ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf67l09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT829786.1| Oryza sativa (indica cultivar-group) cDNA clone:... 289 9e-75
2emb|CT829785.1| Oryza sativa (indica cultivar-group) cDNA clone:... 289 9e-75
3ref|NM_001062657.1| Oryza sativa (japonica cultivar-group) Os05g... 281 2e-72
4dbj|AK063846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 2e-72
5emb|CT837961.1| Oryza sativa (indica cultivar-group) cDNA clone:... 218 3e-53
6dbj|AK240687.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 218 3e-53
7ref|NM_001050682.1| Oryza sativa (japonica cultivar-group) Os01g... 200 6e-48
8gb|DQ246071.1| Zea mays clone 14123 mRNA sequence 168 2e-38
9gb|DQ244674.1| Zea mays clone 10004 mRNA sequence 129 2e-26
10gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome... 119 2e-23
11gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome... 119 2e-23
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 119 2e-23
13dbj|AK122038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 2e-23
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 101 4e-18
15dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic D... 101 4e-18
16ref|NM_101557.1| Arabidopsis thaliana unknown protein (AT1G16960... 64 1e-06
17gb|BT015016.1| Arabidopsis thaliana At1g16960 mRNA, complete cds 64 1e-06
18gb|BT014794.1| Arabidopsis thaliana At1g16960 gene, complete cds 64 1e-06
19emb|BX817534.1|CNS0ABAF Arabidopsis thaliana Full-length cDNA Co... 64 1e-06
20gb|DQ245399.1| Zea mays clone 15085 mRNA sequence 52 0.004
21emb|CT830538.1| Oryza sativa (indica cultivar-group) cDNA clone:... 52 0.004
22ref|NM_001069470.1| Oryza sativa (japonica cultivar-group) Os09g... 52 0.004
23ref|NM_104219.3| Arabidopsis thaliana unknown protein (AT1G53400... 52 0.004
24gb|AY059126.1| Arabidopsis thaliana unknown protein (At1g53400) ... 52 0.004
25gb|AF370164.1| Arabidopsis thaliana unknown protein (At1g53400) ... 52 0.004
26dbj|AK121772.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.004
27emb|BX813974.1|CNS0ACBQ Arabidopsis thaliana Full-length cDNA Co... 52 0.004
28emb|BX815106.1|CNS0ABIU Arabidopsis thaliana Full-length cDNA Co... 52 0.004
29emb|BX815738.1|CNS0ABBO Arabidopsis thaliana Full-length cDNA Co... 52 0.004
30dbj|AK059121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.004
31ref|NM_001002718.1| Danio rerio ubiquitin domain containing 2 (u... 48 0.058
32dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.058
33dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.058
34emb|BX818443.1|CNS0ABAY Arabidopsis thaliana Full-length cDNA Co... 48 0.058
35ref|NM_123941.1| Arabidopsis thaliana unknown protein (AT5G45740... 46 0.23
36gb|BT012072.1| Arabidopsis thaliana At5g45740 mRNA sequence 46 0.23
37dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 46 0.23
38gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17... 46 0.23
39gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I... 46 0.23
40gb|EF043991.1| Synthetic construct clone ATCC 10627639 CDKL3 mRN... 44 0.90
41dbj|AK166428.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 44 0.90
42dbj|AK046394.1| Mus musculus adult male corpora quadrigemina cDN... 44 0.90
43dbj|AK050990.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 44 0.90
44ref|NM_153785.2| Mus musculus cyclin-dependent kinase-like 3 (Cd... 44 0.90
45dbj|AK045036.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 44 0.90
46dbj|AK090045.1| Mus musculus CRL-2116 JC cDNA, RIKEN full-length... 44 0.90
47dbj|AK078804.1| Mus musculus 16 days embryo lung cDNA, RIKEN ful... 44 0.90
48dbj|AK210497.1| Mus musculus cDNA, clone:Y2G0118K04, strand:minu... 44 0.90
49gb|AF463770.1| Mus musculus strain C57BL/6J cytokine gene cluste... 44 0.90
50dbj|AB012245.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.90
51gb|BC028871.1| Mus musculus cyclin-dependent kinase-like 3, mRNA... 44 0.90
52emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on ch... 44 0.90
53gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2... 42 3.5
54dbj|AK186403.1| Mus musculus cDNA, clone:Y0G0137D13, strand:plus... 42 3.5
55gb|AF240786.1|AF240786 Homo sapiens glutathione S-transferase th... 42 3.5
56emb|Z84718.2|HS322B1 Human DNA sequence from clone CTA-322B1 on ... 42 3.5
57gb|AC136187.2| Homo sapiens 12 BAC RP11-434D23 (Roswell Park Can... 42 3.5
58dbj|AP000351.3| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 42 3.5

>emb|CT829786.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI022B24, full
           insert sequence
          Length = 623
 Score =  289 bits (146), Expect = 9e-75
 Identities = 281/326 (86%)
 Strand = Plus / Plus

                                                                       
Query: 118 gccatgggctgcgccggatccacgcccaaagtcgatgagagcagtaagaacctaaggaag 177
           |||||||||||||| |||||||| |||||||| ||||||| ||||||||| || |  |||
Sbjct: 149 gccatgggctgcgctggatccactcccaaagttgatgagaacagtaagaagctcaaaaag 208

                                                                       
Query: 178 cctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgtgat 237
           || ||||||||||||||||| ||| ||||||||||| | ||||||  | |||||||||| 
Sbjct: 209 ccaaaaccttggaagcacactcaggcaataacaccaacacaactctcaaagatgcgtgaa 268

                                                                       
Query: 238 gaattctgggacacggctccacactatggcggacagaaagagatttgggatgcgcttcag 297
           ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||  |
Sbjct: 269 gaattctgggacacggctccacactatggaggccagaaagagatttgggatgcacttagg 328

                                                                       
Query: 298 gccgcgacagaagctgatttaactcttgcgcagaccatagtggacagtgctggaatcatc 357
           || ||  | |||||||| ||| ||||||| || ||||||||| |||||||||| || || 
Sbjct: 329 gctgctgctgaagctgaattacctcttgcacaaaccatagtgaacagtgctgggattatt 388

                                                                       
Query: 358 gtttcgaatcctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcct 417
           ||||| ||| ||||| | ||||||||||| |||||||||||||| |||||||||||||| 
Sbjct: 389 gtttcaaattctgacatgacgctttgttatgacgagagaggtgccaagtatgaactgccc 448

                                     
Query: 418 aattatgttctgagtgagcccacaaa 443
           || || ||| |||||||||| |||||
Sbjct: 449 aagtacgttttgagtgagccaacaaa 474



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 55 ctcccgccgcgagatccggctccgcctccg 84
          ||||||||||||||||||||||||| ||||
Sbjct: 63 ctcccgccgcgagatccggctccgcttccg 92



to top

>emb|CT829785.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI015H21, full
           insert sequence
          Length = 572

 Score =  289 bits (146), Expect = 9e-75
 Identities = 281/326 (86%)
 Strand = Plus / Plus

                                                                       
Query: 118 gccatgggctgcgccggatccacgcccaaagtcgatgagagcagtaagaacctaaggaag 177
           |||||||||||||| |||||||| |||||||| ||||||| ||||||||| || |  |||
Sbjct: 103 gccatgggctgcgctggatccactcccaaagttgatgagaacagtaagaagctcaaaaag 162

                                                                       
Query: 178 cctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgtgat 237
           || ||||||||||||||||| ||| ||||||||||| | ||||||  | |||||||||| 
Sbjct: 163 ccaaaaccttggaagcacactcaggcaataacaccaacacaactctcaaagatgcgtgaa 222

                                                                       
Query: 238 gaattctgggacacggctccacactatggcggacagaaagagatttgggatgcgcttcag 297
           ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||  |
Sbjct: 223 gaattctgggacacggctccacactatggaggccagaaagagatttgggatgcacttagg 282

                                                                       
Query: 298 gccgcgacagaagctgatttaactcttgcgcagaccatagtggacagtgctggaatcatc 357
           || ||  | |||||||| ||| ||||||| || ||||||||| |||||||||| || || 
Sbjct: 283 gctgctgctgaagctgaattacctcttgcacaaaccatagtgaacagtgctgggattatt 342

                                                                       
Query: 358 gtttcgaatcctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcct 417
           ||||| ||| ||||| | ||||||||||| |||||||||||||| |||||||||||||| 
Sbjct: 343 gtttcaaattctgacatgacgctttgttatgacgagagaggtgccaagtatgaactgccc 402

                                     
Query: 418 aattatgttctgagtgagcccacaaa 443
           || || ||| |||||||||| |||||
Sbjct: 403 aagtacgttttgagtgagccaacaaa 428



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 55 ctcccgccgcgagatccggctccgcctccg 84
          ||||||||||||||||||||||||| ||||
Sbjct: 17 ctcccgccgcgagatccggctccgcttccg 46



to top

>ref|NM_001062657.1| Oryza sativa (japonica cultivar-group) Os05g0529400 (Os05g0529400)
           mRNA, complete cds
          Length = 670

 Score =  281 bits (142), Expect = 2e-72
 Identities = 280/326 (85%)
 Strand = Plus / Plus

                                                                       
Query: 118 gccatgggctgcgccggatccacgcccaaagtcgatgagagcagtaagaacctaaggaag 177
           |||||||||||||| |||||||| |||||||| ||||||| ||||||||| || |  |||
Sbjct: 200 gccatgggctgcgctggatccactcccaaagttgatgagaacagtaagaagctcaaaaag 259

                                                                       
Query: 178 cctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgtgat 237
           || ||||||||||||||||| ||| ||||||||||| | ||||||  | |||||||||| 
Sbjct: 260 ccaaaaccttggaagcacactcaggcaataacaccaacacaactctcaaagatgcgtgaa 319

                                                                       
Query: 238 gaattctgggacacggctccacactatggcggacagaaagagatttgggatgcgcttcag 297
           ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||  |
Sbjct: 320 gaattctgggacacggctccacactatggaggccagaaagagatttgggatgcacttagg 379

                                                                       
Query: 298 gccgcgacagaagctgatttaactcttgcgcagaccatagtggacagtgctggaatcatc 357
           || ||  | |||||||| ||| ||||||| || ||||||||| |||||||||| ||  | 
Sbjct: 380 gctgctgctgaagctgaattacctcttgcacaaaccatagtgaacagtgctgggattgtt 439

                                                                       
Query: 358 gtttcgaatcctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcct 417
           ||||| ||| ||||| | ||||||||||| |||||||||||||| |||||||||||||| 
Sbjct: 440 gtttcaaattctgacatgacgctttgttatgacgagagaggtgccaagtatgaactgccc 499

                                     
Query: 418 aattatgttctgagtgagcccacaaa 443
           || || ||| |||||||||| |||||
Sbjct: 500 aagtacgttttgagtgagccaacaaa 525



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 55  ctcccgccgcgagatccggctccgcctccg 84
           ||||||||||||||||||||||||| ||||
Sbjct: 114 ctcccgccgcgagatccggctccgcttccg 143



to top

>dbj|AK063846.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-C06, full
           insert sequence
          Length = 670

 Score =  281 bits (142), Expect = 2e-72
 Identities = 280/326 (85%)
 Strand = Plus / Plus

                                                                       
Query: 118 gccatgggctgcgccggatccacgcccaaagtcgatgagagcagtaagaacctaaggaag 177
           |||||||||||||| |||||||| |||||||| ||||||| ||||||||| || |  |||
Sbjct: 200 gccatgggctgcgctggatccactcccaaagttgatgagaacagtaagaagctcaaaaag 259

                                                                       
Query: 178 cctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgtgat 237
           || ||||||||||||||||| ||| ||||||||||| | ||||||  | |||||||||| 
Sbjct: 260 ccaaaaccttggaagcacactcaggcaataacaccaacacaactctcaaagatgcgtgaa 319

                                                                       
Query: 238 gaattctgggacacggctccacactatggcggacagaaagagatttgggatgcgcttcag 297
           ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||  |
Sbjct: 320 gaattctgggacacggctccacactatggaggccagaaagagatttgggatgcacttagg 379

                                                                       
Query: 298 gccgcgacagaagctgatttaactcttgcgcagaccatagtggacagtgctggaatcatc 357
           || ||  | |||||||| ||| ||||||| || ||||||||| |||||||||| ||  | 
Sbjct: 380 gctgctgctgaagctgaattacctcttgcacaaaccatagtgaacagtgctgggattgtt 439

                                                                       
Query: 358 gtttcgaatcctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcct 417
           ||||| ||| ||||| | ||||||||||| |||||||||||||| |||||||||||||| 
Sbjct: 440 gtttcaaattctgacatgacgctttgttatgacgagagaggtgccaagtatgaactgccc 499

                                     
Query: 418 aattatgttctgagtgagcccacaaa 443
           || || ||| |||||||||| |||||
Sbjct: 500 aagtacgttttgagtgagccaacaaa 525



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 55  ctcccgccgcgagatccggctccgcctccg 84
           ||||||||||||||||||||||||| ||||
Sbjct: 114 ctcccgccgcgagatccggctccgcttccg 143



to top

>emb|CT837961.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI017C03, full
           insert sequence
          Length = 728

 Score =  218 bits (110), Expect = 3e-53
 Identities = 272/326 (83%)
 Strand = Plus / Plus

                                                                       
Query: 118 gccatgggctgcgccggatccacgcccaaagtcgatgagagcagtaagaacctaaggaag 177
           |||||||| |||||||||||||| || |||  |||||| | ||| ||||| || |  |||
Sbjct: 184 gccatgggttgcgccggatccacacctaaaaccgatgataacagcaagaagctgaaaaag 243

                                                                       
Query: 178 cctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgtgat 237
           || || |||||||||||||  ||  |||||||| || | |||||||||||||||||||||
Sbjct: 244 cccaagccttggaagcacaatcaagcaataacaacaacacaactcaaacagatgcgtgat 303

                                                                       
Query: 238 gaattctgggacacggctccacactatggcggacagaaagagatttgggatgcgcttcag 297
           |||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||  
Sbjct: 304 gaattctgggacactgctccacattatggtgggcagaaagagatttgggatgcgcttcga 363

                                                                       
Query: 298 gccgcgacagaagctgatttaactcttgcgcagaccatagtggacagtgctggaatcatc 357
           || ||  |||||||||| ||| ||||||| || || |||||||||||||| |||||||| 
Sbjct: 364 gctgctgcagaagctgagttatctcttgcacaaacgatagtggacagtgccggaatcatt 423

                                                                       
Query: 358 gtttcgaatcctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcct 417
           || || ||| ||||| | ||  |||| ||||| || |||||||| || |||||| | || 
Sbjct: 424 gtatcaaattctgacatgacaatttgctacgatgaaagaggtgccaaatatgaattacca 483

                                     
Query: 418 aattatgttctgagtgagcccacaaa 443
           || ||||||||||||||||| |||||
Sbjct: 484 aagtatgttctgagtgagccaacaaa 509



to top

>dbj|AK240687.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043004N04,
           full insert sequence
          Length = 782

 Score =  218 bits (110), Expect = 3e-53
 Identities = 272/326 (83%)
 Strand = Plus / Plus

                                                                       
Query: 118 gccatgggctgcgccggatccacgcccaaagtcgatgagagcagtaagaacctaaggaag 177
           |||||||| |||||||||||||| || |||  |||||| | ||| ||||| || |  |||
Sbjct: 162 gccatgggttgcgccggatccacacctaaaaccgatgataacagcaagaagctgaaaaag 221

                                                                       
Query: 178 cctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgtgat 237
           || || |||||||||||||  ||  |||||||| || | |||||||||||||||||||||
Sbjct: 222 cccaagccttggaagcacaatcaagcaataacaacaacacaactcaaacagatgcgtgat 281

                                                                       
Query: 238 gaattctgggacacggctccacactatggcggacagaaagagatttgggatgcgcttcag 297
           |||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||  
Sbjct: 282 gaattctgggacactgctccacattatggtgggcagaaagagatttgggatgcgcttcga 341

                                                                       
Query: 298 gccgcgacagaagctgatttaactcttgcgcagaccatagtggacagtgctggaatcatc 357
           || ||  |||||||||| ||| ||||||| || || |||||||||||||| |||||||| 
Sbjct: 342 gctgctgcagaagctgagttatctcttgcacaaacgatagtggacagtgccggaatcatt 401

                                                                       
Query: 358 gtttcgaatcctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcct 417
           || || ||| ||||| | ||  |||| ||||| || |||||||| || |||||| | || 
Sbjct: 402 gtatcaaattctgacatgacaatttgctacgatgaaagaggtgccaaatatgaattacca 461

                                     
Query: 418 aattatgttctgagtgagcccacaaa 443
           || ||||||||||||||||| |||||
Sbjct: 462 aagtatgttctgagtgagccaacaaa 487



to top

>ref|NM_001050682.1| Oryza sativa (japonica cultivar-group) Os01g0731000 (Os01g0731000)
           mRNA, complete cds
          Length = 339

 Score =  200 bits (101), Expect = 6e-48
 Identities = 227/269 (84%)
 Strand = Plus / Plus

                                                                       
Query: 175 aagcctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgt 234
           ||||| || |||||||||||||  ||  |||||||| || | ||||||||||||||||||
Sbjct: 52  aagcccaagccttggaagcacaatcaagcaataacaacaacacaactcaaacagatgcgt 111

                                                                       
Query: 235 gatgaattctgggacacggctccacactatggcggacagaaagagatttgggatgcgctt 294
           ||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 112 gatgaattctgggacactgctccacattatggtgggcagaaagagatttgggatgcgctt 171

                                                                       
Query: 295 caggccgcgacagaagctgatttaactcttgcgcagaccatagtggacagtgctggaatc 354
           |  || ||  |||||||||| ||| ||||||| || || |||||||||||||| ||||||
Sbjct: 172 cgagctgctgcagaagctgagttatctcttgcacaaacgatagtggacagtgccggaatc 231

                                                                       
Query: 355 atcgtttcgaatcctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactg 414
           || || || ||| ||||| | ||  |||| ||||| || |||||||| || |||||| | 
Sbjct: 232 attgtatcaaattctgacatgacaatttgctacgatgaaagaggtgccaaatatgaatta 291

                                        
Query: 415 cctaattatgttctgagtgagcccacaaa 443
           || || ||||||||||||||||| |||||
Sbjct: 292 ccaaagtatgttctgagtgagccaacaaa 320



to top

>gb|DQ246071.1| Zea mays clone 14123 mRNA sequence
          Length = 625

 Score =  168 bits (85), Expect = 2e-38
 Identities = 217/261 (83%)
 Strand = Plus / Plus

                                                                       
Query: 184 ccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgtgatgaattc 243
           |||||||||||||||||  ||||||| || || ||||||| |||||||||||||||||| 
Sbjct: 217 ccttggaagcacacccaagcaataacgccggcacaactcagacagatgcgtgatgaattt 276

                                                                       
Query: 244 tgggacacggctccacactatggcggacagaaagagatttgggatgcgcttcaggccgcg 303
           |||||||| ||||| |||||||| |||||||||||||||||||| || |||   ||||| 
Sbjct: 277 tgggacactgctcctcactatggtggacagaaagagatttgggacgcacttagagccgct 336

                                                                       
Query: 304 acagaagctgatttaactcttgcgcagaccatagtggacagtgctggaatcatcgtttcg 363
            ||||  ||||  || | |||||||| ||||||||||| |||||||| |||||||| |||
Sbjct: 337 gcagactctgacctagcgcttgcgcaaaccatagtggatagtgctggcatcatcgtatcg 396

                                                                       
Query: 364 aatcctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcctaattat 423
           ||| ||||| | || ||||| ||||| || |||||||| || ||||| || || || || 
Sbjct: 397 aattctgacatgacactttgctacgatgaaagaggtgccaaatatgagcttccaaagtac 456

                                
Query: 424 gttctgagtgagcccacaaac 444
           ||||| || ||||| ||||||
Sbjct: 457 gttctaagcgagccaacaaac 477



to top

>gb|DQ244674.1| Zea mays clone 10004 mRNA sequence
          Length = 757

 Score =  129 bits (65), Expect = 2e-26
 Identities = 146/173 (84%)
 Strand = Plus / Plus

                                                                       
Query: 118 gccatgggctgcgccggatccacgcccaaagtcgatgagagcagtaagaacctaaggaag 177
           |||||||||||||| |||||||| ||||||||||| |||| ||| ||||| || |  | |
Sbjct: 166 gccatgggctgcgctggatccacccccaaagtcgacgagaacagcaagaaactgaaaagg 225

                                                                       
Query: 178 cctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgtgat 237
           |||||  |||||||||| ||||| ||||| ||||| || |  || |||||||||||||||
Sbjct: 226 cctaaggcttggaagcatacccaaccaattacaccggcacggctgaaacagatgcgtgat 285

                                                                
Query: 238 gaattctgggacacggctccacactatggcggacagaaagagatttgggatgc 290
           || ||||||||||||||||| ||||| || || || |||||||| ||||||||
Sbjct: 286 gagttctgggacacggctccgcactacggaggccaaaaagagatctgggatgc 338



 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                       
Query: 322 cttgcgcagaccatagtggacagtgctggaatcatcgtttcgaatcctgacctcacgctt 381
           ||||| |||||||| ||||||||||||||||||||||| ||||| |||||| | ||||| 
Sbjct: 370 cttgcacagaccatcgtggacagtgctggaatcatcgtgtcgaaccctgacatgacgctc 429

                                                       
Query: 382 tgttacgacgagagaggtgcgaagtatgaactgcctaattatgt 425
           || |||||||||||||| || ||||| || ||||| || |||||
Sbjct: 430 tgctacgacgagagaggcgccaagtacgagctgcccaagtatgt 473



 Score = 44.1 bits (22), Expect = 0.90
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 58  ccgccgcgagatccggctccgc 79
           ||||||||||||||||||||||
Sbjct: 95  ccgccgcgagatccggctccgc 116



to top

>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11,
              complete sequence
          Length = 133352

 Score =  119 bits (60), Expect = 2e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                          
Query: 154    gagagcagtaagaacctaaggaagcctaaaccttggaagcacacccagccaataacacca 213
              |||| ||||||||| || |  ||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 111668 gagaacagtaagaagctcaaaaagccaaaaccttggaagcacactcaggcaataacacca 111727

                                                                          
Query: 214    gcgcaactcaaacagatgcgtgatgaattctgggacacggctccacactatggcggacag 273
               | ||||||  | |||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 111728 acacaactctcaaagatgcgtgaagaattctgggacacggctccacactatggaggccag 111787

                  
Query: 274    aaag 277
              ||||
Sbjct: 111788 aaag 111791



 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 104/125 (83%)
 Strand = Plus / Plus

                                                                          
Query: 276    agagatttgggatgcgcttcaggccgcgacagaagctgatttaactcttgcgcagaccat 335
              ||||||||||||||| |||  ||| ||  | |||||||| ||| ||||||| || |||||
Sbjct: 112165 agagatttgggatgcacttagggctgctgctgaagctgaattacctcttgcacaaaccat 112224

                                                                          
Query: 336    agtggacagtgctggaatcatcgtttcgaatcctgacctcacgctttgttacgacgagag 395
              |||| |||||||||| ||  | ||||| ||| ||||| | ||||||||||| ||||||||
Sbjct: 112225 agtgaacagtgctgggattgttgtttcaaattctgacatgacgctttgttatgacgagag 112284

                   
Query: 396    aggtg 400
              |||||
Sbjct: 112285 aggtg 112289



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 55     ctcccgccgcgagatccggctccgcctccg 84
              ||||||||||||||||||||||||| ||||
Sbjct: 110438 ctcccgccgcgagatccggctccgcttccg 110467



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 118    gccatgggctgcgccggatccacgcccaaagtcgatg 154
              |||||||||||||| |||||||| |||||||| ||||
Sbjct: 110524 gccatgggctgcgctggatccactcccaaagttgatg 110560



 Score = 48.1 bits (24), Expect = 0.058
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 396    aggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaa 443
              |||||| |||||||||||||| || || ||| |||||||||| |||||
Sbjct: 112391 aggtgccaagtatgaactgcccaagtacgttttgagtgagccaacaaa 112438



to top

>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09,
            complete sequence
          Length = 94399

 Score =  119 bits (60), Expect = 2e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                        
Query: 154  gagagcagtaagaacctaaggaagcctaaaccttggaagcacacccagccaataacacca 213
            |||| ||||||||| || |  ||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 4247 gagaacagtaagaagctcaaaaagccaaaaccttggaagcacactcaggcaataacacca 4306

                                                                        
Query: 214  gcgcaactcaaacagatgcgtgatgaattctgggacacggctccacactatggcggacag 273
             | ||||||  | |||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 4307 acacaactctcaaagatgcgtgaagaattctgggacacggctccacactatggaggccag 4366

                
Query: 274  aaag 277
            ||||
Sbjct: 4367 aaag 4370



 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 104/125 (83%)
 Strand = Plus / Plus

                                                                        
Query: 276  agagatttgggatgcgcttcaggccgcgacagaagctgatttaactcttgcgcagaccat 335
            ||||||||||||||| |||  ||| ||  | |||||||| ||| ||||||| || |||||
Sbjct: 4744 agagatttgggatgcacttagggctgctgctgaagctgaattacctcttgcacaaaccat 4803

                                                                        
Query: 336  agtggacagtgctggaatcatcgtttcgaatcctgacctcacgctttgttacgacgagag 395
            |||| |||||||||| ||  | ||||| ||| ||||| | ||||||||||| ||||||||
Sbjct: 4804 agtgaacagtgctgggattgttgtttcaaattctgacatgacgctttgttatgacgagag 4863

                 
Query: 396  aggtg 400
            |||||
Sbjct: 4864 aggtg 4868



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 55   ctcccgccgcgagatccggctccgcctccg 84
            ||||||||||||||||||||||||| ||||
Sbjct: 3017 ctcccgccgcgagatccggctccgcttccg 3046



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 118  gccatgggctgcgccggatccacgcccaaagtcgatg 154
            |||||||||||||| |||||||| |||||||| ||||
Sbjct: 3103 gccatgggctgcgctggatccactcccaaagttgatg 3139



 Score = 48.1 bits (24), Expect = 0.058
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                            
Query: 396  aggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaa 443
            |||||| |||||||||||||| || || ||| |||||||||| |||||
Sbjct: 4970 aggtgccaagtatgaactgcccaagtacgttttgagtgagccaacaaa 5017



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  119 bits (60), Expect = 2e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                            
Query: 154      gagagcagtaagaacctaaggaagcctaaaccttggaagcacacccagccaataacacca 213
                |||| ||||||||| || |  ||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 26086907 gagaacagtaagaagctcaaaaagccaaaaccttggaagcacactcaggcaataacacca 26086966

                                                                            
Query: 214      gcgcaactcaaacagatgcgtgatgaattctgggacacggctccacactatggcggacag 273
                 | ||||||  | |||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 26086967 acacaactctcaaagatgcgtgaagaattctgggacacggctccacactatggaggccag 26087026

                    
Query: 274      aaag 277
                ||||
Sbjct: 26087027 aaag 26087030



 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 104/125 (83%)
 Strand = Plus / Plus

                                                                            
Query: 276      agagatttgggatgcgcttcaggccgcgacagaagctgatttaactcttgcgcagaccat 335
                ||||||||||||||| |||  ||| ||  | |||||||| ||| ||||||| || |||||
Sbjct: 26087404 agagatttgggatgcacttagggctgctgctgaagctgaattacctcttgcacaaaccat 26087463

                                                                            
Query: 336      agtggacagtgctggaatcatcgtttcgaatcctgacctcacgctttgttacgacgagag 395
                |||| |||||||||| ||  | ||||| ||| ||||| | ||||||||||| ||||||||
Sbjct: 26087464 agtgaacagtgctgggattgttgtttcaaattctgacatgacgctttgttatgacgagag 26087523

                     
Query: 396      aggtg 400
                |||||
Sbjct: 26087524 aggtg 26087528



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 55       ctcccgccgcgagatccggctccgcctccg 84
                ||||||||||||||||||||||||| ||||
Sbjct: 26085677 ctcccgccgcgagatccggctccgcttccg 26085706



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 118      gccatgggctgcgccggatccacgcccaaagtcgatg 154
                |||||||||||||| |||||||| |||||||| ||||
Sbjct: 26085763 gccatgggctgcgctggatccactcccaaagttgatg 26085799



 Score = 48.1 bits (24), Expect = 0.058
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 396      aggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaa 443
                |||||| |||||||||||||| || || ||| |||||||||| |||||
Sbjct: 26087630 aggtgccaagtatgaactgcccaagtacgttttgagtgagccaacaaa 26087677



to top

>dbj|AK122038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113C01, full
            insert sequence
          Length = 1503

 Score =  119 bits (60), Expect = 2e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                        
Query: 154  gagagcagtaagaacctaaggaagcctaaaccttggaagcacacccagccaataacacca 213
            |||| ||||||||| || |  ||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 1249 gagaacagtaagaagctcaaaaagccaaaaccttggaagcacactcaggcaataacacca 1308

                                                                        
Query: 214  gcgcaactcaaacagatgcgtgatgaattctgggacacggctccacactatggcggacag 273
             | ||||||  | |||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 1309 acacaactctcaaagatgcgtgaagaattctgggacacggctccacactatggaggccag 1368

                
Query: 274  aaag 277
            ||||
Sbjct: 1369 aaag 1372



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 55 ctcccgccgcgagatccggctccgcctccg 84
          ||||||||||||||||||||||||| ||||
Sbjct: 19 ctcccgccgcgagatccggctccgcttccg 48



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 118 gccatgggctgcgccggatccacgcccaaagtcgatg 154
           |||||||||||||| |||||||| |||||||| ||||
Sbjct: 105 gccatgggctgcgctggatccactcccaaagttgatg 141



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  101 bits (51), Expect = 4e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                            
Query: 175      aagcctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgt 234
                ||||| || |||||||||||||  ||  |||||||| || | ||||||||||||||||||
Sbjct: 30496965 aagcccaagccttggaagcacaatcaagcaataacaacaacacaactcaaacagatgcgt 30496906

                                                           
Query: 235      gatgaattctgggacacggctccacactatggcggacagaaag 277
                ||||||||||||||||| |||||||| ||||| || |||||||
Sbjct: 30496905 gatgaattctgggacactgctccacattatggtgggcagaaag 30496863



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 276      agagatttgggatgcgcttcaggccgcgacagaagctgatttaactcttgcgcagaccat 335
                ||||||||||||||||||||  || ||  |||||||||| ||| ||||||| || || ||
Sbjct: 30496317 agagatttgggatgcgcttcgagctgctgcagaagctgagttatctcttgcacaaacgat 30496258

                                     
Query: 336      agtggacagtgctggaatcat 356
                |||||||||||| ||||||||
Sbjct: 30496257 agtggacagtgccggaatcat 30496237



to top

>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435H01
          Length = 160141

 Score =  101 bits (51), Expect = 4e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                          
Query: 175    aagcctaaaccttggaagcacacccagccaataacaccagcgcaactcaaacagatgcgt 234
              ||||| || |||||||||||||  ||  |||||||| || | ||||||||||||||||||
Sbjct: 125228 aagcccaagccttggaagcacaatcaagcaataacaacaacacaactcaaacagatgcgt 125169

                                                         
Query: 235    gatgaattctgggacacggctccacactatggcggacagaaag 277
              ||||||||||||||||| |||||||| ||||| || |||||||
Sbjct: 125168 gatgaattctgggacactgctccacattatggtgggcagaaag 125126



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                          
Query: 276    agagatttgggatgcgcttcaggccgcgacagaagctgatttaactcttgcgcagaccat 335
              ||||||||||||||||||||  || ||  |||||||||| ||| ||||||| || || ||
Sbjct: 124580 agagatttgggatgcgcttcgagctgctgcagaagctgagttatctcttgcacaaacgat 124521

                                   
Query: 336    agtggacagtgctggaatcat 356
              |||||||||||| ||||||||
Sbjct: 124520 agtggacagtgccggaatcat 124500



to top

>ref|NM_101557.1| Arabidopsis thaliana unknown protein (AT1G16960) mRNA, complete cds
          Length = 345

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 ctcaaacagatgcgtgatgaattctgggacacggctccacactatggcggacagaaagag 279
           |||| ||||||||| || || ||||||||||| ||||| |||||||| ||  ||||||||
Sbjct: 100 ctcacacagatgcgagaggagttctgggacacagctcctcactatggaggcaagaaagag 159

                       
Query: 280 atttgggatgcg 291
           || |||||||||
Sbjct: 160 atatgggatgcg 171



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 368 ctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcctaattatgttc 427
           ||||||||||  ||||||||||||||| |||| | ||||||||| ||||||| || ||||
Sbjct: 251 ctgacctcaccatttgttacgacgagaaaggttccaagtatgaattgcctaaatacgttc 310

            
Query: 428 t 428
           |
Sbjct: 311 t 311



to top

>gb|BT015016.1| Arabidopsis thaliana At1g16960 mRNA, complete cds
          Length = 345

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 ctcaaacagatgcgtgatgaattctgggacacggctccacactatggcggacagaaagag 279
           |||| ||||||||| || || ||||||||||| ||||| |||||||| ||  ||||||||
Sbjct: 100 ctcacacagatgcgagaggagttctgggacacagctcctcactatggaggcaagaaagag 159

                       
Query: 280 atttgggatgcg 291
           || |||||||||
Sbjct: 160 atatgggatgcg 171



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 368 ctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcctaattatgttc 427
           ||||||||||  ||||||||||||||| |||| | ||||||||| ||||||| || ||||
Sbjct: 251 ctgacctcaccatttgttacgacgagaaaggttccaagtatgaattgcctaaatacgttc 310

            
Query: 428 t 428
           |
Sbjct: 311 t 311



to top

>gb|BT014794.1| Arabidopsis thaliana At1g16960 gene, complete cds
          Length = 564

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 ctcaaacagatgcgtgatgaattctgggacacggctccacactatggcggacagaaagag 279
           |||| ||||||||| || || ||||||||||| ||||| |||||||| ||  ||||||||
Sbjct: 158 ctcacacagatgcgagaggagttctgggacacagctcctcactatggaggcaagaaagag 217

                       
Query: 280 atttgggatgcg 291
           || |||||||||
Sbjct: 218 atatgggatgcg 229



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 368 ctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcctaattatgttc 427
           ||||||||||  ||||||||||||||| |||| | ||||||||| ||||||| || ||||
Sbjct: 309 ctgacctcaccatttgttacgacgagaaaggttccaagtatgaattgcctaaatacgttc 368

            
Query: 428 t 428
           |
Sbjct: 369 t 369



to top

>emb|BX817534.1|CNS0ABAF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL29ZE03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 637

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 220 ctcaaacagatgcgtgatgaattctgggacacggctccacactatggcggacagaaagag 279
           |||| ||||||||| || || ||||||||||| ||||| |||||||| ||  ||||||||
Sbjct: 171 ctcacacagatgcgagaggagttctgggacacagctcctcactatggaggcaagaaagag 230

                       
Query: 280 atttgggatgcg 291
           || |||||||||
Sbjct: 231 atatgggatgcg 242



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 368 ctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcctaattatgttc 427
           ||||||||||  ||||||||||||||| |||| | ||||||||| ||||||| || ||||
Sbjct: 322 ctgacctcaccatttgttacgacgagaaaggttccaagtatgaattgcctaaatacgttc 381

            
Query: 428 t 428
           |
Sbjct: 382 t 382



to top

>gb|DQ245399.1| Zea mays clone 15085 mRNA sequence
          Length = 981

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                       
Query: 226 cagatgcgtgatgaattctgggacacggctccacactatggcggacagaaagagatttgg 285
           ||||||||||| || || |||||||| ||||| ||||| || || |||||||| || |||
Sbjct: 234 cagatgcgtgaggagttttgggacaccgctcctcactacggtggtcagaaagaaatctgg 293

                     
Query: 286 gatgcgcttc 295
           ||||| ||||
Sbjct: 294 gatgcccttc 303



to top

>emb|CT830538.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA004F16, full
           insert sequence
          Length = 656

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 394 agaggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaacctg 447
           ||||||||||||||||||||||| || |||||  ||||||| || || ||||||
Sbjct: 312 agaggtgcgaagtatgaactgcccaagtatgtcttgagtgaaccaaccaacctg 365



to top

>ref|NM_001069470.1| Oryza sativa (japonica cultivar-group) Os09g0345000 (Os09g0345000)
           mRNA, complete cds
          Length = 759

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 394 agaggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaacctg 447
           ||||||||||||||||||||||| || |||||  ||||||| || || ||||||
Sbjct: 291 agaggtgcgaagtatgaactgcccaagtatgtcttgagtgaaccaaccaacctg 344



to top

>ref|NM_104219.3| Arabidopsis thaliana unknown protein (AT1G53400) mRNA, complete cds
          Length = 783

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 388 gacgagagaggtgcgaagtatgaactgcctaattatgttctgagtgagcc 437
           |||||||||||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 509 gacgagagaggtgctaagtatgagctacctaagtatgttctaagcgagcc 558



to top

>gb|AY059126.1| Arabidopsis thaliana unknown protein (At1g53400) mRNA, complete cds
          Length = 376

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 388 gacgagagaggtgcgaagtatgaactgcctaattatgttctgagtgagcc 437
           |||||||||||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 271 gacgagagaggtgctaagtatgagctacctaagtatgttctaagcgagcc 320



to top

>gb|AF370164.1| Arabidopsis thaliana unknown protein (At1g53400) mRNA, complete cds
          Length = 730

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 388 gacgagagaggtgcgaagtatgaactgcctaattatgttctgagtgagcc 437
           |||||||||||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 441 gacgagagaggtgctaagtatgagctacctaagtatgttctaagcgagcc 490



to top

>dbj|AK121772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092J09, full
           insert sequence
          Length = 760

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 394 agaggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaacctg 447
           ||||||||||||||||||||||| || |||||  ||||||| || || ||||||
Sbjct: 292 agaggtgcgaagtatgaactgcccaagtatgtcttgagtgaaccaaccaacctg 345



to top

>emb|BX813974.1|CNS0ACBQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB50ZC09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 781

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 388 gacgagagaggtgcgaagtatgaactgcctaattatgttctgagtgagcc 437
           |||||||||||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 507 gacgagagaggtgctaagtatgagctacctaagtatgttctaagcgagcc 556



to top

>emb|BX815106.1|CNS0ABIU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS33ZB06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1174

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 388 gacgagagaggtgcgaagtatgaactgcctaattatgttctgagtgagcc 437
           |||||||||||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 931 gacgagagaggtgctaagtatgagctacctaagtatgttctaagcgagcc 980



to top

>emb|BX815738.1|CNS0ABBO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS8ZC05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1177

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 388 gacgagagaggtgcgaagtatgaactgcctaattatgttctgagtgagcc 437
           |||||||||||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 931 gacgagagaggtgctaagtatgagctacctaagtatgttctaagcgagcc 980



to top

>dbj|AK059121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F03, full
           insert sequence
          Length = 795

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 394 agaggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaacctg 447
           ||||||||||||||||||||||| || |||||  ||||||| || || ||||||
Sbjct: 451 agaggtgcgaagtatgaactgcccaagtatgtcttgagtgaaccaaccaacctg 504



to top

>ref|NM_001002718.1| Danio rerio ubiquitin domain containing 2 (ubtd2), mRNA
 gb|BC076510.1| Danio rerio zgc:91797, mRNA (cDNA clone MGC:91797 IMAGE:6996921),
           complete cds
          Length = 2275

 Score = 48.1 bits (24), Expect = 0.058
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 231 gcgtgatgaattctgggacacggc 254
           ||||||||||||||||||||||||
Sbjct: 275 gcgtgatgaattctgggacacggc 298



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.058
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                    
Query: 396      aggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaacctg 447
                ||||||||||||||||||||| || |||||  ||||||| || || ||||||
Sbjct: 10717760 aggtgcgaagtatgaactgcccaagtatgtcttgagtgaaccaaccaacctg 10717709



to top

>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0085I16
          Length = 141701

 Score = 48.1 bits (24), Expect = 0.058
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 396   aggtgcgaagtatgaactgcctaattatgttctgagtgagcccacaaacctg 447
             ||||||||||||||||||||| || |||||  ||||||| || || ||||||
Sbjct: 54378 aggtgcgaagtatgaactgcccaagtatgtcttgagtgaaccaaccaacctg 54327



to top

>emb|BX818443.1|CNS0ABAY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 637

 Score = 48.1 bits (24), Expect = 0.058
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 368 ctgacctcacgctttgttacgacgagagaggtgcgaagtatgaactgcctaa 419
           ||||||||||  ||||||||||||||| | || | ||||||||| |||||||
Sbjct: 361 ctgacctcaccatttgttacgacgagaaaagttccaagtatgaattgcctaa 412



to top

>ref|NM_123941.1| Arabidopsis thaliana unknown protein (AT5G45740) mRNA, complete cds
          Length = 297

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 229 atgcgtgatgaattctgggacacggctccacactatggcggacagaaagagatttggga 287
           |||||||| ||||| ||||||||  ||||||||||||| || || | |||||| |||||
Sbjct: 58  atgcgtgaggaattttgggacacctctccacactatggtggtcaaagagagatatggga 116



to top

>gb|BT012072.1| Arabidopsis thaliana At5g45740 mRNA sequence
          Length = 294

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 229 atgcgtgatgaattctgggacacggctccacactatggcggacagaaagagatttggga 287
           |||||||| ||||| ||||||||  ||||||||||||| || || | |||||| |||||
Sbjct: 55  atgcgtgaggaattttgggacacctctccacactatggtggtcaaagagagatatggga 113



to top

>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 191    agcacacccagccaataacaccagcgc 217
              |||||||||||||||||| ||||||||
Sbjct: 559021 agcacacccagccaataataccagcgc 558995



to top

>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence,
           complete sequence
          Length = 90498

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 220 ctcaaacagatgcgtgatgaattctgggacacggctccacactatgg 266
           |||| ||||||||| || || ||||||||||| ||||| ||||||||
Sbjct: 709 ctcacacagatgcgagaggagttctgggacacagctcctcactatgg 663



to top

>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete
             sequence
          Length = 93677

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 220   ctcaaacagatgcgtgatgaattctgggacacggctccacactatgg 266
             |||| ||||||||| || || ||||||||||| ||||| ||||||||
Sbjct: 47406 ctcacacagatgcgagaggagttctgggacacagctcctcactatgg 47360



to top

>gb|EF043991.1| Synthetic construct clone ATCC 10627639 CDKL3 mRNA, complete cds
          Length = 1374

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 265 gagctgcagcactactgtcacggact 290



to top

>dbj|AK166428.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN
           full-length enriched library, clone:G930017H24
           product:cyclin-dependent kinase-like 3, full insert
           sequence
          Length = 2684

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 412 gagctgcagcactactgtcacggact 437



to top

>dbj|AK046394.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230379H01
           product:cyclin-dependent kinase-like 3, full insert
           sequence
          Length = 2388

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 571 gagctgcagcactactgtcacggact 596



to top

>dbj|AK050990.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030051A04
           product:cyclin-dependent kinase-like 3, full insert
           sequence
          Length = 1893

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 570 gagctgcagcactactgtcacggact 595



to top

>ref|NM_153785.2| Mus musculus cyclin-dependent kinase-like 3 (Cdkl3), mRNA
 dbj|AK045356.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230105E16
           product:cyclin-dependent kinase-like 3, full insert
           sequence
          Length = 2665

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 470 gagctgcagcactactgtcacggact 495



to top

>dbj|AK045036.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130020N14
           product:cyclin-dependent kinase-like 3, full insert
           sequence
          Length = 2769

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 929 gagctgcagcactactgtcacggact 954



to top

>dbj|AK090045.1| Mus musculus CRL-2116 JC cDNA, RIKEN full-length enriched library,
           clone:G430074B19 product:cyclin-dependent kinase-like 3,
           full insert sequence
          Length = 2005

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 356 gagctgcagcactactgtcacggact 381



to top

>dbj|AK078804.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched
           library, clone:8430406M17 product:cyclin-dependent
           kinase-like 3, full insert sequence
          Length = 2013

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 462 gagctgcagcactactgtcacggact 487



to top

>dbj|AK210497.1| Mus musculus cDNA, clone:Y2G0118K04, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000063321, based on BLAT search
          Length = 401

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 364 gagctgcagcactactgtcacggact 389



to top

>gb|AF463770.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence
          Length = 56726

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 764  gagctgcagcactactgtcactgact 789
            ||||||||||||||||||||| ||||
Sbjct: 7079 gagctgcagcactactgtcacggact 7104



to top

>dbj|AB012245.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRA19
          Length = 86722

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 229   atgcgtgatgaattctgggacacggctccacactatgg 266
             |||||||| ||||| ||||||||  |||||||||||||
Sbjct: 61421 atgcgtgaggaattttgggacacctctccacactatgg 61384



to top

>gb|BC028871.1| Mus musculus cyclin-dependent kinase-like 3, mRNA (cDNA clone
           MGC:28957 IMAGE:4241862), complete cds
          Length = 1620

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 764 gagctgcagcactactgtcactgact 789
           ||||||||||||||||||||| ||||
Sbjct: 442 gagctgcagcactactgtcacggact 467



to top

>emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on chromosome 11, complete
              sequence
          Length = 216776

 Score = 44.1 bits (22), Expect = 0.90
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 764    gagctgcagcactactgtcactgact 789
              ||||||||||||||||||||| ||||
Sbjct: 176942 gagctgcagcactactgtcacggact 176967



to top

>gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2 of 13 of the complete
             sequence
          Length = 254449

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 819   tctatatatagcaataataat 839
             |||||||||||||||||||||
Sbjct: 94791 tctatatatagcaataataat 94771



to top

>dbj|AK186403.1| Mus musculus cDNA, clone:Y0G0137D13, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000063321, based on BLAT search
          Length = 341

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 764 gagctgcagcactactgtcac 784
           |||||||||||||||||||||
Sbjct: 304 gagctgcagcactactgtcac 324



to top

>gb|AF240786.1|AF240786 Homo sapiens glutathione S-transferase theta 2 (GSTT2) and glutathione
             S-transferase theta 1 (GSTT1) genes, complete cds
          Length = 118999

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 757   ctggagagagctgcagcacta 777
             |||||||||||||||||||||
Sbjct: 74664 ctggagagagctgcagcacta 74684



to top

>emb|Z84718.2|HS322B1 Human DNA sequence from clone CTA-322B1 on chromosome 22q11-12,
             complete sequence
          Length = 76798

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 757   ctggagagagctgcagcacta 777
             |||||||||||||||||||||
Sbjct: 26463 ctggagagagctgcagcacta 26443



to top

>gb|AC136187.2| Homo sapiens 12 BAC RP11-434D23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 29501

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 762   gagagctgcagcactactgtc 782
             |||||||||||||||||||||
Sbjct: 16764 gagagctgcagcactactgtc 16744



to top

>dbj|AP000351.3| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB226F1
          Length = 118999

 Score = 42.1 bits (21), Expect = 3.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 757   ctggagagagctgcagcacta 777
             |||||||||||||||||||||
Sbjct: 74664 ctggagagagctgcagcacta 74684


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 147,202,846
Number of extensions: 7574252
Number of successful extensions: 144767
Number of sequences better than 10.0: 59
Number of HSP's gapped: 144760
Number of HSP's successfully gapped: 86
Length of query: 941
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 918
Effective length of database: 18,503,978,556
Effective search space: 16986652314408
Effective search space used: 16986652314408
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top