ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64o05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070403:Os03g0110900 | 410 | e-115 | 2 | AK106125:Os07g0609000 | 36 | 0.062 | 3 | AK104937:Os07g0609000 | 36 | 0.062 | 4 | AK104406:Os07g0609000 | 36 | 0.062 | 5 | AK104294:Os07g0609000 | 36 | 0.062 | 6 | AK067330:Os07g0609000 | 36 | 0.062 | 7 | AK111228: | 35 | 0.14 | 8 | AY184809:Os07g0608900 | 35 | 0.14 | 9 | AK111350:Os05g0579300 | 30 | 3.4 | 10 | AK121066:Os11g0137300 | 29 | 5.8 | 11 | AK110114: | 29 | 7.5 |
|---|
>AK070403:Os03g0110900 | Length = 289 Score = 410 bits (1055), Expect = e-115 Identities = 213/290 (73%), Positives = 236/290 (81%), Gaps = 1/290 (0%) Frame = +1 Query: 28 MLIPFLAQTSH-TTRPVANCSRLHRRHPARNFGRYCRWWGARSKAIHSPRSVFGPTNGAS 204 ML+P AQ H T RPVA+ LHRR ++ R+ R G + + RSV G +NGA Sbjct: 1 MLMPASAQIPHHTIRPVASYLVLHRRRRHKSDRRF-RLQGPTRRVVFCTRSVLGSSNGAP 59 Query: 205 PSDIVKKRKIVEHIILLRAKPNISDAEEKDMLDYLYTSQYQMRGILTVSLGRIEDPNSEN 384 +VKKRKIVEHIILLRAKPNISDAEEKDMLDYLYTSQYQMRGIL VSLGRIEDPN+EN Sbjct: 60 SGGLVKKRKIVEHIILLRAKPNISDAEEKDMLDYLYTSQYQMRGILAVSLGRIEDPNTEN 119 Query: 385 FTHAVFIRFQQKEDIAKFQSSSYYSKVLDEHVKPVSYGLVSVDFESEVEDDIIPLFRRGE 564 FTHAV +RFQQK+DIAKF SS YY K+LDEHVKPVSYG VSVDFESEVEDDIIPLFRRGE Sbjct: 120 FTHAVLMRFQQKDDIAKFHSSPYYYKILDEHVKPVSYGSVSVDFESEVEDDIIPLFRRGE 179 Query: 565 DFNYGVEFMMLISFLETASRESVEDALAHLQKLIIHYSSFIVQATSGCCLDHMDSLYSHA 744 DFNYGVEFM+LISFLE+AS +SVEDALA LQ+ I SSFIVQAT GCCL+HMDS YSHA Sbjct: 180 DFNYGVEFMLLISFLESASGDSVEDALASLQRFISQCSSFIVQATLGCCLNHMDSGYSHA 239 Query: 745 AVIRFPSIDDFKLFKESTEYKNMCVSKLQPVTERCLELHFVVDPVGNQLM 894 AVIRFPS DDFK+F+E EYK+M S QP+ E+ LELHF VDPVGNQLM Sbjct: 240 AVIRFPSFDDFKIFREGMEYKDMWASTFQPIVEKSLELHFTVDPVGNQLM 289
>AK106125:Os07g0609000 | Length = 261 Score = 35.8 bits (81), Expect = 0.062 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Frame = +1 Query: 235 VEHIILLRAKPNI-SDAEEKDMLDYLYTSQYQMRGILTVSLG---RIEDPNSENF--THA 396 VEHI+L++ +P S M+ L + G+ + +G R+ P +E TH Sbjct: 40 VEHIVLIKVRPEAASSGAAAAMVSSLQALSTAVPGLSYIHVGPVLRLRSPAAEALGPTHV 99 Query: 397 VFIRFQQKEDIAKFQSSSYYSKVLDEHVKPVSYGLVSVDF 516 + R+ K D+A + + + + HV P + ++D+ Sbjct: 100 LHSRYATKPDLAAYAAHPAHVAAVQGHVLPNALDSTAIDW 139
>AK104937:Os07g0609000 | Length = 261 Score = 35.8 bits (81), Expect = 0.062 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Frame = +1 Query: 235 VEHIILLRAKPNI-SDAEEKDMLDYLYTSQYQMRGILTVSLG---RIEDPNSENF--THA 396 VEHI+L++ +P S M+ L + G+ + +G R+ P +E TH Sbjct: 40 VEHIVLIKVRPEAASSGAAAAMVSSLQALSTAVPGLSYIHVGPVLRLRSPAAEALGPTHV 99 Query: 397 VFIRFQQKEDIAKFQSSSYYSKVLDEHVKPVSYGLVSVDF 516 + R+ K D+A + + + + HV P + ++D+ Sbjct: 100 LHSRYATKPDLAAYAAHPAHVAAVQGHVLPNALDSTAIDW 139
>AK104406:Os07g0609000 | Length = 241 Score = 35.8 bits (81), Expect = 0.062 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Frame = +1 Query: 235 VEHIILLRAKPNI-SDAEEKDMLDYLYTSQYQMRGILTVSLG---RIEDPNSENF--THA 396 VEHI+L++ +P S M+ L + G+ + +G R+ P +E TH Sbjct: 20 VEHIVLIKVRPEAASSGAAAAMVSSLQALSTAVPGLSYIHVGPVLRLRSPAAEALGPTHV 79 Query: 397 VFIRFQQKEDIAKFQSSSYYSKVLDEHVKPVSYGLVSVDF 516 + R+ K D+A + + + + HV P + ++D+ Sbjct: 80 LHSRYATKPDLAAYAAHPAHVAAVQGHVLPNALDSTAIDW 119
>AK104294:Os07g0609000 | Length = 261 Score = 35.8 bits (81), Expect = 0.062 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Frame = +1 Query: 235 VEHIILLRAKPNI-SDAEEKDMLDYLYTSQYQMRGILTVSLG---RIEDPNSENF--THA 396 VEHI+L++ +P S M+ L + G+ + +G R+ P +E TH Sbjct: 40 VEHIVLIKVRPEAASSGAAAAMVSSLQALSTAVPGLSYIHVGPVLRLRSPAAEALGPTHV 99 Query: 397 VFIRFQQKEDIAKFQSSSYYSKVLDEHVKPVSYGLVSVDF 516 + R+ K D+A + + + + HV P + ++D+ Sbjct: 100 LHSRYATKPDLAAYAAHPAHVAAVQGHVLPNALDSTAIDW 139
>AK067330:Os07g0609000 | Length = 261 Score = 35.8 bits (81), Expect = 0.062 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Frame = +1 Query: 235 VEHIILLRAKPNI-SDAEEKDMLDYLYTSQYQMRGILTVSLG---RIEDPNSENF--THA 396 VEHI+L++ +P S M+ L + G+ + +G R+ P +E TH Sbjct: 40 VEHIVLIKVRPEAASSGAAAAMVSSLQALSTAVPGLSYIHVGPVLRLRSPAAEALGPTHV 99 Query: 397 VFIRFQQKEDIAKFQSSSYYSKVLDEHVKPVSYGLVSVDF 516 + R+ K D+A + + + + HV P + ++D+ Sbjct: 100 LHSRYATKPDLAAYAAHPAHVAAVQGHVLPNALDSTAIDW 139
>AK111228: | Length = 764 Score = 34.7 bits (78), Expect = 0.14 Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Frame = +1 Query: 121 GRYCRWWGARSKAIHSPRSVFGPTNGASPSDIVKKRKIVEHIILLRAKPNISDAEEKDML 300 GR R +RS+ HSP GASPS IV + + +EH LR+ + S+ + D+ Sbjct: 33 GRRDRRSRSRSRRRHSP--------GASPSRIVIRPRAIEHQSSLRSLLSSSEIDSADVD 84 Query: 301 DYLYTSQYQMRGILTVSLGRIEDPNSENFTH--AVFIRFQQKEDIAKFQ 441 + L + V LG+I E T A +R +Q + A+ Q Sbjct: 85 EELVRQVLEELVAEGVDLGQIGPSQEEEITERIAEVVRRRQSDRHAERQ 133
>AY184809:Os07g0608900 | Length = 270 Score = 34.7 bits (78), Expect = 0.14 Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Frame = +1 Query: 235 VEHIILLRAKPNIS-DAEEKDMLDYLYTSQYQMRGILTVSLG---RIEDPNSENF--THA 396 VEHI+L++ +P + M+ L + G+ + +G R+ P +E TH Sbjct: 49 VEHIVLIKVRPEAAASGAAAAMVSSLQALSSVVPGLSYIHVGPVLRLRSPAAEALGPTHV 108 Query: 397 VFIRFQQKEDIAKFQSSSYYSKVLDEHVKPVSYGLVSVDF 516 + R+ K D+A + + + + HV P + ++D+ Sbjct: 109 LHSRYATKPDLAAYAAHPAHVAAVQGHVLPNALDTTAIDW 148
>AK111350:Os05g0579300 | Length = 255 Score = 30.0 bits (66), Expect = 3.4 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = -2 Query: 940 GSISGSGSEHKGPGSTSAGCRQGRRR 863 G+ + S SE +GP S+SA QGRR+ Sbjct: 148 GTTTESSSEERGPPSSSAAAAQGRRK 173
>AK121066:Os11g0137300 | Length = 1110 Score = 29.3 bits (64), Expect = 5.8 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = +1 Query: 628 SVEDALAHLQKLIIHYSSFIVQATSGCCLDHMDSLYSHAAVIRFPSIDDFKLFKESTE-- 801 S+ A A ++KL++ L H++ H I P +D ++++ EST Sbjct: 50 SLASATASVRKLVMEI------------LSHINKRVKHRPEISLPMLDLWRIYTESTSST 97 Query: 802 -YKNMCVSKLQPVTERCL 852 +N C+ ++ ER L Sbjct: 98 IVRNFCIVYIEMAFERLL 115
>AK110114: | Length = 348 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%) Frame = +1 Query: 445 SSYYSKVLDEHVKPVS----YGLVSVDFESEVEDDIIPLFRRGEDFNYGVEFMMLISFLE 612 S+Y S VLDE +P S + + ++ +VE + + DFN ++ ++L+S+L Sbjct: 233 SNYVSNVLDEEAEPSSALGQFLMNTLALAPKVEPEQVE-----RDFNNHIQDVLLVSYLS 287 Query: 613 TASRESVE 636 R ++ Sbjct: 288 NTIRTQID 295 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 36,369,582 Number of extensions: 858878 Number of successful extensions: 2284 Number of sequences better than 10.0: 11 Number of HSP's gapped: 2272 Number of HSP's successfully gapped: 11 Length of query: 399 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 296 Effective length of database: 11,275,632 Effective search space: 3337587072 Effective search space used: 3337587072 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
