ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf67i18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK111784:Os06g0106100 274 7e-74
2AK112060:Os06g0106100 168 5e-42
3AK105678:Os10g0515200 31 1.7
4AK121920:Os06g0142900 30 3.8
5AK111204:Os01g0689000 29 6.6
6AK121549:Os12g0124100 28 8.6

>AK111784:Os06g0106100 |
          Length = 230
 Score =  274 bits (701), Expect = 7e-74
 Identities = 148/230 (64%), Positives = 158/230 (68%), Gaps = 2/230 (0%)
 Frame = +2

Query: 74  MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253
           MTTAARPTWAPAKGGNEQGGTRIFGPS KYSSRDLAAHT+LKPRKEGQ TQEE+QK    
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTTLKPRKEGQHTQEELQKRNLR 60

Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRD-EDKIVPREI-XXXXXXXXXXX 427
                   KH+SSKDKSY +ERDRRKS+SLLLEGS+R+ EDKIVPREI            
Sbjct: 61  DELEERERKHYSSKDKSYAEERDRRKSTSLLLEGSRREAEDKIVPREIDADDSDVEPRSD 120

Query: 428 XXXXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMN 607
                                RIKKERAE+                      GNPLIN+N
Sbjct: 121 DESDEDDDDDDDTEALMAELERIKKERAEENLRKERQQAEEEAKMKEAELMRGNPLININ 180

Query: 608 NSGSFNVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK 757
           N+GSFNVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFL RYMK
Sbjct: 181 NAGSFNVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLQRYMK 230



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>AK112060:Os06g0106100 |
          Length = 148

 Score =  168 bits (426), Expect = 5e-42
 Identities = 85/108 (78%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +2

Query: 74  MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253
           MTTAARPTWAPAKGGNEQGGTRIFGPS KYSSRDLAAHT+LKPRKEGQ TQEE+QK    
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTTLKPRKEGQHTQEELQKRNLR 60

Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRD-EDKIVPREI 394
                   KH+SSKDKSY +ERDRRKS+SLLLEGS+R+ EDKIVPREI
Sbjct: 61  DELEERERKHYSSKDKSYAEERDRRKSTSLLLEGSRREAEDKIVPREI 108



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>AK105678:Os10g0515200 |
          Length = 523

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +3

Query: 609 TLAPSM*REGGMMMLYSRTKLVERLRHRNGSSTTPSEVIST---ASFCI 746
           TL PS  R       + R  LVE+LR  NG +  P  V+ T   A FC+
Sbjct: 142 TLHPSRVRLFAPARAWVRRVLVEKLRDENGDAAAPHAVVETFQYAMFCL 190



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>AK121920:Os06g0142900 |
          Length = 588

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = -2

Query: 1000 RLIWIGGSNRY*QKILTSRQSI---NKHKQWVLFFTLRNKVNISPY-R*HGCYS 851
            +++W  G + Y  KILT R+S+    K ++ +  FT R +    P+   HGC S
Sbjct: 54   KILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSRFESEYDPFGAGHGCNS 107



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>AK111204:Os01g0689000 |
          Length = 245

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
 Frame = +2

Query: 44  KQRSRNPG*RMTTAARPT--WAPAKGGNEQGGTR---IFGPSGKYSSRDLAAHTSLKPRK 208
           ++R R P  R +TAA PT  WA        GG R       + +    D+ A T  +PR+
Sbjct: 151 RERKRRPSARGSTAASPTTAWARRADTTRGGGERPPFAVALAAEEIEEDMYALTGGRPRR 210

Query: 209 EGQQTQEEVQK 241
             ++    VQ+
Sbjct: 211 RPRKRPRVVQR 221



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>AK121549:Os12g0124100 |
          Length = 848

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +3

Query: 858  HPCYLYGDMFTLFLRVKKRTHCLCLLMLCRDVRIFC*YRLLPPIQINRREYLNSFRLA 1031
            H  Y+ GD F L   +KKR H   +++            LL P+ I + EYL+ FR++
Sbjct: 371  HAIYISGDNFALNKPIKKRCHVRSIILESMGAT-----NLLLPL-IPKFEYLSYFRIS 422


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 27,207,023
Number of extensions: 586021
Number of successful extensions: 1494
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1492
Number of HSP's successfully gapped: 7
Length of query: 359
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 257
Effective length of database: 11,315,673
Effective search space: 2908127961
Effective search space used: 2908127961
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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