ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62g20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120182:Os01g0920200 | 151 | 5e-37 | 2 | Os02g0726500:Os02g0726500 | 33 | 0.26 | 3 | AK070550:Os06g0284200 | 30 | 1.3 | 4 | AK068496:Os06g0284200 | 30 | 1.3 | 5 | Os11g0673000:Os11g0673000 | 29 | 3.8 | 6 | Os09g0309300:Os09g0309300 | 29 | 3.8 | 7 | AK119745: | 29 | 3.8 | 8 | AK120186:Os05g0510300 | 29 | 3.8 | 9 | AK070567:Os12g0574400 | 28 | 4.9 | 10 | Os02g0555100:Os02g0555100 | 28 | 6.4 | 11 | Os02g0633000:Os02g0633000 | 28 | 8.4 | 12 | AK120489:Os05g0495400 | 28 | 8.4 | 13 | AK102907:Os04g0107500 | 28 | 8.4 | 14 | AK098959:Os09g0539100 | 28 | 8.4 | 15 | AK072449:Os05g0495400 | 28 | 8.4 | 16 | AK071977:Os09g0539100 | 28 | 8.4 | 17 | AK067010:Os04g0107500 | 28 | 8.4 | 18 | AK066268:Os05g0495400 | 28 | 8.4 |
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>AK120182:Os01g0920200 | Length = 113 Score = 151 bits (381), Expect = 5e-37 Identities = 80/115 (69%), Positives = 89/115 (77%) Frame = +1 Query: 94 MRSSINRPPTPDQXXXXXXXGVGKEASLGDIINLKLVESGXXXXXXXXXXXXXVECGWRD 273 M +SINRPPTP++ KE SL +IIN+KLVESG VECGWRD Sbjct: 1 MWASINRPPTPNREEDPQ-----KELSLREIINVKLVESGEKEKLMELLRERLVECGWRD 55 Query: 274 DMKALCRAYARKKGRNNVTLDDLIHVITPKGRASVPDTVKAELLQRIRSFLMSSS 438 +MKALCRAYARKKGRNNVT+DDLIHVITPKGRASVPD+VKAELLQRI+SFLMSSS Sbjct: 56 EMKALCRAYARKKGRNNVTVDDLIHVITPKGRASVPDSVKAELLQRIQSFLMSSS 110
>Os02g0726500:Os02g0726500 | Length = 510 Score = 32.7 bits (73), Expect = 0.26 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = -3 Query: 621 VMVQSEDRTNHMPDQEPRPHHQIHFMSIFAASFPEALHVLRSMPPASYTRLPIGMIHGLP 442 ++V D+T+ D P I + F S + + +LR +PP R+ +GM H +P Sbjct: 142 LIVPELDKTSFWND--PSEFQDIFDVEHFITSLRDEVRILRELPPRVKRRVELGMFHSMP 199
>AK070550:Os06g0284200 | Length = 508 Score = 30.4 bits (67), Expect = 1.3 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = -3 Query: 621 VMVQSEDRTNHMPDQEPRPHHQIHFMSIFAASFPEALHVLRSMPPASYTRLPIGMIHGLP 442 ++V D+T+ D P I + F S + + +LR +PP R+ GM H +P Sbjct: 140 LVVPELDKTSFWND--PSEFQDIFDVEHFITSLRDEVRILRELPPRVKRRVEHGMYHSMP 197
>AK068496:Os06g0284200 | Length = 508 Score = 30.4 bits (67), Expect = 1.3 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = -3 Query: 621 VMVQSEDRTNHMPDQEPRPHHQIHFMSIFAASFPEALHVLRSMPPASYTRLPIGMIHGLP 442 ++V D+T+ D P I + F S + + +LR +PP R+ GM H +P Sbjct: 140 LVVPELDKTSFWND--PSEFQDIFDVEHFITSLRDEVRILRELPPRVKRRVEHGMYHSMP 197
>Os11g0673000:Os11g0673000 | Length = 515 Score = 28.9 bits (63), Expect = 3.8 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -3 Query: 588 MPDQEPRPHHQ-IHFMSIFAASFPEALHVLRSMPPASYTRLPI 463 +P P PHH + + + ++ P AL +LR +PP + LP+ Sbjct: 55 LPSSPPSPHHHSLAALLLLSSPPPPALPLLRLVPPHAPPPLPL 97
>Os09g0309300:Os09g0309300 | Length = 173 Score = 28.9 bits (63), Expect = 3.8 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +1 Query: 4 AKQRRGGGDRIQEPARRRSRKKPEALSNPSMRSS---INRPPTP 126 A+ RRGGG ++ RR R+ A S RSS + RPP P Sbjct: 54 AEARRGGGGGGEQRGMRRRRRGEAAGPRTSARSSRRPLPRPPPP 97
>AK119745: | Length = 808 Score = 28.9 bits (63), Expect = 3.8 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +1 Query: 28 DRIQEPARRRSRKKPEALSNPSMRSSINRPPTP 126 DR + R R R +P A P+ R+S++RPP P Sbjct: 481 DRSVQVGRERERTRPTAA--PTRRASMSRPPPP 511
>AK120186:Os05g0510300 | Length = 644 Score = 28.9 bits (63), Expect = 3.8 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 7/61 (11%) Frame = +1 Query: 262 GWRDDMKALCRAYARKKGRNNVTLDDLI----HVITPKGR---ASVPDTVKAELLQRIRS 420 GW DD++ R++ +N T D +I+ GR + +P++++ L+Q +RS Sbjct: 575 GWVDDVRNFMHTIKRRRLQNTGTPQDSDTMRKELISESGRIFRSKIPESLREHLIQALRS 634 Query: 421 F 423 + Sbjct: 635 Y 635
>AK070567:Os12g0574400 | Length = 1274 Score = 28.5 bits (62), Expect = 4.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 16 RGGGDRIQEPARRRSRKKPEA--LSNPSMRSSINRPPTPD 129 RGGG R PA RR R+KP + S + + RPP D Sbjct: 4 RGGGGR--PPASRRRRRKPRGGRMERVSTPARLRRPPRLD 41
>Os02g0555100:Os02g0555100 | Length = 596 Score = 28.1 bits (61), Expect = 6.4 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%) Frame = -3 Query: 567 PHHQIH-FMSIFAA------SFPEALHVLRSMPPASYTRLPIGMIHGLPKRGRHEK*SDA 409 PH H + S+ AA + P+AL +L MPPAS + + + RH + S+A Sbjct: 91 PHKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTV--ISSLARHGRESEA 148 Query: 408 LQ 403 L+ Sbjct: 149 LR 150
>Os02g0633000:Os02g0633000 | Length = 1817 Score = 27.7 bits (60), Expect = 8.4 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Frame = -3 Query: 522 PEALHVLRSMPPASYTRLPIGMIHGLPKRGRHEK*SDALQQLCLHRVG-HRGSSFWSNN 349 PE + PP + RLP + P K A +Q C H HRG + W NN Sbjct: 513 PEEMAPRLPTPPGA-KRLPKRTVENRPSTSAFGK--GAPRQFCHHEASNHRGKAVWGNN 568
>AK120489:Os05g0495400 | Length = 118 Score = 27.7 bits (60), Expect = 8.4 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 10 QRRG--GGDRIQEPARRRSRKKPEALSNPSMRSSINR 114 QRRG G DRI+ P R++ + +N S++S+ +R Sbjct: 82 QRRGRIGSDRIESPGRKKIKHVASKPNNQSIKSNESR 118
>AK102907:Os04g0107500 | Length = 316 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = +1 Query: 313 GRNNVTLDDLIHVITPKGRASVPDTVKAEL 402 G +NV L D VITP+ V D VKA L Sbjct: 272 GMDNVVLSDHRAVITPESIQGVVDVVKANL 301
>AK098959:Os09g0539100 | Length = 443 Score = 27.7 bits (60), Expect = 8.4 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = -2 Query: 493 ASSFLHAPSNRYDTWATKARKT*EMIGCAAAALPSPCRA 377 +SS L A S+ A AR+ AAA+LPSP RA Sbjct: 6 SSSLLAAASSSSRAAAVSARRAPSASPAAAASLPSPSRA 44
>AK072449:Os05g0495400 | Length = 118 Score = 27.7 bits (60), Expect = 8.4 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 10 QRRG--GGDRIQEPARRRSRKKPEALSNPSMRSSINR 114 QRRG G DRI+ P R++ + +N S++S+ +R Sbjct: 82 QRRGRIGSDRIESPGRKKIKHVASKPNNQSIKSNESR 118
>AK071977:Os09g0539100 | Length = 443 Score = 27.7 bits (60), Expect = 8.4 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = -2 Query: 493 ASSFLHAPSNRYDTWATKARKT*EMIGCAAAALPSPCRA 377 +SS L A S+ A AR+ AAA+LPSP RA Sbjct: 6 SSSLLAAASSSSRAAAVSARRAPSASPAAAASLPSPSRA 44
>AK067010:Os04g0107500 | Length = 316 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = +1 Query: 313 GRNNVTLDDLIHVITPKGRASVPDTVKAEL 402 G +NV L D VITP+ V D VKA L Sbjct: 272 GMDNVVLSDHRAVITPESIQGVVDVVKANL 301
>AK066268:Os05g0495400 | Length = 118 Score = 27.7 bits (60), Expect = 8.4 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 10 QRRG--GGDRIQEPARRRSRKKPEALSNPSMRSSINR 114 QRRG G DRI+ P R++ + +N S++S+ +R Sbjct: 82 QRRGRIGSDRIESPGRKKIKHVASKPNNQSIKSNESR 118 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,142,971 Number of extensions: 497874 Number of successful extensions: 1618 Number of sequences better than 10.0: 18 Number of HSP's gapped: 1611 Number of HSP's successfully gapped: 18 Length of query: 244 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 146 Effective length of database: 11,475,837 Effective search space: 1675472202 Effective search space used: 1675472202 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
