ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62n07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104863:Os01g0973400 | 335 | 2e-92 | 2 | AK099210:Os01g0973400 | 335 | 2e-92 | 3 | AK068879:Os01g0973400 | 335 | 2e-92 | 4 | AK060011:Os01g0973400 | 335 | 2e-92 | 5 | AK071317:Os03g0202300 | 124 | 1e-28 | 6 | AK065688:Os01g0640800 | 103 | 2e-22 | 7 | Os02g0804900:Os02g0804900 | 30 | 1.9 | 8 | AK059663:Os05g0556700 | 30 | 2.4 | 9 | Os03g0193700:Os03g0193700 | 29 | 5.4 | 10 | AK066586:Os04g0509300 | 28 | 9.3 |
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>AK104863:Os01g0973400 | Length = 386 Score = 335 bits (860), Expect = 2e-92 Identities = 165/194 (85%), Positives = 177/194 (91%) Frame = +3 Query: 3 GFARNLKGHEIVEQVLAIEESFKHRVTNVVFMGMGEPMLNLKAVLEAHQCLNKELKIGQR 182 GFARNL HEIVEQVLAIEE+F+HRVTNVVFMGMGEPMLNLK+VLEAH+CLNKELKIGQR Sbjct: 163 GFARNLHAHEIVEQVLAIEETFQHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKELKIGQR 222 Query: 183 MMTISTVGVPNTISKLASHKLQSTLAVSLHAPNQRLRETIVPSAKAYPLEALMDDCKNYF 362 M+TISTVGVP+TI KLASHKLQSTLAVSLHAPNQ+LRETIVPSAK+YPLEALMDDCKNYF Sbjct: 223 MITISTVGVPSTIKKLASHKLQSTLAVSLHAPNQKLRETIVPSAKSYPLEALMDDCKNYF 282 Query: 363 LETGRRVSFEYTLLAGINDEKXXXXXXXXXXXXCGGGYHVNLIPYNPVEGSEYKRPYRKA 542 LETGRRVSFEYTLLAGIND K CGGGYHVNLIPYNP++GSEYKRPYRK Sbjct: 283 LETGRRVSFEYTLLAGINDAKEHAEELAELLHTCGGGYHVNLIPYNPIQGSEYKRPYRKV 342 Query: 543 IQAFVDALESRKIT 584 +QAFVDALE+RKIT Sbjct: 343 VQAFVDALEARKIT 356
>AK099210:Os01g0973400 | Length = 386 Score = 335 bits (860), Expect = 2e-92 Identities = 165/194 (85%), Positives = 177/194 (91%) Frame = +3 Query: 3 GFARNLKGHEIVEQVLAIEESFKHRVTNVVFMGMGEPMLNLKAVLEAHQCLNKELKIGQR 182 GFARNL HEIVEQVLAIEE+F+HRVTNVVFMGMGEPMLNLK+VLEAH+CLNKELKIGQR Sbjct: 163 GFARNLHAHEIVEQVLAIEETFQHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKELKIGQR 222 Query: 183 MMTISTVGVPNTISKLASHKLQSTLAVSLHAPNQRLRETIVPSAKAYPLEALMDDCKNYF 362 M+TISTVGVP+TI KLASHKLQSTLAVSLHAPNQ+LRETIVPSAK+YPLEALMDDCKNYF Sbjct: 223 MITISTVGVPSTIKKLASHKLQSTLAVSLHAPNQKLRETIVPSAKSYPLEALMDDCKNYF 282 Query: 363 LETGRRVSFEYTLLAGINDEKXXXXXXXXXXXXCGGGYHVNLIPYNPVEGSEYKRPYRKA 542 LETGRRVSFEYTLLAGIND K CGGGYHVNLIPYNP++GSEYKRPYRK Sbjct: 283 LETGRRVSFEYTLLAGINDAKEHAEELAELLHTCGGGYHVNLIPYNPIQGSEYKRPYRKV 342 Query: 543 IQAFVDALESRKIT 584 +QAFVDALE+RKIT Sbjct: 343 VQAFVDALEARKIT 356
>AK068879:Os01g0973400 | Length = 386 Score = 335 bits (860), Expect = 2e-92 Identities = 165/194 (85%), Positives = 177/194 (91%) Frame = +3 Query: 3 GFARNLKGHEIVEQVLAIEESFKHRVTNVVFMGMGEPMLNLKAVLEAHQCLNKELKIGQR 182 GFARNL HEIVEQVLAIEE+F+HRVTNVVFMGMGEPMLNLK+VLEAH+CLNKELKIGQR Sbjct: 163 GFARNLHAHEIVEQVLAIEETFQHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKELKIGQR 222 Query: 183 MMTISTVGVPNTISKLASHKLQSTLAVSLHAPNQRLRETIVPSAKAYPLEALMDDCKNYF 362 M+TISTVGVP+TI KLASHKLQSTLAVSLHAPNQ+LRETIVPSAK+YPLEALMDDCKNYF Sbjct: 223 MITISTVGVPSTIKKLASHKLQSTLAVSLHAPNQKLRETIVPSAKSYPLEALMDDCKNYF 282 Query: 363 LETGRRVSFEYTLLAGINDEKXXXXXXXXXXXXCGGGYHVNLIPYNPVEGSEYKRPYRKA 542 LETGRRVSFEYTLLAGIND K CGGGYHVNLIPYNP++GSEYKRPYRK Sbjct: 283 LETGRRVSFEYTLLAGINDAKEHAEELAELLHTCGGGYHVNLIPYNPIQGSEYKRPYRKV 342 Query: 543 IQAFVDALESRKIT 584 +QAFVDALE+RKIT Sbjct: 343 VQAFVDALEARKIT 356
>AK060011:Os01g0973400 | Length = 386 Score = 335 bits (860), Expect = 2e-92 Identities = 165/194 (85%), Positives = 177/194 (91%) Frame = +3 Query: 3 GFARNLKGHEIVEQVLAIEESFKHRVTNVVFMGMGEPMLNLKAVLEAHQCLNKELKIGQR 182 GFARNL HEIVEQVLAIEE+F+HRVTNVVFMGMGEPMLNLK+VLEAH+CLNKELKIGQR Sbjct: 163 GFARNLHAHEIVEQVLAIEETFQHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKELKIGQR 222 Query: 183 MMTISTVGVPNTISKLASHKLQSTLAVSLHAPNQRLRETIVPSAKAYPLEALMDDCKNYF 362 M+TISTVGVP+TI KLASHKLQSTLAVSLHAPNQ+LRETIVPSAK+YPLEALMDDCKNYF Sbjct: 223 MITISTVGVPSTIKKLASHKLQSTLAVSLHAPNQKLRETIVPSAKSYPLEALMDDCKNYF 282 Query: 363 LETGRRVSFEYTLLAGINDEKXXXXXXXXXXXXCGGGYHVNLIPYNPVEGSEYKRPYRKA 542 LETGRRVSFEYTLLAGIND K CGGGYHVNLIPYNP++GSEYKRPYRK Sbjct: 283 LETGRRVSFEYTLLAGINDAKEHAEELAELLHTCGGGYHVNLIPYNPIQGSEYKRPYRKV 342 Query: 543 IQAFVDALESRKIT 584 +QAFVDALE+RKIT Sbjct: 343 VQAFVDALEARKIT 356
>AK071317:Os03g0202300 | Length = 388 Score = 124 bits (310), Expect = 1e-28 Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 3/215 (1%) Frame = +3 Query: 3 GFARNLKGHEIVEQVLAIEESFKHRVTNVVFMGMGEPMLNLKAVLEAHQCL-NKELKIGQ 179 GF NL EIVEQ+ + S ++ NVVFMGMGEP+ N A++EA Q L ++ Sbjct: 154 GFKSNLSSGEIVEQL--VHASRYSQIRNVVFMGMGEPLNNYTALVEAIQVLIGSPFQLSP 211 Query: 180 RMMTISTVGVPNTISKLASHKLQSTLAVSLHAPNQRLRETIVPSAKAYPLEALMDDCKNY 359 + +T+STVG+ ++I+K + LAVSLHAP+Q +R I+P+A+A+PL LM+ ++Y Sbjct: 212 KRITVSTVGIIHSINKFNNDLPNINLAVSLHAPDQDIRCHIMPAARAFPLVKLMNALQSY 271 Query: 360 FLETGRRVSFEYTLLAGINDEKXXXXXXXXXXXXCGGGYHVNLIPYNPVEGS-EYKRPYR 536 E+ + + EY +L G+ND++ VNLIP+NP+ S +K Sbjct: 272 QNESKQTIFIEYIMLDGVNDQEQHAHQLGKLLEMFKA--VVNLIPFNPIGSSNNFKTSSE 329 Query: 537 KAIQAFVDALES-RKITVSVRQTRGLDANAACGQL 638 ++ F L I ++RQ G D ACGQL Sbjct: 330 HNVKKFQKILRGIYNIRTTIRQQMGQDIAGACGQL 364
>AK065688:Os01g0640800 | Length = 405 Score = 103 bits (257), Expect = 2e-22 Identities = 77/218 (35%), Positives = 108/218 (49%), Gaps = 6/218 (2%) Frame = +3 Query: 3 GFARNLKGHEIVEQVLAIEESFKHR---VTNVVFMGMGEPMLNLKAVLEAHQCLNKE--L 167 G ++L EIVEQ + F +TNVVFMGMGEP+ N+ VL+A + E L Sbjct: 170 GLRKHLSTAEIVEQAVFARRLFSDEFGSITNVVFMGMGEPLHNIDNVLKASAIMVDEQGL 229 Query: 168 KIGQRMMTISTVGVPNTISKLASHKLQSTLAVSLHAPNQRLRETIVPSAKAYPLEALMDD 347 + R +T+ST G+ I + LAVSL+A +R I+P + Y L L+ Sbjct: 230 QFSPRKVTVSTSGLVPQIKRFLQES-NCALAVSLNATTDEVRNWIMPINRKYNLSLLLGT 288 Query: 348 CKNYF-LETGRRVSFEYTLLAGINDEKXXXXXXXXXXXXCGGGYHVNLIPYNPVEGSEYK 524 + L+ +V FEY +LAG+ND G +NLI +NP GS++K Sbjct: 289 LREEIRLKKKYKVFFEYVMLAGVNDSVDDAKRLVDLVR--GIPCKINLISFNPHSGSQFK 346 Query: 525 RPYRKAIQAFVDALESRKITVSVRQTRGLDANAACGQL 638 + I F + L + V VR +RG D AACGQL Sbjct: 347 PTPDEKIIEFRNILIQDGLVVFVRLSRGDDQMAACGQL 384
>Os02g0804900:Os02g0804900 | Length = 810 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/47 (25%), Positives = 23/47 (48%) Frame = -1 Query: 169 FSSLFKHWCASRTALRFNMGSPIPMNTTFVTLCLNDSSMANTCSTIS 29 + + + W + FN G+P P ++ +C+ND S+ T+S Sbjct: 190 YHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMNDDSIEGIYDTLS 236
>AK059663:Os05g0556700 | Length = 328 Score = 30.0 bits (66), Expect = 2.4 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Frame = +3 Query: 465 GGGYHVNLIPYNPVEGSEYKRPYRK--AIQAFVDALESRKITVSVRQTRGLDANAACGQL 638 GGG+ ++ V+G K P +K AI+AF AL+S I + GLD+ QL Sbjct: 205 GGGWP-EMVMAKEVDGLARKTPGKKSHAIEAFSRALQS--IPTIIADNAGLDSADLISQL 261 Query: 639 RNEFQK 656 R E K Sbjct: 262 RAEHHK 267
>Os03g0193700:Os03g0193700 | Length = 162 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -3 Query: 644 ISELPTSRISVKPTGLSDADRDLPRFQRINKS 549 I+ LP R ++KPTGL + R L R +RI S Sbjct: 3 ITGLPRVRFALKPTGLRKSGRTLLRARRIRLS 34
>AK066586:Os04g0509300 | Length = 1090 Score = 28.1 bits (61), Expect = 9.3 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +2 Query: 167 KDWAKDDDNLNSRSSQHDK*ASISQASVDTGSQPACPKS 283 K KD ++L S S+ + +S + D +PACPK+ Sbjct: 736 KHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEEPACPKA 774 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,382,876 Number of extensions: 597417 Number of successful extensions: 1581 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1575 Number of HSP's successfully gapped: 10 Length of query: 312 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 212 Effective length of database: 11,395,755 Effective search space: 2415900060 Effective search space used: 2415900060 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
