ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62m09 |
|---|---|
| Clone Library Name | barley_pub |
>P26368:U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit - Homo sapiens (Human)| Length = 475 Score = 261 bits (666), Expect = 1e-68 Identities = 163/382 (42%), Positives = 214/382 (56%), Gaps = 3/382 (0%) Frame = +3 Query: 654 GQLPAVAPLITGMLPNMFNFTAPTQFNPLVMQPQAMTQQATRHARRVYVGGLPPTANEQT 833 GQ+PA A L T M P+ T PT P+V Q TR ARR+YVG +P E+ Sbjct: 114 GQIPATALLPT-MTPDGLAVT-PTPV-PVV------GSQMTRQARRLYVGNIPFGITEEA 164 Query: 834 VAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAP 1013 + +FN M +GG T PG+ VL V IN DK FAF+E RSV+E + AMA DGI+F+G Sbjct: 165 MMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQS 223 Query: 1014 VKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 1193 +K+RRP DY P + PS P + V P SA ++F+GGLP Y + Q Sbjct: 224 LKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQ 274 Query: 1194 VRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRR 1373 V+ELL SFGPL+ F+LVKD TG SKGYAFC Y D+NVTD A A LNG+++GDK L V+R Sbjct: 275 VKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQR 334 Query: 1374 ANQGTSQP---RPEQETIXXXXXXXXXXXXXXXXXGGALPTKVVCLTQVISADELRDDEE 1544 A+ G P G PT+V+CL ++ +EL DDEE Sbjct: 335 ASVGAKNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEE 394 Query: 1545 YEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGR 1724 YE+I+ED+R+E KYG + IPR P VPG GK+F+E+ + KA G+ GR Sbjct: 395 YEEIVEDVRDECSKYGLVKSIEIPR--PVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 452 Query: 1725 KFGGNQVVAVFYPENKFTDGDY 1790 KF VV + + + D+ Sbjct: 453 KFANRVVVTKYCDPDSYHRRDF 474
>P26369:U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit - Mus musculus (Mouse)| Length = 475 Score = 259 bits (663), Expect = 2e-68 Identities = 165/385 (42%), Positives = 217/385 (56%), Gaps = 6/385 (1%) Frame = +3 Query: 654 GQLPAVAPLITGMLPNMFNFTAPTQFNPLVMQPQAMTQQATRHARRVYVGGLPPTANEQT 833 GQ+PA A L T M P+ T PT P+V Q TR ARR+YVG +P E+ Sbjct: 114 GQIPATALLPT-MTPDGLAVT-PTPV-PVV------GSQMTRQARRLYVGNIPFGITEEA 164 Query: 834 VAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAP 1013 + +FN M +GG T PG+ VL V IN DK FAF+E RSV+E + AMA DGI+F+G Sbjct: 165 MMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQS 223 Query: 1014 VKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 1193 +K+RRP DY P + PS P + V P SA ++F+GGLP Y + Q Sbjct: 224 LKIRRPHDYQPLPGMSENPSVYVPGVVSTVV---PDSA------HKLFIGGLPNYLNDDQ 274 Query: 1194 VRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRR 1373 V+ELL SFGPL+ F+LVKD TG SKGYAFC Y D+NVTD A A LNG+++GDK L V+R Sbjct: 275 VKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQR 334 Query: 1374 ANQG------TSQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTKVVCLTQVISADELRD 1535 A+ G S P +T G PT+V+CL ++ +EL D Sbjct: 335 ASVGAKNATLVSLPSTINQT---PVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLD 391 Query: 1536 DEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGM 1715 DEEYE+I+ED+R+E KYG + IPR P VPG GK+F+E+ + KA G+ Sbjct: 392 DEEYEEIVEDVRDECSKYGLVKSIEIPR--PVDGVEVPGCGKIFVEFTSVFDCQKAMQGL 449 Query: 1716 HGRKFGGNQVVAVFYPENKFTDGDY 1790 GRKF VV + + + D+ Sbjct: 450 TGRKFANRVVVTKYCDPDSYHRRDF 474
>Q24562:U2AF2_DROME Splicing factor U2AF 50 kDa subunit - Drosophila melanogaster (Fruit| fly) Length = 416 Score = 246 bits (627), Expect = 3e-64 Identities = 143/335 (42%), Positives = 193/335 (57%), Gaps = 1/335 (0%) Frame = +3 Query: 774 TRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMR 953 TR ARR+YVG +P E+ + +FNQ M +G A G VL IN DK FAF+E R Sbjct: 89 TRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQINLDKNFAFLEFR 147 Query: 954 SVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVG-LTPGSAG 1130 S++E + AMA DGI +G +K+RRP DY P P+ ++ G + + P S Sbjct: 148 SIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSSGVISTVVPDS-- 205 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 P +IF+GGLP Y + QV+ELL SFG LR F+LVKD TG SKGYAFC Y DL++T Sbjct: 206 ----PHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSIT 261 Query: 1311 DIACAALNGIKMGDKTLTVRRANQGTSQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTK 1490 D + A LNG+++GDK L V+RA+ G + T PT+ Sbjct: 262 DQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGLSNVVT---SGPPTE 318 Query: 1491 VVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFL 1670 V+CL +++ DELRD+EEYEDILED++EE KYG + IPR P VPG GKVF+ Sbjct: 319 VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPR--PIEGVEVPGCGKVFV 376 Query: 1671 EYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKF 1775 E+ + KA+ + GRKF VV ++ +K+ Sbjct: 377 EFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKY 411
>P90978:U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit - Caenorhabditis elegans| Length = 496 Score = 227 bits (578), Expect = 2e-58 Identities = 145/371 (39%), Positives = 198/371 (53%), Gaps = 11/371 (2%) Frame = +3 Query: 696 PNMFNFTAPTQFNPLVMQ---PQAMTQQA--------TRHARRVYVGGLPPTANEQTVAI 842 P F T P ++ + P+ Q A T +RR+YVG +P NE+ + Sbjct: 143 PTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLD 202 Query: 843 YFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKV 1022 +FNQ M G A PG+ +L IN DK FAF+E RS++E + MA DGI F G +KV Sbjct: 203 FFNQQMHLCGLAQA-PGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKV 261 Query: 1023 RRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRE 1202 RRP DY PSQ ++N P S ++ ++IF+GGLP Y TE QV+E Sbjct: 262 RRPRDYQ--------PSQNTFDMN----SRMPVSTIVVDSANKIFIGGLPNYLTEDQVKE 309 Query: 1203 LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQ 1382 LL SFGPL+ F L D + GNSKGYAF Y D +TD A A LNG+++GDK L V+ A Sbjct: 310 LLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACA 368 Query: 1383 GTSQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTKVVCLTQVISADELRDDEEYEDILE 1562 +Q G T+++CL +++ DEL+ D+EYE+ILE Sbjct: 369 N------QQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILE 422 Query: 1563 DMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKFGGNQ 1742 D+R+E KYG + IPRP VPGVGKVF+E+A +A+ + GRKF Sbjct: 423 DVRDECSKYGIVRSLEIPRPYED--HPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRT 480 Query: 1743 VVAVFYPENKF 1775 VV +Y +K+ Sbjct: 481 VVTSYYDVDKY 491
>P90727:U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit - Caenorhabditis briggsae| Length = 488 Score = 226 bits (576), Expect = 3e-58 Identities = 138/340 (40%), Positives = 190/340 (55%) Frame = +3 Query: 774 TRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMR 953 T +RR+YVG +P NE+ + +FNQ M A PG+ +L IN DK FAF+E R Sbjct: 171 TCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCNLAQA-PGNPILLCQINLDKNFAFIEFR 229 Query: 954 SVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGG 1133 S++E + MA DGI F G +KVRRP DY PSQ ++N P S+ Sbjct: 230 SIDETTAGMAFDGINFMGQQLKVRRPRDYQ--------PSQNTFDMN----ARMPVSSIV 277 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++ ++IF+GGLP Y TE QV+ELL SFGPL+ F L D + GNSKGYAF Y D +TD Sbjct: 278 VDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTD 336 Query: 1314 IACAALNGIKMGDKTLTVRRANQGTSQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTKV 1493 A A LNG+++GDK L V+ A ++ G T++ Sbjct: 337 QAIAGLNGMQLGDKQLVVQLACANQTRHNTH------LPNSASAIAGIDLSQGAGRATEI 390 Query: 1494 VCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLE 1673 +CL +++ DELR DE+YE+ILED+REE KYG + IPRP VPGVGKVF+E Sbjct: 391 LCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVRSLEIPRPYDD--HPVPGVGKVFVE 448 Query: 1674 YADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKFTDGDYD 1793 +A +A+ + GRKF VV +Y +K+ + ++ Sbjct: 449 FATTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQFN 488
>P36629:U2AF2_SCHPO Splicing factor U2AF 59 kDa subunit - Schizosaccharomyces pombe| (Fission yeast) Length = 517 Score = 112 bits (279), Expect = 7e-24 Identities = 88/346 (25%), Positives = 156/346 (45%), Gaps = 2/346 (0%) Frame = +3 Query: 738 LVMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYI 917 ++ P + A+R ARR+ V G+P E + + + + +V + Sbjct: 183 IIAPPPPLQPGASRQARRLVVTGIPNEFVEDAFVSFIEDLFISTTYHKP-ETKHFSSVNV 241 Query: 918 NHDKKFAFVEMRSVEEASNAMALDGIMFEG-APVKVRRPTDY-NPSLAAALGPSQPNPNL 1091 ++ FA +E+ + E+A+ L + +K +R +Y P + + + + Sbjct: 242 CKEENFAILEVATPEDATFLWGLQSESYSNDVFLKFQRIQNYIVPQITPEVSQKRSDDYA 301 Query: 1092 NLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 1271 L+ D+I++ LP E QV ELL+ FG L F L+K+ G+SK Sbjct: 302 KNDV----------LDSKDKIYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSK 351 Query: 1272 GYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPRPEQETIXXXXXXXXXXX 1451 G+ FC +++ + ++A + L+G L + A G +Q ++ Sbjct: 352 GFCFCEFKNPSDAEVAISGLDGKDTYGNKLHAQFACVGLNQAMIDKSN------GMAILT 405 Query: 1452 XXXXXXGGALPTKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPS 1631 ++PT+V+ L +I+ DE+ D +EYEDI E ++ + YG L+ IPR + Sbjct: 406 ELAKASSQSIPTRVLQLHNLITGDEIMDVQEYEDIYESVKTQFSNYGPLIDIKIPRSIGT 465 Query: 1632 GAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPEN 1769 + + G GKVF+ Y+DI + A M G KF +V FY E+ Sbjct: 466 RNSGL-GTGKVFVRYSDIRSAEVAMEEMKGCKFNDRTIVIAFYGED 510
>Q8TAS1:UHMK1_HUMAN Serine/threonine-protein kinase Kist - Homo sapiens (Human)| Length = 419 Score = 81.6 bits (200), Expect = 1e-14 Identities = 43/102 (42%), Positives = 64/102 (62%) Frame = +3 Query: 1479 LPTKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVG 1658 LPT V+ L V+ D L ++EEYED++ED++EE +KYG +V ++P+ + PG G Sbjct: 318 LPTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPKEN-------PGRG 370 Query: 1659 KVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKFTDG 1784 +VF+EYA+ S A+ + GR F G VVA FYP + + G Sbjct: 371 QVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRG 412
>Q63285:UHMK1_RAT Serine/threonine-protein kinase Kist - Rattus norvegicus (Rat)| Length = 419 Score = 80.5 bits (197), Expect = 2e-14 Identities = 42/102 (41%), Positives = 64/102 (62%) Frame = +3 Query: 1479 LPTKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVG 1658 LPT V+ L V+ D L +++EYED++ED++EE +KYG +V ++P+ + PG G Sbjct: 318 LPTPVLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPKEN-------PGRG 370 Query: 1659 KVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKFTDG 1784 +VF+EYA+ S A+ + GR F G VVA FYP + + G Sbjct: 371 QVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRG 412
>P97343:UHMK1_MOUSE Serine/threonine-protein kinase Kist - Mus musculus (Mouse)| Length = 419 Score = 80.5 bits (197), Expect = 2e-14 Identities = 42/102 (41%), Positives = 64/102 (62%) Frame = +3 Query: 1479 LPTKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVG 1658 LPT V+ L V+ D L +++EYED++ED++EE +KYG +V ++P+ + PG G Sbjct: 318 LPTPVLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPKEN-------PGRG 370 Query: 1659 KVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKFTDG 1784 +VF+EYA+ S A+ + GR F G VVA FYP + + G Sbjct: 371 QVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRG 412
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 67.4 bits (163), Expect = 2e-10 Identities = 33/75 (44%), Positives = 42/75 (56%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG +PY TE Q++++ GP+ F LV DRETG KGY FC YQD A L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 1332 NGIKMGDKTLTVRRA 1376 NG + + L V A Sbjct: 78 NGREFSGRALRVDNA 92
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 67.4 bits (163), Expect = 2e-10 Identities = 33/75 (44%), Positives = 42/75 (56%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG +PY TE Q++++ GP+ F LV DRETG KGY FC YQD A L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 1332 NGIKMGDKTLTVRRA 1376 NG + + L V A Sbjct: 78 NGREFSGRALRVDNA 92
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 67.4 bits (163), Expect = 2e-10 Identities = 33/75 (44%), Positives = 42/75 (56%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG +PY TE Q++++ GP+ F LV DRETG KGY FC YQD A L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 1332 NGIKMGDKTLTVRRA 1376 NG + + L V A Sbjct: 78 NGREFSGRALRVDNA 92
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 67.4 bits (163), Expect = 2e-10 Identities = 33/75 (44%), Positives = 42/75 (56%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG +PY TE Q++++ GP+ F LV DRETG KGY FC YQD A L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 1332 NGIKMGDKTLTVRRA 1376 NG + + L V A Sbjct: 78 NGREFSGRALRVDNA 92
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 67.0 bits (162), Expect = 3e-10 Identities = 48/154 (31%), Positives = 68/154 (44%) Frame = +3 Query: 927 KKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAV 1106 K A+VE V A+ L G G P+ V+ + + AAA+ A Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQA-SQAEKNRAAAM------------AN 240 Query: 1107 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 1286 L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F Sbjct: 241 NLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296 Query: 1287 VYQDLNVTDIACAALNGIKMGDKTLTVRRANQGT 1388 + D A LNG ++ + + V + T Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERT 330 Score = 32.0 bits (71), Expect = 9.7 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = +3 Query: 1551 DILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKF 1730 +I +D+ EE K+G ++ + + G V+++ I + A +HGR F Sbjct: 439 EIKDDVIEECNKHGGVIHIYVDKNSAQG--------NVYVKCPSIAAAIAAVNALHGRWF 490 Query: 1731 GGNQVVAVFYP 1763 G + A + P Sbjct: 491 AGKMITAAYVP 501
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 67.0 bits (162), Expect = 3e-10 Identities = 48/154 (31%), Positives = 68/154 (44%) Frame = +3 Query: 927 KKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAV 1106 K A+VE V A+ L G G P+ V+ + + AAA+ A Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQA-SQAEKNRAAAM------------AN 240 Query: 1107 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 1286 L GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F Sbjct: 241 NLQKGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296 Query: 1287 VYQDLNVTDIACAALNGIKMGDKTLTVRRANQGT 1388 + D A LNG ++ + + V + T Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERT 330 Score = 32.0 bits (71), Expect = 9.7 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = +3 Query: 1551 DILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKF 1730 +I +D+ EE K+G ++ + + G V+++ I + A +HGR F Sbjct: 445 EIKDDVIEECNKHGGVIHIYVDKNSAQG--------NVYVKCPSIAAAIAAVNALHGRWF 496 Query: 1731 GGNQVVAVFYP 1763 G + A + P Sbjct: 497 AGKMITAAYVP 507
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 65.9 bits (159), Expect = 6e-10 Identities = 47/151 (31%), Positives = 67/151 (44%) Frame = +3 Query: 936 AFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLT 1115 A+VE V A+ L G G P+ V+ + + AAA+ A L Sbjct: 197 AYVEFVDVSSVRLAIGLTGQRVLGVPIIVQA-SQAEKNRAAAM------------ANNLQ 243 Query: 1116 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 1295 GSAG P R++VG L + TE +R + E FG + L+ D ETG SKGY F + Sbjct: 244 KGSAG----PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFS 299 Query: 1296 DLNVTDIACAALNGIKMGDKTLTVRRANQGT 1388 D A LNG ++ + + V + T Sbjct: 300 DSECAKKALEQLNGFELAGRPMKVGHVTERT 330 Score = 32.0 bits (71), Expect = 9.7 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = +3 Query: 1551 DILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKF 1730 +I +D+ EE K+G ++ + + G V+++ I + A +HGR F Sbjct: 445 EIKDDVIEECNKHGGVIHIYVDKNSAQG--------NVYVKCPSIAAAIAAVNALHGRWF 496 Query: 1731 GGNQVVAVFYP 1763 G + A + P Sbjct: 497 AGKMITAAYVP 507
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 64.7 bits (156), Expect = 1e-09 Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 4/164 (2%) Frame = +3 Query: 927 KKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAV 1106 K A+VE ++ A+ L G G P+ V+ LAA Q Sbjct: 207 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQK--------- 257 Query: 1107 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 1286 G GP R++VG L + TE +R + E FG + L+KD +TG SKGY F Sbjct: 258 --------GNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFI 309 Query: 1287 VYQDLNVTDIACAALNGIKMGDKTLTV----RRANQGTSQPRPE 1406 + D A LNG ++ + + V R + GT P+ Sbjct: 310 TFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPD 353
>O43040:CTF1_SCHPO Cleavage and termination factor 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 363 Score = 64.3 bits (155), Expect = 2e-09 Identities = 29/72 (40%), Positives = 43/72 (59%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG +PY +E Q+ E+ GP++ F LV D ETG+ KGY FC + D T +A L Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKL 68 Query: 1332 NGIKMGDKTLTV 1367 N ++G + + V Sbjct: 69 NNSELGPRKIRV 80
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 64.3 bits (155), Expect = 2e-09 Identities = 32/75 (42%), Positives = 41/75 (54%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG +PY TE Q++++ G + F LV DRETG KGY FC YQD A L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 1332 NGIKMGDKTLTVRRA 1376 NG + + L V A Sbjct: 78 NGREFSGRALRVDNA 92
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 64.3 bits (155), Expect = 2e-09 Identities = 32/75 (42%), Positives = 41/75 (54%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG +PY TE Q++++ G + F LV DRETG KGY FC YQD A L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 1332 NGIKMGDKTLTVRRA 1376 NG + + L V A Sbjct: 78 NGREFSGRALRVDNA 92
>Q8R0F5:RBMX2_MOUSE RNA-binding motif protein, X-linked 2 - Mus musculus (Mouse)| Length = 326 Score = 63.9 bits (154), Expect = 2e-09 Identities = 30/72 (41%), Positives = 44/72 (61%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IFVGGLPY TE + + +G + +LV+D++TG SKG+ F Y+D T +A Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97 Query: 1332 NGIKMGDKTLTV 1367 NGIK+ +T+ V Sbjct: 98 NGIKIKGRTIRV 109
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 62.8 bits (151), Expect = 5e-09 Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 2/197 (1%) Frame = +3 Query: 792 VYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS 971 VYVGGL +E + F Q + NT P D V + + + FVE S E+A Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVV--NTHMPKDRVTGQH----QGYGFVEFLSEEDAD 68 Query: 972 NAMAL-DGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD 1148 A+ + + I G P++V + + +N NL++GA Sbjct: 69 YAIKIMNMIKLYGKPIRVNKASAHNK-------------NLDVGA--------------- 100 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGP-LRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 IF+G L E + + +FG L+ +++D +TGNSKGYAF + + +D A Sbjct: 101 NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIE 160 Query: 1326 ALNGIKMGDKTLTVRRA 1376 A+NG + ++ +TV A Sbjct: 161 AMNGQYLCNRPITVSYA 177 Score = 44.3 bits (103), Expect = 0.002 Identities = 25/76 (32%), Positives = 38/76 (50%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++VGGL +E + EL GP+ + KDR TG +GY F + D A + Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74 Query: 1332 NGIKMGDKTLTVRRAN 1379 N IK+ K + V +A+ Sbjct: 75 NMIKLYGKPIRVNKAS 90
>Q9Y388:RBMX2_HUMAN RNA-binding motif protein, X-linked 2 - Homo sapiens (Human)| Length = 322 Score = 62.8 bits (151), Expect = 5e-09 Identities = 29/72 (40%), Positives = 44/72 (61%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IF+GGLPY TE + + +G + +LV+D++TG SKG+ F Y+D T +A Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97 Query: 1332 NGIKMGDKTLTV 1367 NGIK+ +T+ V Sbjct: 98 NGIKIKGRTIRV 109
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 61.6 bits (148), Expect = 1e-08 Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 1/208 (0%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 +++VG LP + + +A F+ + + N + + F FV M +VEEA Sbjct: 56 KLFVGNLPYDVDSEKLAGIFD------AAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEA 109 Query: 969 SNAMAL-DGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 A+ L +G +G + V + AA G + P G E Sbjct: 110 EKAVELLNGYDMDGRQLTVNK--------AAPRGSPERAPR-------------GDFEPS 148 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 R++VG LP+ +++ +L G + +V DRETG S+G+ F + + A A Sbjct: 149 CRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIA 208 Query: 1326 ALNGIKMGDKTLTVRRANQGTSQPRPEQ 1409 AL+G +TL R ++ RP + Sbjct: 209 ALDG-----QTLDGRAVRVNVAEERPRR 231
>Q62176:RBM38_MOUSE RNA-binding protein 38 - Mus musculus (Mouse)| Length = 237 Score = 60.8 bits (146), Expect = 2e-08 Identities = 30/69 (43%), Positives = 40/69 (57%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGGLPY+ T+A +R+ E FG + ++ DR+TG S+GY F D D AC Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 1329 LNGIKMGDK 1355 N I G K Sbjct: 93 PNPIIDGRK 101
>Q76LC6:RBM24_DANRE RNA-binding protein 24 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 230 Score = 60.1 bits (144), Expect = 3e-08 Identities = 29/69 (42%), Positives = 41/69 (59%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGGLPY+ T++ +R+ E FG + ++ DR+TG S+GY F D + D AC Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71 Query: 1329 LNGIKMGDK 1355 N I G K Sbjct: 72 PNPIIDGRK 80
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 60.1 bits (144), Expect = 3e-08 Identities = 41/112 (36%), Positives = 53/112 (47%) Frame = +3 Query: 1065 GPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLV 1244 GP+ PN L LG G T S L V LP T+ + + L S G + LV Sbjct: 19 GPALPNGPL-LGTNGATDDSKTNL------IVNYLPQNMTQDEFKSLFGSIGDIESCKLV 71 Query: 1245 KDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPR 1400 +D+ TG S GY F Y D N D A LNG+K+ KT+ V A ++ R Sbjct: 72 RDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIR 123 Score = 46.2 bits (108), Expect = 5e-04 Identities = 32/107 (29%), Positives = 51/107 (47%) Frame = +3 Query: 1047 SLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 1226 SL A P + L VGL+ G+AG IFV L E+ + +L FG + Sbjct: 254 SLIARFSPIAIDGMSGLAGVGLSGGAAGA---GWCIFVYNLSPEADESVLWQLFGPFGAV 310 Query: 1227 RGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTV 1367 +++D T KG+ F + + +A A+LNG ++G++ L V Sbjct: 311 TNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQV 357 Score = 35.0 bits (79), Expect = 1.1 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP ++ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 1332 NGIKM--GDKTLTVRRANQGTSQPRPEQET 1415 NG K + +TV+ AN P Q+T Sbjct: 187 NGQKPLGAAEPITVKFAN------NPSQKT 210
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 60.1 bits (144), Expect = 3e-08 Identities = 41/112 (36%), Positives = 53/112 (47%) Frame = +3 Query: 1065 GPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLV 1244 GP+ PN L LG G T S L V LP T+ + + L S G + LV Sbjct: 19 GPALPNGPL-LGTNGATDDSKTNL------IVNYLPQNMTQDEFKSLFGSIGDIESCKLV 71 Query: 1245 KDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPR 1400 +D+ TG S GY F Y D N D A LNG+K+ KT+ V A ++ R Sbjct: 72 RDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIR 123 Score = 46.2 bits (108), Expect = 5e-04 Identities = 32/107 (29%), Positives = 51/107 (47%) Frame = +3 Query: 1047 SLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 1226 SL A P + L VGL+ G+AG IFV L E+ + +L FG + Sbjct: 254 SLIARFSPIAIDGMSGLAGVGLSGGAAGA---GWCIFVYNLSPEADESVLWQLFGPFGAV 310 Query: 1227 RGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTV 1367 +++D T KG+ F + + +A A+LNG ++G++ L V Sbjct: 311 TNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQV 357 Score = 34.7 bits (78), Expect = 1.5 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP ++ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 1332 NGIKM--GDKTLTVRRANQGTSQPRPEQET 1415 NG K + +TV+ AN P Q+T Sbjct: 187 NGQKPLGAAEPITVKFAN------NPSQKT 210
>Q9H0Z9:RBM38_HUMAN RNA-binding protein 38 - Homo sapiens (Human)| Length = 216 Score = 59.3 bits (142), Expect = 6e-08 Identities = 29/69 (42%), Positives = 40/69 (57%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGGLPY+ T+A +R+ E FG + ++ DR+TG S+GY F D + AC Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 1329 LNGIKMGDK 1355 N I G K Sbjct: 72 PNPIIDGRK 80
>Q9BX46:RBM24_HUMAN RNA-binding protein 24 - Homo sapiens (Human)| Length = 236 Score = 58.5 bits (140), Expect = 1e-07 Identities = 29/69 (42%), Positives = 40/69 (57%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGGLPY+ T+A +R+ E FG + ++ DR+TG S+GY F D + AC Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 1329 LNGIKMGDK 1355 N I G K Sbjct: 72 PNPIIDGRK 80
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 58.2 bits (139), Expect = 1e-07 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 1/199 (0%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 +++VG L N Q +A+ F Q T + + N + + F FV M SV+EA Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQA------GTVEIAEVIYNRETDQSRGFGFVTMSSVDEA 204 Query: 969 SNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD 1148 A+ K R D N L + + P G P A + P Sbjct: 205 ETAVE-----------KFNR-YDLNGRLLT-VNKAAPR--------GSRPERAPRVYEPA 243 Query: 1149 -RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 R++VG LP+ ++ +L G + +V DRETG S+G+ F D++ + A + Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303 Query: 1326 ALNGIKMGDKTLTVRRANQ 1382 AL+G + + + V A + Sbjct: 304 ALDGQNLEGRAIRVNVAEE 322 Score = 42.0 bits (97), Expect = 0.009 Identities = 22/83 (26%), Positives = 39/83 (46%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVG L Y + L E G + +++ +RET S+G+ F ++ + A Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210 Query: 1329 LNGIKMGDKTLTVRRANQGTSQP 1397 N + + LTV +A S+P Sbjct: 211 FNRYDLNGRLLTVNKAAPRGSRP 233
>Q8JZX4:SPF45_MOUSE Splicing factor 45 - Mus musculus (Mouse)| Length = 405 Score = 57.8 bits (138), Expect = 2e-07 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Frame = +3 Query: 1482 PTKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPR-PDPSGAAAVPGVG 1658 PTKVV L ++ A E+ +D E E +EE KYG + K VI P AV Sbjct: 307 PTKVVLLRNMVGAGEVDEDLEVET-----KEECEKYGKVGKCVIFEIPGAPDDEAV---- 357 Query: 1659 KVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKF 1775 ++FLE+ ++ + KA V ++GR FGG V A FY +KF Sbjct: 358 RIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKF 396
>Q96I25:SPF45_HUMAN Splicing factor 45 - Homo sapiens (Human)| Length = 401 Score = 57.8 bits (138), Expect = 2e-07 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Frame = +3 Query: 1482 PTKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPR-PDPSGAAAVPGVG 1658 PTKVV L ++ A E+ +D E E +EE KYG + K VI P AV Sbjct: 303 PTKVVLLRNMVGAGEVDEDLEVET-----KEECEKYGKVGKCVIFEIPGAPDDEAV---- 353 Query: 1659 KVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKF 1775 ++FLE+ ++ + KA V ++GR FGG V A FY +KF Sbjct: 354 RIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKF 392
>P25299:RNA15_YEAST mRNA 3'-end-processing protein RNA15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 296 Score = 57.8 bits (138), Expect = 2e-07 Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 4/90 (4%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +++G +PY TE Q+ +L + GP+ ++ D +TG SKGYAF ++DL + A L Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79 Query: 1332 NGIKMGDKTLTVRRAN----QGTSQPRPEQ 1409 NG ++G + L ++ G SQ + +Q Sbjct: 80 NGYQLGSRFLKCGYSSNSDISGVSQQQQQQ 109
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 57.4 bits (137), Expect = 2e-07 Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 9/266 (3%) Frame = +3 Query: 612 PSQAIPMVTPGTTPGQLPAVAPLITGMLPNMFNFTAPTQFNPLVMQPQAMTQQATRHARR 791 PS ++ + ++ G ++ P + + A + F+ L + Q + Sbjct: 34 PSSSLNLSLSSSSIGHSASIKPFESSFSTRV----ALSDFDQLEDDVEVAEQPRFSEDLK 89 Query: 792 VYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVY---INHDKKFAFVEMRSVE 962 ++VG LP + + +A F + AG + V +Y + F FV M + E Sbjct: 90 LFVGNLPFSVDSAALAGLFER---------AGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140 Query: 963 EASNA-MALDGIMFEGAPVKVRR-PTDYNPSLAAALGPSQPNPNLNLGAVGLTP--GSAG 1130 E A +G +G ++V P ++ G N + G G + G+ G Sbjct: 141 EVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARG 200 Query: 1131 G--LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLN 1304 G ++ +R++VG L + + ++EL G + +V DR++G S+G+ F Y Sbjct: 201 GRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAK 260 Query: 1305 VTDIACAALNGIKMGDKTLTVRRANQ 1382 + A +LNGI + +++ V A + Sbjct: 261 EVNDAIDSLNGIDLDGRSIRVSAAEE 286
>Q6P8A7:RBM24_XENTR RNA-binding protein 24 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 226 Score = 57.4 bits (137), Expect = 2e-07 Identities = 28/69 (40%), Positives = 40/69 (57%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGGLPY+ T++ +R+ E FG + ++ DR+TG S+GY F D + AC Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 1329 LNGIKMGDK 1355 N I G K Sbjct: 72 PNPIIDGRK 80
>Q5ZMA3:RBM24_CHICK RNA-binding protein 24 - Gallus gallus (Chicken)| Length = 225 Score = 57.4 bits (137), Expect = 2e-07 Identities = 28/69 (40%), Positives = 40/69 (57%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGGLPY+ T++ +R+ E FG + ++ DR+TG S+GY F D + AC Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 1329 LNGIKMGDK 1355 N I G K Sbjct: 72 PNPIIDGRK 80
>Q9I8B3:RB24B_XENLA RNA-binding protein 24-B - Xenopus laevis (African clawed frog)| Length = 224 Score = 57.4 bits (137), Expect = 2e-07 Identities = 28/69 (40%), Positives = 40/69 (57%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGGLPY+ T++ +R+ E FG + ++ DR+TG S+GY F D + AC Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 1329 LNGIKMGDK 1355 N I G K Sbjct: 72 PNPIIDGRK 80
>Q6GQD3:RB24A_XENLA RNA-binding protein 24-A - Xenopus laevis (African clawed frog)| Length = 225 Score = 57.4 bits (137), Expect = 2e-07 Identities = 28/69 (40%), Positives = 40/69 (57%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGGLPY+ T++ +R+ E FG + ++ DR+TG S+GY F D + AC Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 1329 LNGIKMGDK 1355 N I G K Sbjct: 72 PNPIIDGRK 80
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 55.8 bits (133), Expect = 6e-07 Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 7/215 (3%) Frame = +3 Query: 753 QAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHD-- 926 Q QQA RVYVG + E T+ + F P + ++ ++ D Sbjct: 119 QVQRQQALALMCRVYVGSISFELKEDTIRVAFT------------PFGPIKSINMSWDPI 166 Query: 927 ----KKFAFVEMRSVEEASNAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL 1091 K FAFVE E A A+ ++G + G +KV RP++ P + Q Sbjct: 167 TQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKVGRPSNM-PQAQQVIDEVQEEA-- 223 Query: 1092 NLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 1271 + +RI+V + +E ++ + E+FGP+ L + K Sbjct: 224 ---------------KSFNRIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHK 268 Query: 1272 GYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRA 1376 GY F Y + D A A++N +G + L V R+ Sbjct: 269 GYGFIEYANKQAMDEAIASMNLFDLGGQLLRVGRS 303 Score = 45.8 bits (107), Expect = 6e-04 Identities = 24/87 (27%), Positives = 43/87 (49%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R++VG + + E +R FGP++ ++ D T KG+AF Y+ +A Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRPEQ 1409 +NG MG + + V R ++ P+ +Q Sbjct: 191 MNGALMGGRNIKVGRP---SNMPQAQQ 214 Score = 41.6 bits (96), Expect = 0.012 Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 3/104 (2%) Frame = +3 Query: 1485 TKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVI---PRPDPSGAAAVPGV 1655 ++V+ L ++ +++ E + E+++EE K+G + + +I + + + Sbjct: 536 SRVIILRNMVGPEDVD-----ETLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEII 590 Query: 1656 GKVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKFTDGD 1787 K+F+E++ + + K + GR FGG +VVA Y + F GD Sbjct: 591 VKIFVEFSAGAEAMRGKEALDGRFFGGRRVVAELYDQGIFDQGD 634
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 55.8 bits (133), Expect = 6e-07 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 8/215 (3%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSVE 962 +++VGGL + ++T+ YF+Q + D V+ + N + F FV+ + Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVV--------DCVIMKDKTTNQSRGFGFVKFKDPN 62 Query: 963 EASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEG 1142 +A +G R D P + P + P G G Sbjct: 63 CVGTVLASRPHTLDG------RNIDPKPCTPRGMQPERTRPK-----EGWQKGPRSDSSK 111 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 ++IFVGG+P+ E ++RE + FG + ++ D E +G+ F ++D D A Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171 Query: 1323 AALNGIKMGDKTLTVRRA------NQGTSQPRPEQ 1409 MG K + V+RA NQ QP Q Sbjct: 172 NMHFHDIMG-KKVEVKRAEPRDSKNQAPGQPGASQ 205 Score = 42.7 bits (99), Expect = 0.005 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Frame = +3 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 1301 ++ G + ++FVGGL + T+ +R +G + ++KD+ T S+G+ F ++D Sbjct: 2 NSAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 61 Query: 1302 NVTDIACAA----LNGIKMGDKTLTVRRANQGTSQPR 1400 N A+ L+G + K T R ++P+ Sbjct: 62 NCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPK 98
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 55.5 bits (132), Expect = 8e-07 Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 6/204 (2%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 +++VG LP + + +A F + GN + + + + F FV M + EE Sbjct: 88 KLFVGNLPFSVDSAALAGLFERA-----GNVEMV-EVIYDKLTGRSRGFGFVTMSTKEEV 141 Query: 969 SNA-MALDGIMFEGAPVKVRR-PTDYNPSLAAALGPSQPNPNLNLGAVGLTP--GSAGG- 1133 A +G +G ++V P ++ G N + G G + G+ GG Sbjct: 142 EAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGR 201 Query: 1134 -LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 ++ +R++VG L + + ++EL G + +V DR++G S+G+ F Y Sbjct: 202 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261 Query: 1311 DIACAALNGIKMGDKTLTVRRANQ 1382 + A +LNG+ + +++ V A + Sbjct: 262 NDAIDSLNGVDLDGRSIRVSAAEE 285
>Q3SZM1:MK67I_BOVIN MKI67 FHA domain-interacting nucleolar phosphoprotein - Bos taurus| (Bovine) Length = 296 Score = 55.1 bits (131), Expect = 1e-06 Identities = 27/73 (36%), Positives = 39/73 (53%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P I+VG LP E Q+R FG + F L + ++TGNSKGY F ++ +V IA Sbjct: 44 PGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAA 103 Query: 1323 AALNGIKMGDKTL 1361 +N G++ L Sbjct: 104 ETMNNYLFGERLL 116
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 53.9 bits (128), Expect = 2e-06 Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 1/199 (0%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 R+YVG LP + ++ F + T + V + + + FAFV M SVEEA Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEA------GTVANVEIVYDRVTDRSRGFAFVTMGSVEEA 168 Query: 969 SNAMAL-DGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 A+ L DG G VKV P + + + G ++ P Sbjct: 169 KEAIRLFDGSQVGGRTVKVNFP------------EVPRGGEREVMSAKIRSTYQGFVDSP 216 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 +++V L + T +R+ ++ DR +G S+G+ F + + A Sbjct: 217 HKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALD 276 Query: 1326 ALNGIKMGDKTLTVRRANQ 1382 +N +++ + L + A Q Sbjct: 277 TMNEVELEGRPLRLNVAGQ 295
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 53.9 bits (128), Expect = 2e-06 Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 14/210 (6%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVY---INHDKKFAFVEMRSV 959 +++VG LP + +A F +AG + V +Y + F FV M SV Sbjct: 92 KLFVGNLPFNVDSAQLAQLFE---------SAGNVEMVEVIYDKITGRSRGFGFVTMSSV 142 Query: 960 EEA-SNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPN--------PNLNLGAVGL 1112 E + A +G +G P++V GP P P + G+ G Sbjct: 143 SEVEAAAQQFNGYELDGRPLRVNA------------GPPPPKREDGFSRGPRSSFGSSGS 190 Query: 1113 TPGSAGG--LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 1286 G GG +R++VG L + + + L G + ++ DR++G SKG+ F Sbjct: 191 GYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFV 250 Query: 1287 VYQDLNVTDIACAALNGIKMGDKTLTVRRA 1376 Y A +L+G + + + V A Sbjct: 251 TYDSSQEVQNAIKSLDGADLDGRQIRVSEA 280 Score = 52.4 bits (124), Expect = 7e-06 Identities = 28/103 (27%), Positives = 48/103 (46%) Frame = +3 Query: 1098 GAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 1277 G + P ++FVG LP+ AQ+ +L ES G + +++ D+ TG S+G+ Sbjct: 75 GFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGF 134 Query: 1278 AFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPRPE 1406 F ++ + A NG ++ + L R N G P+ E Sbjct: 135 GFVTMSSVSEVEAAAQQFNGYELDGRPL---RVNAGPPPPKRE 174
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 53.9 bits (128), Expect = 2e-06 Identities = 61/240 (25%), Positives = 94/240 (39%), Gaps = 48/240 (20%) Frame = +3 Query: 792 VYVGGLPPTANEQTV--------AIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 947 +YV GLP T +Q + AI ++++ G +T G +I DK+ Sbjct: 286 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG----FIRFDKR----- 336 Query: 948 MRSVEEASNAM-ALDG-----------IMFEGAP------VKVRRPTDYNPSLAAALGPS 1073 EEA+ A+ AL+G + F P ++ + P NP L +G + Sbjct: 337 ----EEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGA 392 Query: 1074 QPNPNLNLGAVGLTPGS----------------------AGGLEGPDRIFVGGLPYYFTE 1187 P +N G +P + A G G IF+ L E Sbjct: 393 MHTP-VNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEE 451 Query: 1188 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTV 1367 A + +L FG ++ +VKD T KGY F + + +A ALNG MG++ L V Sbjct: 452 AALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQV 511 Score = 47.8 bits (112), Expect = 2e-04 Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 13/111 (11%) Frame = +3 Query: 1074 QPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDR 1253 Q N N N G G GS G E + V LP TE ++R L S G + L++D+ Sbjct: 163 QANTNGNSG--GAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDK 220 Query: 1254 ET-------------GNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTV 1367 G S GY F Y + A LNG+++ +KT+ V Sbjct: 221 SQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKV 271
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 53.9 bits (128), Expect = 2e-06 Identities = 61/240 (25%), Positives = 94/240 (39%), Gaps = 48/240 (20%) Frame = +3 Query: 792 VYVGGLPPTANEQTV--------AIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 947 +YV GLP T +Q + AI ++++ G +T G +I DK+ Sbjct: 250 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG----FIRFDKR----- 300 Query: 948 MRSVEEASNAM-ALDG-----------IMFEGAP------VKVRRPTDYNPSLAAALGPS 1073 EEA+ A+ AL+G + F P ++ + P NP L +G + Sbjct: 301 ----EEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGA 356 Query: 1074 QPNPNLNLGAVGLTPGS----------------------AGGLEGPDRIFVGGLPYYFTE 1187 P +N G +P + A G G IF+ L E Sbjct: 357 MHTP-VNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEE 415 Query: 1188 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTV 1367 A + +L FG ++ +VKD T KGY F + + +A ALNG MG++ L V Sbjct: 416 AALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQV 475 Score = 52.0 bits (123), Expect = 9e-06 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 13/112 (11%) Frame = +3 Query: 1071 SQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKD 1250 +QPN N N G+ G GS G E + V LP TE ++R L S G + L++D Sbjct: 125 AQPNTNGNAGS-GSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRD 183 Query: 1251 RET-------------GNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTV 1367 + G S GY F Y + A LNG+++ +KT+ V Sbjct: 184 KSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKV 235
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 53.5 bits (127), Expect = 3e-06 Identities = 49/196 (25%), Positives = 79/196 (40%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 +++VG LP + + +A F Q + + N + + F FV M +VEEA Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQA------GVVEIAEVIYNRDTDQSRGFGFVTMSTVEEA 190 Query: 969 SNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD 1148 A+ M+ V R T N + P +P E Sbjct: 191 EKAVE----MYNRYDVNGRLLT-VNKAARRGERPERPPRTF---------------EQSY 230 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 RI+VG +P+ +A++ +L G + +V DRETG S+G+ F A A Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 290 Query: 1329 LNGIKMGDKTLTVRRA 1376 L+G + +T+ V A Sbjct: 291 LDGQSLDGRTIRVNVA 306 Score = 40.8 bits (94), Expect = 0.021 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVG LPY + L E G + +++ +R+T S+G+ F + + A Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRPEQET 1415 N + + LTV +A + +P T Sbjct: 197 YNRYDVNGRLLTVNKAARRGERPERPPRT 225
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 53.5 bits (127), Expect = 3e-06 Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 2/209 (0%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSVE 962 +++VGGL + ++T+ YF+Q + D V+ + N + F FV+ + Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVV--------DCVIMKDKTTNQSRGFGFVKFKDPN 62 Query: 963 EASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEG 1142 +A +G R D P + P + P G G Sbjct: 63 CVGTVLASRPHTLDG------RNIDPKPCTPRGMQPERTRPK-----EGWQKGPRSDNSK 111 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 ++IFVGG+P+ E ++RE + FG + ++ D E +G+ F ++D D A Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171 Query: 1323 AALNGIKMGDKTLTVRRANQGTSQPRPEQ 1409 MG K R + + P Q Sbjct: 172 NMHFHDIMGKKVEVKRAEPRDSKSQAPGQ 200 Score = 42.0 bits (97), Expect = 0.009 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 G + ++FVGGL + T+ +R +G + ++KD+ T S+G+ F ++D N Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64 Query: 1311 DIACAA----LNGIKMGDKTLTVRRANQGTSQPR 1400 A+ L+G + K T R ++P+ Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPK 98
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 53.1 bits (126), Expect = 4e-06 Identities = 25/84 (29%), Positives = 45/84 (53%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + +A +R+ FG + ++ DRETG S+G+ F + D A + Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPR 1400 ++G ++ + + V AN S PR Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPR 119
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 52.8 bits (125), Expect = 5e-06 Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 1/197 (0%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 +++VG LP +A+ +A F + GN + + + + F FV M S EE Sbjct: 88 KIFVGNLPFSADSAALAELFERA-----GNVEMV-EVIYDKLTGRSRGFGFVTMSSKEEV 141 Query: 969 SNA-MALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 A +G +G ++V GP P N G + G G + Sbjct: 142 EAACQQFNGYELDGRALRVNS------------GPP-PEKRENSSFRGGSRGG-GSFDSS 187 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 +R++VG L + + + L G + +V DR++G S+G+ F Y + A Sbjct: 188 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 247 Query: 1326 ALNGIKMGDKTLTVRRA 1376 +L+G+ + + + V A Sbjct: 248 SLDGVDLNGRAIRVSPA 264 Score = 50.4 bits (119), Expect = 3e-05 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Frame = +3 Query: 1143 PD-RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 PD +IFVG LP+ A + EL E G + +++ D+ TG S+G+ F + A Sbjct: 85 PDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144 Query: 1320 CAALNGIKMGDKTLTVRRANQGTSQPRPEQ 1409 C NG ++ + L R N G P PE+ Sbjct: 145 CQQFNGYELDGRAL---RVNSG---PPPEK 168
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 52.4 bits (124), Expect = 7e-06 Identities = 25/76 (32%), Positives = 41/76 (53%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R FVGGL + +A++ FG + ++ DRETG S+G+ F ++D A Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 1329 LNGIKMGDKTLTVRRA 1376 +NG ++ +T+TV A Sbjct: 67 MNGKELDGRTITVNEA 82
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 52.4 bits (124), Expect = 7e-06 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 1059 ALGPSQPNPNLNLGAVGLTPGSAGGLE-GPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 1235 A GP+ N N + +P +G E + V LP T+ +++ L S G + Sbjct: 15 ANGPTTVNNNCS------SPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESC 68 Query: 1236 DLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPR 1400 LV+D+ TG S GY F Y D + A LNG+++ KT+ V A ++ R Sbjct: 69 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123 Score = 40.0 bits (92), Expect = 0.036 Identities = 21/72 (29%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IFV L E+ + ++ FG + +++D T KG+ F + + +A A+L Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338 Query: 1332 NGIKMGDKTLTV 1367 NG ++GD+ L V Sbjct: 339 NGYRLGDRVLQV 350 Score = 37.4 bits (85), Expect = 0.23 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP T+ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 1332 NGIKMGDKT--LTVRRANQGTSQPRPEQET 1415 NG K T +TV+ AN P Q+T Sbjct: 187 NGQKPPGATEPITVKFAN------NPSQKT 210
>Q6PFR5:TRA2A_MOUSE Transformer-2 protein homolog - Mus musculus (Mouse)| Length = 281 Score = 52.0 bits (123), Expect = 9e-06 Identities = 24/70 (34%), Positives = 42/70 (60%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V GL Y TE +RE+ +GPL G ++V D+ TG S+G+AF ++ ++ + A NG Sbjct: 121 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG 180 Query: 1338 IKMGDKTLTV 1367 +++ + + V Sbjct: 181 MELDGRRIRV 190
>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)| Length = 282 Score = 52.0 bits (123), Expect = 9e-06 Identities = 24/70 (34%), Positives = 42/70 (60%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V GL Y TE +RE+ +GPL G ++V D+ TG S+G+AF ++ ++ + A NG Sbjct: 123 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG 182 Query: 1338 IKMGDKTLTV 1367 +++ + + V Sbjct: 183 MELDGRRIRV 192
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 52.0 bits (123), Expect = 9e-06 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%) Frame = +3 Query: 1065 GPSQPNPNLNLGAVGLTPGS------AGGLEGPDR-IFVGGLPYYFTEAQVRELLESFGP 1223 GP N + GA G T GS A G DR +FVGGL + TE ++R+ +G Sbjct: 24 GPGSENGDA--GAAGSTNGSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGE 81 Query: 1224 LRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA----LNGIKMGDKTLTVR 1370 + ++ D +TG S+G+AF V+ + D AA +N K+ K R Sbjct: 82 IESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKAR 134 Score = 35.4 bits (80), Expect = 0.88 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY-QDLNVTDIACA 1325 +IFVGGL ++ +++ FG + ++ D++ KG+ F + + VTD+ Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196 Query: 1326 ALNGIKMGDKTLTVRRANQGTSQPRPEQE 1412 K+ K + V+RA P+PE + Sbjct: 197 PKQ--KIAGKEVDVKRAT-----PKPENQ 218
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 52.0 bits (123), Expect = 9e-06 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 2/197 (1%) Frame = +3 Query: 792 VYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS 971 +YVGGL +E + Q + N P D V NH + F FVE E+A Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNM--PKDRVT---ANH-QGFGFVEFMGEEDAD 68 Query: 972 NAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD 1148 A+ L+ I G P+KV + + + N+++GA Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEK-------------NMDVGA--------------- 100 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGP-LRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 IFVG L E + + +FG L+ +++D ++G SKG+AF + +D A Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160 Query: 1326 ALNGIKMGDKTLTVRRA 1376 A+NG + ++ +TV A Sbjct: 161 AMNGQFLCNRAITVSYA 177 Score = 47.0 bits (110), Expect = 3e-04 Identities = 26/76 (34%), Positives = 41/76 (53%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I+VGGL +E+ + EL+ GP+ ++ KDR T N +G+ F + D A L Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74 Query: 1332 NGIKMGDKTLTVRRAN 1379 N IK+ K + V +A+ Sbjct: 75 NMIKLYGKPIKVNKAS 90
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 52.0 bits (123), Expect = 9e-06 Identities = 26/84 (30%), Positives = 43/84 (51%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVGGL + E + + SFGP+ +VKDRET S+G+ F + + +A A Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPR 1400 +NG + + + V A + R Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 52.0 bits (123), Expect = 9e-06 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 1059 ALGPSQPNPNLNLGAVGLTPGSAGGLE-GPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 1235 A GP+ N N + +P +G E + V LP T+ +++ L S G + Sbjct: 15 ANGPTTINNNCS------SPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESC 68 Query: 1236 DLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPR 1400 LV+D+ TG S GY F Y D + A LNG+++ KT+ V A ++ R Sbjct: 69 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123 Score = 40.0 bits (92), Expect = 0.036 Identities = 21/72 (29%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IFV L E+ + ++ FG + +++D T KG+ F + + +A A+L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 1332 NGIKMGDKTLTV 1367 NG ++GD+ L V Sbjct: 338 NGYRLGDRVLQV 349 Score = 37.4 bits (85), Expect = 0.23 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP T+ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 1332 NGIKMGDKT--LTVRRANQGTSQPRPEQET 1415 NG K T +TV+ AN P Q+T Sbjct: 187 NGQKPPGATEPITVKFAN------NPSQKT 210
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 52.0 bits (123), Expect = 9e-06 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 1059 ALGPSQPNPNLNLGAVGLTPGSAGGLE-GPDRIFVGGLPYYFTEAQVRELLESFGPLRGF 1235 A GP+ N N + +P +G E + V LP T+ +++ L S G + Sbjct: 15 ANGPTTINNNCS------SPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESC 68 Query: 1236 DLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPR 1400 LV+D+ TG S GY F Y D + A LNG+++ KT+ V A ++ R Sbjct: 69 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123 Score = 40.0 bits (92), Expect = 0.036 Identities = 21/72 (29%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IFV L E+ + ++ FG + +++D T KG+ F + + +A A+L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 1332 NGIKMGDKTLTV 1367 NG ++GD+ L V Sbjct: 338 NGYRLGDRVLQV 349 Score = 37.4 bits (85), Expect = 0.23 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP T+ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 1332 NGIKMGDKT--LTVRRANQGTSQPRPEQET 1415 NG K T +TV+ AN P Q+T Sbjct: 187 NGQKPPGATEPITVKFAN------NPSQKT 210
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 51.6 bits (122), Expect = 1e-05 Identities = 34/100 (34%), Positives = 50/100 (50%) Frame = +3 Query: 1086 NLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 1265 +LN G G G GG G + I V LP T+ ++ L + GP+ +++D +TG Sbjct: 91 SLNCGGGGGRDGHGGGSNGTNLI-VNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGY 149 Query: 1266 SKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQG 1385 S GYAF + + A +LNGI + +K L V A G Sbjct: 150 SFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYARPG 189
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 51.6 bits (122), Expect = 1e-05 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Frame = +3 Query: 1044 PSLAAALGPSQPNPNLNLGAVGLTPGSAGGL--EGPDRIFVGGLPYYFTEAQVRELLESF 1217 P+ + GPS N N +P G + + V LP T+ + R L S Sbjct: 9 PTSNTSNGPSSNNRNCP------SPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSI 62 Query: 1218 GPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQP 1397 G + LV+D+ TG S GY F Y D + A LNG+++ KT+ V A ++ Sbjct: 63 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 122 Query: 1398 R 1400 R Sbjct: 123 R 123 Score = 41.6 bits (96), Expect = 0.012 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IFV L E+ + +L FG + +++D T KG+ F + + +A A+L Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 1332 NGIKMGDKTLTV 1367 NG ++GD+ L V Sbjct: 352 NGYRLGDRVLQV 363 Score = 37.7 bits (86), Expect = 0.18 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP T+ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 1332 NGIKMGDKT--LTVRRAN 1379 NG K T +TV+ AN Sbjct: 187 NGQKPSGATEPITVKFAN 204
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 51.6 bits (122), Expect = 1e-05 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Frame = +3 Query: 1044 PSLAAALGPSQPNPNLNLGAVGLTPGSAGGL--EGPDRIFVGGLPYYFTEAQVRELLESF 1217 P+ + GPS N N +P G + + V LP T+ + R L S Sbjct: 21 PTSNTSNGPSSNNRNCP------SPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSI 74 Query: 1218 GPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQP 1397 G + LV+D+ TG S GY F Y D + A LNG+++ KT+ V A ++ Sbjct: 75 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 134 Query: 1398 R 1400 R Sbjct: 135 R 135 Score = 41.6 bits (96), Expect = 0.012 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IFV L E+ + +L FG + +++D T KG+ F + + +A A+L Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 1332 NGIKMGDKTLTV 1367 NG ++GD+ L V Sbjct: 364 NGYRLGDRVLQV 375 Score = 37.7 bits (86), Expect = 0.18 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP T+ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 198 Query: 1332 NGIKMGDKT--LTVRRAN 1379 NG K T +TV+ AN Sbjct: 199 NGQKPSGATEPITVKFAN 216
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 51.6 bits (122), Expect = 1e-05 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Frame = +3 Query: 1044 PSLAAALGPSQPNPNLNLGAVGLTPGSAGGL--EGPDRIFVGGLPYYFTEAQVRELLESF 1217 P+ + GPS N N +P G + + V LP T+ + R L S Sbjct: 16 PTSNTSNGPSSNNRNCP------SPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69 Query: 1218 GPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQP 1397 G + LV+D+ TG S GY F Y D + A LNG+++ KT+ V A ++ Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129 Query: 1398 R 1400 R Sbjct: 130 R 130 Score = 41.6 bits (96), Expect = 0.012 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IFV L E+ + +L FG + +++D T KG+ F + + +A A+L Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 1332 NGIKMGDKTLTV 1367 NG ++GD+ L V Sbjct: 359 NGYRLGDRVLQV 370 Score = 37.7 bits (86), Expect = 0.18 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP T+ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 193 Query: 1332 NGIKMGDKT--LTVRRAN 1379 NG K T +TV+ AN Sbjct: 194 NGQKPSGATEPITVKFAN 211
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 51.2 bits (121), Expect = 2e-05 Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 1/210 (0%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 +++VG LP + + +A F Q + + N + + F FV M +VEEA Sbjct: 98 KLFVGNLPYDIDSEGLAQLFQQA------GVVEIAEVIYNRETDRSRGFGFVTMSTVEEA 151 Query: 969 SNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD 1148 A V++ D N L + + P G P A P Sbjct: 152 DKA------------VELYSQYDLNGRLLT-VNKAAPR--------GSRPERAPRTFQPT 190 Query: 1149 -RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 RI+VG +P+ +A++ ++ G + +V DRE+G S+G+ F A A Sbjct: 191 YRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIA 250 Query: 1326 ALNGIKMGDKTLTVRRANQGTSQPRPEQET 1415 L+G + +T+ V A + RP + T Sbjct: 251 NLDGQTLDGRTIRVNAAEE-----RPRRNT 275
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 51.2 bits (121), Expect = 2e-05 Identities = 29/93 (31%), Positives = 44/93 (47%) Frame = +3 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 G + V LP T+ ++R L S G + L++D+ G+S GY F Y + A Sbjct: 18 GRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77 Query: 1320 CAALNGIKMGDKTLTVRRANQGTSQPRPEQETI 1418 + LNG+++ KT+ V S RP E I Sbjct: 78 ISTLNGLRLQSKTIKV-------SYARPSSEVI 103 Score = 40.4 bits (93), Expect = 0.027 Identities = 21/72 (29%), Positives = 36/72 (50%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IF+ L E + ++ FG + +++D T KG+ F + + +A A+L Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 1332 NGIKMGDKTLTV 1367 NG ++GDK L V Sbjct: 306 NGYRLGDKILQV 317 Score = 34.3 bits (77), Expect = 2.0 Identities = 17/64 (26%), Positives = 32/64 (50%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +++ GLP T+ V ++ FG + ++ D+ TG S+G AF + + + A + Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167 Query: 1332 NGIK 1343 G K Sbjct: 168 IGHK 171
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 50.8 bits (120), Expect = 2e-05 Identities = 23/76 (30%), Positives = 39/76 (51%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R FVGGL + + + + FG + ++ DRETG S+G+ F ++D A Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66 Query: 1329 LNGIKMGDKTLTVRRA 1376 +NG ++ + +TV A Sbjct: 67 MNGQELDGRNITVNEA 82
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White mustard)| (Brassica hirta) Length = 169 Score = 50.4 bits (119), Expect = 3e-05 Identities = 25/76 (32%), Positives = 38/76 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R FVGGL + E + FG L ++ DRETG S+G+ F ++D A Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 1329 LNGIKMGDKTLTVRRA 1376 +NG + +++TV A Sbjct: 69 MNGQDLDGRSITVNEA 84
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 50.1 bits (118), Expect = 3e-05 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +3 Query: 1059 ALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGG-LPYYFTEAQVRELLESFGPLRGF 1235 A GP+ N N + +P +G E + LP T+ +++ L S G + Sbjct: 15 ANGPTTVNNNCS------SPVDSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESC 68 Query: 1236 DLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPR 1400 LV+D+ TG S GY F Y D + A LNG+++ KT+ V A ++ R Sbjct: 69 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123 Score = 40.0 bits (92), Expect = 0.036 Identities = 21/72 (29%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IFV L E+ + ++ FG + +++D T KG+ F + + +A A+L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 1332 NGIKMGDKTLTV 1367 NG ++GD+ L V Sbjct: 338 NGYRLGDRVLQV 349 Score = 37.4 bits (85), Expect = 0.23 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V GLP T+ ++ +L +G + ++ D+ TG S+G F + + A L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 1332 NGIKMGDKT--LTVRRANQGTSQPRPEQET 1415 NG K T +TV+ AN P Q+T Sbjct: 187 NGQKPPGATEPITVKFAN------NPSQKT 210
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 49.7 bits (117), Expect = 4e-05 Identities = 26/84 (30%), Positives = 42/84 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVGGL + E + + SFGP+ +VKDRET S+G+ F + + A A Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPR 1400 +NG + + + V A + R Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>Q9BYG3:MK67I_HUMAN MKI67 FHA domain-interacting nucleolar phosphoprotein - Homo sapiens| (Human) Length = 293 Score = 49.7 bits (117), Expect = 4e-05 Identities = 24/73 (32%), Positives = 36/73 (49%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++V LP E Q+ FG + F L + + TGNSKGYAF ++ +V I Sbjct: 44 PGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVA 103 Query: 1323 AALNGIKMGDKTL 1361 +N G++ L Sbjct: 104 ETMNNYLFGERLL 116
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 49.7 bits (117), Expect = 4e-05 Identities = 29/93 (31%), Positives = 43/93 (46%) Frame = +3 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 G + V LP T+ ++R L S G + L++D+ G+S GY F Y + A Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77 Query: 1320 CAALNGIKMGDKTLTVRRANQGTSQPRPEQETI 1418 LNG+++ KT+ V S RP E I Sbjct: 78 INTLNGLRLQSKTIKV-------SYARPSSEVI 103 Score = 40.0 bits (92), Expect = 0.036 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 IF+ L E + ++ FG + +++D T KG+ F + +A A+L Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 1332 NGIKMGDKTLTV 1367 NG ++GDK L V Sbjct: 306 NGYRLGDKILQV 317 Score = 37.7 bits (86), Expect = 0.18 Identities = 18/64 (28%), Positives = 33/64 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +++ GLP T+ V ++ FG + ++ D+ TG S+G AF + + + A + Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167 Query: 1332 NGIK 1343 NG K Sbjct: 168 NGHK 171
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 49.3 bits (116), Expect = 6e-05 Identities = 42/177 (23%), Positives = 74/177 (41%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 ++++GGL +E + +F A G T V+N + F FV +VEEA Sbjct: 8 KLFIGGLNVQTSESGLRGHFE----AFG--TLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61 Query: 969 SNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD 1148 AMA +G V+++R S PG+ ++ Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSAR--------------------PGAHAKVK--- 98 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 ++FVGGL E + E FG + +++ D+++G +G+ F +Q+ + D A Sbjct: 99 KLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155 Score = 38.9 bits (89), Expect = 0.079 Identities = 25/85 (29%), Positives = 43/85 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL +E+ +R E+FG L +V + +T S+ + F Y ++ D A AA Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 G+ T+ ++RA RP Sbjct: 68 SPHAVDGN-TVELKRAVSREDSARP 91
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 49.3 bits (116), Expect = 6e-05 Identities = 22/80 (27%), Positives = 45/80 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVGGL + E + ++ +G + +VKDRET S+G+ F +++++ A A Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 1329 LNGIKMGDKTLTVRRANQGT 1388 +NG + + + V +A + + Sbjct: 67 MNGKSVDGRQIRVDQAGKSS 86
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 49.3 bits (116), Expect = 6e-05 Identities = 22/80 (27%), Positives = 45/80 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVGGL + E + ++ +G + +VKDRET S+G+ F +++++ A A Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 1329 LNGIKMGDKTLTVRRANQGT 1388 +NG + + + V +A + + Sbjct: 67 MNGKSVDGRQIRVDQAGKSS 86
>Q96J87:CELF6_HUMAN CUG-BP- and ETR-3-like factor 6 - Homo sapiens (Human)| Length = 481 Score = 49.3 bits (116), Expect = 6e-05 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 13/94 (13%) Frame = +3 Query: 1050 LAAALG----PSQPNPNLN-------LGAVGLTPGSAGGLEGPD--RIFVGGLPYYFTEA 1190 +AAA G P+ P P L +G GL PG A ++ D ++FVG +P E Sbjct: 1 MAAAPGGSAQPAGPGPRLGFSTADSGVGMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQ 60 Query: 1191 QVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++ L E FG + ++KDR TG KG AF Y Sbjct: 61 DLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTY 94
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 48.9 bits (115), Expect = 8e-05 Identities = 22/80 (27%), Positives = 45/80 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVGGL + E + ++ +G + +VKDRET S+G+ F +++++ A A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 1329 LNGIKMGDKTLTVRRANQGT 1388 +NG + + + V +A + + Sbjct: 67 MNGKSVDGRQIRVDQAGKSS 86
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 48.9 bits (115), Expect = 8e-05 Identities = 22/80 (27%), Positives = 45/80 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVGGL + E + ++ +G + +VKDRET S+G+ F +++++ A A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 1329 LNGIKMGDKTLTVRRANQGT 1388 +NG + + + V +A + + Sbjct: 67 MNGKSVDGRQIRVDQAGKSS 86
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 48.9 bits (115), Expect = 8e-05 Identities = 22/80 (27%), Positives = 45/80 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVGGL + E + ++ +G + +VKDRET S+G+ F +++++ A A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 1329 LNGIKMGDKTLTVRRANQGT 1388 +NG + + + V +A + + Sbjct: 67 MNGKSVDGRQIRVDQAGKSS 86
>Q5NVC8:CELF4_PONPY CUG-BP- and ETR-3-like factor 4 - Pongo pygmaeus (Orangutan)| Length = 486 Score = 48.9 bits (115), Expect = 8e-05 Identities = 64/271 (23%), Positives = 104/271 (38%), Gaps = 24/271 (8%) Frame = +3 Query: 1080 NPNLNLGAVGLTPGSAGGLEGPD-----------------RIFVGGLPYYFTEAQVRELL 1208 N +L+ +G +PGSAG + G ++F+G +P E ++ L Sbjct: 15 NASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 74 Query: 1209 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGT 1388 E FG + ++KDR TG KG AF Y + A +AL+ Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALH------------------ 116 Query: 1389 SQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTKVVCLTQVISADE-----LRDDEEYED 1553 EQ+T+ GG+ CL Q S D + + ++ ED Sbjct: 117 -----EQKTLPGMNRPIQVKPADSESRGGS-----SCLRQPPSQDRKLFVGMLNKQQSED 166 Query: 1554 ILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKF- 1730 D+R +GN+ + I R P G + G F++Y+ + A +HG + Sbjct: 167 ---DVRRLFEAFGNIEECTILR-GPDGNSK----GCAFVKYSSHAEAQAAINALHGSQTM 218 Query: 1731 -GGNQVVAVFYPENKFTDGDYDD*MKSSAQL 1820 G + + V KF D D + M+ Q+ Sbjct: 219 PGASSSLVV-----KFADTDKERTMRRMQQM 244 Score = 37.0 bits (84), Expect = 0.30 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 14/96 (14%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVG L +E VR L E+FG + +++ + GNSKG AF Y A A Sbjct: 153 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD-GNSKGCAFVKYSSHAEAQAAINA 211 Query: 1329 LNG------------IKMG--DKTLTVRRANQGTSQ 1394 L+G +K DK T+RR Q Q Sbjct: 212 LHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
>Q7TSY6:CELF4_MOUSE CUG-BP- and ETR-3-like factor 4 - Mus musculus (Mouse)| Length = 486 Score = 48.9 bits (115), Expect = 8e-05 Identities = 64/271 (23%), Positives = 104/271 (38%), Gaps = 24/271 (8%) Frame = +3 Query: 1080 NPNLNLGAVGLTPGSAGGLEGPD-----------------RIFVGGLPYYFTEAQVRELL 1208 N +L+ +G +PGSAG + G ++F+G +P E ++ L Sbjct: 15 NASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 74 Query: 1209 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGT 1388 E FG + ++KDR TG KG AF Y + A +AL+ Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALH------------------ 116 Query: 1389 SQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTKVVCLTQVISADE-----LRDDEEYED 1553 EQ+T+ GG+ CL Q S D + + ++ ED Sbjct: 117 -----EQKTLPGMNRPIQVKPADSESRGGS-----SCLRQPPSQDRKLFVGMLNKQQSED 166 Query: 1554 ILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKF- 1730 D+R +GN+ + I R P G + G F++Y+ + A +HG + Sbjct: 167 ---DVRRLFEAFGNIEECTILR-GPDGNSK----GCAFVKYSSHAEAQAAINALHGSQTM 218 Query: 1731 -GGNQVVAVFYPENKFTDGDYDD*MKSSAQL 1820 G + + V KF D D + M+ Q+ Sbjct: 219 PGASSSLVV-----KFADTDKERTMRRMQQM 244 Score = 37.0 bits (84), Expect = 0.30 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 14/96 (14%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVG L +E VR L E+FG + +++ + GNSKG AF Y A A Sbjct: 153 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD-GNSKGCAFVKYSSHAEAQAAINA 211 Query: 1329 LNG------------IKMG--DKTLTVRRANQGTSQ 1394 L+G +K DK T+RR Q Q Sbjct: 212 LHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
>Q9BZC1:CELF4_HUMAN CUG-BP- and ETR-3-like factor 4 - Homo sapiens (Human)| Length = 486 Score = 48.9 bits (115), Expect = 8e-05 Identities = 64/271 (23%), Positives = 104/271 (38%), Gaps = 24/271 (8%) Frame = +3 Query: 1080 NPNLNLGAVGLTPGSAGGLEGPD-----------------RIFVGGLPYYFTEAQVRELL 1208 N +L+ +G +PGSAG + G ++F+G +P E ++ L Sbjct: 15 NASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 74 Query: 1209 ESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGT 1388 E FG + ++KDR TG KG AF Y + A +AL+ Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALH------------------ 116 Query: 1389 SQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTKVVCLTQVISADE-----LRDDEEYED 1553 EQ+T+ GG+ CL Q S D + + ++ ED Sbjct: 117 -----EQKTLPGMNRPIQVKPADSESRGGS-----SCLRQPPSQDRKLFVGMLNKQQSED 166 Query: 1554 ILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKF- 1730 D+R +GN+ + I R P G + G F++Y+ + A +HG + Sbjct: 167 ---DVRRLFEAFGNIEECTILR-GPDGNSK----GCAFVKYSSHAEAQAAINALHGSQTM 218 Query: 1731 -GGNQVVAVFYPENKFTDGDYDD*MKSSAQL 1820 G + + V KF D D + M+ Q+ Sbjct: 219 PGASSSLVV-----KFADTDKERTMRRMQQM 244 Score = 37.0 bits (84), Expect = 0.30 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 14/96 (14%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVG L +E VR L E+FG + +++ + GNSKG AF Y A A Sbjct: 153 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD-GNSKGCAFVKYSSHAEAQAAINA 211 Query: 1329 LNG------------IKMG--DKTLTVRRANQGTSQ 1394 L+G +K DK T+RR Q Q Sbjct: 212 LHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 247
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 48.5 bits (114), Expect = 1e-04 Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 1/197 (0%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEA 968 +++VG L +A+ +A F + GN + + + + F FV M S EE Sbjct: 88 KIFVGNLLFSADSAALAELFERA-----GNVEMV-EVIYDKLTGRSRGFGFVTMSSKEEV 141 Query: 969 SNA-MALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 A +G +G ++V P + N + G+ G G + Sbjct: 142 EAACQQFNGYELDGRALRVNSGP---PPEKRENSSFRENSSFRGGSRG-----GGSFDSS 193 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 +R++VG L + + + L G + +V DR++G S+G+ F Y + A Sbjct: 194 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 253 Query: 1326 ALNGIKMGDKTLTVRRA 1376 +L+G+ + + + V A Sbjct: 254 SLDGVDLNGRAIRVSPA 270 Score = 46.6 bits (109), Expect = 4e-04 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +3 Query: 1143 PD-RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 PD +IFVG L + A + EL E G + +++ D+ TG S+G+ F + A Sbjct: 85 PDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144 Query: 1320 CAALNGIKMGDKTLTVRRANQGTSQPRPEQ 1409 C NG ++ + L R N G P PE+ Sbjct: 145 CQQFNGYELDGRAL---RVNSG---PPPEK 168
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus laevis| (African clawed frog) Length = 365 Score = 48.5 bits (114), Expect = 1e-04 Identities = 39/176 (22%), Positives = 72/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL ++++ +F Q T + + + F FV S +E Sbjct: 14 RKLFIGGLSFETTDESLREHFEQ------WGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S S+P +L + Sbjct: 68 VDAAMTARPHKVDGRVVEPKRAVSREDS-------SRPGAHLTV---------------- 104 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +RE E +G + +++ DR +G +G+AF ++D + D Sbjct: 105 KKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVD 160 Score = 40.8 bits (94), Expect = 0.021 Identities = 23/85 (27%), Positives = 41/85 (48%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +RE E +G L +++D + S+G+ F Y + D A A Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 K+ + + +RA RP Sbjct: 75 -RPHKVDGRVVEPKRAVSREDSSRP 98
>Q5RJM0:MK67I_RAT MKI67 FHA domain-interacting nucleolar phosphoprotein - Rattus| norvegicus (Rat) Length = 271 Score = 48.5 bits (114), Expect = 1e-04 Identities = 20/73 (27%), Positives = 41/73 (56%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +++G LP +E+ + + FG +R F L + + TGNS+G+AF ++ +V I + Sbjct: 46 VYLGHLPSTLSESHIYDYCAQFGDIRRFRLSRSKRTGNSRGFAFVEFESEDVAKIVAETM 105 Query: 1332 NGIKMGDKTLTVR 1370 + G++ L+ + Sbjct: 106 DNYLFGERLLSCK 118
>Q7TN33:CELF6_MOUSE CUG-BP- and ETR-3-like factor 6 - Mus musculus (Mouse)| Length = 460 Score = 48.5 bits (114), Expect = 1e-04 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 13/94 (13%) Frame = +3 Query: 1050 LAAALG----PSQPNPNLNL-------GAVGLTPGSAGGLEGPD--RIFVGGLPYYFTEA 1190 +AAA G P+ P+P L G GL PG A ++ D ++FVG +P E Sbjct: 1 MAAAPGGSAPPAGPSPRLAFSTADSGGGMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQ 60 Query: 1191 QVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++ L E FG + ++KDR TG KG AF Y Sbjct: 61 DLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTY 94
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus (Rat)| Length = 379 Score = 48.1 bits (113), Expect = 1e-04 Identities = 37/176 (21%), Positives = 72/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL + ++ +F + T + + + F FV VEE Sbjct: 35 RKLFIGGLSFETTDDSLREHFEK------WGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S+ +P +L + Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSV-------KPGAHLTV---------------- 125 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + ++++DR++G +G+AF + D + D Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 181 Score = 41.6 bits (96), Expect = 0.012 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +RE E +G L +++D +T S+G+ F Y + D A A Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 48.1 bits (113), Expect = 1e-04 Identities = 37/176 (21%), Positives = 72/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL + ++ +F + T + + + F FV VEE Sbjct: 35 RKLFIGGLSFETTDDSLREHFEK------WGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S+ +P +L + Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSV-------KPGAHLTV---------------- 125 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + ++++DR++G +G+AF + D + D Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 181 Score = 41.6 bits (96), Expect = 0.012 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +RE E +G L +++D +T S+G+ F Y + D A A Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 48.1 bits (113), Expect = 1e-04 Identities = 37/176 (21%), Positives = 72/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL + ++ +F + T + + + F FV VEE Sbjct: 35 RKLFIGGLSFETTDDSLREHFEK------WGTLTDCVVMRDPQTKRSRGFGFVTYSCVEE 88 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S+ +P +L + Sbjct: 89 VDAAMCARPHKVDGRVVEPKRAVSREDSV-------KPGAHLTV---------------- 125 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + ++++DR++G +G+AF + D + D Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 181 Score = 41.6 bits (96), Expect = 0.012 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +RE E +G L +++D +T S+G+ F Y + D A A Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
>P51968:RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 - Xenopus laevis| (African clawed frog) Length = 373 Score = 48.1 bits (113), Expect = 1e-04 Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 2/178 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSV 959 R++++GGL + ++ +F Q G T D V+ + + F FV V Sbjct: 27 RKLFIGGLSFETTDDSLREHFEQW----GKLT----DCVVMRDPQTKRSRGFGFVTYSCV 78 Query: 960 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 EE +M+ +G V+ +R S ++P +L + Sbjct: 79 EEVDASMSARPHKVDGRVVEPKRAVSREDS-------ARPGAHLTV-------------- 117 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ ES+G + ++++DR++G +G+AF + D + D Sbjct: 118 --KKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 173 Score = 42.0 bits (97), Expect = 0.009 Identities = 23/85 (27%), Positives = 43/85 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +RE E +G L +++D +T S+G+ F Y + D + +A Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 K+ + + +RA RP Sbjct: 88 -RPHKVDGRVVEPKRAVSREDSARP 111
>Q5XI28:RAVR1_RAT Ribonucleoprotein PTB-binding 1 - Rattus norvegicus (Rat)| Length = 748 Score = 48.1 bits (113), Expect = 1e-04 Identities = 30/80 (37%), Positives = 38/80 (47%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V LP T+AQ EL+ FG L LV TG+SKGY F Y + A + L G Sbjct: 136 VANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLG 195 Query: 1338 IKMGDKTLTVRRANQGTSQP 1397 +G +TL V + G P Sbjct: 196 KPLGPRTLYVHWTDAGQLTP 215
>Q9CW46:RAVR1_MOUSE Ribonucleoprotein PTB-binding 1 - Mus musculus (Mouse)| Length = 748 Score = 48.1 bits (113), Expect = 1e-04 Identities = 30/80 (37%), Positives = 38/80 (47%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V LP T+AQ EL+ FG L LV TG+SKGY F Y + A + L G Sbjct: 136 VANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLG 195 Query: 1338 IKMGDKTLTVRRANQGTSQP 1397 +G +TL V + G P Sbjct: 196 KPLGPRTLYVHWTDAGQLTP 215
>Q91VE6:MK67I_MOUSE MKI67 FHA domain-interacting nucleolar phosphoprotein - Mus musculus| (Mouse) Length = 317 Score = 48.1 bits (113), Expect = 1e-04 Identities = 21/73 (28%), Positives = 39/73 (53%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +++G LP +E+ + FG + F L + + TGNSKGYAF ++ +V I + Sbjct: 49 VYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 108 Query: 1332 NGIKMGDKTLTVR 1370 + G++ L+ + Sbjct: 109 DNYLFGERLLSCK 121
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana (Mouse-ear| cress) Length = 169 Score = 48.1 bits (113), Expect = 1e-04 Identities = 22/76 (28%), Positives = 39/76 (51%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R FVGGL + + ++ FG + ++ DRE+G S+G+ F ++D A Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66 Query: 1329 LNGIKMGDKTLTVRRA 1376 +NG ++ + +TV A Sbjct: 67 MNGKELDGRVITVNEA 82
>P42698:DR111_ARATH DNA-damage-repair/toleration protein DRT111, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 387 Score = 48.1 bits (113), Expect = 1e-04 Identities = 31/102 (30%), Positives = 54/102 (52%) Frame = +3 Query: 1482 PTKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGK 1661 PT+V+ L ++ ++ D+E ED ++ E KYG + + +I V + Sbjct: 281 PTRVLLLRNMVGPGQV--DDELED---EVGGECGKYGTVTRVLIFEITEPNFPVHEAV-R 334 Query: 1662 VFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKFTDGD 1787 +F++++ + +TKA V + GR FGG V A FY E KF+ + Sbjct: 335 IFVQFSRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNE 376
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 48.1 bits (113), Expect = 1e-04 Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 2/214 (0%) Frame = +3 Query: 759 MTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKK 932 M Q +++VGGL + ++T+ YF+Q + D V+ + N + Sbjct: 1 MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVV--------DCVIMKDKTTNQSRG 52 Query: 933 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGL 1112 F FV+ + +A +G R D P + P + P G Sbjct: 53 FGFVKFKDPNCVGTVLASRPHTLDG------RNIDPKPCTPRGMQPERSRPRE--GWQQK 104 Query: 1113 TPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 P + ++IFVGG+P+ E +++E FG + ++ D E +G+ F + Sbjct: 105 EPRTENSRS--NKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITF 162 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQ 1394 +D D A MG K + V+RA S+ Sbjct: 163 EDEQSVDQAVNMHFHDIMG-KKVEVKRAEPRDSK 195 Score = 43.9 bits (102), Expect = 0.002 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++FVGGL + T+ +R +G + ++KD+ T S+G+ F ++D N A+ Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 1329 ----LNGIKMGDKTLTVRRANQGTSQPR 1400 L+G + K T R S+PR Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERSRPR 98
>Q20870:DAZ1_CAEEL DAZ protein 1 - Caenorhabditis elegans| Length = 499 Score = 48.1 bits (113), Expect = 1e-04 Identities = 29/76 (38%), Positives = 38/76 (50%) Frame = +3 Query: 1068 PSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVK 1247 PS P GA L P P+RIFVGG P TE ++RE E F ++ +VK Sbjct: 41 PSTPIQLYPTGAAALIPAPPTYELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVK 100 Query: 1248 DRETGNSKGYAFCVYQ 1295 + G SKGY F ++ Sbjct: 101 SLD-GQSKGYGFITFE 115
>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus laevis| (African clawed frog) Length = 346 Score = 47.8 bits (112), Expect = 2e-04 Identities = 36/176 (20%), Positives = 72/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL E+++ Y+ Q T + + + F FV + E Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQ------WGTLTDCVVMRDPASKRSRGFGFVTFSCMNE 62 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AMA +G V+ +R S ++P ++ + Sbjct: 63 VDAAMATRPHTIDGRVVEPKRAVAREES-------AKPGAHVTV---------------- 99 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++FVGG+ E +RE E +G + +++ D+++G +G+AF + D + D Sbjct: 100 KKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVD 155 Score = 40.0 bits (92), Expect = 0.036 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA 1325 ++F+GGL + TE +R E +G L +++D + S+G+ F + +N D A A Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA 68
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 47.8 bits (112), Expect = 2e-04 Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 7/219 (3%) Frame = +3 Query: 765 QQATRHARRVYVGGLPPTANEQTVAIYFNQV--MAAIGGNTAGPGDAVLNVYINHDKKFA 938 ++ ++ R V+VG LP T N++ + +F + + ++ + P + L+ KK A Sbjct: 178 EERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLS------KKLA 231 Query: 939 FVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTP 1118 ++ + + N A ++F+ + +A + + Sbjct: 232 AIKRKIHPDQKNINAY--VVFKEESAATQALKRNGAQIADGF------------RIRVDL 277 Query: 1119 GSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 S +FVG LPY E+ + + G + +V+D+ TG KG+ + ++++ Sbjct: 278 ASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFEN 337 Query: 1299 LNVTDIACAALNGIKMGDKTLTVRRAN-----QGTSQPR 1400 + +A N MG K +R N Q S PR Sbjct: 338 TDSVHLALKLNNSELMGRKLRVMRSVNKEKFKQQNSNPR 376
>Q28521:ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 - Macaca mulatta (Rhesus| macaque) Length = 320 Score = 47.4 bits (111), Expect = 2e-04 Identities = 38/176 (21%), Positives = 71/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL ++++ +F Q T + + + F FV +VE+ Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQ------WGTLTDCVVMRDPNTKRSRGFGFVTYATVEK 67 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S +P +L + Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDS-------QRPGAHLTV---------------- 104 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + +++ DR +G +G+AF + D N D Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVD 160 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +R E +G L +++D T S+G+ F Y + D A A Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNA 74 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 K+ + + +RA RP Sbjct: 75 -RPHKVDGRVVEPKRAVSREDSQRP 98
>P51992:RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 - Xenopus laevis| (African clawed frog) Length = 385 Score = 47.4 bits (111), Expect = 2e-04 Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 2/178 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSV 959 R++++GGL + ++ +F Q G T D V+ + + F FV V Sbjct: 27 RKLFIGGLSFETTDDSLREHFEQW----GKLT----DCVVMRDPQTKRSRGFGFVTYSCV 78 Query: 960 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 EE +M+ +G V+ +R S ++P +L + Sbjct: 79 EEVDASMSARPHKVDGRVVEPKRAVSREDS-------ARPGAHLTV-------------- 117 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + ++++DR++G +G+AF + D + D Sbjct: 118 --KKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 173 Score = 42.0 bits (97), Expect = 0.009 Identities = 23/85 (27%), Positives = 43/85 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +RE E +G L +++D +T S+G+ F Y + D + +A Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 K+ + + +RA RP Sbjct: 88 -RPHKVDGRVVEPKRAVSREDSARP 111
>Q00539:NAM8_YEAST Protein NAM8 - Saccharomyces cerevisiae (Baker's yeast)| Length = 523 Score = 47.4 bits (111), Expect = 2e-04 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 11/204 (5%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIG----------GNTAGPGDAVLNVYINHDKKFA 938 ++Y+G L PT ++ TV Q+ A++G NT G ++ +++ + Sbjct: 55 QLYMGDLDPTWDKNTV----RQIWASLGEANINVRMMWNNTLNNGSRS-SMGPKNNQGYC 109 Query: 939 FVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTP 1118 FV+ S A+NA+ +G++ P K + S S N +LN G Sbjct: 110 FVDFPSSTHAANALLKNGMLIPNFPNKKLKLNWATSSY------SNSNNSLNNVKSGNNC 163 Query: 1119 GSAGGLEGPDRIFVGGLPYYFTEAQVREL-LESFGPLRGFDLVKDRETGNSKGYAFCVYQ 1295 IFVG L TE+Q+ EL + + +V D+ TG SKGY F + Sbjct: 164 S----------IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFT 213 Query: 1296 DLNVTDIACAALNGIKMGDKTLTV 1367 + + +A + + G+ + + + V Sbjct: 214 NSDEQQLALSEMQGVFLNGRAIKV 237
>Q6GL69:MK67I_XENTR MKI67 FHA domain-interacting nucleolar phosphoprotein-like - Xenopus| tropicalis (Western clawed frog) (Silurana tropicalis) Length = 276 Score = 47.4 bits (111), Expect = 2e-04 Identities = 24/77 (31%), Positives = 38/77 (49%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 G P I++G +P E Q+RE FG + L + ++TGNSKGYA+ ++ V Sbjct: 36 GAVSPGVIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVA 95 Query: 1311 DIACAALNGIKMGDKTL 1361 I +N ++ L Sbjct: 96 KIVADTMNNYLFCERLL 112
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 47.4 bits (111), Expect = 2e-04 Identities = 22/84 (26%), Positives = 46/84 (54%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + E + + +G + +VKDRET S+G+ F +++++ A A Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPR 1400 +NG + + + V +A + + + R Sbjct: 66 MNGKSVDGRQIRVDQAGKSSGERR 89
>Q00916:RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa homolog - Saccharomyces| cerevisiae (Baker's yeast) Length = 300 Score = 47.0 bits (110), Expect = 3e-04 Identities = 21/49 (42%), Positives = 31/49 (63%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 IF+G LPY E ++++ FG + +VKD+ T SKGYAF V++D Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 47.0 bits (110), Expect = 3e-04 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +3 Query: 1143 PD-RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 PD ++FVG L + AQ+ +L ES G + +++ D+ TG S+G+ F + A Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156 Query: 1320 CAALNGIKMGDKTLTVRRANQGTSQPRPEQ 1409 NG + + L R N G P+ E+ Sbjct: 157 AQQFNGYEFEGRPL---RVNAGPPPPKREE 183 Score = 40.4 bits (93), Expect = 0.027 Identities = 23/90 (25%), Positives = 39/90 (43%) Frame = +3 Query: 1107 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 1286 G GS G +R++VG L + + + L G + ++ DR++G SKG+ F Sbjct: 244 GSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFV 303 Query: 1287 VYQDLNVTDIACAALNGIKMGDKTLTVRRA 1376 A +LNG + + + V A Sbjct: 304 TLSSSQEVQKAINSLNGADLDGRQIRVSEA 333
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus (Rat)| Length = 320 Score = 47.0 bits (110), Expect = 3e-04 Identities = 38/176 (21%), Positives = 71/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL ++++ +F Q T + + + F FV +VEE Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQ------WGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S +P +L + Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDS-------QRPGAHLTV---------------- 104 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + +++ DR +G +G+AF + D + D Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +R E +G L +++D T S+G+ F Y + D A A Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 K+ + + +RA RP Sbjct: 75 -RPHKVDGRVVEPKRAVSREDSQRP 98
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 47.0 bits (110), Expect = 3e-04 Identities = 38/176 (21%), Positives = 71/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL ++++ +F Q T + + + F FV +VEE Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQ------WGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S +P +L + Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDS-------QRPGAHLTV---------------- 104 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + +++ DR +G +G+AF + D + D Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +R E +G L +++D T S+G+ F Y + D A A Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 K+ + + +RA RP Sbjct: 75 -RPHKVDGRVVEPKRAVSREDSQRP 98
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 47.0 bits (110), Expect = 3e-04 Identities = 38/176 (21%), Positives = 71/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL ++++ +F Q T + + + F FV +VEE Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQ------WGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 67 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S +P +L + Sbjct: 68 VDAAMNARPHKVDGRVVEPKRAVSREDS-------QRPGAHLTV---------------- 104 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + +++ DR +G +G+AF + D + D Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +R E +G L +++D T S+G+ F Y + D A A Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 K+ + + +RA RP Sbjct: 75 -RPHKVDGRVVEPKRAVSREDSQRP 98
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 47.0 bits (110), Expect = 3e-04 Identities = 38/176 (21%), Positives = 71/176 (40%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 965 R++++GGL ++++ +F Q T + + + F FV +VEE Sbjct: 13 RKLFIGGLSFETTDESLRSHFEQ------WGTLTDCVVMRDPNTKRSRGFGFVTYATVEE 66 Query: 966 ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP 1145 AM +G V+ +R S +P +L + Sbjct: 67 VDAAMNARPHKVDGRVVEPKRAVSREDS-------QRPGAHLTV---------------- 103 Query: 1146 DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +IFVGG+ E +R+ E +G + +++ DR +G +G+AF + D + D Sbjct: 104 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 159 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + T+ +R E +G L +++D T S+G+ F Y + D A A Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 73 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRP 1403 K+ + + +RA RP Sbjct: 74 -RPHKVDGRVVEPKRAVSREDSQRP 97
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila melanogaster| (Fruit fly) Length = 385 Score = 47.0 bits (110), Expect = 3e-04 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD-IACA 1325 ++FVGGL E +RE + FG + ++V D++TG +G+AF + D + D I Sbjct: 116 KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ 175 Query: 1326 ALNGIKMGDKTLTVRRA 1376 + IK +KTL V++A Sbjct: 176 KTHSIK--NKTLDVKKA 190 Score = 37.7 bits (86), Expect = 0.18 Identities = 44/180 (24%), Positives = 73/180 (40%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL Y T+ ++ E +G + ++KD +T S+G+ F Y + D A A Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTKVVCLTQ 1508 K+ +T+ +RA PR E ++ GA K Sbjct: 85 -RPHKIDGRTVEPKRA-----VPRQEIDS----------------PNAGATVKK------ 116 Query: 1509 VISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADID 1688 + LRDD + E +RE + +G +V I +G G F+E+ D D Sbjct: 117 -LFVGGLRDDHDE----ECLREYFKDFGQIVSVNIVSDKDTGKKR----GFAFIEFDDYD 167
>Q7SYS2:MK67I_XENLA MKI67 FHA domain-interacting nucleolar phosphoprotein-like - Xenopus| laevis (African clawed frog) Length = 278 Score = 47.0 bits (110), Expect = 3e-04 Identities = 25/86 (29%), Positives = 39/86 (45%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P I++G +P E Q++E FG + L + ++TGNSKGYA+ Y+ V I Sbjct: 40 PGVIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVA 99 Query: 1323 AALNGIKMGDKTLTVRRANQGTSQPR 1400 +N ++ L PR Sbjct: 100 DTMNNYLFCERLLKCEFVTPEKVHPR 125
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea mays| (Maize) Length = 157 Score = 47.0 bits (110), Expect = 3e-04 Identities = 23/76 (30%), Positives = 39/76 (51%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R FVGGL + + + S+G + ++ DRETG S+G+ F + N A Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68 Query: 1329 LNGIKMGDKTLTVRRA 1376 +NG ++ + +TV +A Sbjct: 69 MNGKELDGRNITVNQA 84
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana (Mouse-ear| cress) Length = 176 Score = 47.0 bits (110), Expect = 3e-04 Identities = 22/76 (28%), Positives = 38/76 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R FVGGL + + + +G + ++ DRETG S+G+ F ++D A Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68 Query: 1329 LNGIKMGDKTLTVRRA 1376 +NG + +++TV A Sbjct: 69 MNGQDLDGRSITVNEA 84
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard)| (Brassica hirta) Length = 166 Score = 47.0 bits (110), Expect = 3e-04 Identities = 22/76 (28%), Positives = 38/76 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R FVGGL + + + +G + ++ DRETG S+G+ F ++D A Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 1329 LNGIKMGDKTLTVRRA 1376 +NG + +++TV A Sbjct: 69 MNGQDLDGRSITVNEA 84
>Q4R535:CELF4_MACFA CUG-BP- and ETR-3-like factor 4 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 474 Score = 47.0 bits (110), Expect = 3e-04 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 17/88 (19%) Frame = +3 Query: 1080 NPNLNLGAVGLTPGSAGGLEGPD-----------------RIFVGGLPYYFTEAQVRELL 1208 N +L+ +G +PGSAG + G ++F+G +P E ++ L Sbjct: 15 NASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLF 74 Query: 1209 ESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 E FG + ++KDR TG KG AF Y Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTY 102 Score = 38.1 bits (87), Expect = 0.14 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 14/99 (14%) Frame = +3 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 G ++FVG L +E VR L E+FG + +++ + GNSKG AF Y A Sbjct: 139 GDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD-GNSKGCAFVKYSSHAEAQAA 197 Query: 1320 CAALNG------------IKMG--DKTLTVRRANQGTSQ 1394 AL+G +K DK T+RR Q Q Sbjct: 198 INALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 236
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 46.6 bits (109), Expect = 4e-04 Identities = 74/341 (21%), Positives = 119/341 (34%) Frame = +3 Query: 711 FTAPTQFNPLVMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGP 890 F A +Q + A T +YVG L P+ NE + FNQV Sbjct: 20 FPAVSQVAAVAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLR---- 75 Query: 891 GDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGP 1070 V + +A+V + E+AS AM AP++ R + L Sbjct: 76 ---VCRDLTHRSLGYAYVNFANPEDASRAME----SLNYAPIRDR-------PIRIMLSN 121 Query: 1071 SQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKD 1250 P+ L+ G +F+ L + E SFG + + D Sbjct: 122 RDPSTRLS---------------GKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMD 166 Query: 1251 RETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPRPEQETIXXXX 1430 G SKGY F ++ A LNG+ + DK + V + + R E Sbjct: 167 -VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSE-------- 217 Query: 1431 XXXXXXXXXXXXXGGALPTKVVCLTQVISADELRDDEEYEDILEDMREEGRKYGNLVKAV 1610 GA+P+ + + E+ DDE +++ KYG++ AV Sbjct: 218 -------------SGAVPSFTNVYVKNL-PKEITDDE--------LKKTFGKYGDISSAV 255 Query: 1611 IPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHGRKFG 1733 + + D SG + G F+ + + + A M+G G Sbjct: 256 VMK-DQSGNSRSFG----FVNFVSPEAAAVAVEKMNGISLG 291 Score = 42.0 bits (97), Expect = 0.009 Identities = 21/86 (24%), Positives = 44/86 (51%) Frame = +3 Query: 1125 AGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLN 1304 +G + ++V LP T+ ++++ +G + ++KD ++GNS+ + F + Sbjct: 218 SGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKD-QSGNSRSFGFVNFVSPE 276 Query: 1305 VTDIACAALNGIKMGDKTLTVRRANQ 1382 +A +NGI +G+ L V RA + Sbjct: 277 AAAVAVEKMNGISLGEDVLYVGRAQK 302
>P40565:IST3_YEAST U2 snRNP component IST3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 148 Score = 46.6 bits (109), Expect = 4e-04 Identities = 23/72 (31%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I++G L TE + + +G L +D TG S+G+A+ Y+D T +A L Sbjct: 33 IYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNL 92 Query: 1332 NGIKMGDKTLTV 1367 NG K+G + L + Sbjct: 93 NGFKIGGRALKI 104
>Q924M5:BOLL_MOUSE Protein boule-like - Mus musculus (Mouse)| Length = 281 Score = 46.6 bits (109), Expect = 4e-04 Identities = 28/79 (35%), Positives = 41/79 (51%) Frame = +3 Query: 1059 ALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFD 1238 +L PS PNP + T G G P+RIFVGG+ + E +R+ +G ++ Sbjct: 5 SLSPS-PNPVSPVPLNNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVK 63 Query: 1239 LVKDRETGNSKGYAFCVYQ 1295 +V DR G SKGY F ++ Sbjct: 64 IVNDR-AGVSKGYGFITFE 81
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 46.2 bits (108), Expect = 5e-04 Identities = 34/108 (31%), Positives = 51/108 (47%) Frame = +3 Query: 1062 LGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDL 1241 + P+Q +LN G G G + G + I V LP T+ ++ L + GP+ + Sbjct: 76 MAPAQSTNSLNSGGDG-GGGDTQAVNGTNLI-VNYLPQDMTDRELYALFRTCGPINTCRI 133 Query: 1242 VKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQG 1385 +KD +TG S GYAF + A +NGI + +K L V A G Sbjct: 134 MKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYARPG 181
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 46.2 bits (108), Expect = 5e-04 Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 7/115 (6%) Frame = +3 Query: 1062 LGPSQPNPNLNLGAVGLTPGSAGG---LEGP----DRIFVGGLPYYFTEAQVRELLESFG 1220 L P N +LN GL+ GS G + P + V LP T+ ++ L + G Sbjct: 91 LPPMASNNSLN-NLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIG 149 Query: 1221 PLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQG 1385 P+ +++D +TG S GYAF + + A LNGI + +K L V A G Sbjct: 150 PINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPG 204
>Q5RBU8:ROA2_PONPY Heterogeneous nuclear ribonucleoproteins A2/B1 - Pongo pygmaeus| (Orangutan) Length = 353 Score = 46.2 bits (108), Expect = 5e-04 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 2/178 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSV 959 R++++GGL E+++ Y+ Q G T D V+ + + F FV S+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQW----GKLT----DCVVMRDPASKRSRGFGFVTFSSM 72 Query: 960 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 E AMA +G V+ +R S G G Sbjct: 73 AEVDAAMAARPHSIDGRVVEPKRAVAREES-----------------------GKPGAHV 109 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++FVGG+ E +R+ E +G + +++ DR++G +G+ F + D + D Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVD 167 Score = 39.7 bits (91), Expect = 0.047 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + TE +R E +G L +++D + S+G+ F + + D A AA Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81
>O88569:ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 - Mus musculus (Mouse)| Length = 353 Score = 46.2 bits (108), Expect = 5e-04 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 2/178 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSV 959 R++++GGL E+++ Y+ Q G T D V+ + + F FV S+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQW----GKLT----DCVVMRDPASKRSRGFGFVTFSSM 72 Query: 960 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 E AMA +G V+ +R S G G Sbjct: 73 AEVDAAMAARPHSIDGRVVEPKRAVAREES-----------------------GKPGAHV 109 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++FVGG+ E +R+ E +G + +++ DR++G +G+ F + D + D Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVD 167 Score = 39.7 bits (91), Expect = 0.047 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + TE +R E +G L +++D + S+G+ F + + D A AA Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81
>P22626:ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 - Homo sapiens (Human)| Length = 353 Score = 46.2 bits (108), Expect = 5e-04 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 2/178 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSV 959 R++++GGL E+++ Y+ Q G T D V+ + + F FV S+ Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQW----GKLT----DCVVMRDPASKRSRGFGFVTFSSM 72 Query: 960 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 E AMA +G V+ +R S G G Sbjct: 73 AEVDAAMAARPHSIDGRVVEPKRAVAREES-----------------------GKPGAHV 109 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++FVGG+ E +R+ E +G + +++ DR++G +G+ F + D + D Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVD 167 Score = 39.7 bits (91), Expect = 0.047 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + TE +R E +G L +++D + S+G+ F + + D A AA Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 81
>Q2HJ60:ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 - Bos taurus (Bovine)| Length = 341 Score = 46.2 bits (108), Expect = 5e-04 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 2/178 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSV 959 R++++GGL E+++ Y+ Q G T D V+ + + F FV S+ Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQW----GKLT----DCVVMRDPASKRSRGFGFVTFSSM 60 Query: 960 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 E AMA +G V+ +R S G G Sbjct: 61 AEVDAAMAARPHSIDGRVVEPKRAVAREES-----------------------GKPGAHV 97 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++FVGG+ E +R+ E +G + +++ DR++G +G+ F + D + D Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVD 155 Score = 39.7 bits (91), Expect = 0.047 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + TE +R E +G L +++D + S+G+ F + + D A AA Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 46.2 bits (108), Expect = 5e-04 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I+VG L Y TEA ++ + +G ++ L DRETG +G+AF + D A L Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITEL 62 Query: 1332 NGIKMGDKTLTVRRA 1376 +G + + L V +A Sbjct: 63 DGAEWMGRQLRVNKA 77
>Q6NU14:HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B - Xenopus laevis| (African clawed frog) Length = 291 Score = 46.2 bits (108), Expect = 5e-04 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 G E P ++FVGGL TE Q+++ FG + +L D +T +G+ F Y D Sbjct: 114 GKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTD 169 Score = 37.0 bits (84), Expect = 0.30 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + ++ + E L FG + + D TG S+G+ F +++D D Sbjct: 35 KMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 94 Query: 1329 LNGIKMGDKTLTVRRAN--QGTSQPR 1400 K+ K + +RA QG P+ Sbjct: 95 KEH-KLDGKLIDPKRAKALQGKEPPK 119
>Q8CIN6:CELF3_MOUSE CUG-BP- and ETR-3-like factor 3 - Mus musculus (Mouse)| Length = 465 Score = 46.2 bits (108), Expect = 5e-04 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +3 Query: 1137 EGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 EGPD IF+ LP FT++++ ++ FG + + DR T SK + F + + Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434 Query: 1311 DIACAALNGIKMGDKTLTVR 1370 A A+NG ++G K L V+ Sbjct: 435 QAAIQAMNGFQIGMKRLKVQ 454 Score = 40.4 bits (93), Expect = 0.027 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = +3 Query: 1134 LEGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++ PD ++FVG +P + E ++ + E FG + ++KD+ TG KG AF Y Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTY 55
>Q5SZQ8:CELF3_HUMAN CUG-BP- and ETR-3-like factor 3 - Homo sapiens (Human)| Length = 465 Score = 46.2 bits (108), Expect = 5e-04 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +3 Query: 1137 EGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 EGPD IF+ LP FT++++ ++ FG + + DR T SK + F + + Sbjct: 375 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 434 Query: 1311 DIACAALNGIKMGDKTLTVR 1370 A A+NG ++G K L V+ Sbjct: 435 QAAIQAMNGFQIGMKRLKVQ 454 Score = 40.4 bits (93), Expect = 0.027 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = +3 Query: 1134 LEGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++ PD ++FVG +P + E ++ + E FG + ++KD+ TG KG AF Y Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTY 55
>Q08E07:CELF3_BOVIN CUG-BP- and ETR-3-like factor 3 - Bos taurus (Bovine)| Length = 461 Score = 46.2 bits (108), Expect = 5e-04 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +3 Query: 1137 EGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 EGPD IF+ LP FT++++ ++ FG + + DR T SK + F + + Sbjct: 371 EGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASA 430 Query: 1311 DIACAALNGIKMGDKTLTVR 1370 A A+NG ++G K L V+ Sbjct: 431 QAAIQAMNGFQIGMKRLKVQ 450 Score = 40.4 bits (93), Expect = 0.027 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = +3 Query: 1134 LEGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++ PD ++FVG +P + E ++ + E FG + ++KD+ TG KG AF Y Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTY 55
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 45.8 bits (107), Expect = 6e-04 Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 2/182 (1%) Frame = +3 Query: 780 HARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMR 953 H R++++GGL P E+ + +++ Q + D V+ + + F F+ Sbjct: 30 HLRKLFIGGLAPYTTEENLKLFYGQWGKVV--------DVVVMRDAATKRSRGFGFITYT 81 Query: 954 SVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGG 1133 A + +G V+ +R A P + + N+ Sbjct: 82 KSLMVDRAQENRPHIIDGKTVEAKR---------ALPRPERESRETNISV---------- 122 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++FVGGL E +RE FG + L+ D+ TG +G+AF + D + D Sbjct: 123 ----KKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVD 178 Query: 1314 IA 1319 A Sbjct: 179 KA 180 Score = 39.3 bits (90), Expect = 0.061 Identities = 29/94 (30%), Positives = 46/94 (48%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 LE ++F+GGL Y TE ++ +G + +++D T S+G+ F Y + D Sbjct: 28 LEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVD 87 Query: 1314 IACAALNGIKMGDKTLTVRRANQGTSQPRPEQET 1415 A I G KT+ +RA PRPE+E+ Sbjct: 88 RAQENRPHIIDG-KTVEAKRA-----LPRPERES 115
>Q8IY67:RAVR1_HUMAN Ribonucleoprotein PTB-binding 1 - Homo sapiens (Human)| Length = 606 Score = 45.8 bits (107), Expect = 6e-04 Identities = 29/80 (36%), Positives = 36/80 (45%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V LP T+ Q EL+ FG L LV TG SKGY F Y + A + L G Sbjct: 136 VANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLG 195 Query: 1338 IKMGDKTLTVRRANQGTSQP 1397 +G +TL V + G P Sbjct: 196 KPLGPRTLYVHWTDAGQLTP 215
>Q8JIY8:MK67I_DANRE MKI67 FHA domain-interacting nucleolar phosphoprotein-like - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 269 Score = 45.8 bits (107), Expect = 6e-04 Identities = 22/73 (30%), Positives = 37/73 (50%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++VG LP E Q++ E FG + + + ++TG SKGY F ++ V I Sbjct: 44 PGVLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVA 103 Query: 1323 AALNGIKMGDKTL 1361 +N MG++ + Sbjct: 104 ETMNNYLMGERII 116
>Q3SWU3:HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like - Rattus norvegicus| (Rat) Length = 322 Score = 45.8 bits (107), Expect = 6e-04 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 G E P ++FVGGL +E Q++E +FG + +L D +T +G+ F Y D Sbjct: 131 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTD 186 Score = 38.1 bits (87), Expect = 0.14 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Frame = +3 Query: 1044 PSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGP 1223 PS AA PS +P+ A L P S +++F+GGL + ++ + E L FG Sbjct: 21 PSGAARAAPSL-SPS-RFSACPLDPSSFP--TSGNKMFIGGLSWDTSKKDLTEYLSRFGE 76 Query: 1224 LRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRAN--QGTSQP 1397 + + D TG S+G+ F +++D D L K+ K + +RA +G P Sbjct: 77 VVDCTIKTDPVTGRSRGFGFVLFKDAASVD-KVLELKEHKLDGKLIDPKRAKALKGKEPP 135 Query: 1398 R 1400 + Sbjct: 136 K 136
>Q9Z130:HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like - Mus musculus (Mouse)| Length = 301 Score = 45.8 bits (107), Expect = 6e-04 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 G E P ++FVGGL +E Q++E +FG + +L D +T +G+ F Y D Sbjct: 109 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTD 164 Score = 37.4 bits (85), Expect = 0.23 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%) Frame = +3 Query: 1086 NLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 1265 N+ A G ++ + ++F+GGL + ++ + E L FG + + D TG Sbjct: 9 NIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGR 68 Query: 1266 SKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRAN--QGTSQPR 1400 S+G+ F +++D D L K+ K + +RA +G P+ Sbjct: 69 SRGFGFVLFKDAASVD-KVLELKEHKLDGKLIDPKRAKALKGKEPPK 114
>O14979:HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like - Homo sapiens (Human)| Length = 420 Score = 45.8 bits (107), Expect = 6e-04 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 G E P ++FVGGL +E Q++E +FG + +L D +T +G+ F Y D Sbjct: 228 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTD 283 Score = 37.4 bits (85), Expect = 0.23 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%) Frame = +3 Query: 1086 NLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 1265 N+ A G ++ + ++F+GGL + ++ + E L FG + + D TG Sbjct: 128 NIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGR 187 Query: 1266 SKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRAN--QGTSQPR 1400 S+G+ F +++D D L K+ K + +RA +G P+ Sbjct: 188 SRGFGFVLFKDAASVD-KVLELKEHKLDGKLIDPKRAKALKGKEPPK 233
>Q5ZI72:HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like - Gallus gallus| (Chicken) Length = 301 Score = 45.8 bits (107), Expect = 6e-04 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 G E P ++FVGGL +E Q++E +FG + +L D +T +G+ F Y D Sbjct: 110 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTD 165 Score = 35.4 bits (80), Expect = 0.88 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 ++F+GGL + ++ + E L FG + + D TG S+G+ F +++D Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 80
>Q9WX37:RBPE_ANASP Putative RNA-binding protein rbpE - Anabaena sp. (strain PCC 7120)| Length = 99 Score = 45.4 bits (106), Expect = 8e-04 Identities = 26/86 (30%), Positives = 42/86 (48%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I+VG L Y T+ + ++ +G + L DRETG +G+ F + D A AL Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62 Query: 1332 NGIKMGDKTLTVRRANQGTSQPRPEQ 1409 +G + + L V +A +PR E+ Sbjct: 63 DGAEWMGRVLKVNKA-----RPREEK 83
>Q64368:DAZL_MOUSE Deleted in azoospermia-like - Mus musculus (Mouse)| Length = 298 Score = 45.4 bits (106), Expect = 8e-04 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 7/94 (7%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF-CVYQDLNVTDIA 1319 P+ +FVGG+ E ++R +G ++ ++ DR TG SKGY F Y D++V I Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIV 97 Query: 1320 CAALN----GIKMGDKTLTVRRANQGT--SQPRP 1403 + +N +K+G +R+ N T QPRP Sbjct: 98 ESQINFHGKKLKLGP---AIRKQNLCTYHVQPRP 128
>Q8WP23:BOLL_MACFA Protein boule-like - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 283 Score = 45.4 bits (106), Expect = 8e-04 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = +3 Query: 1059 ALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFD 1238 +L PS PNP + T G P+RIFVGG+ + E+ +R+ +G ++ Sbjct: 5 SLSPS-PNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVK 63 Query: 1239 LVKDRETGNSKGYAFCVYQ 1295 +V DR G SKGY F ++ Sbjct: 64 IVNDR-AGVSKGYGFVTFE 81
>Q8N9W6:BOLL_HUMAN Protein boule-like - Homo sapiens (Human)| Length = 283 Score = 45.4 bits (106), Expect = 8e-04 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = +3 Query: 1059 ALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFD 1238 +L PS PNP + T G P+RIFVGG+ + E+ +R+ +G ++ Sbjct: 5 SLSPS-PNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVK 63 Query: 1239 LVKDRETGNSKGYAFCVYQ 1295 +V DR G SKGY F ++ Sbjct: 64 IVNDR-AGVSKGYGFVTFE 81
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 45.1 bits (105), Expect = 0.001 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%) Frame = +3 Query: 1083 PNLNLGAVGLTPGSAGGLEGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRE 1256 P ++ +V G G +G + + V LP T+ ++ L + GP+ ++KD + Sbjct: 62 PAISTNSVNSGGGDCGDNQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYK 121 Query: 1257 TGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQG 1385 TG S GYAF + A +LNG+ + +K L V A G Sbjct: 122 TGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPG 164
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 45.1 bits (105), Expect = 0.001 Identities = 23/80 (28%), Positives = 39/80 (48%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++F+GGL E + +G + L+KDRET S+G+AF ++ A Sbjct: 7 PGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAV 66 Query: 1323 AALNGIKMGDKTLTVRRANQ 1382 +NG + K + V +A + Sbjct: 67 RDMNGKSLDGKAIKVAQATK 86
>Q91579:CEL3A_XENLA CUG-BP- and ETR-3-like factor 3-A - Xenopus laevis (African clawed| frog) Length = 462 Score = 45.1 bits (105), Expect = 0.001 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +3 Query: 1137 EGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 EGP+ IF+ LP FT++++ ++ FG + + DR T SK + F + + Sbjct: 372 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSA 431 Query: 1311 DIACAALNGIKMGDKTLTVR 1370 A A+NG ++G K L V+ Sbjct: 432 QAAIQAMNGFQIGMKRLKVQ 451 Score = 39.3 bits (90), Expect = 0.061 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = +3 Query: 1134 LEGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++ PD ++F+G +P E ++ + E FG + ++KD+ TG KG AF Y Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTY 55
>P62997:TRA2B_RAT Splicing factor, arginine/serine-rich 10 - Rattus norvegicus (Rat)| Length = 288 Score = 44.7 bits (104), Expect = 0.001 Identities = 20/70 (28%), Positives = 40/70 (57%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V GL Y TE +RE+ +GP+ +V D+++ S+G+AF +++++ A NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 1338 IKMGDKTLTV 1367 +++ + + V Sbjct: 182 MELDGRRIRV 191
>P62996:TRA2B_MOUSE Splicing factor, arginine/serine-rich 10 - Mus musculus (Mouse)| Length = 288 Score = 44.7 bits (104), Expect = 0.001 Identities = 20/70 (28%), Positives = 40/70 (57%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V GL Y TE +RE+ +GP+ +V D+++ S+G+AF +++++ A NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 1338 IKMGDKTLTV 1367 +++ + + V Sbjct: 182 MELDGRRIRV 191
>P62995:TRA2B_HUMAN Splicing factor, arginine/serine-rich 10 - Homo sapiens (Human)| Length = 288 Score = 44.7 bits (104), Expect = 0.001 Identities = 20/70 (28%), Positives = 40/70 (57%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V GL Y TE +RE+ +GP+ +V D+++ S+G+AF +++++ A NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 1338 IKMGDKTLTV 1367 +++ + + V Sbjct: 182 MELDGRRIRV 191
>Q3ZBT6:TRA2B_BOVIN Splicing factor, arginine/serine-rich 10 - Bos taurus (Bovine)| Length = 288 Score = 44.7 bits (104), Expect = 0.001 Identities = 20/70 (28%), Positives = 40/70 (57%) Frame = +3 Query: 1158 VGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 V GL Y TE +RE+ +GP+ +V D+++ S+G+AF +++++ A NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 1338 IKMGDKTLTV 1367 +++ + + V Sbjct: 182 MELDGRRIRV 191
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 44.7 bits (104), Expect = 0.001 Identities = 52/212 (24%), Positives = 82/212 (38%), Gaps = 3/212 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDA--VLNVYINHDKKFAFVEMRSV 959 R +YVG L E + F+Q+ GP + ++ + ++D + FVE Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQI---------GPCKSCKMITEHTSNDP-YCFVEFYEH 58 Query: 960 EEASNAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGL 1136 +A+ A+A ++G G VKV T PS SQ N Sbjct: 59 RDAAAALAAMNGRKILGKEVKVNWAT--TPS-------SQKKDTSN-------------- 95 Query: 1137 EGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDI 1316 +FVG L T ++ FG + +VKD TG SKGY F + + + Sbjct: 96 --HFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 153 Query: 1317 ACAALNGIKMGDKTLTVRRANQGTSQPRPEQE 1412 A + G +G + + A + P+ QE Sbjct: 154 AIVHMGGQWLGGRQIRTNWATRKPPAPKSTQE 185 Score = 35.4 bits (80), Expect = 0.88 Identities = 22/86 (25%), Positives = 39/86 (45%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++VG L TE + +L GP + ++ + + + Y F + + A Sbjct: 8 PRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRDAAAAL 65 Query: 1323 AALNGIKMGDKTLTVRRANQGTSQPR 1400 AA+NG K+ K + V A +SQ + Sbjct: 66 AAMNGRKILGKEVKVNWATTPSSQKK 91
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 44.7 bits (104), Expect = 0.001 Identities = 51/212 (24%), Positives = 81/212 (38%), Gaps = 2/212 (0%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGP-GDAVLNVYINHDKKFAFVEMRSVE 962 + +YVG L E + F+Q+ GP + + + + + FVE Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQI---------GPCKNCKMIMDTAGNDPYCFVEFHEHR 57 Query: 963 EASNAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 A+ A+A ++G G VKV T PS + + V T S Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATT----------PSSQKKDTSSSTVVSTQRSQNHFH 107 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 +FVG L T ++ FG + +VKD TG SKGY F + + + A Sbjct: 108 ----VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENA 163 Query: 1320 CAALNGIKMGDKTLTVRRANQGTSQPRPEQET 1415 + G +G + + R N T +P + T Sbjct: 164 IQQMGGQWLGGRQI---RTNWATRKPPAPKST 192 Score = 41.6 bits (96), Expect = 0.012 Identities = 26/88 (29%), Positives = 41/88 (46%) Frame = +3 Query: 1137 EGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDI 1316 E P ++VG L TEA + +L GP + ++ D T + Y F + + Sbjct: 4 EMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAA 61 Query: 1317 ACAALNGIKMGDKTLTVRRANQGTSQPR 1400 A AA+NG K+ K + V A +SQ + Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKK 89
>Q9JLI8:SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 - Mus| musculus (Mouse) Length = 962 Score = 44.7 bits (104), Expect = 0.001 Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 2/163 (1%) Frame = +3 Query: 933 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGL 1112 + +VE + A A+ LD + EG P+ V D NP+ + Sbjct: 748 YCYVEFGEEKSAQQALELDRKIVEGRPMFVSPCVD-----------KSKNPDFKVFRYST 796 Query: 1113 TPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 T LE ++F+ GLP+ T+ ++ ++ ++ G ++ LV +R G KG A+ Y Sbjct: 797 T------LE-KHKLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEY 848 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRAN--QGTSQPRPEQET 1415 ++ + A ++G+ + + + V +N Q +PE T Sbjct: 849 ENESQASQAVMKMDGMTIRENVIKVAISNPPQRKVPEKPEVRT 891
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 44.7 bits (104), Expect = 0.001 Identities = 23/77 (29%), Positives = 39/77 (50%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I++G L T++ + EL GP+ + +DR + G+ FC + + AC L Sbjct: 13 IYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQIL 72 Query: 1332 NGIKMGDKTLTVRRANQ 1382 N +K+ K + V RA+Q Sbjct: 73 NQVKLFGKPIRVNRASQ 89 Score = 39.7 bits (91), Expect = 0.047 Identities = 43/172 (25%), Positives = 63/172 (36%), Gaps = 7/172 (4%) Frame = +3 Query: 882 AGPGDAVLNVYINHDKK------FAFVEMRSVEEASNA-MALDGIMFEGAPVKVRRPTDY 1040 AGP V+N++I D+ F F E ++ A L+ + G P++V R + Sbjct: 34 AGP---VVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVNRASQ- 89 Query: 1041 NPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFG 1220 N +GA +FVG L E + + + G Sbjct: 90 -----------DRGVNTLIGA---------------NLFVGNLDPLVDERVLYDTFSALG 123 Query: 1221 PLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRA 1376 L V E G SKGY F Y D A A+N + +K +TV A Sbjct: 124 QLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYA 175
>P17133:RU17_DROME U1 small nuclear ribonucleoprotein 70 kDa - Drosophila melanogaster| (Fruit fly) Length = 448 Score = 44.7 bits (104), Expect = 0.001 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = +3 Query: 1137 EGPDR-IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 E P R +F+ + Y +E+++R E +GP++ L+ D+E+G KGYAF Y+ Sbjct: 98 EDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMH 157 Query: 1314 IACAALNGIKMGDKTLTV 1367 A +G K+ K + V Sbjct: 158 AAYKHADGKKIDSKRVLV 175
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 44.7 bits (104), Expect = 0.001 Identities = 23/80 (28%), Positives = 40/80 (50%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++F+GGL E + + +G + L+KDRET S+G+AF ++ A Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66 Query: 1323 AALNGIKMGDKTLTVRRANQ 1382 +NG + K + V +A + Sbjct: 67 RDMNGKSLDGKAIKVEQATK 86
>Q0V9L3:CELF4_XENTR CUG-BP- and ETR-3-like factor 4 - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 424 Score = 44.7 bits (104), Expect = 0.001 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Frame = +3 Query: 1080 NPNLNLGAVGLTPGSAGGLEGPD----RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVK 1247 NP ++ + +PG A + D ++F+G +P E ++ L E FG + ++K Sbjct: 21 NPTGHMNGLTHSPGGAATIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 80 Query: 1248 DRETGNSKGYAFCVY 1292 DR TG KG AF Y Sbjct: 81 DRFTGMHKGCAFLTY 95
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 44.3 bits (103), Expect = 0.002 Identities = 25/88 (28%), Positives = 39/88 (44%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG L T ++ FG + +VKD TG SKGY F + + + A + Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175 Query: 1332 NGIKMGDKTLTVRRANQGTSQPRPEQET 1415 G +G + + A + P+ QET Sbjct: 176 GGQWLGGRQIRTNWATRKPPAPKSTQET 203
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 44.3 bits (103), Expect = 0.002 Identities = 44/194 (22%), Positives = 83/194 (42%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V LP E ++R+ FG + +++D ++GNS+ + F ++ A + Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKM 289 Query: 1332 NGIKMGDKTLTVRRANQGTSQPRPEQETIXXXXXXXXXXXXXXXXXGGALPTKVVCLTQV 1511 NGI +GD L V RA Q + E+E G L K Sbjct: 290 NGISLGDDVLYVGRA-----QKKSEREEELRRKFEQERINRFEKSQGANLYLK------- 337 Query: 1512 ISADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAAAVPGVGKVFLEYADIDG 1691 + D+ DDE+ +++ + YGN+ + + +P G + G F+ Y++ + Sbjct: 338 -NLDDSVDDEKLKEMFSE-------YGNVTSSKV-MLNPQGMSR----GFGFVAYSNPEE 384 Query: 1692 STKAKVGMHGRKFG 1733 + +A M+G+ G Sbjct: 385 ALRALSEMNGKMIG 398 Score = 39.3 bits (90), Expect = 0.061 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 8/97 (8%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 L G IF+ L + E SFG + + D TG SKGY F ++ Sbjct: 132 LSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQ 190 Query: 1314 IACAALNGIKMGDKTLTV--------RRANQGTSQPR 1400 A LNG+ M DK + V R ++ T PR Sbjct: 191 AAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPR 227
>Q640A2:HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 297 Score = 44.3 bits (103), Expect = 0.002 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 G E P ++FVGGL TE Q+++ FG + +L D +T +G+ F Y Sbjct: 106 GKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTY 159 Score = 35.4 bits (80), Expect = 0.88 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 ++F+GGL + ++ + E L FG + + D TG S+G+ F +++D Sbjct: 27 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 76
>Q804A9:DAZL_CHICK Deleted in azoospermia-like - Gallus gallus (Chicken)| Length = 289 Score = 44.3 bits (103), Expect = 0.002 Identities = 20/52 (38%), Positives = 31/52 (59%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 P+ +FVGG+ EA++R E +G ++ ++ DR TG SKGY F + D Sbjct: 35 PNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLD 85
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 43.9 bits (102), Expect = 0.002 Identities = 51/212 (24%), Positives = 81/212 (38%), Gaps = 2/212 (0%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGP-GDAVLNVYINHDKKFAFVEMRSVE 962 + +YVG L E + F+Q+ GP + + + + + FVE Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQI---------GPCKNCKMIMDTAGNDPYCFVEFHEHR 57 Query: 963 EASNAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 A+ A+A ++G G VKV T PS + + V T S Sbjct: 58 HAAAALAAMNGRKIMGKEVKVNWATT----------PSSQKKDTSSSTVVSTQRSQDHFH 107 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 +FVG L T ++ FG + +VKD TG SKGY F + + + A Sbjct: 108 ----VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENA 163 Query: 1320 CAALNGIKMGDKTLTVRRANQGTSQPRPEQET 1415 + G +G + + R N T +P + T Sbjct: 164 IQQMGGQWLGGRQI---RTNWATRKPPAPKST 192 Score = 41.6 bits (96), Expect = 0.012 Identities = 26/88 (29%), Positives = 41/88 (46%) Frame = +3 Query: 1137 EGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDI 1316 E P ++VG L TEA + +L GP + ++ D T + Y F + + Sbjct: 4 EMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAA 61 Query: 1317 ACAALNGIKMGDKTLTVRRANQGTSQPR 1400 A AA+NG K+ K + V A +SQ + Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQKK 89
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 43.9 bits (102), Expect = 0.002 Identities = 39/199 (19%), Positives = 77/199 (38%), Gaps = 1/199 (0%) Frame = +3 Query: 783 ARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVE 962 ARR+YVG +P N + + A + + + Y ++F FV M++VE Sbjct: 83 ARRLYVGNIPRNLNNDELRTIVEEHGAI------EIAEVMYDKYSGRSRRFGFVTMKTVE 136 Query: 963 EASNAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 +A+ + L+ G +KV +P +++ +E Sbjct: 137 DANAVIEKLNDTEIGGRKIKVNIT-------------EKPLEGMDIATTQAEDSQF--VE 181 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 P ++++G L T +++ G + G + + T S G+ F + + A Sbjct: 182 SPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAA 241 Query: 1320 CAALNGIKMGDKTLTVRRA 1376 ALN + + + V +A Sbjct: 242 IQALNNSVLEGQKIRVNKA 260
>Q9TTV2:ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 - Saguinus oedipus| (Cotton-top tamarin) Length = 341 Score = 43.9 bits (102), Expect = 0.002 Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 2/178 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSV 959 R++++GGL E+++ Y+ Q G T D V+ + + F FV S+ Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQW----GKLT----DCVVMRDPASKRSRGFGFVTFSSM 60 Query: 960 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 E AMA +G V+ +R S G G Sbjct: 61 AEVDAAMAARPHSIDGRVVEPKRAVAREES-----------------------GKPGAHV 97 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++FVGG+ E +R+ +G + +++ DR++G +G+ F + D + D Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVD 155 Score = 40.0 bits (92), Expect = 0.036 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + TE +R E +G L +++D + S+G+ F + + D A AA Sbjct: 10 KLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 43.9 bits (102), Expect = 0.002 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 ++V F + +++E E +G + + V +E G SKG+ F ++ + A AL Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYK-VMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243 Query: 1332 NGIKMGD-KTLTVRRANQ 1382 NG MG+ K+L V RA + Sbjct: 244 NGKDMGEGKSLYVARAQK 261 Score = 39.3 bits (90), Expect = 0.061 Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 7/214 (3%) Frame = +3 Query: 792 VYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHD----KKFAFVEMRSV 959 +YVG LP NE + F+ +AGP VL++ + D + + + Sbjct: 4 LYVGDLPQDVNESGLFDKFS---------SAGP---VLSIRVCRDVITRRSLGYAYVNFQ 51 Query: 960 EEASNAMALDGIMFE---GAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAG 1130 + A ALD + F+ P+++ SQ +P+L VG Sbjct: 52 QPADAERALDTMNFDLVRNKPIRIMW--------------SQRDPSLRRSGVG------- 90 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 +F+ L + + +FG + + D E GNSKGY F ++ Sbjct: 91 ------NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAA 143 Query: 1311 DIACAALNGIKMGDKTLTVRRANQGTSQPRPEQE 1412 + + +NG+ + K + V G PR E+E Sbjct: 144 NTSIDKVNGMLLNGKKVYV-----GKFIPRKERE 172
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 43.9 bits (102), Expect = 0.002 Identities = 23/80 (28%), Positives = 39/80 (48%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++F+GGL E + + +G + L+KDRET S+G+AF + A Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAA 66 Query: 1323 AALNGIKMGDKTLTVRRANQ 1382 +NG + K + V +A + Sbjct: 67 RDMNGKSLDGKAIKVEQATK 86
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 43.9 bits (102), Expect = 0.002 Identities = 22/76 (28%), Positives = 38/76 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R FVGGL + + + +FG + ++ DRETG S+G+ F + A Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68 Query: 1329 LNGIKMGDKTLTVRRA 1376 +NG ++ + +TV +A Sbjct: 69 MNGKELDGRNITVNQA 84
>Q7ZWM3:CEL3B_XENLA CUG-BP- and ETR-3-like factor 3-B - Xenopus laevis (African clawed| frog) Length = 462 Score = 43.9 bits (102), Expect = 0.002 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +3 Query: 1137 EGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 EGP+ IF+ LP FT++++ ++ FG + + DR T SK + F + + Sbjct: 372 EGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSA 431 Query: 1311 DIACAALNGIKMGDKTLTVR 1370 A ++NG ++G K L V+ Sbjct: 432 QAAIQSMNGFQIGMKRLKVQ 451 Score = 39.3 bits (90), Expect = 0.061 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = +3 Query: 1134 LEGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++ PD ++F+G +P E ++ + E FG + ++KD+ TG KG AF Y Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTY 55 Score = 34.3 bits (77), Expect = 2.0 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 1140 GPDR-IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDI 1316 G DR +FVG L T+ VR + E+FG + +++ + G SKG AF +Q Sbjct: 92 GEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPD-GTSKGCAFVKFQTHTEAQA 150 Query: 1317 ACAALNG 1337 A AL+G Sbjct: 151 AINALHG 157
>O02008:TRA2_DROVI Transformer-2 sex-determining protein - Drosophila virilis (Fruit| fly) Length = 272 Score = 43.5 bits (101), Expect = 0.003 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I V GL T+ +VREL FGP+ +V D T S+G+ F +++L +A A Sbjct: 107 IGVFGLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDAC 166 Query: 1332 NGIKMGDKTLTV 1367 G+++ + + V Sbjct: 167 TGMEVDGRRIRV 178
>Q42404:RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa - Arabidopsis thaliana| (Mouse-ear cress) Length = 427 Score = 43.5 bits (101), Expect = 0.003 Identities = 23/72 (31%), Positives = 37/72 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FV L Y +E++++ ES+GP++ LV D+ T KGYAF Y A Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199 Query: 1332 NGIKMGDKTLTV 1367 +G K+ + + V Sbjct: 200 DGQKIDGRRVLV 211
>P21522:ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog -| Schistocerca americana (American grasshopper) Length = 342 Score = 43.5 bits (101), Expect = 0.003 Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 11/210 (5%) Frame = +3 Query: 780 HARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKK------FAF 941 H R++++GGL ++++ +F Q +++V + D K F F Sbjct: 15 HVRKLFIGGLDYRTTDESLKQHFEQ------------WGEIVDVVVMKDPKTKRSRGFGF 62 Query: 942 V---EMRSVEEASNAMA--LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAV 1106 + V++A NA +DG + E P + P +G Sbjct: 63 ITYSRAHMVDDAQNARPHKVDGRVVE---------------------PKRAVPRTEIGR- 100 Query: 1107 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 1286 P + ++ ++FVGG+ E +R+ + +G + +V D+ET +G+AF Sbjct: 101 ---PEAGATVK---KLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFV 154 Query: 1287 VYQDLNVTDIACAALNGIKMGDKTLTVRRA 1376 + D + D C + N ++ K + V++A Sbjct: 155 EFDDYDPVDKICLSRNH-QIRGKHIDVKKA 183 Score = 43.1 bits (100), Expect = 0.004 Identities = 25/86 (29%), Positives = 45/86 (52%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL Y T+ +++ E +G + ++KD +T S+G+ F Y ++ D A A Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRPE 1406 K+ + + +RA T RPE Sbjct: 78 -RPHKVDGRVVEPKRAVPRTEIGRPE 102
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 43.5 bits (101), Expect = 0.003 Identities = 24/84 (28%), Positives = 43/84 (51%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++F+GGL E ++ + GP+ L+KDR T S+G+AF +++ A Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAA 65 Query: 1323 AALNGIKMGDKTLTVRRANQGTSQ 1394 +NG + K + V +A + + Q Sbjct: 66 KDMNGKSLHGKAIKVEQAKKPSFQ 89
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 43.5 bits (101), Expect = 0.003 Identities = 22/80 (27%), Positives = 39/80 (48%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++F+GGL E + + +G + L+KDRET S+G+AF ++ Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVA 66 Query: 1323 AALNGIKMGDKTLTVRRANQ 1382 +NG + K + V +A + Sbjct: 67 RDMNGKSLDGKAIKVEQATK 86
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Macaca| fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 43.5 bits (101), Expect = 0.003 Identities = 23/80 (28%), Positives = 39/80 (48%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++F+GGL E + +G + L+KDRET S+G+AF ++ A Sbjct: 7 PGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAA 66 Query: 1323 AALNGIKMGDKTLTVRRANQ 1382 +NG + K + V +A + Sbjct: 67 RDMNGKSLDGKAIKVAQATK 86
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 43.5 bits (101), Expect = 0.003 Identities = 23/80 (28%), Positives = 39/80 (48%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P ++F+GGL E + +G + L+KDRET S+G+AF ++ A Sbjct: 7 PGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAA 66 Query: 1323 AALNGIKMGDKTLTVRRANQ 1382 +NG + K + V +A + Sbjct: 67 RDMNGKSLDGKAIKVAQATK 86
>Q7ZX83:HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A - Xenopus laevis| (African clawed frog) Length = 293 Score = 43.5 bits (101), Expect = 0.003 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = +3 Query: 1131 GLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 G E P ++FVGGL TE Q+++ FG + +L D +T +G+ F Y Sbjct: 106 GKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPIDTKTNERRGFCFVTY 159 Score = 37.4 bits (85), Expect = 0.23 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + ++ + E L FG + + D TG S+G+ F +++D D Sbjct: 27 KMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVD-KVLE 85 Query: 1329 LNGIKMGDKTLTVRRAN--QGTSQPR 1400 N K+ K + +RA +G P+ Sbjct: 86 TNEHKLDGKLIDPKRAKALKGKEPPK 111
>Q95192:DAZL_MACFA Deleted in azoospermia-like - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 295 Score = 43.5 bits (101), Expect = 0.003 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 16/132 (12%) Frame = +3 Query: 1056 AALGPSQPNPNLNLGAVGLTPGSAGGLEG---------PDRIFVGGLPYYFTEAQVRELL 1208 +A P PN ++ A SA +G P+ +FVGG+ E ++R Sbjct: 2 SAANPETPNSTISREA-STQSSSAAASQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFF 60 Query: 1209 ESFGPLRGFDLVKDRETGNSKGYAF-CVYQDLNVTDIACAALN----GIKMGDKTLTVRR 1373 +G ++ ++ DR TG SKGY F + D++V I + +N +K+G +R+ Sbjct: 61 ARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGP---AIRK 116 Query: 1374 ANQGT--SQPRP 1403 N QPRP Sbjct: 117 QNLCAYHVQPRP 128
>Q9IBD1:CELF3_DANRE CUG-BP- and ETR-3-like factor 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 452 Score = 43.5 bits (101), Expect = 0.003 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = +3 Query: 1137 EGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVT 1310 EGP+ IF+ LP FT++++ ++ FG + + DR T SK + F + + Sbjct: 362 EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 421 Query: 1311 DIACAALNGIKMGDKTLTVR 1370 A A+NG ++G K L V+ Sbjct: 422 QAAIQAMNGFQIGMKRLKVQ 441 Score = 40.0 bits (92), Expect = 0.036 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 14/126 (11%) Frame = +3 Query: 1059 ALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFD 1238 AL + P +N + + P + G G ++FVG L ++A VR++ E FG + Sbjct: 67 ALHEQKTLPGMNR-PIQVKPADSEG-RGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECT 124 Query: 1239 LVKDRETGNSKGYAFCVYQDLNVTDIACAALNG------------IKMGD--KTLTVRRA 1376 +++ + G SKG AF YQ A +AL+G +K D K +RR Sbjct: 125 VLRGPD-GASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRM 183 Query: 1377 NQGTSQ 1394 Q SQ Sbjct: 184 QQVASQ 189 Score = 39.3 bits (90), Expect = 0.061 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++F+G +P E ++ + E FG + ++KD+ TG KG AF Y Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTY 55
>Q24207:BOULE_DROME Protein boule - Drosophila melanogaster (Fruit fly)| Length = 228 Score = 43.5 bits (101), Expect = 0.003 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 11/113 (9%) Frame = +3 Query: 1113 TPGSAGGLEGP-----------DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRET 1259 TPG GGLE P +RIFVGG+ TEA + + ++G ++ ++ DR Sbjct: 13 TPG--GGLETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-A 69 Query: 1260 GNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPRPEQETI 1418 G SKGY F ++ A + + D+ L + A + QP P Q + Sbjct: 70 GVSKGYGFVTFETEQEAQRLQADGECVVLRDRKLNIAPAIK--KQPNPLQSIV 120
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 43.1 bits (100), Expect = 0.004 Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 3/209 (1%) Frame = +3 Query: 765 QQATRHARRVYVGGLPPTANEQTVAIYFNQV--MAAIGGNTAGPGDAVLNVYINHDKKFA 938 ++ ++ R V+VG LP T N++ + +F + + ++ + P + L+ KK A Sbjct: 176 EERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLS------KKLA 229 Query: 939 FVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLG-AVGLT 1115 ++ + F + + AAA + + G + + Sbjct: 230 AIKRK---------------FHPDQKSINAYVVFKEERAAAKALQRNGAQIAEGFRIRVD 274 Query: 1116 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 1295 S +FVG LPY E+ + E G + +V++ TG +G+ + +++ Sbjct: 275 LASETASRDKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFE 334 Query: 1296 DLNVTDIACAALNGIKMGDKTLTVRRANQ 1382 + + +A N MG K +R N+ Sbjct: 335 NTDAVHLALKLNNSELMGRKLRVMRSVNK 363
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 43.1 bits (100), Expect = 0.004 Identities = 25/91 (27%), Positives = 44/91 (48%) Frame = +3 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 G +FV LP T A ++++ + FG + V E G S+GY F ++ + A Sbjct: 110 GVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCK-VATLEDGKSRGYGFVQFEQEDAAHAA 168 Query: 1320 CAALNGIKMGDKTLTVRRANQGTSQPRPEQE 1412 LN + DK + V + + T + +PE++ Sbjct: 169 IQTLNSTIVADKEIYVGKFMKKTDRVKPEEK 199 Score = 34.3 bits (77), Expect = 2.0 Identities = 23/77 (29%), Positives = 35/77 (45%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +++ L +E +RE FG + + KD E +GYAF + + A + Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETV 261 Query: 1332 NGIKMGDKTLTVRRANQ 1382 NG K G K L V RA + Sbjct: 262 NGTKFGSKCLYVGRAQK 278
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 43.1 bits (100), Expect = 0.004 Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 3/185 (1%) Frame = +3 Query: 792 VYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS 971 V+VG L ++Q + F + +G G + K + +V+ + E A Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQS------GRSKGYGYVDFETPEAAK 318 Query: 972 NAMALDGIM-FEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGL--EG 1142 A+A +G +G V + NP P+ P P A G+ G E Sbjct: 319 AAVAANGTKEIDGRMVNLDLS---NPR------PANPQPYAQQRA-----GNFGDQLSEP 364 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 D +FVG L + TE + G ++ L D ++G KG+ + + D++ C Sbjct: 365 SDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAK-KC 423 Query: 1323 AALNG 1337 +NG Sbjct: 424 VEMNG 428 Score = 40.8 bits (94), Expect = 0.021 Identities = 24/84 (28%), Positives = 39/84 (46%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +FVG L + + + + E +G + G ++ D ++G SKGY + ++ A AA Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAA- 323 Query: 1332 NGIKMGDKTLTVRRANQGTSQPRP 1403 G K + R N S PRP Sbjct: 324 ----NGTKEIDGRMVNLDLSNPRP 343
>Q8N6W0:CELF5_HUMAN CUG-BP- and ETR-3-like factor 5 - Homo sapiens (Human)| Length = 485 Score = 43.1 bits (100), Expect = 0.004 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Frame = +3 Query: 1074 QPNPNLNLGAVGLTP--GSAGGLEGPD--RIFVGGLPYYFTEAQVRELLESFGPLRGFDL 1241 QP P+ +G+ G P G G++ D ++FVG +P + E ++ L E FG + + Sbjct: 18 QPRPS-PVGSSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTV 76 Query: 1242 VKDRETGNSKGYAFCVY 1292 +KD TG KG AF Y Sbjct: 77 LKDPYTGMHKGCAFLTY 93
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 42.7 bits (99), Expect = 0.005 Identities = 25/78 (32%), Positives = 39/78 (50%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 + V LP T+ ++ L + GP+ +++D +TG S GYAF + + A L Sbjct: 129 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 188 Query: 1332 NGIKMGDKTLTVRRANQG 1385 NGI + +K L V A G Sbjct: 189 NGITVRNKRLKVSYARPG 206
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 42.7 bits (99), Expect = 0.005 Identities = 35/161 (21%), Positives = 71/161 (44%) Frame = +3 Query: 933 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGL 1112 + +VE + + A A+ +D EG P+ V D NP+ + Sbjct: 766 YRYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVD-----------KSKNPDFKVFRYST 814 Query: 1113 TPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 + LE ++F+ GLP+ T+ ++ E+ ++ G ++ LV +R G KG A+ Y Sbjct: 815 S------LE-KHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEY 866 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPRPEQET 1415 ++ + A ++G+ + + + V +N + + ET Sbjct: 867 ENESQASQAVMKMDGMTIKENVIKVAISNPPQRKVPEKPET 907
>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo| sapiens (Human) Length = 963 Score = 42.7 bits (99), Expect = 0.005 Identities = 35/161 (21%), Positives = 71/161 (44%) Frame = +3 Query: 933 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGL 1112 + +VE + + A A+ +D EG P+ V D NP+ + Sbjct: 748 YCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVD-----------KSKNPDFKVFRYST 796 Query: 1113 TPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 + LE ++F+ GLP+ T+ ++ E+ ++ G ++ LV +R G KG A+ Y Sbjct: 797 S------LE-KHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEY 848 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPRPEQET 1415 ++ + A ++G+ + + + V +N + + ET Sbjct: 849 ENESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEKPET 889
>Q5R6W3:RBM18_PONPY Probable RNA-binding protein 18 - Pongo pygmaeus (Orangutan)| Length = 190 Score = 42.7 bits (99), Expect = 0.005 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Frame = +3 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRE---TGNSKGYAFCVY 1292 S G L+ R+++G L TE + +LL+ FG ++ FD + + G +GY F + Sbjct: 17 SEGSLQEGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNF 76 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRAN 1379 + + A LNG K L VR A+ Sbjct: 77 ETKQEAEQAIQCLNGKLALSKKLVVRWAH 105
>Q9CR83:RBM18_MOUSE Probable RNA-binding protein 18 - Mus musculus (Mouse)| Length = 190 Score = 42.7 bits (99), Expect = 0.005 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Frame = +3 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRE---TGNSKGYAFCVY 1292 S G L+ R+++G L TE + +LL+ FG ++ FD + + G +GY F + Sbjct: 17 SEGSLQEGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNF 76 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRAN 1379 + + A LNG K L VR A+ Sbjct: 77 ETKQEAEQAIQCLNGKLALSKKLVVRWAH 105
>Q96H35:RBM18_HUMAN Probable RNA-binding protein 18 - Homo sapiens (Human)| Length = 190 Score = 42.7 bits (99), Expect = 0.005 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Frame = +3 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRE---TGNSKGYAFCVY 1292 S G L+ R+++G L TE + +LL+ FG ++ FD + + G +GY F + Sbjct: 17 SEGSLQEGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGALEGQPRGYCFVNF 76 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRAN 1379 + + A LNG K L VR A+ Sbjct: 77 ETKQEAEQAIQCLNGKLALSKKLVVRWAH 105
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 42.4 bits (98), Expect = 0.007 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 5/112 (4%) Frame = +3 Query: 1080 NPNLNLGAVGLTPGSAGGLEGPDR-----IFVGGLPYYFTEAQVRELLESFGPLRGFDLV 1244 N N LG+VG S L + V LP + ++ L + GP+ ++ Sbjct: 51 NNNCGLGSVGNMANSTNSLNSGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIM 110 Query: 1245 KDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPR 1400 +D +TG S GY F + A LNGI + +K + V A G Q R Sbjct: 111 RDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLR 162
>P07909:ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 - Drosophila melanogaster| (Fruit fly) Length = 365 Score = 42.4 bits (98), Expect = 0.007 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 6/184 (3%) Frame = +3 Query: 780 HARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKK------FAF 941 H R++++GGL ++ + +F + GN +++V + D + F F Sbjct: 29 HMRKLFIGGLDYRTTDENLKAHFEK-----WGN-------IVDVVVMKDPRTKRSRGFGF 76 Query: 942 VEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPG 1121 + A +G V+ +R P Q + N GA Sbjct: 77 ITYSHSSMIDEAQKSRPHKIDGRVVEPKRAV-----------PRQDIDSPNAGAT----- 120 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 1301 ++FVG L E +R+ + FG + ++V D+ETG +G+AF + D Sbjct: 121 -------VKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDY 173 Query: 1302 NVTD 1313 + D Sbjct: 174 DPVD 177 Score = 37.7 bits (86), Expect = 0.18 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIA 1319 ++F+GGL Y T+ ++ E +G + ++KD T S+G+ F Y ++ D A Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEA 88
>Q3ZCC5:RBM18_BOVIN Probable RNA-binding protein 18 - Bos taurus (Bovine)| Length = 190 Score = 42.4 bits (98), Expect = 0.007 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%) Frame = +3 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRE---TGNSKGYAFCVY 1292 S G L+ R+++G L TE + LL+ FG ++ FD + + G +GY F + Sbjct: 17 SEGSLQEGHRLWIGNLDPKITEYHLLRLLQKFGTVKQFDFLFHKSGALEGQPRGYCFVNF 76 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRAN 1379 + + A LNG K L VR A+ Sbjct: 77 ETKQEAEQAIQCLNGKLALSKKLVVRWAH 105
>Q76CY5:DAZL_XENTR Deleted in azoospermia-like - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 286 Score = 42.4 bits (98), Expect = 0.007 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF-CVYQDLNVTDIA 1319 P+ +FVGG+ E + L E +G ++ ++ DR TG SKGY F Y +++V I Sbjct: 29 PNTVFVGGIDITMDEMAIGNLFEKYGKVKDLKIITDR-TGVSKGYGFVSFYDEVDVQKIV 87 Query: 1320 CAALN 1334 + +N Sbjct: 88 KSQIN 92
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus laevis| (African clawed frog) Length = 358 Score = 42.0 bits (97), Expect = 0.009 Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 2/178 (1%) Frame = +3 Query: 786 RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVL--NVYINHDKKFAFVEMRSV 959 R++++GGL E+++ ++ Q G T D V+ + + F FV + Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQW----GQLT----DCVVMRDPASKRSRGFGFVTFSCM 60 Query: 960 EEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLE 1139 E AM+ +G V+ +R S ++P ++ + Sbjct: 61 NEVDAAMSARPHTIDGRVVEPKRAVAREES-------AKPGAHVTV-------------- 99 Query: 1140 GPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++FVGG+ E +RE E +G + +++ D+++G +G+ F + D + D Sbjct: 100 --KKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVD 155 Score = 40.8 bits (94), Expect = 0.021 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++F+GGL + TE +R E +G L +++D + S+G+ F + +N D A +A Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 42.0 bits (97), Expect = 0.009 Identities = 39/209 (18%), Positives = 82/209 (39%), Gaps = 3/209 (1%) Frame = +3 Query: 765 QQATRHARRVYVGGLPPTANEQTVAIYFNQV--MAAIGGNTAGPGDAVLNVYINHDKKFA 938 ++ ++ R V+VG LP T N++ + +F + + ++ + P + L KK A Sbjct: 182 EERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLT------KKLA 235 Query: 939 FVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLG-AVGLT 1115 ++ + F + + AAA + + G + + Sbjct: 236 AIKRK---------------FHPDQKSINAYVVFKDESAAAKALQRNGAQIAEGFRIRVD 280 Query: 1116 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 1295 S +FVG LPY ++ + E G + +V++ TG +G+ + +++ Sbjct: 281 LASETASRDKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFE 340 Query: 1296 DLNVTDIACAALNGIKMGDKTLTVRRANQ 1382 + + +A N MG K +R N+ Sbjct: 341 NTDAVHLALKLNNSELMGRKLRVMRSVNK 369
>Q6PBM8:RBM18_DANRE Probable RNA-binding protein 18 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 188 Score = 42.0 bits (97), Expect = 0.009 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Frame = +3 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRE---TGNSKGYAFCVY 1292 S G + R+++G + TE + +LLE FG ++ FD + + G +GY F + Sbjct: 15 SGGSAQDGHRLWIGNIDPKITEYHLVKLLEKFGKVKQFDFLFHKSGPLEGQPRGYCFVNF 74 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQP 1397 + A LNG K L VR A+ +P Sbjct: 75 HTKEEAERAIQCLNGKLALSKKLVVRWAHAQRFEP 109
>Q92904:DAZL_HUMAN Deleted in azoospermia-like - Homo sapiens (Human)| Length = 295 Score = 42.0 bits (97), Expect = 0.009 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF-CVYQDLNVTDIA 1319 P+ +FVGG+ E ++R +G ++ ++ DR TG SKGY F + D++V I Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIV 97 Query: 1320 CAALN----GIKMGDKTLTVRRANQGT--SQPRP 1403 + +N +K+G +R+ N QPRP Sbjct: 98 ESQINFHGKKLKLGP---AIRKQNLCAYHVQPRP 128
>Q9BGN8:DAZL_CALJA Deleted in azoospermia-like - Callithrix jacchus (Common marmoset)| Length = 296 Score = 42.0 bits (97), Expect = 0.009 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 16/132 (12%) Frame = +3 Query: 1056 AALGPSQPNPNLNLGAVGLTPGSAGGLEG---------PDRIFVGGLPYYFTEAQVRELL 1208 +A P PN ++ A SA +G P+ +FVGG+ E ++R Sbjct: 2 SAANPETPNSTISREA-NTQSSSAATSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRGFF 60 Query: 1209 ESFGPLRGFDLVKDRETGNSKGYAF-CVYQDLNVTDIACAALN----GIKMGDKTLTVRR 1373 +G ++ ++ DR TG SKGY F + D++V I + +N +K+G +R+ Sbjct: 61 ARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGP---AIRK 116 Query: 1374 ANQGT--SQPRP 1403 N QPRP Sbjct: 117 QNLCAYHVQPRP 128
>Q4V7Y4:DAZLB_XENLA Deleted in azoospermia-like-B - Xenopus laevis (African clawed frog)| Length = 286 Score = 42.0 bits (97), Expect = 0.009 Identities = 19/52 (36%), Positives = 30/52 (57%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 P+ +FVGG+ E ++R+ FG ++ ++ DR TG SKGY F + D Sbjct: 32 PNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSD 82
>O57437:DAZLA_XENLA Deleted in azoospermia-like-A - Xenopus laevis (African clawed frog)| Length = 286 Score = 42.0 bits (97), Expect = 0.009 Identities = 19/52 (36%), Positives = 30/52 (57%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 P+ +FVGG+ E ++R+ FG ++ ++ DR TG SKGY F + D Sbjct: 32 PNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSD 82
>O13845:RSD1_SCHPO RNA-binding protein rsd1 - Schizosaccharomyces pombe (Fission yeast)| Length = 604 Score = 41.6 bits (96), Expect = 0.012 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%) Frame = +3 Query: 1548 EDILEDMREE-GRKYGNLVK-AVIPRPDPSGAAAVPGVGKVFLEYADIDGSTKAKVGMHG 1721 +++ +D++EE KYG +V AV+P +G++F+++ + D + KA G+H Sbjct: 527 QELEQDVKEECDEKYGKVVHIAVVPNE----------LGQIFVKFENADFAEKAITGLHQ 576 Query: 1722 RKFGGNQVVAVFYPENKF 1775 R FGG + A PE + Sbjct: 577 RWFGGRTIKASILPETDY 594 Score = 36.2 bits (82), Expect = 0.51 Identities = 48/205 (23%), Positives = 76/205 (37%), Gaps = 4/205 (1%) Frame = +3 Query: 777 RHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGP---GDAVLNVYINHDKKFAFVE 947 R R V+V L + + +F Q AGP V + K A+VE Sbjct: 237 RDRRTVFVSQLANRLTSRELYDFFEQ---------AGPVRDAQIVRDKISGRSKGVAYVE 287 Query: 948 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSA 1127 + A+AL G G PV V+ L ++ N A SA Sbjct: 288 FCHEDSVQAAIALSGKRLLGLPVIVQ------------LTEAEKNRKAREAAELARAASA 335 Query: 1128 GGLEGP-DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLN 1304 E P R+ V + + T+ V+ + E FG + L +D + SKG+ + Y++ Sbjct: 336 ---EIPFHRLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPI 391 Query: 1305 VTDIACAALNGIKMGDKTLTVRRAN 1379 A +NG + + + V N Sbjct: 392 SARNALEKMNGFDLAGRNMRVCLGN 416
>Q8ITY4:PM14_CAEEL Pre-mRNA branch site p14-like protein - Caenorhabditis elegans| Length = 138 Score = 41.6 bits (96), Expect = 0.012 Identities = 21/72 (29%), Positives = 38/72 (52%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +++ LPY T ++ E+ FG +R ++ T ++G AF VY+D+ AC L Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQ---IRVGNTAETRGTAFVVYEDIFDAKTACEHL 77 Query: 1332 NGIKMGDKTLTV 1367 +G + ++ L V Sbjct: 78 SGYNVSNRYLVV 89
>Q62826:HNRPM_RAT Heterogeneous nuclear ribonucleoprotein M - Rattus norvegicus (Rat)| Length = 690 Score = 41.6 bits (96), Expect = 0.012 Identities = 28/91 (30%), Positives = 43/91 (47%) Frame = +3 Query: 1098 GAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 1277 GA G PG A +IFV LP+ FT +++ G + D+ E G SKG Sbjct: 600 GAGGHAPGVA---RKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGC 654 Query: 1278 AFCVYQDLNVTDIACAALNGIKMGDKTLTVR 1370 ++ V + AC +NG+K+ + + VR Sbjct: 655 GVVKFESPEVAERACRMMNGMKLSGREIDVR 685
>Q9D0E1:HNRPM_MOUSE Heterogeneous nuclear ribonucleoprotein M - Mus musculus (Mouse)| Length = 729 Score = 41.6 bits (96), Expect = 0.012 Identities = 28/91 (30%), Positives = 43/91 (47%) Frame = +3 Query: 1098 GAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 1277 GA G PG A +IFV LP+ FT +++ G + D+ E G SKG Sbjct: 639 GAGGHAPGVA---RKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGC 693 Query: 1278 AFCVYQDLNVTDIACAALNGIKMGDKTLTVR 1370 ++ V + AC +NG+K+ + + VR Sbjct: 694 GVVKFESPEVAERACRMMNGMKLSGREIDVR 724
>P52272:HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M - Homo sapiens (Human)| Length = 730 Score = 41.6 bits (96), Expect = 0.012 Identities = 28/91 (30%), Positives = 43/91 (47%) Frame = +3 Query: 1098 GAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 1277 GA G PG A +IFV LP+ FT +++ G + D+ E G SKG Sbjct: 640 GAGGHAPGVA---RKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGC 694 Query: 1278 AFCVYQDLNVTDIACAALNGIKMGDKTLTVR 1370 ++ V + AC +NG+K+ + + VR Sbjct: 695 GVVKFESPEVAERACRMMNGMKLSGREIDVR 725
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana (Mouse-ear| cress) Length = 747 Score = 41.6 bits (96), Expect = 0.012 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Frame = +3 Query: 1119 GSAGGLEGPDR-----IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 1283 GS G + DR +FVG +P TE ++R E G + L+KD+ TG +G F Sbjct: 106 GSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCF 165 Query: 1284 CVYQDLNVTDIACAALN 1334 Y D A AL+ Sbjct: 166 VKYATSKDADRAIRALH 182 Score = 40.0 bits (92), Expect = 0.036 Identities = 56/207 (27%), Positives = 79/207 (38%), Gaps = 9/207 (4%) Frame = +3 Query: 789 RVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFA------FVEM 950 +++VG +P TA E+ + YF Q GN VL V + DK+ FV+ Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQ-----HGN-------VLEVALIKDKRTGQQQGCCFVKY 168 Query: 951 RSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSA- 1127 + ++A A+ R +L GP Q V G Sbjct: 169 ATSKDADRAI---------------RALHNQITLPGGTGPVQ---------VRYADGERE 204 Query: 1128 --GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 1301 G LE ++FVG L TE +V E+ FG + L++D E S+G F Y Sbjct: 205 RIGTLEF--KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRD-EYRQSRGCGFVKYSSK 261 Query: 1302 NVTDIACAALNGIKMGDKTLTVRRANQ 1382 A LNG T T+R NQ Sbjct: 262 ETAMAAIDGLNG------TYTMRGCNQ 282
>P53316:YG5B_YEAST Uncharacterized RNA-binding protein YGR250C - Saccharomyces| cerevisiae (Baker's yeast) Length = 781 Score = 41.2 bits (95), Expect = 0.016 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +3 Query: 1143 PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 P IFVGG+ + ++ L +GP+ L+ D+ G GY F Y + + Sbjct: 194 PGNIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCI 253 Query: 1323 AALNGIKMGDKTLTV 1367 LNG + TL + Sbjct: 254 KELNGRTVNGSTLFI 268
>Q57014:RBPA_SYNY3 Putative RNA-binding protein rbpA - Synechocystis sp. (strain PCC| 6803) Length = 101 Score = 41.2 bits (95), Expect = 0.016 Identities = 23/75 (30%), Positives = 37/75 (49%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I+VG L Y +EA + + +G ++ L DRETG +G+ F + A AL Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEAL 62 Query: 1332 NGIKMGDKTLTVRRA 1376 +G + + L V +A Sbjct: 63 DGAEWMGRDLKVNKA 77
>Q66J99:RBM18_XENLA Probable RNA-binding protein 18 - Xenopus laevis (African clawed| frog) Length = 190 Score = 41.2 bits (95), Expect = 0.016 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Frame = +3 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRE---TGNSKGYAFCVY 1292 S G L+ R+++G + TE + +LL+ FG ++ FD + + G +GY F + Sbjct: 17 SEGSLQDGHRLWIGNVDPKITEYHLLKLLQKFGKVKQFDFLFHKSGPLEGQPRGYCFVNF 76 Query: 1293 QDLNVTDIACAALNGIKMGDKTLTVRRAN 1379 + + A LNG K L VR A+ Sbjct: 77 ETKAEAERAIHCLNGKMALSKKLVVRWAH 105
>Q09702:NRD1_SCHPO Negative regulator of differentiation 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 529 Score = 41.2 bits (95), Expect = 0.016 Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 3/189 (1%) Frame = +3 Query: 696 PNMFNFTAPTQFNPLVMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGG 875 PN+ NF AP F + T+ + VYVG LPP +++++ + Sbjct: 94 PNVANF-APGYF--------PLPNNTTQPVKTVYVGNLPPNTP-------IDEILSCV-- 135 Query: 876 NTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS---NAMALDGIMFEGAPVKVRRPTDYNP 1046 GP + + +I +K AF+ A+ AL + G VKV + Sbjct: 136 -RTGP---IESAWILPEKNCAFISFLDPSHATAFFQDAALKRLTIRGTEVKVGWGKNSAS 191 Query: 1047 SLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 1226 + + L Q N +F+G LP TE ++RE LE FGP+ Sbjct: 192 NSSVLLAVQQSGACRN-------------------VFLGNLPNGITEDEIREDLEPFGPI 232 Query: 1227 RGFDLVKDR 1253 +V +R Sbjct: 233 DQIKIVTER 241
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 41.2 bits (95), Expect = 0.016 Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 10/185 (5%) Frame = +3 Query: 888 PGDAVLNVYINHDKK---------FAFVEMRSVEEASNAMA-LDGIMFEGAPVKVRRPTD 1037 PG V V D K F FVE R+ E+A+ A++ LDG + +G ++++ Sbjct: 641 PGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQLK---- 696 Query: 1038 YNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESF 1217 L Q G + S +I + LP+ T + EL +F Sbjct: 697 --------LSHKQ--------GTGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAF 740 Query: 1218 GPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQP 1397 G L+ + K + +++G+AF + + + A + L G+ + + L ++ A Q Sbjct: 741 GQLKSVRVPKKFDQ-SARGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQYAEQDPENA 799 Query: 1398 RPEQE 1412 E E Sbjct: 800 EVEIE 804 Score = 38.5 bits (88), Expect = 0.10 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R+ V GLP Y+TE ++RE G + L+K R G S+ +AF Y+ + + A Sbjct: 3 RLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKR-NGESRKFAFIGYKSADAAERAVKY 61 Query: 1329 LN 1334 N Sbjct: 62 FN 63 Score = 34.7 bits (78), Expect = 1.5 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +3 Query: 1110 LTPGS--AGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 1283 LTP A +E R+F+ + Y +E R L +G L + D TG SKG+ + Sbjct: 296 LTPEEQIAQKIEETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLY 355
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 41.2 bits (95), Expect = 0.016 Identities = 24/88 (27%), Positives = 41/88 (46%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +IFVGG+ + E +G + L+ D++TG S+G+ F Y + D C Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRPEQE 1412 I D+ + ++RA +PR Q+ Sbjct: 304 -KFIDFKDRKIEIKRA-----EPRHMQQ 325 Score = 39.7 bits (91), Expect = 0.047 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 ++F+GGL + TE +RE +G + ++KD TG S+G+ F ++ + D Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214
>Q6DGV1:CELF4_DANRE CUG-BP- and ETR-3-like factor 4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 520 Score = 41.2 bits (95), Expect = 0.016 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++F+G +P E +R L E FG + ++KDR TG KG AF Y Sbjct: 48 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTY 95 Score = 40.0 bits (92), Expect = 0.036 Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 15/100 (15%) Frame = +3 Query: 1140 GPDR-IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDI 1316 G DR +FVG L E VR L ESFG + +++ + GNSKG AF Y Sbjct: 132 GEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPD-GNSKGCAFVKYSTHAEAQA 190 Query: 1317 ACAALNG------------IKMG--DKTLTVRRANQGTSQ 1394 A +AL+G +K DK T+RR Q Q Sbjct: 191 AISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQ 230
>P53927:YNL0_YEAST Uncharacterized RNA-binding protein YNL110C - Saccharomyces| cerevisiae (Baker's yeast) Length = 220 Score = 40.8 bits (94), Expect = 0.021 Identities = 23/78 (29%), Positives = 40/78 (51%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I+V LP+ F E ++ + FG L+ L ++++TGNS+ Y F + + IA ++ Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152 Query: 1332 NGIKMGDKTLTVRRANQG 1385 N + L VR +G Sbjct: 153 NNYLLMGHLLQVRVLPKG 170
>Q9V535:RBM8A_DROME RNA-binding protein 8A - Drosophila melanogaster (Fruit fly)| Length = 165 Score = 40.8 bits (94), Expect = 0.021 Identities = 28/86 (32%), Positives = 42/86 (48%) Frame = +3 Query: 1110 LTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCV 1289 L PG +EG +FV + E +++E +G ++ L DR TG SKGYA Sbjct: 62 LEPGPQRSVEGWI-LFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVE 120 Query: 1290 YQDLNVTDIACAALNGIKMGDKTLTV 1367 Y+ A ALNG ++ +T+ V Sbjct: 121 YETHKQALAAKEALNGAEIMGQTIQV 146
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 40.8 bits (94), Expect = 0.021 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 7/131 (5%) Frame = +3 Query: 1011 PVKVRRPTDYNPS----LAAALGPSQPNPNLNLGAVGLTPGSA--GGLEGPDRI-FVGGL 1169 P V P +PS +A Q N + P +A GG E DR+ +VG L Sbjct: 23 PSAVEAPASADPSSEQSVAVEGNSEQAEDNQGENDPSVVPANAITGGRETSDRVLYVGNL 82 Query: 1170 PYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMG 1349 TE +++ + GP+ ++ D+ N YAF Y + +IA LNG ++ Sbjct: 83 DKAITEDILKQYFQVGGPIANIKIMIDKNNKN-VNYAFVEYHQSHDANIALQTLNGKQIE 141 Query: 1350 DKTLTVRRANQ 1382 + + + A Q Sbjct: 142 NNIVKINWAFQ 152
>Q6NVP7:PABP2_XENTR Polyadenylate-binding protein 2 - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 296 Score = 40.8 bits (94), Expect = 0.021 Identities = 25/101 (24%), Positives = 46/101 (45%) Frame = +3 Query: 720 PTQFNPLVMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDA 899 P P++M ++ ++ AR +YVG + A + + +F+ G + Sbjct: 144 PGNAGPVIM---SIEEKMEADARSIYVGNVDYGATAEELEAHFH------GCGSVNRVTI 194 Query: 900 VLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKV 1022 + + Y H K FA++E E ++ALD +F G +KV Sbjct: 195 LCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKV 235
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 486 Score = 40.8 bits (94), Expect = 0.021 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 ++FVG +P E ++ L E FG + ++KDR TG KG AF Y Sbjct: 48 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTY 95 Score = 33.9 bits (76), Expect = 2.6 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 14/111 (12%) Frame = +3 Query: 1104 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 1283 + + P + G ++FVG L +E +V + ++FG + +++ + G+SKG AF Sbjct: 121 IQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPD-GSSKGCAF 179 Query: 1284 CVYQDLNVTDIACAALNG------------IKMG--DKTLTVRRANQGTSQ 1394 + A AL+G +K DK T+RR Q Q Sbjct: 180 VKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQ 230
>Q09100:RNP24_SCHPO RNA-binding protein rnp24 - Schizosaccharomyces pombe (Fission yeast)| Length = 369 Score = 40.4 bits (93), Expect = 0.027 Identities = 30/127 (23%), Positives = 56/127 (44%) Frame = +3 Query: 924 DKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGA 1103 +K FA+V+ + + A+ G + ++ TD++ PS+P L+ A Sbjct: 164 NKGFAYVDFATEDALKLALQCSEKALNGRNILIKSNTDFSGR------PSKPANTLSKTA 217 Query: 1104 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 1283 + E +FVG L + T+A ++E G +R L+ +TG KG+ F Sbjct: 218 ----SIQSSKKEPSSILFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGF 273 Query: 1284 CVYQDLN 1304 + D++ Sbjct: 274 VDFPDID 280
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 40.4 bits (93), Expect = 0.027 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 3/205 (1%) Frame = +3 Query: 747 QPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAA-IGGNTAGPGDAVLNVYINH 923 Q ++ R ++ + V L A+E+T+ F + + + N G Sbjct: 448 QQESQKGGGERESKTLIVNNLSYAASEETLQELFKKATSIKMPQNNQG-----------R 496 Query: 924 DKKFAFVEMRSVEEASNAM-ALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLG 1100 K +AFVE + E+A A+ + + EG +++ + PS N+N Sbjct: 497 PKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSS-----------PSWQKGNMN-- 543 Query: 1101 AVGLTPGSAGGLEGPDR-IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 1277 + GG + +FV GL TE +RE E R +V DR+TG+SKG+ Sbjct: 544 -------ARGGFNQQSKTLFVRGLSEDTTEETLRESFEGSISAR---IVTDRDTGSSKGF 593 Query: 1278 AFCVYQDLNVTDIACAALNGIKMGD 1352 F D + + A AA ++ G+ Sbjct: 594 GFV---DFSSPEDAKAAKEAMEDGE 615
>Q75A83:MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 - Ashbya gossypii| (Yeast) (Eremothecium gossypii) Length = 838 Score = 40.4 bits (93), Expect = 0.027 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 5/160 (3%) Frame = +3 Query: 918 NHDKK----FAFVEMRSVEEASNAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPN 1082 N DKK F F+E R+ E+A +A +DG + +G ++++ + S P Sbjct: 651 NSDKKLSMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKISHKQS---------SLPK 701 Query: 1083 PNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 1262 + GS + G +I V LP+ T V EL SFG L+ + K + Sbjct: 702 TS---------KGSKKKISG--KIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDK- 749 Query: 1263 NSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQ 1382 +++G+AF + + + A L G+ + + L ++ A Q Sbjct: 750 SARGFAFVEFLLPSEAENAMDQLQGVHLLGRRLVMQYAEQ 789 Score = 37.7 bits (86), Expect = 0.18 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 R+F+ + Y TE ++L +G L + D TG SKG+A+ +++D Sbjct: 302 RLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKD 351
>Q6PDU1:SFRS2_RAT Splicing factor, arginine/serine-rich 2 - Rattus norvegicus (Rat)| Length = 221 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +EG + V L Y + +R + E +G + + +DR T S+G+AF + D + Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69 Query: 1314 IACAALNGIKMGDKTLTVRRANQG 1385 A A++G + + L V+ A G Sbjct: 70 DAMDAMDGAVLDGRELRVQMARYG 93
>Q06A98:SFRS2_PIG Splicing factor, arginine/serine-rich 2 - Sus scrofa (Pig)| Length = 221 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +EG + V L Y + +R + E +G + + +DR T S+G+AF + D + Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69 Query: 1314 IACAALNGIKMGDKTLTVRRANQG 1385 A A++G + + L V+ A G Sbjct: 70 DAMDAMDGAVLDGRELRVQMARYG 93
>Q5R1W5:SFRS2_PANTR Splicing factor, arginine/serine-rich 2 - Pan troglodytes| (Chimpanzee) Length = 221 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +EG + V L Y + +R + E +G + + +DR T S+G+AF + D + Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69 Query: 1314 IACAALNGIKMGDKTLTVRRANQG 1385 A A++G + + L V+ A G Sbjct: 70 DAMDAMDGAVLDGRELRVQMARYG 93
>Q62093:SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 - Mus musculus (Mouse)| Length = 221 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +EG + V L Y + +R + E +G + + +DR T S+G+AF + D + Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69 Query: 1314 IACAALNGIKMGDKTLTVRRANQG 1385 A A++G + + L V+ A G Sbjct: 70 DAMDAMDGAVLDGRELRVQMARYG 93
>Q01130:SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 - Homo sapiens (Human)| Length = 221 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +EG + V L Y + +R + E +G + + +DR T S+G+AF + D + Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69 Query: 1314 IACAALNGIKMGDKTLTVRRANQG 1385 A A++G + + L V+ A G Sbjct: 70 DAMDAMDGAVLDGRELRVQMARYG 93
>P30352:SFRS2_CHICK Splicing factor, arginine/serine-rich 2 - Gallus gallus (Chicken)| Length = 221 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +EG + V L Y + +R + E +G + + +DR T S+G+AF + D + Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69 Query: 1314 IACAALNGIKMGDKTLTVRRANQG 1385 A A++G + + L V+ A G Sbjct: 70 DAMDAMDGAVLDGRELRVQMARYG 93
>Q3MHR5:SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 - Bos taurus (Bovine)| Length = 221 Score = 40.0 bits (92), Expect = 0.036 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +3 Query: 1134 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 1313 +EG + V L Y + +R + E +G + + +DR T S+G+AF + D + Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69 Query: 1314 IACAALNGIKMGDKTLTVRRANQG 1385 A A++G + + L V+ A G Sbjct: 70 DAMDAMDGAVLDGRELRVQMARYG 93
>Q91YE7:RBM5_MOUSE RNA-binding protein 5 - Mus musculus (Mouse)| Length = 815 Score = 40.0 bits (92), Expect = 0.036 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESF-GPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 I + GLP TE+ +RE++ESF GP + R+TG S+G+AF + L A Sbjct: 100 IMLRGLPITITESDIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQ------DA 153 Query: 1329 LNGIKMGDKTLTV--RRANQGTSQPRPEQE 1412 + ++ K L + + S PRP+ E Sbjct: 154 TSWMEANQKKLVIQGKHIAMHYSNPRPKFE 183
>P52756:RBM5_HUMAN RNA-binding protein 5 - Homo sapiens (Human)| Length = 815 Score = 40.0 bits (92), Expect = 0.036 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESF-GPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 I + GLP TE+ +RE++ESF GP + R+TG S+G+AF + L A Sbjct: 100 IMLRGLPITITESDIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQ------DA 153 Query: 1329 LNGIKMGDKTLTV--RRANQGTSQPRPEQE 1412 + ++ K L + + S PRP+ E Sbjct: 154 TSWMEANQKKLVIQGKHIAMHYSNPRPKFE 183
>Q1RMU5:RBM5_BOVIN RNA-binding protein 5 - Bos taurus (Bovine)| Length = 815 Score = 40.0 bits (92), Expect = 0.036 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESF-GPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 I + GLP TE+ +RE++ESF GP + R+TG S+G+AF + L A Sbjct: 100 IMLRGLPITITESDIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQ------DA 153 Query: 1329 LNGIKMGDKTLTV--RRANQGTSQPRPEQE 1412 + ++ K L + + S PRP+ E Sbjct: 154 TSWMEANQKKLVIQGKHIAMHYSNPRPKFE 183
>P57052:RBM11_HUMAN Putative RNA-binding protein 11 - Homo sapiens (Human)| Length = 281 Score = 40.0 bits (92), Expect = 0.036 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%) Frame = +3 Query: 1137 EGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDI 1316 E +FVG L E + EL GPL + KDRE G K + F ++ Sbjct: 7 EADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSY 65 Query: 1317 ACAALNGIKMGDKTLTV--RRANQGTSQP 1397 A A LNGI++ + + V R + +S+P Sbjct: 66 AIALLNGIRLYGRPINVQYRFGSSRSSEP 94
>Q28ZX3:PABP2_DROPS Polyadenylate-binding protein 2 - Drosophila pseudoobscura (Fruit| fly) Length = 225 Score = 40.0 bits (92), Expect = 0.036 Identities = 27/106 (25%), Positives = 46/106 (43%) Frame = +3 Query: 738 LVMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYI 917 L P ++ ++ R VYVG + A+ + + +F+ G T + N Sbjct: 80 LAAVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFH------GCGTINRVTILCNKAD 133 Query: 918 NHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLA 1055 H K FA++E S E A+A++ +F G +KV P L+ Sbjct: 134 GHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLS 179
>Q7KNF2:PABP2_DROME Polyadenylate-binding protein 2 - Drosophila melanogaster (Fruit fly)| Length = 224 Score = 40.0 bits (92), Expect = 0.036 Identities = 27/106 (25%), Positives = 46/106 (43%) Frame = +3 Query: 738 LVMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYI 917 L P ++ ++ R VYVG + A+ + + +F+ G T + N Sbjct: 80 LATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFH------GCGTINRVTILCNKAD 133 Query: 918 NHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLA 1055 H K FA++E S E A+A++ +F G +KV P L+ Sbjct: 134 GHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLS 179
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 40.0 bits (92), Expect = 0.036 Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Frame = +3 Query: 927 KKFAFVEMRSVEEASNAM-ALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGA 1103 K FAF+E S E+A +AM + + EG +++ P Sbjct: 451 KGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGPQ------------------ 492 Query: 1104 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 1283 G GG +FV GL TE ++E + R +V DR+TG SKG+ F Sbjct: 493 ----GGGRGGSAQSKTLFVRGLSEDTTEETLKEAFDGSVNAR---IVTDRDTGASKGFGF 545 Query: 1284 CVYQDLNVTDIACAALNGIKMGD 1352 D + + A AA ++ G+ Sbjct: 546 V---DFSTAEDAKAAKEAMEDGE 565 Score = 39.7 bits (91), Expect = 0.047 Identities = 31/156 (19%), Positives = 66/156 (42%) Frame = +3 Query: 900 VLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQP 1079 + ++ I + KKF +V+ S EE A+ L G G VK+ + ++ + A + Sbjct: 264 IQDIRIGNSKKFGYVDFSSEEEVEKALKLTGKKILGTEVKIEKAMAFDKNKTAENKKERD 323 Query: 1080 NPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRET 1259 + L FV +PY T +++E+ E+ +R + + Sbjct: 324 SRTL---------------------FVKNIPYSTTVEELQEIFENAKDIR----IPTGKD 358 Query: 1260 GNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTV 1367 G++KG A+ + + + + A G ++ +++ V Sbjct: 359 GSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFV 394
>Q6C2Q7:NOP12_YARLI Nucleolar protein 12 - Yarrowia lipolytica (Candida lipolytica)| Length = 509 Score = 40.0 bits (92), Expect = 0.036 Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 8/166 (4%) Frame = +3 Query: 936 AFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLT 1115 A++ ++V+ A+ L+G +F+G ++V S +P Sbjct: 233 AYIVFKNVKSVKGALTLNGSVFKGFHMRV---------------DSVAHP---------- 267 Query: 1116 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 1295 G + +FVG L + E + E S G + +V+D +T KG+A+ ++ Sbjct: 268 ----GAQDHKRCVFVGALDFEEQEESLWEAFSSCGDVEYVRIVRDPKTNVGKGFAYVQFK 323 Query: 1296 DLNVTDIACAALNGIKMGD--------KTLTVRRANQGTSQPRPEQ 1409 D+N + A LNG + + + L V RA SQ R +Q Sbjct: 324 DVNSVEQA-LLLNGKGINELSKSTTNKRKLRVSRAKSQHSQERAKQ 368
>Q06106:MRD1_YEAST Multiple RNA-binding domain-containing protein 1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 887 Score = 40.0 bits (92), Expect = 0.036 Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 1/151 (0%) Frame = +3 Query: 933 FAFVEMRSVEEASNAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVG 1109 F FVE R+ E+A+ +A +DG + +G ++++ + A+ G ++ N G Sbjct: 711 FGFVEFRTKEQANAVIAAMDGTVIDGHKIQLK----LSHRQASQSGNTKTKSNKKSG--- 763 Query: 1110 LTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCV 1289 +I V LP+ T V EL SFG L+ + K + +++G+AF Sbjct: 764 -------------KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDK-SARGFAFVE 809 Query: 1290 YQDLNVTDIACAALNGIKMGDKTLTVRRANQ 1382 + + A L+G+ + + L ++ A + Sbjct: 810 FLLPKEAENAMDQLHGVHLLGRRLVMQYAEE 840 Score = 37.7 bits (86), Expect = 0.18 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD 1298 R+F+ + Y E R+L FG L + D TG SKG+A+ +++D Sbjct: 346 RLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKD 395
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 40.0 bits (92), Expect = 0.036 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 5/165 (3%) Frame = +3 Query: 933 FAFVEMRSVEEASNAM-ALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVG 1109 F FVE R+ E+A+ + A+DG + +G ++++ + Sbjct: 688 FGFVEFRTKEQATAVISAMDGTVIDGHKIQLK--------------------------LS 721 Query: 1110 LTPGSAGGLEGPD----RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGY 1277 G+AG E +I V LP+ T V EL SFG L+ + K + +++G+ Sbjct: 722 HRQGNAGSQEKKKAKNGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDK-SARGF 780 Query: 1278 AFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGTSQPRPEQE 1412 AF + + A L G+ + + L ++ A Q + E E Sbjct: 781 AFVEFVLPKEAENAMDQLQGVHLLGRRLVMQPAEQEAANAEEELE 825 Score = 37.7 bits (86), Expect = 0.18 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 1292 R+F+ + Y TE ++L +G L+ + D TGNSKG+A+ ++ Sbjct: 326 RLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLF 373
>P78795:IF34_SCHPO Probable eukaryotic translation initiation factor 3 RNA-binding| subunit - Schizosaccharomyces pombe (Fission yeast) Length = 282 Score = 40.0 bits (92), Expect = 0.036 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +3 Query: 1185 EAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNG 1337 E ++R+L FG ++ L KD+ETG +KG+AF Y D + A L+G Sbjct: 215 EEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDG 265
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 39.7 bits (91), Expect = 0.047 Identities = 48/200 (24%), Positives = 74/200 (37%), Gaps = 8/200 (4%) Frame = +3 Query: 792 VYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS 971 +++G L P E + +N + A+ + N Y + + FVE S EAS Sbjct: 95 LWMGELEPWVTEAFIQQVWNTLGKAVKVKL------IRNRYTGMNAGYCFVEFASPHEAS 148 Query: 972 NAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD- 1148 +AM+++ ++P P N L S GGL Sbjct: 149 SAMSMN---------------------------NKPIPGTN-HLFKLNWASGGGLREKSI 180 Query: 1149 ------RIFVGGLPYYFTEAQVRELLES-FGPLRGFDLVKDRETGNSKGYAFCVYQDLNV 1307 IFVG L E V L S + + ++ D +T S+GY F + D N Sbjct: 181 SKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDEND 240 Query: 1308 TDIACAALNGIKMGDKTLTV 1367 A A + G GD+ + V Sbjct: 241 QKSALAEMQGQICGDRPIRV 260 Score = 36.2 bits (82), Expect = 0.51 Identities = 43/195 (22%), Positives = 78/195 (40%), Gaps = 5/195 (2%) Frame = +3 Query: 792 VYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS 971 ++VG L P NE V F A N+ + + N + + FV + Sbjct: 188 IFVGDLSPNVNEFDVYSLF-----ASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQK 242 Query: 972 NAMA-LDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD 1148 +A+A + G + P++V T S A P P +++ VG + + D Sbjct: 243 SALAEMQGQICGDRPIRVGLATP--KSKAHVFSPVNVVP-VSMPPVGFYSAAQPVPQFAD 299 Query: 1149 R----IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDI 1316 +FVGGL + +E +++ L ++FG + + KG F + + +I Sbjct: 300 TANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPP------GKGCGFVQFVNRQSAEI 353 Query: 1317 ACAALNGIKMGDKTL 1361 A L G +G+ + Sbjct: 354 AINQLQGYPLGNSRI 368
>P19018:TRA2_DROME Transformer-2 sex-determining protein - Drosophila melanogaster| (Fruit fly) Length = 264 Score = 39.7 bits (91), Expect = 0.047 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I V GL ++ +VREL +GP+ +V D +T S+G+ F ++ L+ A + Sbjct: 99 IGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSC 158 Query: 1332 NGIKMGDKTLTV 1367 +GI++ + + V Sbjct: 159 SGIEVDGRRIRV 170
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 39.7 bits (91), Expect = 0.047 Identities = 23/75 (30%), Positives = 35/75 (46%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 I+VG L Y TE + + +G ++ L DRETG +G+ F A AL Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEAL 62 Query: 1332 NGIKMGDKTLTVRRA 1376 +G + + L V +A Sbjct: 63 DGAEWMGRDLKVNKA 77
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 39.7 bits (91), Expect = 0.047 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = +3 Query: 1113 TPGSAGGLEG----PDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA 1280 +PG++G P ++F+GGL + + +R+ FG +R +++D T S+G+ Sbjct: 6 SPGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65 Query: 1281 FCVYQD 1298 F + D Sbjct: 66 FVTFAD 71 Score = 37.4 bits (85), Expect = 0.23 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIAC 1322 +IFVGGL V++ E FG + L+ D+ T +G+ F +++ +V + C Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 168
>Q66II8:RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 471 Score = 39.3 bits (90), Expect = 0.061 Identities = 16/48 (33%), Positives = 30/48 (62%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 1295 +FV + Y TE+++R E +GP++ +V ++ +G +GYAF Y+ Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYE 152
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 39.3 bits (90), Expect = 0.061 Identities = 22/90 (24%), Positives = 45/90 (50%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 ++++GGL E +++ SF + ++ ++ TG S+GY F + + + A +A Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91 Query: 1329 LNGIKMGDKTLTVRRANQGTSQPRPEQETI 1418 +NG ++ ++V A S P E+I Sbjct: 92 MNGQELNGFNISVNVAKDWPSLPLSLDESI 121
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 39.3 bits (90), Expect = 0.061 Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 1/193 (0%) Frame = +3 Query: 792 VYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEAS 971 +YVG L P+ E + FN + DAV + +A+V ++E+ Sbjct: 82 LYVGELDPSVTEAMLFELFNSIGPVASIRVCR--DAVTRRSLG----YAYVNFHNMEDGE 135 Query: 972 NAM-ALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPD 1148 A+ L+ + +G P ++ SQ +P+L G Sbjct: 136 KALDELNYTLIKGRPCRIMW--------------SQRDPSLRKMGTG------------- 168 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 +F+ L + + +FG + + D E GN+KGY F + + + A Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEH 227 Query: 1329 LNGIKMGDKTLTV 1367 +NG+ + DK + V Sbjct: 228 VNGMLLNDKKVYV 240 Score = 38.5 bits (88), Expect = 0.10 Identities = 38/131 (29%), Positives = 54/131 (41%) Frame = +3 Query: 942 VEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPG 1121 VE + EE+SN + E P K P AA S P N +V G Sbjct: 25 VESSTKEESSNTPST-----ETQPEKKAE----EPEAAAEPSESTSTPT-NASSVATPSG 74 Query: 1122 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 1301 +A ++VG L TEA + EL S GP+ + +D T S GYA+ + ++ Sbjct: 75 TAPTSAS---LYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNM 131 Query: 1302 NVTDIACAALN 1334 + A LN Sbjct: 132 EDGEKALDELN 142 Score = 32.3 bits (72), Expect = 7.4 Identities = 21/77 (27%), Positives = 33/77 (42%) Frame = +3 Query: 1152 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 1331 +++ L TE + +L FG + LVKD + +G+ F Y + A L Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD-QNDKPRGFGFVNYANHECAQKAVDEL 321 Query: 1332 NGIKMGDKTLTVRRANQ 1382 N + K L V RA + Sbjct: 322 NDKEYKGKKLYVGRAQK 338
>Q8CCS6:PABP2_MOUSE Polyadenylate-binding protein 2 - Mus musculus (Mouse)| Length = 302 Score = 39.3 bits (90), Expect = 0.061 Identities = 24/101 (23%), Positives = 46/101 (45%) Frame = +3 Query: 720 PTQFNPLVMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDA 899 P P++M ++ ++ AR +YVG + A + + +F+ G + Sbjct: 149 PGNAGPVIM---SLEEKMEADARSIYVGNVDYGATAEELEAHFH------GCGSVNRVTI 199 Query: 900 VLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKV 1022 + + + H K FA++E E ++ALD +F G +KV Sbjct: 200 LCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKV 240
>Q7ZXB8:PAB2B_XENLA Polyadenylate-binding protein 2-B - Xenopus laevis (African clawed| frog) Length = 295 Score = 39.3 bits (90), Expect = 0.061 Identities = 24/101 (23%), Positives = 46/101 (45%) Frame = +3 Query: 720 PTQFNPLVMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDA 899 P P++M ++ ++ AR +YVG + A + + +F+ G + Sbjct: 143 PGNAGPVIM---SVEEKMEADARSIYVGNVDYGATAEELEAHFH------GCGSVNRVTI 193 Query: 900 VLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKV 1022 + + + H K FA++E E ++ALD +F G +KV Sbjct: 194 LCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKV 234
>Q5FVM4:NONO_RAT Non-POU domain-containing octamer-binding protein - Rattus norvegicus| (Rat) Length = 476 Score = 39.3 bits (90), Expect = 0.061 Identities = 26/81 (32%), Positives = 39/81 (48%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R+FVG LP TE ++R+L E +G + KD KG+ F + + +IA Sbjct: 80 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVE 133 Query: 1329 LNGIKMGDKTLTVRRANQGTS 1391 L+ + + K L VR A S Sbjct: 134 LDNMPLRGKQLRVRFACHSAS 154
>Q5RFL9:NONO_PONPY Non-POU domain-containing octamer-binding protein - Pongo pygmaeus| (Orangutan) Length = 471 Score = 39.3 bits (90), Expect = 0.061 Identities = 26/81 (32%), Positives = 39/81 (48%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R+FVG LP TE ++R+L E +G + KD KG+ F + + +IA Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVE 128 Query: 1329 LNGIKMGDKTLTVRRANQGTS 1391 L+ + + K L VR A S Sbjct: 129 LDNMPLRGKQLRVRFACHSAS 149
>Q99K48:NONO_MOUSE Non-POU domain-containing octamer-binding protein - Mus musculus| (Mouse) Length = 473 Score = 39.3 bits (90), Expect = 0.061 Identities = 26/81 (32%), Positives = 39/81 (48%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R+FVG LP TE ++R+L E +G + KD KG+ F + + +IA Sbjct: 77 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVE 130 Query: 1329 LNGIKMGDKTLTVRRANQGTS 1391 L+ + + K L VR A S Sbjct: 131 LDNMPLRGKQLRVRFACHSAS 151
>Q15233:NONO_HUMAN Non-POU domain-containing octamer-binding protein - Homo sapiens| (Human) Length = 471 Score = 39.3 bits (90), Expect = 0.061 Identities = 26/81 (32%), Positives = 39/81 (48%) Frame = +3 Query: 1149 RIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAA 1328 R+FVG LP TE ++R+L E +G + KD KG+ F + + +IA Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVE 128 Query: 1329 LNGIKMGDKTLTVRRANQGTS 1391 L+ + + K L VR A S Sbjct: 129 LDNMPLRGKQLRVRFACHSAS 149 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 327,781,823 Number of extensions: 7468995 Number of successful extensions: 25952 Number of sequences better than 10.0: 453 Number of HSP's gapped: 25765 Number of HSP's successfully gapped: 600 Length of query: 657 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 537 Effective length of database: 67,771,039 Effective search space: 36393047943 Effective search space used: 36393047943 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
