ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64n02 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g60790:12001.t05460:unspliced-genomic 40S ribosomal protein S26, putative, expressed| Length = 2208 Score = 67.5 bits (141), Expect(3) = 7e-31 Identities = 30/48 (62%), Positives = 33/48 (68%) Frame = +1 / +3 Query: 271 VCMMDMFSPSCMPRCTTVFLVPSMLTLSVSAPVRTGGTVSPRSVSGAG 414 + + D FSPS PRC TV V SMLT SVSAPVRTGGT R+ S AG Sbjct: 624 ISLQDTFSPSFTPRCITVCPVQSMLTSSVSAPVRTGGTAGLRNASAAG 767 Score = 67.0 bits (140), Expect(3) = 7e-31 Identities = 27/30 (90%), Positives = 29/30 (96%) Frame = +3 / +1 Query: 195 KDKAIKRFLVRNIVEQAAVRDVQEACVHDG 284 +DKAIKRF VRNIVEQAA+RDVQEACVHDG Sbjct: 367 QDKAIKRFQVRNIVEQAAIRDVQEACVHDG 456 Score = 45.1 bits (92), Expect(3) = 7e-31 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = +3 / +2 Query: 153 VKYIRCSNCAKCCPK 197 VKYIRCSNCAKCCPK Sbjct: 224 VKYIRCSNCAKCCPK 268 Score = 79.9 bits (168), Expect(3) = 1e-29 Identities = 35/46 (76%), Positives = 39/46 (84%) Frame = -3 / -1 Query: 415 SLRLKRCGGSRFLLFSRERTRTM*AWMAQETQWCTLAYSLGRTYPS 278 +LR KR GG R L FSRERTRTM*AW+AQ+TQ CTLA SLGRTYP+ Sbjct: 768 TLRRKRSGGLRSLRFSRERTRTM*AWIAQDTQ*CTLA*SLGRTYPA 631 Score = 50.1 bits (103), Expect(3) = 1e-29 Identities = 23/29 (79%), Positives = 23/29 (79%) Frame = -3 / -2 Query: 283 PSCTQASCTSLTAACSTMFLTKKRLIALS 197 PSCT AS TSL AACSTMFLT LIALS Sbjct: 455 PSCTHASWTSLMAACSTMFLT*NLLIALS 369 Score = 45.5 bits (93), Expect(3) = 1e-29 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -3 / -1 Query: 208 IALSLGQHLAQLEQRMYLTW 149 + L+LGQHLAQLEQRMYLTW Sbjct: 279 LRLTLGQHLAQLEQRMYLTW 220 Score = 70.3 bits (147), Expect(3) = 7e-24 Identities = 29/42 (69%), Positives = 34/42 (80%) Frame = -2 / -3 Query: 413 PAPETLRGLTVPPVLTGADTDNVSMDGTRNTVVHLGIQLGEN 288 PA E R VPPVLTGADTD+VSMD T +TV+HLG++LGEN Sbjct: 766 PAAEAFRRPAVPPVLTGADTDDVSMDCTGHTVMHLGVKLGEN 641 Score = 45.5 bits (93), Expect(3) = 7e-24 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -1 / -2 Query: 198 PWGSTWRSWSSGCT* 154 PWGSTWRSWSSGCT* Sbjct: 269 PWGSTWRSWSSGCT* 225 Score = 40.0 bits (81), Expect(3) = 7e-24 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -1 / -3 Query: 282 HHAHKPPAHLSQQPAPQCSSPRNA**PCP 196 H A PP +PAP+CSSP +* PCP Sbjct: 454 HRARTPPGRP*WRPAPRCSSPETS*SPCP 368 Score = 62.9 bits (131), Expect(2) = 6e-14 Identities = 23/23 (100%), Positives = 23/23 (100%) Frame = +3 / +2 Query: 282 GYVLPKLYAKVHHCVSCAIHAHI 350 GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 635 GYVLPKLYAKVHHCVSCAIHAHI 703 Score = 38.6 bits (78), Expect(2) = 6e-14 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +2 / +1 Query: 155 QVHPLLQLRQVLPQGQ 202 QVHPLLQLRQVLPQG+ Sbjct: 226 QVHPLLQLRQVLPQGK 273 Score = 35.4 bits (71), Expect = 0.58 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -1 / -2 Query: 333 HKKHSGAPWHTAWGEHI 283 H+ HS APW AWGE I Sbjct: 686 HRTHSDAPWRKAWGERI 636
>LOC_Os05g39960:12005.t03536:unspliced-genomic 40S ribosomal protein S26, putative, expressed| Length = 2702 Score = 76.2 bits (160), Expect(3) = 2e-29 Identities = 35/49 (71%), Positives = 36/49 (73%) Frame = -3 / -1 Query: 415 SLRLKRCGGSRFLLFSRERTRTM*AWMAQETQWCTLAYSLGRTYPSCTQ 269 +LRL GG R L FSRERTRTM AWMAQETQ TLAYS GRTYP Q Sbjct: 722 TLRLNLSGGLRSLRFSRERTRTMWAWMAQETQ*WTLAYSFGRTYPEQKQ 576 Score = 46.9 bits (96), Expect(3) = 2e-29 Identities = 15/16 (93%), Positives = 15/16 (93%) Frame = -1 / -1 Query: 198 PWGSTWRSWSSGCT*H 151 PWGSTWRSWSSGCT H Sbjct: 287 PWGSTWRSWSSGCTSH 240 Score = 44.6 bits (91), Expect(3) = 2e-29 Identities = 22/36 (61%), Positives = 24/36 (66%) Frame = -3 / -3 Query: 283 PSCTQASCTSLTAACSTMFLTKKRLIALSLGQHLAQ 176 PS T AS TSL AACSTMFLT L+ALS + Q Sbjct: 495 PSWTHASWTSLMAACSTMFLTWNLLMALSCDKATTQ 388 Score = 67.0 bits (140), Expect(3) = 3e-28 Identities = 27/30 (90%), Positives = 29/30 (96%) Frame = +3 / +2 Query: 195 KDKAIKRFLVRNIVEQAAVRDVQEACVHDG 284 +DKAIKRF VRNIVEQAA+RDVQEACVHDG Sbjct: 407 QDKAIKRFQVRNIVEQAAIRDVQEACVHDG 496 Score = 51.0 bits (105), Expect(3) = 3e-28 Identities = 26/53 (49%), Positives = 28/53 (52%) Frame = +1 / +2 Query: 268 LVCMMDMFSPSCMPRCTTVFLVPSMLTLSVSAPVRTGGTVSPRSVSGAGTTAL 426 +V + D S SC PR T PS T SVSAP RT GT R SGAG L Sbjct: 575 VVFVQDTSSRSCTPRSITASPAPSTPTSSVSAPARTAGTAGRRRGSGAGYALL 733 Score = 45.5 bits (93), Expect(3) = 3e-28 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = +3 / +2 Query: 153 VKYIRCSNCAKCCPKDKAIK 212 VKYIRCSNCAKCCPK + + Sbjct: 242 VKYIRCSNCAKCCPKVRGFR 301 Score = 57.0 bits (118), Expect(3) = 1e-19 Identities = 24/42 (57%), Positives = 30/42 (71%) Frame = -2 / -3 Query: 413 PAPETLRGLTVPPVLTGADTDNVSMDGTRNTVVHLGIQLGEN 288 PAPE LR VP VL GADTD+V +DG + V+ LG+QL E+ Sbjct: 720 PAPEPLRRPAVPAVLAGADTDDVGVDGAGDAVMDLGVQLRED 595 Score = 41.4 bits (84), Expect(3) = 1e-19 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = -3 / -3 Query: 199 SLGQHLAQLEQRMYLTW 149 +LGQHLAQLEQRMY TW Sbjct: 288 TLGQHLAQLEQRMYFTW 238 Score = 35.9 bits (72), Expect(3) = 1e-19 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 / -1 Query: 279 HAHKPPAHLSQQPAPQCSSPRNA**PCP 196 H PP H PA +CSSP +* PCP Sbjct: 491 HGRTPPGHP*WPPARRCSSPGTS*WPCP 408 Score = 65.7 bits (137), Expect(2) = 5e-16 Identities = 25/34 (73%), Positives = 26/34 (76%) Frame = +3 / +1 Query: 249 VRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHI 350 V + C GYVLPKLYAKVHHCVSCAIHAHI Sbjct: 556 VEPKRTCCFCSGYVLPKLYAKVHHCVSCAIHAHI 657 Score = 43.2 bits (88), Expect(2) = 5e-16 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = +2 / +1 Query: 152 CQVHPLLQLRQVLPQGQGYQAFL 220 C+VHPLLQLRQVLPQG Q L Sbjct: 241 CEVHPLLQLRQVLPQGSRIQILL 309
>LOC_Os08g35530:12008.t03293:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1189 Score = 36.3 bits (73), Expect(2) = 0.036 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -1 / -1 Query: 285 IHHAHKPPAHLSQQPAPQCSSPR 217 +HH H+PPAH Q PA Q S R Sbjct: 523 LHHPHRPPAHSRQLPARQASPGR 455 Score = 24.0 bits (46), Expect(2) = 0.036 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -2 / -2 Query: 425 RAVVPAPETLRGLTVPPVLT 366 R PAP LR T PP L+ Sbjct: 972 RLAFPAPFRLRPFTQPPTLS 913
>LOC_Os01g70140:12001.t06315:unspliced-genomic ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed| Length = 3244 Score = 39.1 bits (79), Expect = 0.046 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 / +2 Query: 333 HKKHSGAPWHTAWGEHIHHAHKPPAHLSQQPAPQ 232 H+ H AP H G H+ H H PP + P P+ Sbjct: 224 HRHHRRAPRHALRGRHLRHRHPPPRYSIPTPLPR 325
>LOC_Os01g03144:12001.t00206:unspliced-genomic ABC-2 type transporter family protein, expressed| Length = 7603 Score = 36.8 bits (74), Expect = 0.22 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = -1 / +1 Query: 264 PAHLSQQPAPQCSSPRNA**PCPWGSTWRSW 172 PA S P P+C SP P P +TWRSW Sbjct: 7024 PAPASPSPPPRCCSPACRSPPSPPCTTWRSW 7116
>LOC_Os11g47360:12011.t04211:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2743 Score = 36.3 bits (73), Expect = 0.31 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +1 / +1 Query: 556 DGASPSFTHPWILNYSSFCCNRLY 627 +G SP+F PW L +CC+RLY Sbjct: 1813 EGVSPTFRRPWQLYRLHWCCSRLY 1884
>LOC_Os02g14059:12002.t01201:unspliced-genomic 60S ribosomal protein L11-1, putative, expressed| Length = 10696 Score = 36.3 bits (73), Expect = 0.31 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 / +3 Query: 538 LGICFRDGASPSFTHPWILNYSSFCCNRLY 627 + + F +G +P F PW L + +CC+RL+ Sbjct: 6558 MSLIFGEGVTPKFCRPW*LYWLYWCCSRLH 6647
>LOC_Os05g29750:12005.t02575:unspliced-genomic cytochrome P450 71E1, putative, expressed| Length = 1809 Score = 35.9 bits (72), Expect = 0.42 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -1 / -1 Query: 324 HSGAPWHTAWGEHIHHAHKPPAHLSQQPAPQCSSPRNA**PCP 196 H+ APW + W PPAH S++P P S A P P Sbjct: 1647 HA*APWRSHWSRSCPAMASPPAHPSRRPPPPPSRNGTASSPRP 1519
>LOC_Os11g29390:12011.t02544:unspliced-genomic bifunctional dihydrofolate reductase-thymidylate synthase, putative,| expressed Length = 7424 Score = 34.1 bits (68), Expect = 1.5 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 / +3 Query: 340 WMAQETQWCTLAYSLGRTYPSCTQASCTS 254 W++ T WC +++SL TY S Q+ C S Sbjct: 4524 WISMATLWC*VSFSLAPTYLSMYQSICPS 4610
>LOC_Os02g54530:12002.t05032:unspliced-genomic pathogenesis-related protein PR-1 precursor, putative, expressed| Length = 571 Score = 34.1 bits (68), Expect = 1.5 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 / +3 Query: 403 KRCGGSRFLLFSRERTRTM*AWMAQETQWCTLAYSLGRT 287 +RCGG+R +R TR A A +WCT GRT Sbjct: 195 RRCGGTRGWRRTRRGTRRRGAAPAAAARWCTRTGRTGRT 311
>LOC_Os01g70260:12001.t06327:unspliced-genomic receptor-like protein kinase 5 precursor, putative, expressed| Length = 4327 Score = 34.1 bits (68), Expect = 1.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 / +1 Query: 294 GEHIHHAHKPPAHLSQQPAPQCSSPR 217 G H+HH H+ PA + PA SPR Sbjct: 787 GAHVHHHHRHPARATASPAAIQDSPR 864
>LOC_Os02g36830:12002.t03320:unspliced-genomic cytokinin-O-glucosyltransferase 2, putative| Length = 3234 Score = 27.2 bits (53), Expect(2) = 1.5 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -1 / +1 Query: 204 PCPWGSTWRSWSSGCT 157 PC GS+WR W G + Sbjct: 1159 PCCRGSSWRRWRGGAS 1206 Score = 24.0 bits (46), Expect(2) = 1.5 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = -1 / +1 Query: 243 PAPQCSSPRNA**PCP 196 P P CSS A PCP Sbjct: 1018 PGPWCSSTTGASPPCP 1065
>LOC_Os10g02380:12010.t00130:unspliced-genomic NAD(P)H-dependent oxidoreductase, putative, expressed| Length = 2266 Score = 25.8 bits (50), Expect(2) = 1.6 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = -1 / +2 Query: 324 HSGAPWHTAWGEHIHHAHKPPAHL 253 H G P H G H HA + A L Sbjct: 116 HGGVPLHLLGGHHRRHAPRHRARL 187 Score = 25.4 bits (49), Expect(2) = 1.6 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -1 / +1 Query: 276 AHKPPAHLSQQPAPQCSSP 220 + +P S PAP CSSP Sbjct: 244 SRRPSGVASSPPAPTCSSP 300
>LOC_Os08g37970:12008.t03533:unspliced-genomic myb-like DNA-binding domain containing protein, expressed| Length = 1500 Score = 33.6 bits (67), Expect = 2.1 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = -1 / -3 Query: 315 APWHTAWGEHIHHAHKPPAHLSQQPAPQCSSPR 217 A W W HH H+ PA + P P C R Sbjct: 994 ASWRPGWQRRRHHHHRRPA*SAPPPPPPCRHRR 896
>LOC_Os03g59894:12003.t05234:unspliced-genomic Transposable element protein, putative, MuDR| Length = 3338 Score = 33.6 bits (67), Expect = 2.1 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +1 / -1 Query: 556 DGASPSFTHPWILNYSSFCCNRLY 627 +G SP F PW + + +CC+RL+ Sbjct: 1217 EGVSPMFRRPW*IYWLRWCCSRLH 1146
>LOC_Os12g24220:12012.t02151:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5083 Score = 32.2 bits (64), Expect(2) = 2.6 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -1 / +3 Query: 285 IHHAHKPPAHLSQQPAPQ 232 +HH H+PPAH Q PA Q Sbjct: 3108 LHHPHRPPAHS*QLPARQ 3161 Score = 23.5 bits (45), Expect(2) = 2.6 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -2 / +3 Query: 425 RAVVPAPETLRGLTVPPVLT 366 R PAP LR T PP L+ Sbjct: 2658 RLAFPAPFGLRPFTQPPTLS 2717
>LOC_Os02g03760:12002.t00275:unspliced-genomic S-ribonuclease binding protein SBP1, putative, expressed| Length = 3802 Score = 26.7 bits (52), Expect(2) = 2.8 Identities = 9/18 (50%), Positives = 9/18 (50%) Frame = -1 / -2 Query: 267 PPAHLSQQPAPQCSSPRN 214 P H P P CSSP N Sbjct: 450 PSGHSRTSPRPSCSSPAN 397 Score = 23.5 bits (45), Expect(2) = 2.8 Identities = 5/10 (50%), Positives = 8/10 (80%) Frame = -1 / -2 Query: 336 WHKKHSGAPW 307 WH+ +G+PW Sbjct: 507 WHQTRTGSPW 478
>LOC_Os01g38750:12001.t03409:unspliced-genomic hypothetical protein| Length = 721 Score = 33.1 bits (66), Expect = 2.8 Identities = 17/57 (29%), Positives = 25/57 (43%) Frame = -3 / -2 Query: 367 RERTRTM*AWMAQETQWCTLAYSLGRTYPSCTQASCTSLTAACSTMFLTKKRLIALS 197 R R R AW+A E + ++A+ G C +CT+ T + LT LS Sbjct: 681 RLRRRRSPAWLAAEAELASVAWESGGGGRDCPSGTCTTGTPTTAPPVLTSTSAATLS 511
>LOC_Os12g18190:12012.t01669:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10187 Score = 33.1 bits (66), Expect = 2.9 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +1 / +3 Query: 253 EMCRRLVCMMDMFSPSCMPRCTTVFLVPS 339 + C R +C++ +F P C+ RC + L+ S Sbjct: 9180 DKCNRSICLVFIFQPMCLLRCCIINLMKS 9266
>LOC_Os02g19330:12002.t01726:unspliced-genomic expressed protein| Length = 7779 Score = 33.1 bits (66), Expect = 2.9 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = -1 / -2 Query: 327 KHSGAPWHTAWGEHIHHAHKPPAHLSQQPAPQCSSPRN 214 K G H H H PP HL+Q P+CS ++ Sbjct: 752 KQKGILHHQGQQNQHRHHHHPPIHLAQPLPPRCSQRKH 639
>LOC_Os01g10230:12001.t00898:unspliced-genomic lachrymatory factor synthase, putative| Length = 579 Score = 32.7 bits (65), Expect = 3.9 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 / +2 Query: 295 GRTYPSCTQASCTSLTAACSTMFLTKKRLIALS 197 GRT P+ T + TSL + C++ T R++A S Sbjct: 125 GRTSPASTPRTATSLASTCASASATAARMVASS 223
>LOC_Os10g21060:12010.t01597:unspliced-genomic cytochrome P450 76B1, putative| Length = 1489 Score = 32.7 bits (65), Expect = 3.9 Identities = 14/44 (31%), Positives = 18/44 (40%) Frame = -1 / +3 Query: 312 PWHTAWGEHIHHAHKPPAHLSQQPAPQCSSPRNA**PCPWGSTW 181 P + W +PP H + PAP +PR A P G W Sbjct: 84 PPSSTWTNTASAHRQPPRHRQRPPAPLPGAPRRAARPAHGGPAW 215
>LOC_Os05g51210:12005.t04549:unspliced-genomic hypothetical protein| Length = 207 Score = 32.7 bits (65), Expect = 3.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 / +2 Query: 312 PWHTAWGEHIHHAHKPPAHLSQQPAPQCSSPR 217 PWH A+ E H + + L + P PQ S+ R Sbjct: 11 PWHPAFNEQGHGVWRSRSRLCRSPLPQASTRR 106
>LOC_Os05g06830:12005.t00573:unspliced-genomic hypothetical protein| Length = 1583 Score = 32.7 bits (65), Expect = 3.9 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +1 / -1 Query: 556 DGASPSFTHPWILNYSSFCCNRLY 627 +G SP+F PW + +CC+RL+ Sbjct: 986 EGVSPTFRRPW*IYRLHWCCSRLH 915
>LOC_Os03g36239:12003.t03095:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 12553 Score = 32.7 bits (65), Expect = 3.9 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +1 / +1 Query: 271 VCMMDMFSPSCMPRCTTVFLVPSMLTLSVSAPVRTGGTVSPRS 399 V + F+P C P+C + P S S P GTVSP S Sbjct: 8215 VSLQQPFAPYCFPQCRS*ATPPQQSLASHSFP*CRSGTVSPLS 8343
>LOC_Os02g36100:12002.t03247:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 7068 Score = 32.7 bits (65), Expect = 3.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 / +1 Query: 289 FSPSCMPRCTTVFLVPSMLTLSVSAPVRTGGTVSPRS 399 F+P C P+C + +P S S P GTVSP S Sbjct: 2548 FAPYCFPQCRS*AALPQQSLASHSFP*CRSGTVSPLS 2658
>LOC_Os02g35510:12002.t03189:unspliced-genomic hypothetical protein| Length = 1453 Score = 32.7 bits (65), Expect = 3.9 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +1 / +3 Query: 721 LWLPPCGFVFMPLYFSSPFMM 783 L++PPC F+F PL+FS F + Sbjct: 417 LFVPPCCFLFFPLFFSFLFFI 479
>LOC_Os12g42200:12012.t03894:unspliced-genomic ATCHX19, putative, expressed| Length = 6392 Score = 28.6 bits (56), Expect(2) = 4.2 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = -1 / +3 Query: 198 PWGSTWRSWSSG 163 PWG+TWR SSG Sbjct: 5826 PWGATWRRRSSG 5861 Score = 26.7 bits (52), Expect(2) = 4.2 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -2 / +1 Query: 395 RGLTVPPVLTGADTDNVSMDGTRNTVVHL 309 R L VPP G D V+ G R VHL Sbjct: 4333 RHLPVPPPRAGVDGAAVTGGGARQGAVHL 4419
>LOC_Os11g32520:12011.t02848:unspliced-genomic indole-3-acetic acid-amido synthetase GH3.4, putative| Length = 1561 Score = 25.4 bits (49), Expect(3) = 5.2 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -1 / +2 Query: 252 SQQPAPQCSSPRNA**PCPWGST 184 S PA + SSPR + C W ST Sbjct: 260 SPPPAARTSSPRRSRSACRWWST 328 Score = 23.5 bits (45), Expect(3) = 5.2 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -1 / +3 Query: 198 PWGSTWRSWSS 166 PW ST R WSS Sbjct: 1197 PWRSTSRCWSS 1229 Score = 22.1 bits (42), Expect(3) = 5.2 Identities = 7/19 (36%), Positives = 10/19 (52%) Frame = -2 / +1 Query: 413 PAPETLRGLTVPPVLTGAD 357 PAP T +PP++ D Sbjct: 61 PAPATATAAALPPMIPACD 117
>LOC_Os07g33760:12007.t03054:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 3571 Score = 32.2 bits (64), Expect = 5.4 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 / -2 Query: 732 PLWFCLHALIF*FTIHDEPVISNVPPSKKYRSSLVNGSRENGII 863 P W + T+H PVIS VP +K R L + SR++ +I Sbjct: 2577 PPWLVGMHVFVQLTLHFPPVISPVPAQRKRRRCLSSCSRDSFVI 2446
>LOC_Os04g38042:12004.t03375:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3078 Score = 32.2 bits (64), Expect = 5.4 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 / -2 Query: 732 PLWFCLHALIF*FTIHDEPVISNVPPSKKYRSSLVNGSRENGII 863 P W + T+H PVIS VP +K R L + SR++ +I Sbjct: 1451 PPWLVGMHVFVKLTLHFPPVISPVPAQRKRRRCLSSCSRDSYVI 1320
>LOC_Os11g22570:12011.t01927:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5951 Score = 32.2 bits (64), Expect = 5.4 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +1 / +1 Query: 289 FSPSCMPRCTTVFLVPSMLTLSVSAPVRTGGTVSPRS 399 F+P C P+C + P S S P GTVSP S Sbjct: 1354 FAPYCFPQCRS*ATPPQQPLASHSFPYSRDGTVSPIS 1464
>LOC_Os03g36650:12003.t03134:unspliced-genomic serine/threonine kinase-like protein, putative, expressed| Length = 887 Score = 32.2 bits (64), Expect = 5.4 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 / +2 Query: 276 AHKPPAHLSQQPAPQCSSPRNA**PCPWGSTWRSW 172 A P LS++ P+ +SP A P WG++ RSW Sbjct: 59 ARAPWWSLSRRAPPRTASPPTAPSPVTWGASSRSW 163
>LOC_Os03g18480:12003.t01620:unspliced-genomic DNA binding protein, putative, expressed| Length = 2352 Score = 32.2 bits (64), Expect = 5.4 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = -1 / +3 Query: 336 WHKKHSGAPWHTAWGEHIHHAHKPPAHLSQQPA 238 WH+ H P EH H H PP+ ++ A Sbjct: 1704 WHRPHHPPPHRRPHAEHRHARHPPPSRRRRRAA 1802
>LOC_Os02g10430:12002.t00891:unspliced-genomic expressed protein| Length = 2184 Score = 30.4 bits (60), Expect(2) = 5.4 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = -1 / +2 Query: 282 HHAHKPPAHLSQQPAPQCSSPR 217 HH + P+ +S +P+P+ +SPR Sbjct: 20 HHRYPSPSRISGRPSPRLASPR 85 Score = 23.1 bits (44), Expect(2) = 5.4 Identities = 6/13 (46%), Positives = 9/13 (69%) Frame = -1 / +3 Query: 204 PCPWGSTWRSWSS 166 PC + + W +WSS Sbjct: 957 PCTFCTQWHTWSS 995
>LOC_Os06g08280:12006.t00709:unspliced-genomic protein kinase domain containing protein, expressed| Length = 5401 Score = 24.4 bits (47), Expect(2) = 6.5 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = -1 / +3 Query: 288 HIHHAHKPPAHLSQQPAPQCSSP 220 H+HH ++ P + + PAP P Sbjct: 102 HLHHHNRRPPPIPKFPAPPPPPP 170 Score = 24.4 bits (47), Expect(2) = 6.5 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -1 / +2 Query: 201 CPWGSTWRSWSSG 163 C +G +WR W SG Sbjct: 197 CCFGESWRWWRSG 235
>LOC_Os11g04060:12011.t00296:unspliced-genomic major facilitator superfamily antiporter, putative| Length = 4353 Score = 25.8 bits (50), Expect(2) = 6.6 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +1 / +3 Query: 565 SPSFTHPWILNYSSFCCNRLY 627 S S T PW + +C N+LY Sbjct: 2034 SISLTLPWCIIVCCYCSNKLY 2096 Score = 23.1 bits (44), Expect(2) = 6.6 Identities = 6/10 (60%), Positives = 8/10 (80%) Frame = +1 / +1 Query: 709 LLVCLWLPPC 738 L+ C+WLP C Sbjct: 2083 LISCIWLPVC 2112
>LOC_Os01g63620:12001.t05730:unspliced-genomic expressed protein| Length = 2872 Score = 28.1 bits (55), Expect(2) = 6.8 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -3 / +1 Query: 340 WMAQETQWCTLAYSLGRTYPSCTQASCTSLTAACS 236 W A+ +WC+ + S + C + S T +ACS Sbjct: 931 WGARSRRWCSSSGSCRASRCRCGRRSSTRTCSACS 1035 Score = 25.4 bits (49), Expect(2) = 6.8 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = -1 / +1 Query: 195 WGSTWRSWSSGCT 157 WGS+WR W T Sbjct: 1597 WGSSWRRWRPSWT 1635
>LOC_Os07g35580:12007.t03233:unspliced-genomic CRK6, putative, expressed| Length = 4381 Score = 30.4 bits (60), Expect(2) = 7.3 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 / -1 Query: 889 LINRIRTALIMPFSRDPFTNELLYFFEG 806 L + TA+ P RDP TNE +Y G Sbjct: 2920 LCESLFTAISSPCGRDPCTNEYIYLLSG 2837 Score = 23.5 bits (45), Expect(2) = 7.3 Identities = 8/21 (38%), Positives = 10/21 (47%) Frame = -1 / -1 Query: 321 SGAPWHTAWGEHIHHAHKPPA 259 S APW +WG PP+ Sbjct: 703 STAPWRRSWGTGRRTRPSPPS 641
>LOC_Os10g21410:12010.t01629:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2073 Score = 31.8 bits (63), Expect = 7.4 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 / -2 Query: 732 PLWFCLHALIF*FTIHDEPVISNVPPSKKYRSSLVNGSRENGIIRAVLIR 881 P W + T+H PVIS VP +K R L + SR++ + ++R Sbjct: 1520 PPWLVGKHVFAQLTLHFPPVISPVPAQRKRRLCLSSCSRDSFVTFKAVVR 1371
>LOC_Os03g60710:12003.t05309:unspliced-genomic protein kinase APK1B, chloroplast precursor, putative, expressed| Length = 4825 Score = 31.8 bits (63), Expect = 7.4 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +2 / +1 Query: 551 SVMVPALVLLIPGY*TILVFAAIGC 625 S+++PA VL +PGY +L ++GC Sbjct: 466 SLLLPACVLALPGYGAVLFHDSMGC 540
>LOC_Os11g02780:12011.t00170:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5959 Score = 31.8 bits (63), Expect = 7.4 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +1 / +1 Query: 289 FSPSCMPRCTTVFLVPSMLTLSVSAPVRTGGTVSPRS 399 F+P C P+C + P S S P GTVSP S Sbjct: 1360 FAPYCFPQCRS*ATPPQQSLASHSFP*YRSGTVSPLS 1470
>LOC_Os10g08660:12010.t00686:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 5346 Score = 31.8 bits (63), Expect = 7.4 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 / -2 Query: 231 CSSPRNA**PCPWGSTWRSWSSGCT*H 151 CSS R+A C T RSW+S CT H Sbjct: 4820 CSSSRSAICACKEKKTVRSWTSTCTAH 4740
>LOC_Os08g18180:12008.t01688:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 5963 Score = 31.8 bits (63), Expect = 7.4 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 / -2 Query: 231 CSSPRNA**PCPWGSTWRSWSSGCT*H 151 CSS R+A C T RSW+S CT H Sbjct: 5335 CSSSRSAICACKEKKTVRSWTSTCTAH 5255
>LOC_Os08g01130:12008.t00013:unspliced-genomic XPG I-region family protein, expressed| Length = 4704 Score = 31.8 bits (63), Expect = 7.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 / +2 Query: 721 LWLPPCGFVFMPLYFSSPFMMSL*FQT 801 L+LPP F+++ +YF S F M++ QT Sbjct: 989 LYLPPSLFIYLFIYFFSSFRMAVSLQT 1069
>LOC_Os06g33650:12006.t03062:unspliced-genomic hypothetical protein| Length = 3199 Score = 31.8 bits (63), Expect = 7.4 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 / +1 Query: 559 GASPSFTHPWILNYSSFCCNRLY 627 G SP+F PW + CC+RLY Sbjct: 1021 GVSPTFRRPW*ICRLHRCCSRLY 1089
>LOC_Os04g41599:12004.t03718:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 10052 Score = 31.8 bits (63), Expect = 7.4 Identities = 9/28 (32%), Positives = 15/28 (53%) Frame = -1 / +3 Query: 309 WHTAWGEHIHHAHKPPAHLSQQPAPQCS 226 W +G+ +H H+ P H +P +CS Sbjct: 2880 WELDYGQWVHILHESPRHEEHEPKQRCS 2963
>LOC_Os01g23770:12001.t02103:unspliced-genomic SRF-type transcription factor family protein| Length = 1295 Score = 31.8 bits (63), Expect = 7.4 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = +1 / -3 Query: 292 SPSCMPRCTTVFLVPSMLTLSVSAPVRTGGTVSPRSVSGAGTTA 423 SPSC P + + L S+L+L R + P S S G A Sbjct: 438 SPSCRPIASILALAASILSLRYLCSFRVSSSAMPSSASSHGLNA 307
>LOC_Os11g27329:12011.t004352:unspliced-genomic serine carboxypeptidase 1 precursor, putative, expressed| Length = 31581 Score = 28.6 bits (56), Expect(2) = 8.8 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -2 / -1 Query: 428 PRAVVPAPETLRGLTVPPVLTGADTDNVSMDGTRN 324 P+A PAP R PP++ T V +D N Sbjct: 18216 PQAPCPAPSKSRSHQAPPLVRTRATKKVKVDAAEN 18112 Score = 27.6 bits (54), Expect(2) = 8.8 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = -1 / -2 Query: 333 HKKHSGAPWHTAWGEHIHHAHKPPAHLSQQPAP 235 H S +P + H+H + +P +H S P P Sbjct: 3380 HASSSSSPSLSPSSLHLHSSSRPASHASPPPLP 3282
>LOC_Os07g02440:12007.t00135:unspliced-genomic peroxidase 50 precursor, putative, expressed| Length = 3269 Score = 26.3 bits (51), Expect(2) = 9.0 Identities = 9/25 (36%), Positives = 12/25 (48%) Frame = -1 / -2 Query: 330 KKHSGAPWHTAWGEHIHHAHKPPAH 256 + H GA H+ +H H PP H Sbjct: 265 RAHGGAARHSDQHQHRRRRHPPPHH 191 Score = 22.1 bits (42), Expect(2) = 9.0 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -1 / -1 Query: 267 PPAHLSQQPAPQCSSPRNA* 208 PP+ S P SSPR+A* Sbjct: 212 PPSAASSPPPSCTSSPRSA* 153 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 283,744,972 Number of extensions: 4190281 Number of successful extensions: 22065 Number of sequences better than 10.0: 50 Length of query: 305 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 256 Effective length of database: 52,856,264 Effective search space: 13531203584 Effective search space used: 13531203584 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
