || ||||| |||||||| Sbjct: 21465267 gcggaacgagcagcggctggggagcggcggcggcggcgccctgtccctcgccgccttcgc 21465208 Query: 222 caacgccaagtccaggaacaccggctacaacccggcactcatca 265 | |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 21465207 ctacgccaagtccaggaacaccggctacaacccggccctcatca 21465164
>ref|NM_001052326.1| Oryza sativa (japonica cultivar-group) Os02g0131400 (Os02g0131400) mRNA, complete cds Length = 1947 Score = 50.1 bits (25), Expect = 0.012 Identities = 31/33 (93%) Strand = Plus / Plus Query: 97 gcggcggcggcgggcagcagcggaggaggaggg 129 ||||||||||||||| || |||||||||||||| Sbjct: 88 gcggcggcggcgggcggcggcggaggaggaggg 120
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 50.1 bits (25), Expect = 0.012 Identities = 31/33 (93%) Strand = Plus / Minus Query: 97 gcggcggcggcgggcagcagcggaggaggaggg 129 ||||||||||||||| || |||||||||||||| Sbjct: 1648721 gcggcggcggcgggcggcggcggaggaggaggg 1648689
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 50.1 bits (25), Expect = 0.012 Identities = 31/33 (93%) Strand = Plus / Minus Query: 97 gcggcggcggcgggcagcagcggaggaggaggg 129 ||||||||||||||| || |||||||||||||| Sbjct: 85824 gcggcggcggcgggcggcggcggaggaggaggg 85792
>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains the 5' end of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1, a novel gene, the 5' end of the PBX3 gene for pre-B-cell leukemia transcription factor 3 and three CpG islands, complete sequence Length = 109081 Score = 48.1 bits (24), Expect = 0.046 Identities = 30/32 (93%) Strand = Plus / Minus Query: 97 gcggcggcggcgggcagcagcggaggaggagg 128 ||||||||||||||| || ||||||||||||| Sbjct: 65380 gcggcggcggcgggcggcggcggaggaggagg 65349
>emb|CR855205.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0805A05, complete sequence Length = 113067 Score = 44.1 bits (22), Expect = 0.72 Identities = 28/30 (93%) Strand = Plus / Minus Query: 97 gcggcggcggcgggcagcagcggaggagga 126 |||||||||||| ||||| ||||||||||| Sbjct: 91588 gcggcggcggcgagcagccgcggaggagga 91559
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 44.1 bits (22), Expect = 0.72 Identities = 28/30 (93%) Strand = Plus / Minus Query: 97 gcggcggcggcgggcagcagcggaggagga 126 |||||||||||| ||||| ||||||||||| Sbjct: 10353 gcggcggcggcgagcagccgcggaggagga 10324
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Minus Query: 674 ccaagactaatgccacactaat 695 |||||||||||||||||||||| Sbjct: 6166326 ccaagactaatgccacactaat 6166305
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 gcggcggcggcgggcagcagcg 118 |||||||||||||||||||||| Sbjct: 4377706 gcggcggcggcgggcagcagcg 4377685
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 cggcggcggcgggcagcagcgg 119 |||||||||||||||||||||| Sbjct: 8666235 cggcggcggcgggcagcagcgg 8666256 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 gcagcggcggggcgctctctctcgc 212 ||||||||||||| ||||||||||| Sbjct: 12111727 gcagcggcggggctctctctctcgc 12111751
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Minus Query: 674 ccaagactaatgccacactaat 695 |||||||||||||||||||||| Sbjct: 3912927 ccaagactaatgccacactaat 3912906
>gb|AC099790.3| Homo sapiens chromosome 1 clone RP11-397G23, complete sequence Length = 213942 Score = 44.1 bits (22), Expect = 0.72 Identities = 25/26 (96%) Strand = Plus / Plus Query: 97 gcggcggcggcgggcagcagcggagg 122 ||||||||||||||| |||||||||| Sbjct: 90851 gcggcggcggcgggcggcagcggagg 90876
>emb|AL662961.3|OSJN00164 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028M15, complete sequence Length = 187330 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 cggcggcggcgggcagcagcgg 119 |||||||||||||||||||||| Sbjct: 8774 cggcggcggcgggcagcagcgg 8795
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 44.1 bits (22), Expect = 0.72 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 cggcggcggcgggcagcagcgg 119 |||||||||||||||||||||| Sbjct: 126678 cggcggcggcgggcagcagcgg 126699
>gb|CP000482.1| Pelobacter propionicus DSM 2379, complete genome Length = 4008000 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 gaaggcaaagaaggagcggga 500 ||||||||||||||||||||| Sbjct: 3032163 gaaggcaaagaaggagcggga 3032183
>ref|XM_001233020.1| PREDICTED: Gallus gallus similar to Cytochrome c oxidase subunit 5A, mitochondrial precursor (Cytochrome c oxidase polypeptide Va) (LOC769735), mRNA Length = 1131 Score = 42.1 bits (21), Expect = 2.9 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 98 cggcggcggcgg-gcagcagcggaggaggaggg 129 |||||||||||| ||||| |||||||||||||| Sbjct: 79 cggcggcggcggcgcagcggcggaggaggaggg 47
>emb|CT834556.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA037C10, full insert sequence Length = 1780 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gcggcggcggcgggcagcagc 117 ||||||||||||||||||||| Sbjct: 132 gcggcggcggcgggcagcagc 152
>ref|XM_001190315.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC581042 (LOC581042), partial mRNA Length = 2155 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 471 agaggacgagaaggcaaagaaggag 495 |||||| |||||||||||||||||| Sbjct: 1089 agaggaagagaaggcaaagaaggag 1113
>ref|XM_795022.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC581042 (LOC581042), partial mRNA Length = 1822 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 471 agaggacgagaaggcaaagaaggag 495 |||||| |||||||||||||||||| Sbjct: 756 agaggaagagaaggcaaagaaggag 780
>gb|CP000435.1| Synechococcus sp. CC9311, complete genome Length = 2606748 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 aagaagcggaacgagcagcgg 180 ||||||||||||||||||||| Sbjct: 1435388 aagaagcggaacgagcagcgg 1435368
>ref|NM_198103.2| Mus musculus exocyst complex component 8 (Exoc8), mRNA Length = 7427 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cgcggcggcggcgggcagcag 116 ||||||||||||||||||||| Sbjct: 400 cgcggcggcggcgggcagcag 380
>gb|AY773284.1| Lampetra fluviatilis thyroid transcription factor 1 (TTF1) mRNA, complete cds Length = 1280 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gcggcggcggcgggcagcagc 117 ||||||||||||||||||||| Sbjct: 874 gcggcggcggcgggcagcagc 894
>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0043H23, complete sequence Length = 134097 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ggcagcggcggggcgctctct 207 ||||||||||||||||||||| Sbjct: 86006 ggcagcggcggggcgctctct 86026
>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08, complete sequence Length = 152527 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ggcagcggcggggcgctctct 207 ||||||||||||||||||||| Sbjct: 121484 ggcagcggcggggcgctctct 121504
>gb|AC102050.13| Mus musculus chromosome 8, clone RP23-389O4, complete sequence Length = 203942 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cgcggcggcggcgggcagcag 116 ||||||||||||||||||||| Sbjct: 44973 cgcggcggcggcgggcagcag 44993
>ref|XM_546792.2| PREDICTED: Canis familiaris similar to Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead-related transcription factor 1) (FREAC-1) (Forkhead-related activator-1) (LOC489672), mRNA Length = 1182 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ggcggcggcgggcagcagcgg 119 ||||||||||||||||||||| Sbjct: 801 ggcggcggcgggcagcagcgg 781
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gacgcggcggcggcgggcagc 114 ||||||||||||||||||||| Sbjct: 74505 gacgcggcggcggcgggcagc 74485
>gb|BC057052.1| Mus musculus exocyst complex component 8, mRNA (cDNA clone MGC:67332 IMAGE:6822067), complete cds Length = 4617 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cgcggcggcggcgggcagcag 116 ||||||||||||||||||||| Sbjct: 400 cgcggcggcggcgggcagcag 380
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 2.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 gcggcggcgggcagcagcggaggaggagg 128 |||||||||||| || ||||||||||||| Sbjct: 29238629 gcggcggcgggcggcggcggaggaggagg 29238601
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ggcagcggcggggcgctctct 207 ||||||||||||||||||||| Sbjct: 7383229 ggcagcggcggggcgctctct 7383249
>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2 Length = 98769 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 atacaggcaaagaaggaggag 528 ||||||||||||||||||||| Sbjct: 73759 atacaggcaaagaaggaggag 73779
>emb|AL672234.27| Mouse DNA sequence from clone RP23-356I16 on chromosome 8, complete sequence Length = 221012 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cgcggcggcggcgggcagcag 116 ||||||||||||||||||||| Sbjct: 39025 cgcggcggcggcgggcagcag 39045
>emb|AL662975.3|OSJN00180 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071G03, complete sequence Length = 135169 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 gcagcggcggggcgctctctctcgc 212 ||||||||||||| ||||||||||| Sbjct: 40277 gcagcggcggggctctctctctcgc 40301
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 42.1 bits (21), Expect = 2.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 gcggcggcgggcagcagcggaggaggagg 128 |||||||||||| || ||||||||||||| Sbjct: 1427 gcggcggcgggcggcggcggaggaggagg 1399
>ref|XM_959894.1| Neurospora crassa OR74A hypothetical protein (NCU03128.1) partial mRNA Length = 1884 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 atacaggcaaagaaggaggag 528 ||||||||||||||||||||| Sbjct: 1462 atacaggcaaagaaggaggag 1482
>emb|CR523162.1| Gallus gallus finished cDNA, clone ChEST365o14 Length = 898 Score = 42.1 bits (21), Expect = 2.9 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 98 cggcggcggcgg-gcagcagcggaggaggaggg 129 |||||||||||| ||||| |||||||||||||| Sbjct: 123 cggcggcggcggcgcagcggcggaggaggaggg 91
>emb|BX934048.2| Gallus gallus finished cDNA, clone ChEST60j16 Length = 1403 Score = 42.1 bits (21), Expect = 2.9 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 98 cggcggcggcgg-gcagcagcggaggaggaggg 129 |||||||||||| ||||| |||||||||||||| Sbjct: 79 cggcggcggcggcgcagcggcggaggaggaggg 47
>gb|AY103846.1| Zea mays PCO130752 mRNA sequence Length = 1237 Score = 42.1 bits (21), Expect = 2.9 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 97 gcggcggcggcgggcagcagcggaggagg 125 ||||||||||||| ||||||||||||||| Sbjct: 136 gcggcggcggcgg-cagcagcggaggagg 163
>gb|AC139158.3| Mus musculus BAC clone RP24-77I7 from 8, complete sequence Length = 203921 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cgcggcggcggcgggcagcag 116 ||||||||||||||||||||| Sbjct: 103009 cgcggcggcggcgggcagcag 102989
>gb|AY860423.1| Gonium pectorale albino3-like protein (ALB3-1) gene, complete cds Length = 4644 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 cggcggcggcgggcagcagcg 118 ||||||||||||||||||||| Sbjct: 4097 cggcggcggcgggcagcagcg 4117 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 128,426,547 Number of extensions: 8137216 Number of successful extensions: 187860 Number of sequences better than 10.0: 42 Number of HSP's gapped: 187852 Number of HSP's successfully gapped: 53 Length of query: 760 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 738 Effective length of database: 18,508,616,841 Effective search space: 13659359228658 Effective search space used: 13659359228658 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
