ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64n02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | D38011:Os01g0823300 | 142 | 3e-34 | 2 | AK121584:Os05g0477300 | 142 | 3e-34 | 3 | AK119797:Os05g0477300 | 142 | 3e-34 | 4 | AK119693:Os05g0477300 | 142 | 3e-34 | 5 | AK119683:Os05g0477300 | 142 | 3e-34 | 6 | AK098982:Os05g0477300 | 142 | 3e-34 | 7 | AK061933:Os05g0477300 | 142 | 3e-34 | 8 | AK108295: | 102 | 4e-22 | 9 | AK062822: | 79 | 4e-15 | 10 | AK109021:Os03g0816200 | 35 | 0.073 | 11 | Os05g0373500:Os05g0373500 | 28 | 6.9 | 12 | AK101322:Os02g0139300 | 28 | 8.9 | 13 | AK072088:Os02g0139300 | 28 | 8.9 |
|---|
>D38011:Os01g0823300 | Length = 133 Score = 142 bits (358), Expect = 3e-34 Identities = 67/83 (80%), Positives = 68/83 (81%) Frame = +3 Query: 102 MTFXXXXXXXXXXXXXXVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHD 281 MTF VKYIRCSNCAKCCPKDKAIKRF VRNIVEQAA+RDVQEACVHD Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60 Query: 282 GYVLPKLYAKVHHCVSCAIHAHI 350 GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHI 83
>AK121584:Os05g0477300 | Length = 136 Score = 142 bits (358), Expect = 3e-34 Identities = 67/83 (80%), Positives = 68/83 (81%) Frame = +3 Query: 102 MTFXXXXXXXXXXXXXXVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHD 281 MTF VKYIRCSNCAKCCPKDKAIKRF VRNIVEQAA+RDVQEACVHD Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60 Query: 282 GYVLPKLYAKVHHCVSCAIHAHI 350 GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHI 83
>AK119797:Os05g0477300 | Length = 136 Score = 142 bits (358), Expect = 3e-34 Identities = 67/83 (80%), Positives = 68/83 (81%) Frame = +3 Query: 102 MTFXXXXXXXXXXXXXXVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHD 281 MTF VKYIRCSNCAKCCPKDKAIKRF VRNIVEQAA+RDVQEACVHD Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60 Query: 282 GYVLPKLYAKVHHCVSCAIHAHI 350 GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHI 83
>AK119693:Os05g0477300 | Length = 136 Score = 142 bits (358), Expect = 3e-34 Identities = 67/83 (80%), Positives = 68/83 (81%) Frame = +3 Query: 102 MTFXXXXXXXXXXXXXXVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHD 281 MTF VKYIRCSNCAKCCPKDKAIKRF VRNIVEQAA+RDVQEACVHD Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60 Query: 282 GYVLPKLYAKVHHCVSCAIHAHI 350 GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHI 83
>AK119683:Os05g0477300 | Length = 136 Score = 142 bits (358), Expect = 3e-34 Identities = 67/83 (80%), Positives = 68/83 (81%) Frame = +3 Query: 102 MTFXXXXXXXXXXXXXXVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHD 281 MTF VKYIRCSNCAKCCPKDKAIKRF VRNIVEQAA+RDVQEACVHD Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60 Query: 282 GYVLPKLYAKVHHCVSCAIHAHI 350 GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHI 83
>AK098982:Os05g0477300 | Length = 136 Score = 142 bits (358), Expect = 3e-34 Identities = 67/83 (80%), Positives = 68/83 (81%) Frame = +3 Query: 102 MTFXXXXXXXXXXXXXXVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHD 281 MTF VKYIRCSNCAKCCPKDKAIKRF VRNIVEQAA+RDVQEACVHD Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60 Query: 282 GYVLPKLYAKVHHCVSCAIHAHI 350 GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHI 83
>AK061933:Os05g0477300 | Length = 136 Score = 142 bits (358), Expect = 3e-34 Identities = 67/83 (80%), Positives = 68/83 (81%) Frame = +3 Query: 102 MTFXXXXXXXXXXXXXXVKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHD 281 MTF VKYIRCSNCAKCCPKDKAIKRF VRNIVEQAA+RDVQEACVHD Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60 Query: 282 GYVLPKLYAKVHHCVSCAIHAHI 350 GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHI 83
>AK108295: | Length = 122 Score = 102 bits (254), Expect = 4e-22 Identities = 47/66 (71%), Positives = 54/66 (81%) Frame = +3 Query: 153 VKYIRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVHDGYVLPKLYAKVHHCVSC 332 V ++RCSNCA+ PKDKAIKRF VRNIVE AA+RD+ EA V+ Y LPKLY KV +CVSC Sbjct: 18 VTFVRCSNCARAVPKDKAIKRFTVRNIVEAAAIRDLSEASVYQEYALPKLYIKVVYCVSC 77 Query: 333 AIHAHI 350 AIHAHI Sbjct: 78 AIHAHI 83
>AK062822: | Length = 110 Score = 79.0 bits (193), Expect = 4e-15 Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 2/65 (3%) Frame = +3 Query: 162 IRCSNCAKCCPKDKAIKRFLVRNIVEQAAVRDVQEA--CVHDGYVLPKLYAKVHHCVSCA 335 + C NC + CPKDKA+KRF+VRN+++QA+ RDV E+ G+ LPKLY K +C++CA Sbjct: 21 MHCFNCGRLCPKDKAVKRFVVRNMLDQASARDVAESSPIYSQGFPLPKLYMKQRYCIACA 80 Query: 336 IHAHI 350 IH+ + Sbjct: 81 IHSRV 85
>AK109021:Os03g0816200 | Length = 61 Score = 35.0 bits (79), Expect = 0.073 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = +3 Query: 198 DKAIKRFLVRNIVEQAAV 251 DKAI RFLVRNIVEQAAV Sbjct: 35 DKAINRFLVRNIVEQAAV 52
>Os05g0373500:Os05g0373500 | Length = 512 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = -1 Query: 333 HKKHSGAPWHTAWGEHIHHAHKPPAHLSQQPAP 235 H H H H HH+H+ HL PAP Sbjct: 349 HHNHHQHHHHHHHHHHHHHSHEEKRHLCPSPAP 381
>AK101322:Os02g0139300 | Length = 489 Score = 28.1 bits (61), Expect = 8.9 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Frame = -3 Query: 328 ETQWCTLAYSLGRTYP--------SCTQASCTSLTAACSTMFLTKKRLIALSLGQHLAQL 173 E +WC L S+G T P +C+ A CTSL S L + I+ + + + Sbjct: 366 ERKWCVLKPSIGLTDPRLSDSISYACSLADCTSLGYKTSCGGLDTRSNISYAFNSYYQKN 425 Query: 172 EQ 167 +Q Sbjct: 426 DQ 427
>AK072088:Os02g0139300 | Length = 489 Score = 28.1 bits (61), Expect = 8.9 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Frame = -3 Query: 328 ETQWCTLAYSLGRTYP--------SCTQASCTSLTAACSTMFLTKKRLIALSLGQHLAQL 173 E +WC L S+G T P +C+ A CTSL S L + I+ + + + Sbjct: 366 ERKWCVLKPSIGLTDPRLSDSISYACSLADCTSLGYKTSCGGLDTRSNISYAFNSYYQKN 425 Query: 172 EQ 167 +Q Sbjct: 426 DQ 427 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 19,949,587 Number of extensions: 384589 Number of successful extensions: 1190 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1187 Number of HSP's successfully gapped: 13 Length of query: 305 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 205 Effective length of database: 11,395,755 Effective search space: 2336129775 Effective search space used: 2336129775 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
