ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62h04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os01g0303300:Os01g0303300 | 238 | 3e-63 | 2 | AK063714:Os03g0305600 | 159 | 2e-39 | 3 | AK101693:Os05g0111200 | 70 | 1e-12 | 4 | Os09g0385800:Os09g0385800 | 37 | 0.013 | 5 | AK066896:Os03g0270200 | 33 | 0.24 | 6 | AK060809:Os03g0270200 | 33 | 0.24 | 7 | AK103851:Os03g0114900 | 31 | 0.91 | 8 | Os10g0442800:Os10g0442800 | 29 | 4.5 | 9 | AK111322:Os11g0241200 | 29 | 4.5 | 10 | AK107002:Os02g0315600 | 29 | 4.5 | 11 | AK106848:Os02g0315600 | 29 | 4.5 | 12 | AK103897:Os05g0120100 | 29 | 4.5 | 13 | AK102703:Os02g0315600 | 29 | 4.5 | 14 | AK101260:Os03g0723700 | 29 | 4.5 | 15 | AK069746:Os05g0490400 | 29 | 4.5 | 16 | AK060437:Os05g0120100 | 29 | 4.5 | 17 | AK105943:Os01g0850000 | 28 | 5.9 | 18 | AK073289:Os01g0584300 | 28 | 7.7 | 19 | AK071635:Os01g0155600 | 28 | 7.7 | 20 | AK060171:Os01g0155600 | 28 | 7.7 |
|---|
>Os01g0303300:Os01g0303300 | Length = 263 Score = 238 bits (608), Expect = 3e-63 Identities = 123/171 (71%), Positives = 137/171 (80%) Frame = +1 Query: 100 SRLDARTLKDEVASMDRRPLLDLGHPLLNRVADSFIXXXXXXXXXXXSREAYFVTVEGMG 279 SRLD TLK+EVASMD+R L+DLGHPL+NRVADSFI SREAYFVTVEG+G Sbjct: 95 SRLDTWTLKEEVASMDKRWLVDLGHPLVNRVADSFIRAAGVGAARAVSREAYFVTVEGLG 154 Query: 280 GDSTGLDTSAKRSNFSSARGDDGQKSLDAVVKSAGKEAIQWGLAAGVYSGITYGLREARG 459 GD+ GLD + KRSNFS RGDDGQKSLDAVVKSAGKEA QWGLAAGVYSG+TYGLREARG Sbjct: 155 GDTAGLDNAVKRSNFS--RGDDGQKSLDAVVKSAGKEAFQWGLAAGVYSGLTYGLREARG 212 Query: 460 HHDWKNSXXXXXXXXXXXXLTGDNGHSDHVVHFAITGAALSSAATMLSGIF 612 HDWKNS LTGD G++DH+VHFAITGAALSSAA++LSGI+ Sbjct: 213 CHDWKNSAVAGAIAGVAVALTGDTGNADHMVHFAITGAALSSAASLLSGIY 263
>AK063714:Os03g0305600 | Length = 179 Score = 159 bits (402), Expect = 2e-39 Identities = 82/176 (46%), Positives = 110/176 (62%), Gaps = 2/176 (1%) Frame = +1 Query: 88 GEMGSRLDARTLKDEVASMDRRPLLDLGHPLLNRVADSFIXXXXXXXXXXXSREAYFVTV 267 G S L+ RT DEV +++ ++DLGHPLLNRVA+SF+ +RE+YF+ + Sbjct: 3 GSSNSSLETRTFLDEVRGLEKNWMVDLGHPLLNRVAESFVKAAGIGAVQAVARESYFMAM 62 Query: 268 EGMGGDSTGLD--TSAKRSNFSSARGDDGQKSLDAVVKSAGKEAIQWGLAAGVYSGITYG 441 EG GG + + T A++ +F G + KS +A+VKS KE++QWGLAAG++SG+TYG Sbjct: 63 EGEGGGTGAVSDSTGARKRSFPDLNGGNSSKSAEAMVKSVSKESLQWGLAAGLHSGLTYG 122 Query: 442 LREARGHHDWKNSXXXXXXXXXXXXLTGDNGHSDHVVHFAITGAALSSAATMLSGI 609 L EARG HDWKNS LT D + VV AI GAALS+AA +LSGI Sbjct: 123 LTEARGTHDWKNSVVAGALTGAAVALTSDRASHERVVQCAIAGAALSTAANVLSGI 178
>AK101693:Os05g0111200 | Length = 146 Score = 70.5 bits (171), Expect = 1e-12 Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 1/149 (0%) Frame = +1 Query: 160 LDLGHPLLNRVADSFIXXXXXXXXXXXSREAYFVTVEGMGGDSTGLDTSAKRSNFSSA-R 336 +D+G+P LNR D F+ + G A F R Sbjct: 19 IDMGNPFLNRTVDGFLKIG-----------------------AVGACKVAAEDTFDCLHR 55 Query: 337 GDDGQKSLDAVVKSAGKEAIQWGLAAGVYSGITYGLREARGHHDWKNSXXXXXXXXXXXX 516 GD + L+ ++K KE WG AGVY G+ YG+ RG HDWKN+ Sbjct: 56 GDVSKHKLEHMLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRHDWKNAMIGGALSGALIS 115 Query: 517 LTGDNGHSDHVVHFAITGAALSSAATMLS 603 N H D ++ AITG A+++A ++ Sbjct: 116 -AASNNHKDKIIKDAITGGAVATAVEFIN 143
>Os09g0385800:Os09g0385800 | Length = 279 Score = 37.4 bits (85), Expect = 0.013 Identities = 23/64 (35%), Positives = 28/64 (43%) Frame = +2 Query: 287 RRGWTPAPRGATSRAPEGMTARSRSMQWLNRQARRPSSGDWQPGCTPG*RTA*ERPEGTM 466 RR WT AP +P G + R W R+ RR G GC+PG +GT Sbjct: 229 RRRWTRAPG-----SPGGGSTPRRGAPWPQRRRRRRGGGSGMVGCSPG--------QGTS 275 Query: 467 TGRT 478 TG T Sbjct: 276 TGAT 279
>AK066896:Os03g0270200 | Length = 840 Score = 33.1 bits (74), Expect = 0.24 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 6/98 (6%) Frame = +2 Query: 227 RRGRCRGRHTSSPSKGWEEIRRG-----WTPAPRGATSRAPEGMTARSRSMQWLNRQARR 391 RR R + SP++ RR W+P+P R+P R RS R+ R Sbjct: 307 RRSPGRAPRSPSPARHRSPRRRSSLDRHWSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRS 366 Query: 392 PSSGDWQP-GCTPG*RTA*ERPEGTMTGRTAR*QGRSP 502 PS G +P +PG R RP GR R + RSP Sbjct: 367 PSPGRRRPRSPSPGRR----RPRSPSPGR-RRPRSRSP 399 Score = 30.0 bits (66), Expect = 2.0 Identities = 27/85 (31%), Positives = 35/85 (41%) Frame = +2 Query: 248 RHTSSPSKGWEEIRRGWTPAPRGATSRAPEGMTARSRSMQWLNRQARRPSSGDWQPGCTP 427 R SPS G RR +P+P R+P R RS R+ R PS G +P Sbjct: 342 RRPRSPSPGR---RRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSRS 398 Query: 428 G*RTA*ERPEGTMTGRTAR*QGRSP 502 R P G+ R+ + RSP Sbjct: 399 PGRRRSPSPRGSPRLRSPKRPRRSP 423
>AK060809:Os03g0270200 | Length = 580 Score = 33.1 bits (74), Expect = 0.24 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 6/98 (6%) Frame = +2 Query: 227 RRGRCRGRHTSSPSKGWEEIRRG-----WTPAPRGATSRAPEGMTARSRSMQWLNRQARR 391 RR R + SP++ RR W+P+P R+P R RS R+ R Sbjct: 47 RRSPGRAPRSPSPARHRSPRRRSSLDRHWSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRS 106 Query: 392 PSSGDWQP-GCTPG*RTA*ERPEGTMTGRTAR*QGRSP 502 PS G +P +PG R RP GR R + RSP Sbjct: 107 PSPGRRRPRSPSPGRR----RPRSPSPGR-RRPRSRSP 139 Score = 30.0 bits (66), Expect = 2.0 Identities = 27/85 (31%), Positives = 35/85 (41%) Frame = +2 Query: 248 RHTSSPSKGWEEIRRGWTPAPRGATSRAPEGMTARSRSMQWLNRQARRPSSGDWQPGCTP 427 R SPS G RR +P+P R+P R RS R+ R PS G +P Sbjct: 82 RRPRSPSPGR---RRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSRS 138 Query: 428 G*RTA*ERPEGTMTGRTAR*QGRSP 502 R P G+ R+ + RSP Sbjct: 139 PGRRRSPSPRGSPRLRSPKRPRRSP 163
>AK103851:Os03g0114900 | Length = 194 Score = 31.2 bits (69), Expect = 0.91 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 4/80 (5%) Frame = +1 Query: 253 YFVTVEGMGGDSTGLDTSAKRSNFSSARGDDGQKSLDAVVKSAGKEAIQWGLAAGV---- 420 Y+ + + G G + + ++ GD + + V+ S G + G GV Sbjct: 67 YYTGIGYLSGAVAGAAVGLRDAARNAEPGDTAKIRANRVLNSCGSNGRRMGNTLGVIGLL 126 Query: 421 YSGITYGLREARGHHDWKNS 480 Y+GI G+ R DW NS Sbjct: 127 YAGIESGMVAVRDRDDWINS 146
>Os10g0442800:Os10g0442800 | Length = 445 Score = 28.9 bits (63), Expect = 4.5 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 272 GWE-EIRRGWTPAPRGATSRAPEGMTARSRSMQWLNRQARRPSS 400 GWE + RRG + A A + ++ARS S +R ARR S Sbjct: 12 GWERDERRGRSSAVASAAAATTRSLSARSNSSTSTDRDARRSGS 55
>AK111322:Os11g0241200 | Length = 164 Score = 28.9 bits (63), Expect = 4.5 Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Frame = +2 Query: 224 GRRGRCRGRHTSSPSKGWEEIRRGWTPA-PRGATSRAPEG-MTARSRSMQWLNRQARRPS 397 GRRGRCR T +PS+ P+ PR +R G R R + L R+ RR Sbjct: 68 GRRGRCRATRT-APSRSPPPATGSSLPSPPRPRAARTGAGTRRRRPRGTRSLRRRCRR-R 125 Query: 398 SGDWQPGCTPG*RTA*ERPEGTMTGRTAR*QGRSP 502 G + G RT P G G R+P Sbjct: 126 RGAPRRSRRGGARTTPRPPGGCRAGSRTAPPSRTP 160
>AK107002:Os02g0315600 | Length = 254 Score = 28.9 bits (63), Expect = 4.5 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -3 Query: 570 SGDGEMDDVVGVPVVPCQRDGCSGDRPC 487 S DG+ DDVV P RDG S D C Sbjct: 162 SEDGDEDDVVSTGRTPGYRDGSSPDSTC 189
>AK106848:Os02g0315600 | Length = 254 Score = 28.9 bits (63), Expect = 4.5 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -3 Query: 570 SGDGEMDDVVGVPVVPCQRDGCSGDRPC 487 S DG+ DDVV P RDG S D C Sbjct: 162 SEDGDEDDVVSTGRTPGYRDGSSPDSTC 189
>AK103897:Os05g0120100 | Length = 323 Score = 28.9 bits (63), Expect = 4.5 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = -3 Query: 726 DGAERAKCRRYMEKSRGTL--HISRAAPNFFSPSPTLHGLEYA*EHGRRARQCGSGDG 559 +G++ R E SR + S AA N SPSP +G ++G R+ + G+GDG Sbjct: 249 NGSDHGDSPRGRENSRSPSDGYRSPAAANGRSPSPRNNGSPSPMDNGSRSPRDGNGDG 306
>AK102703:Os02g0315600 | Length = 254 Score = 28.9 bits (63), Expect = 4.5 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -3 Query: 570 SGDGEMDDVVGVPVVPCQRDGCSGDRPC 487 S DG+ DDVV P RDG S D C Sbjct: 162 SEDGDEDDVVSTGRTPGYRDGSSPDSTC 189
>AK101260:Os03g0723700 | Length = 265 Score = 28.9 bits (63), Expect = 4.5 Identities = 19/55 (34%), Positives = 22/55 (40%) Frame = +2 Query: 224 GRRGRCRGRHTSSPSKGWEEIRRGWTPAPRGATSRAPEGMTARSRSMQWLNRQAR 388 G RGR RGR +G EE APR A G+ R WL+ R Sbjct: 166 GGRGRRRGRRRQQGQEGQEE--EALVVAPRSRPPVAGAGLLLARRCTPWLSPSRR 218
>AK069746:Os05g0490400 | Length = 513 Score = 28.9 bits (63), Expect = 4.5 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -1 Query: 758 SDLLSCRDG*QMGQSAQSVEGTWRN 684 SD+LSC D + SA SV TWRN Sbjct: 362 SDILSCSDETEFPGSAPSVLHTWRN 386
>AK060437:Os05g0120100 | Length = 311 Score = 28.9 bits (63), Expect = 4.5 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = -3 Query: 726 DGAERAKCRRYMEKSRGTL--HISRAAPNFFSPSPTLHGLEYA*EHGRRARQCGSGDG 559 +G++ R E SR + S AA N SPSP +G ++G R+ + G+GDG Sbjct: 237 NGSDHGDSPRGRENSRSPSDGYRSPAAANGRSPSPRNNGSPSPMDNGSRSPRDGNGDG 294
>AK105943:Os01g0850000 | Length = 363 Score = 28.5 bits (62), Expect = 5.9 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = +2 Query: 266 SKGWEEIRRGWTPAPRGATSRA-----PEGMTARSRSMQWLNRQARRPSSGDWQPGCT 424 S GW +++ A A RA P G T R+ + ++ RQA P+ +P C+ Sbjct: 228 SSGWPPLQKAHQQASSAAGMRAVFLSPPGGKTERTGTGVFIPRQAGAPAEPKKKPSCS 285
>AK073289:Os01g0584300 | Length = 78 Score = 28.1 bits (61), Expect = 7.7 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 254 TSSPSKGWEEIRRGWT-PAPRGATSRAPEGMTARSRSMQWLNRQ 382 TSSPS+ + W PA RG +A + + R +M W+ RQ Sbjct: 35 TSSPSRRTSVVMASWIWPATRGK-KKAGDDVVDRPSTMWWIGRQ 77
>AK071635:Os01g0155600 | Length = 324 Score = 28.1 bits (61), Expect = 7.7 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 11/69 (15%) Frame = +2 Query: 221 SGRRGRCRGRHTS-----------SPSKGWEEIRRGWTPAPRGATSRAPEGMTARSRSMQ 367 S RRGR RGR S SP + RR +P SR+P G SRS + Sbjct: 164 SPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRD----SRSPRGSPRDSRSPR 219 Query: 368 WLNRQARRP 394 R +R P Sbjct: 220 GSPRDSRSP 228
>AK060171:Os01g0155600 | Length = 324 Score = 28.1 bits (61), Expect = 7.7 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 11/69 (15%) Frame = +2 Query: 221 SGRRGRCRGRHTS-----------SPSKGWEEIRRGWTPAPRGATSRAPEGMTARSRSMQ 367 S RRGR RGR S SP + RR +P SR+P G SRS + Sbjct: 164 SPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRD----SRSPRGSPRDSRSPR 219 Query: 368 WLNRQARRP 394 R +R P Sbjct: 220 GSPRDSRSP 228 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,263,623 Number of extensions: 488293 Number of successful extensions: 1985 Number of sequences better than 10.0: 20 Number of HSP's gapped: 1979 Number of HSP's successfully gapped: 22 Length of query: 275 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 176 Effective length of database: 11,435,796 Effective search space: 2012700096 Effective search space used: 2012700096 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
