ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf62g20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6WNK7:SUS1_YEAST Protein SUS1 - Saccharomyces cerevisiae (Baker... 35 0.39
2P57230:SYFB_BUCAI Phenylalanyl-tRNA synthetase beta chain - Buch... 31 5.6
3Q9RI00:HIS8_PSEST Histidinol-phosphate aminotransferase - Pseudo... 30 9.6

>Q6WNK7:SUS1_YEAST Protein SUS1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 96
 Score = 34.7 bits (78), Expect = 0.39
 Identities = 24/86 (27%), Positives = 37/86 (43%)
 Frame = +1

Query: 169 ASLGDIINLKLVESGXXXXXXXXXXXXXVECGWRDDMKALCRAYARKKGRNNVTLDDLIH 348
           A L   I   LVESG             ++ GW D +K L ++        N T   ++ 
Sbjct: 6   AQLKSQIQQYLVESGNYELISNELKARLLQEGWVDKVKDLTKSEMNINESTNFT--QILS 63

Query: 349 VITPKGRASVPDTVKAELLQRIRSFL 426
            + PK    V D+ +  +L++IR FL
Sbjct: 64  TVEPKALEMVSDSTRETVLKQIREFL 89



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>P57230:SYFB_BUCAI Phenylalanyl-tRNA synthetase beta chain - Buchnera aphidicola|
           subsp. Acyrthosiphon pisum (Acyrthosiphon pisum
           symbiotic bacterium)
          Length = 795

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
 Frame = +1

Query: 553 DLVMWSW----FLVRHVVGPVLRLYHYHTVSVVPTSRFATLHCAVASNAT 690
           D++  SW     +   V+G +LR+Y Y+ V ++P   F  L+C+  +  T
Sbjct: 444 DVISPSWRFDILIEEDVIGDILRIYEYNNVHLIPLKEF--LNCSKKNELT 491



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>Q9RI00:HIS8_PSEST Histidinol-phosphate aminotransferase - Pseudomonas stutzeri|
           (Pseudomonas perfectomarina)
          Length = 366

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = +3

Query: 468 EGACRKLEASILERVTLQGRKLQIST*NGSGDVVVVPGQACGWSCPPTVPLPHCIRSANL 647
           +G+  +L+A + ER  L+    QI+  NGS D++ +  + CG + P  V   H    A  
Sbjct: 71  DGSGFRLKAKLAERFGLKSE--QITLGNGSNDIIDLVARCCG-AGPNAVFSAHAF--AAY 125

Query: 648 PLCNAA 665
           PLC  A
Sbjct: 126 PLCTQA 131


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 120,556,760
Number of extensions: 2570241
Number of successful extensions: 7061
Number of sequences better than 10.0: 3
Number of HSP's gapped: 7060
Number of HSP's successfully gapped: 3
Length of query: 244
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 134
Effective length of database: 70,513,989
Effective search space: 9448874526
Effective search space used: 9448874526
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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