ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf67i18 |
|---|---|
| Clone Library Name | barley_pub |
>Q6NUB2:CW15A_XENLA Protein CWC15 homolog A - Xenopus laevis (African clawed frog)| Length = 228 Score = 118 bits (296), Expect = 4e-26 Identities = 82/235 (34%), Positives = 112/235 (47%), Gaps = 7/235 (2%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + S +YSSRDL +HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXXX 433 + ++DK+ D R +SS+ SK+ +P Sbjct: 61 RELEER--ERVVARDKNR-DRPTREHTSSV----SKKPRLDQIPAANLDADDPLTDEDGD 113 Query: 434 XXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMN-- 607 +IKKERAE+ GNPL+N+ Sbjct: 114 EDSDEDSDDDTAALLAELEKIKKERAEEKDRKELEQKAEEERIRMENILSGNPLLNLTGP 173 Query: 608 ---NSGSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLHRYMK 757 + SF VKRRWDDDVVFKN A+G E K KRF+NDT+RS+FH+KF+ +Y+K Sbjct: 174 AAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKQKRFVNDTLRSEFHKKFMEKYIK 228
>Q0VFP5:CWC15_XENTR Protein CWC15 homolog - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 227 Score = 118 bits (295), Expect = 5e-26 Identities = 79/235 (33%), Positives = 110/235 (46%), Gaps = 7/235 (2%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + S +YSSRDL +HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGEADLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDR-RKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXX 430 + +++ V E++R R + SK+ +P Sbjct: 61 --------RELEERERVAVREKNRDRPTREHASSVSKKPRLDQIPAANLDADDPLTDEDA 112 Query: 431 XXXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMNN 610 +IKKERAE+ GNPL+N+ Sbjct: 113 DDDSDEDSDDDTAALLAELEKIKKERAEEQARKELEQKAEEERIRMENILSGNPLLNLTG 172 Query: 611 SG----SFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLHRYMK 757 +F VKRRWDDDVVFKN A+G E K KRF+NDT+RS+FH+KF+ +Y+K Sbjct: 173 PAQSVAAFKVKRRWDDDVVFKNCAKGVDEMKKDKRFVNDTLRSEFHKKFMEKYIK 227
>Q6IQU4:CWC15_DANRE Protein CWC15 homolog - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 243 Score = 117 bits (293), Expect = 8e-26 Identities = 79/244 (32%), Positives = 107/244 (43%), Gaps = 16/244 (6%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + S +YSSRDL HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSALSKQYSSRDLPGHTKIKYRQPTQDAPEEVRARDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXXX 433 +D+ E SSS SKR +P Sbjct: 61 RELEERERAAVKGRDRG-AREHTTSSSSSSSSSSSKRPRLDQIPAANLDADDPLTDDEDD 119 Query: 434 XXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINM--- 604 +IK+ERAE+ GNPL+N+ Sbjct: 120 SGSDSDSDDDTAALLAELEKIKRERAEEQERKEREQKAEEERIRMENILSGNPLLNLAGQ 179 Query: 605 -----------NNSGSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLH 745 +F+VKRRWDDDVVFKN A+G E++ KRF+NDT+RS+FH+KF+ Sbjct: 180 QQQQQQQQQQTQTKNTFSVKRRWDDDVVFKNCAKGVDESRKEKRFVNDTLRSEFHKKFME 239 Query: 746 RYMK 757 +Y+K Sbjct: 240 KYVK 243
>O45766:CWC15_CAEEL Protein CWC15 homolog - Caenorhabditis elegans| Length = 230 Score = 116 bits (291), Expect = 1e-25 Identities = 79/238 (33%), Positives = 112/238 (47%), Gaps = 10/238 (4%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTA RPT+ PA+GG +G + S +YSS+D+ +HT +K R+ GQ+T+ +++K Sbjct: 1 MTTAHRPTFHPARGGTARGEGDLSKLSNQYSSKDMPSHTKMKYRQTGQETEADLRKKDLR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPRE--IXXXXXXXXXXX 427 + K+++ + E+ R S+S SKR + E Sbjct: 61 --------RELEDKERNAIREKRARDSASSSSSHSKRQRMDQIAAESAASVDADEAVDEL 112 Query: 428 XXXXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMN 607 +IKKERAE+ GNPL+N Sbjct: 113 NSSDDDDSDEDDTAALMAELEKIKKERAEEKAARDEEIKEKEEKQRMENILAGNPLLNDT 172 Query: 608 NSGS------FNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLHRYMK 757 +GS F VKRRWDDDVVFKN A+G E K FIND IRS+FH+KF+ +Y+K Sbjct: 173 PAGSSTSGGDFTVKRRWDDDVVFKNCAKGVEERKKEVTFINDAIRSEFHKKFMDKYIK 230
>Q6DKE6:CW15B_XENLA Protein CWC15 homolog B - Xenopus laevis (African clawed frog)| Length = 230 Score = 116 bits (290), Expect = 2e-25 Identities = 79/237 (33%), Positives = 110/237 (46%), Gaps = 9/237 (3%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + + S +YSSRDL +HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGESDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRSRDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXXX 433 K++ D R +SS+ SK+ +P Sbjct: 61 RELEERERVAVRDKNR---DRPTREHTSSV----SKKPRLDQIPAANLDADDPLTDEDAD 113 Query: 434 XXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMN-- 607 +IKKERAE+ GNPL+N+ Sbjct: 114 EDSDEDSDDDTAALLAELEKIKKERAEEQVRKELEQKAEEERIRMENILSGNPLLNLTGP 173 Query: 608 ---NSGSFNVKRRWDDDVVFKNQARG----ETKTPKRFINDTIRSDFHRKFLHRYMK 757 + SF VKRRWDDDVVFKN A+G + + KRF+NDT+RS+FH+KF+ +Y+K Sbjct: 174 AAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKRQDKRFVNDTLRSEFHKKFMEKYVK 230
>Q5BJP2:CWC15_RAT Protein CWC15 homolog - Rattus norvegicus (Rat)| Length = 229 Score = 115 bits (289), Expect = 2e-25 Identities = 79/234 (33%), Positives = 108/234 (46%), Gaps = 6/234 (2%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + S +YSSRDL +HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXXX 433 K++ R+ SSS+ SK+ +P Sbjct: 61 RELEERERAAAREKNRDR-PTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDE 115 Query: 434 XXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMNN- 610 +IKKERAE+ GNPL+N+ Sbjct: 116 DFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGP 175 Query: 611 ---SGSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLHRYMK 757 +F VKRRWDDDVVFKN A+G + K KRF+NDT+RS+FH+KF+ +Y+K Sbjct: 176 SQPQANFKVKRRWDDDVVFKNCAKGIDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
>Q5RE65:CWC15_PONPY Protein CWC15 homolog - Pongo pygmaeus (Orangutan)| Length = 229 Score = 115 bits (289), Expect = 2e-25 Identities = 79/234 (33%), Positives = 108/234 (46%), Gaps = 6/234 (2%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + S +YSSRDL +HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXXX 433 K++ R+ SSS+ SK+ +P Sbjct: 61 RELEERERAAAREKNRDR-PTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDE 115 Query: 434 XXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMNN- 610 +IKKERAE+ GNPL+N+ Sbjct: 116 DFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGP 175 Query: 611 ---SGSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLHRYMK 757 +F VKRRWDDDVVFKN A+G + K KRF+NDT+RS+FH+KF+ +Y+K Sbjct: 176 SQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
>Q9JHS9:CWC15_MOUSE Protein CWC15 homolog - Mus musculus (Mouse)| Length = 229 Score = 115 bits (289), Expect = 2e-25 Identities = 79/234 (33%), Positives = 108/234 (46%), Gaps = 6/234 (2%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + S +YSSRDL +HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXXX 433 K++ R+ SSS+ SK+ +P Sbjct: 61 RELEERERAAARDKNRDR-PTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDE 115 Query: 434 XXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMNN- 610 +IKKERAE+ GNPL+N+ Sbjct: 116 DFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGP 175 Query: 611 ---SGSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLHRYMK 757 +F VKRRWDDDVVFKN A+G + K KRF+NDT+RS+FH+KF+ +Y+K Sbjct: 176 SQPQANFKVKRRWDDDVVFKNCAKGIDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
>Q9P013:CWC15_HUMAN Protein CWC15 homolog - Homo sapiens (Human)| Length = 229 Score = 115 bits (289), Expect = 2e-25 Identities = 79/234 (33%), Positives = 108/234 (46%), Gaps = 6/234 (2%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + S +YSSRDL +HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXXX 433 K++ R+ SSS+ SK+ +P Sbjct: 61 RELEERERAAAREKNRDR-PTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDE 115 Query: 434 XXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMNN- 610 +IKKERAE+ GNPL+N+ Sbjct: 116 DFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGP 175 Query: 611 ---SGSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLHRYMK 757 +F VKRRWDDDVVFKN A+G + K KRF+NDT+RS+FH+KF+ +Y+K Sbjct: 176 SQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
>Q2KJD3:CWC15_BOVIN Protein CWC15 homolog - Bos taurus (Bovine)| Length = 231 Score = 112 bits (279), Expect = 3e-24 Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 7/235 (2%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTAARPT+ PA+GG +G + S +YSSRDL +HT +K R+ Q EEV+ Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGSKRDEDKIVPREIXXXXXXXXXXXXX 433 K++ +R R+ ++ K D+I + Sbjct: 61 RELEERERAAAREKNR----DRPTREHTTSSSVSKKPRLDQIPAANLDADDPLTDEEDED 116 Query: 434 XXXXXXXXXXXXXXXXXXX-RIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMNN 610 +IKKERAE+ GNPL+N+ Sbjct: 117 EDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTG 176 Query: 611 ----SGSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRSDFHRKFLHRYMK 757 +F VKRRWDDDVVFKN A+G + K KRF+NDT+RS+FH+KF+ +Y+K Sbjct: 177 PSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 231
>Q5B020:CWC15_EMENI Pre-mRNA-splicing factor cwc15 - Emericella nidulans (Aspergillus| nidulans) Length = 232 Score = 102 bits (254), Expect = 3e-21 Identities = 77/242 (31%), Positives = 106/242 (43%), Gaps = 14/242 (5%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTA RPT+ PA+G + GP+ Y R L A+T LK R+ GQ T+ E + Sbjct: 1 MTTAHRPTFDPARGKEA-----LRGPA--YHQRLLPAYTHLKVRQSGQGTEGEAARRDLR 53 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEGS-------KRDED------KIVPREI 394 HF+ K+ + V E + LEG+ + +ED +I+ Sbjct: 54 AELLQAEAAHFAKKNGAPVPEASAESTPKRQLEGAPANGGDGELEEDPEAKRRRILEETR 113 Query: 395 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXX 574 +IKKER Sbjct: 114 EIDADSEASEEDSSEDESDDEDEAAELMRELEKIKKERLAQKEKEERERAAKEEEQREVD 173 Query: 575 XXXGNPLINMNNSGSFNVKRRWDDDVVFKNQARG-ETKTPKRFINDTIRSDFHRKFLHRY 751 GNPL+N ++ FN+KRRWDDDVVFKNQARG E K K F+ND +RSDFH+KF+ +Y Sbjct: 174 IARGNPLLNPSD---FNIKRRWDDDVVFKNQARGTEDKRGKEFVNDLLRSDFHKKFMSKY 230 Query: 752 MK 757 ++ Sbjct: 231 VR 232
>P78794:CWC15_SCHPO Pre-mRNA-splicing factor cwc15 - Schizosaccharomyces pombe (Fission| yeast) Length = 265 Score = 73.6 bits (179), Expect = 1e-12 Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 1/58 (1%) Frame = +2 Query: 584 GNPLINMNNSGSFNVKRRWDDDVVFKNQARGETKTPK-RFINDTIRSDFHRKFLHRYM 754 GN L+N +SGSF VKRRWD+DVVF+N +G TP+ F+ND +RS+FH+KFL R++ Sbjct: 207 GNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDDTPRPGFVNDMLRSEFHKKFLARFV 264 Score = 53.5 bits (127), Expect = 1e-06 Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTA RP + PA+G +E TRI SSR L AH LK R+E Q T+EEV+K Sbjct: 1 MTTAHRPQFDPARGHSEMAPTRIT------SSRALPAHLKLKYRQESQGTEEEVRKQDLR 54 Query: 254 XXXXXXXXKHFSSKDKSYVDERDRRKSSSLLLEG--SKRDEDK 376 HF++++ E + S L+EG S +DK Sbjct: 55 EALLRAEAAHFATQEHGASSEEVSQNSK--LIEGFTSPSTDDK 95
>Q9V3B6:CWC15_DROME Protein CWC15 homolog - Drosophila melanogaster (Fruit fly)| Length = 259 Score = 68.2 bits (165), Expect = 6e-11 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 13/102 (12%) Frame = +2 Query: 491 RIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGNPLINMNNS-------------GSFNVK 631 +IK+ER ++ GNPL+N G +K Sbjct: 158 KIKQERLQETARRESEKKQEDERIRMENILSGNPLMNYEPGTAASAAGRASGLGGDLKIK 217 Query: 632 RRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK 757 RRWDDDVVFKN AR F+ND +RSDFH+KF+ +Y+K Sbjct: 218 RRWDDDVVFKNCARSAPDKKTHFVNDALRSDFHKKFMDKYIK 259 Score = 58.2 bits (139), Expect = 6e-08 Identities = 29/53 (54%), Positives = 37/53 (69%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEE 232 MTTAARPT+ PA+GG+ +G + S +YSSRDL HT LK R+ GQ T +E Sbjct: 1 MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSDE 53
>Q6C0E6:CWC15_YARLI Pre-mRNA-splicing factor CWC15 - Yarrowia lipolytica (Candida| lipolytica) Length = 215 Score = 67.0 bits (162), Expect = 1e-10 Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 8/236 (3%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQKXXXX 253 MTTA RPT+ PA+G + T+ G +R L +HT LK R T + + Sbjct: 1 MTTAHRPTFDPARG---KSNTQAAGSISH--TRSLPSHTKLKYRYARISTNTDAMRKTLL 55 Query: 254 XXXXXXXX---KHFSSKDKSYVDERDRRKSSS-----LLLEGSKRDEDKIVPREIXXXXX 409 K + + ++ +D K S ++E ++ D+D E Sbjct: 56 ENEGGLKQAATKLVAEQQQAETQVQDSEKELSDEVKAKIIEENRDDDDSGSDDE------ 109 Query: 410 XXXXXXXXXXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXXXXXXXXXXXXXXXXXGN 589 RIK+ERA+ GN Sbjct: 110 ----ESDSDDSDSDSDDEDELLRIELERIKQERAQAKAREEERLALEEAKAREEQVAFGN 165 Query: 590 PLINMNNSGSFNVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK 757 PL+N +KR+W++DVVF+NQ + + + ++ND IRSDFHRKF++RY++ Sbjct: 166 PLMN-----PVAIKRKWNEDVVFRNQTK-QARKEDSYVNDLIRSDFHRKFMNRYVR 215
>Q6BP48:CWC15_DEBHA Pre-mRNA-splicing factor CWC15 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 226 Score = 48.9 bits (115), Expect = 4e-05 Identities = 61/256 (23%), Positives = 84/256 (32%), Gaps = 28/256 (10%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPR----------KEGQQT 223 MTT RPT +G E IF SR L HTSLK R K G+Q Sbjct: 1 MTTNHRPTLESKRGKAELISNTIF------HSRSLPQHTSLKYRGDIRKPKVDTKIGKQA 54 Query: 224 QEEVQKXXXXXXXXXXXX---------------KHFSSKDKSYVDERDRRKSSSLLLEGS 358 EE++K +H S + DERD + Sbjct: 55 VEELKKDLLLNEGKLEDSLKINKSLTDGDHLMDEHISKTIDNQEDERDYNRQ-------- 106 Query: 359 KRDEDKIVPREIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIKKERAEDXXXXXXX 538 + DE I E +IKKER E+ Sbjct: 107 EYDERSIGKEEYSGSEDDSGDDSEDETAQLMEELA---------KIKKERQEEQEKLELQ 157 Query: 539 XXXXXXXXXXXXXXXGNPLINM---NNSGSFNVKRRWDDDVVFKNQARGETKTPKRFIND 709 NPL+ + + +F +K+ W D FK Q + F ND Sbjct: 158 NKLDKTKV-------SNPLVQVVGASTEANFKIKKSWRDSTAFKKQNSQNKNDDETFTND 210 Query: 710 TIRSDFHRKFLHRYMK 757 T+ S+FH+ FL +Y++ Sbjct: 211 TLNSEFHQNFLTKYIR 226
>Q6FVL2:CWC15_CANGA Pre-mRNA-splicing factor CWC15 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 143 Score = 36.2 bits (82), Expect = 0.24 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Frame = +2 Query: 596 INMNNSGSFNVKRRWDDDVVFKNQA---RGETKTPKRFINDTIRSDFHRKFLHRYMK 757 + + + + ++ DD V + A R + P++F NDT+RS H++FL+R++K Sbjct: 87 LEVEDKKDIKLVKKEDDSVSWGKTAFSRRKKVVKPEKFTNDTVRSQKHKEFLNRFVK 143
>Q59PD3:CWC15_CANAL Pre-mRNA-splicing factor CWC15 - Candida albicans (Yeast)| Length = 224 Score = 34.3 bits (77), Expect = 0.91 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = +2 Query: 587 NPLINMNNSGSFNVKRRWDDDVVFKNQARGETKTPKR--FINDTIRSDFHRKFLHRYMK 757 N + + S K+ W F N+++ E+ + + DT+ S H+KF+ +Y++ Sbjct: 166 NNSLTLQTHDSSTKKKSWRSSTTFNNKSKKESTNDRNNNYTTDTLNSQHHQKFMSKYIR 224
>Q750V7:CWC15_ASHGO Pre-mRNA-splicing factor CWC15 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 184 Score = 33.9 bits (76), Expect = 1.2 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = +2 Query: 74 MTTAARPTWAPAKGGNEQGGTRIFGPSGKYSSRDLAAHTSLKPRKEGQQTQEEVQK 241 MTT+ RP A+ G + G + P+G +R L H ++K R+EG T E+ ++ Sbjct: 1 MTTSHRPQ-LEARSGTKSGVAGEYVPTGVKHARLLPGHRTVKRRREGGATAEDEER 55 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 164,642,020 Number of extensions: 3436692 Number of successful extensions: 7533 Number of sequences better than 10.0: 18 Number of HSP's gapped: 7515 Number of HSP's successfully gapped: 30 Length of query: 359 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 245 Effective length of database: 69,416,809 Effective search space: 17007118205 Effective search space used: 17007118205 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
