| Clone Name | FLbaf62g20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001051753.1| Oryza sativa (japonica cultivar-group) Os01g0920200 (Os01g0920200) mRNA, complete cds Length = 733 Score = 293 bits (148), Expect = 4e-76 Identities = 229/256 (89%) Strand = Plus / Plus Query: 179 gagacatcatcaacctcaagttggtggagagcggcgagaaggagcggctgatggagcttc 238 |||| ||||||||| |||||||||| ||||| || ||||||||| |||||||||||| | Sbjct: 138 gagaaatcatcaacgtcaagttggtagagagtggggagaaggagaagctgatggagctcc 197 Query: 239 tccgggagcggctcgtcgagtgtggctggagggatgacatgaaggctctctgcagggcct 298 |||||||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| Sbjct: 198 tccgggagcggctcgtcgagtgcggctggagggacgagatgaaagctctctgcagggcct 257 Query: 299 atgcaaggaaaaagggaagaaataatgtaacattagatgatcttattcatgttattactc 358 |||||||||| || |||||||||||||| ||| ||||||||||||||||||| ||||||| Sbjct: 258 atgcaaggaagaaaggaagaaataatgttacagtagatgatcttattcatgtcattactc 317 Query: 359 caaaaggaagagcctcggtgcccgacacggtgaaggcagagctgctgcagcgcatccgat 418 ||||||||||||| || ||||| || | |||||||||||||| ||||| ||||||| || Sbjct: 318 caaaaggaagagcatcagtgcctgattctgtgaaggcagagctcctgcaacgcatccaat 377 Query: 419 catttctcatgtcttc 434 | |||||||||||||| Sbjct: 378 cctttctcatgtcttc 393 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 82 tccaatccaagcatgaggtcgtcgattaaccggccgccgac 122 |||||||||| |||| || |||||||||| ||||||||||| Sbjct: 56 tccaatccaatcatgtgggcgtcgattaatcggccgccgac 96
>dbj|AK120182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034A14, full insert sequence Length = 734 Score = 293 bits (148), Expect = 4e-76 Identities = 229/256 (89%) Strand = Plus / Plus Query: 179 gagacatcatcaacctcaagttggtggagagcggcgagaaggagcggctgatggagcttc 238 |||| ||||||||| |||||||||| ||||| || ||||||||| |||||||||||| | Sbjct: 139 gagaaatcatcaacgtcaagttggtagagagtggggagaaggagaagctgatggagctcc 198 Query: 239 tccgggagcggctcgtcgagtgtggctggagggatgacatgaaggctctctgcagggcct 298 |||||||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| Sbjct: 199 tccgggagcggctcgtcgagtgcggctggagggacgagatgaaagctctctgcagggcct 258 Query: 299 atgcaaggaaaaagggaagaaataatgtaacattagatgatcttattcatgttattactc 358 |||||||||| || |||||||||||||| ||| ||||||||||||||||||| ||||||| Sbjct: 259 atgcaaggaagaaaggaagaaataatgttacagtagatgatcttattcatgtcattactc 318 Query: 359 caaaaggaagagcctcggtgcccgacacggtgaaggcagagctgctgcagcgcatccgat 418 ||||||||||||| || ||||| || | |||||||||||||| ||||| ||||||| || Sbjct: 319 caaaaggaagagcatcagtgcctgattctgtgaaggcagagctcctgcaacgcatccaat 378 Query: 419 catttctcatgtcttc 434 | |||||||||||||| Sbjct: 379 cctttctcatgtcttc 394 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 82 tccaatccaagcatgaggtcgtcgattaaccggccgccgac 122 |||||||||| |||| || |||||||||| ||||||||||| Sbjct: 57 tccaatccaatcatgtgggcgtcgattaatcggccgccgac 97
>emb|CT834216.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI018D24, full insert sequence Length = 667 Score = 285 bits (144), Expect = 1e-73 Identities = 228/256 (89%) Strand = Plus / Plus Query: 179 gagacatcatcaacctcaagttggtggagagcggcgagaaggagcggctgatggagcttc 238 |||| ||||||||| |||||||||| ||||| || ||||||||| |||||||||||| | Sbjct: 139 gagaaatcatcaacgtcaagttggtagagagtggggagaaggagaagctgatggagctcc 198 Query: 239 tccgggagcggctcgtcgagtgtggctggagggatgacatgaaggctctctgcagggcct 298 |||||||||||||||||||||| ||||||||||| || ||||| |||||||||||||||| Sbjct: 199 tccgggagcggctcgtcgagtgcggctggagggacgagatgaaagctctctgcagggcct 258 Query: 299 atgcaaggaaaaagggaagaaataatgtaacattagatgatcttattcatgttattactc 358 |||||||||| || |||||||||||||| ||| ||||||||||||||||||| ||||||| Sbjct: 259 atgcaaggaagaaaggaagaaataatgttacagtagatgatcttattcatgtcattactc 318 Query: 359 caaaaggaagagcctcggtgcccgacacggtgaaggcagagctgctgcagcgcatccgat 418 ||||||||||||| || ||||| || | |||||||| ||||| ||||| ||||||| || Sbjct: 319 caaaaggaagagcatcagtgcctgattctgtgaaggcggagctcctgcaacgcatccaat 378 Query: 419 catttctcatgtcttc 434 | |||||||||||||| Sbjct: 379 cctttctcatgtcttc 394 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 82 tccaatccaagcatgaggtcgtcgattaaccggccgccgac 122 |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 57 tccaatccaatcatgagggcgtcgattaatcggccgccgac 97
>gb|DQ245497.1| Zea mays clone 16328 mRNA sequence Length = 754 Score = 220 bits (111), Expect = 5e-54 Identities = 213/247 (86%) Strand = Plus / Plus Query: 170 cttctctcggagacatcatcaacctcaagttggtggagagcggcgagaaggagcggctga 229 ||||||||||||| ||||| ||| |||||||||| |||| || ||||||||| ||| | Sbjct: 145 cttctctcggagagatcattaacatcaagttggtagagactggggagaaggagaagctaa 204 Query: 230 tggagcttctccgggagcggctcgtcgagtgtggctggagggatgacatgaaggctctct 289 ||||||| ||||| ||||| |||| ||||| |||||||||||||| |||||||| |||| Sbjct: 205 tggagctactccgcgagcgactcgctgagtgcggctggagggatgagatgaaggcactct 264 Query: 290 gcagggcctatgcaaggaaaaagggaagaaataatgtaacattagatgatcttattcatg 349 ||||||||||||||||||| || |||||||||||||| ||| ||||||| || ||||||| Sbjct: 265 gcagggcctatgcaaggaagaaaggaagaaataatgtgacagtagatgacctcattcatg 324 Query: 350 ttattactccaaaaggaagagcctcggtgcccgacacggtgaaggcagagctgctgcagc 409 |||||||||| ||||||||||| || ||||| || | ||||||||||| || ||||| | Sbjct: 325 ttattactccgaaaggaagagcatccgtgcctgattcagtgaaggcagaactcctgcaac 384 Query: 410 gcatccg 416 ||||||| Sbjct: 385 gcatccg 391
>gb|DQ245743.1| Zea mays clone 20058 mRNA sequence Length = 761 Score = 165 bits (83), Expect = 3e-37 Identities = 206/247 (83%) Strand = Plus / Plus Query: 170 cttctctcggagacatcatcaacctcaagttggtggagagcggcgagaaggagcggctga 229 ||||||||| ||| ||||| ||| ||||||| || ||||| || ||||||||| ||||| Sbjct: 147 cttctctcgtagaaatcattaacatcaagtttgtagagagtggagagaaggagaagctga 206 Query: 230 tggagcttctccgggagcggctcgtcgagtgtggctggagggatgacatgaaggctctct 289 |||||| ||||| ||||||||||||||||| ||||||| |||||| |||||||| ||| Sbjct: 207 cggagctcctccgcgagcggctcgtcgagtgcggctggatggatgagatgaaggcattct 266 Query: 290 gcagggcctatgcaaggaaaaagggaagaaataatgtaacattagatgatcttattcatg 349 |||||| ||||| |||||| || |||||||||||||| | ||||||| || ||||||| Sbjct: 267 gcagggactatgtaaggaagaaaggaagaaataatgtgagggtagatgacctcattcatg 326 Query: 350 ttattactccaaaaggaagagcctcggtgcccgacacggtgaaggcagagctgctgcagc 409 ||||| ||| ||||||||||| || ||||| | ||||||||||||| || ||||| | Sbjct: 327 ttattgttccgaaaggaagagcatcagtgcctgcttcggtgaaggcagaactcctgcaac 386 Query: 410 gcatccg 416 | ||||| Sbjct: 387 gtatccg 393
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 119 bits (60), Expect = 1e-23 Identities = 78/84 (92%) Strand = Plus / Minus Query: 287 tctgcagggcctatgcaaggaaaaagggaagaaataatgtaacattagatgatcttattc 346 |||| ||||||||||||||||| || |||||||||||||| ||| ||||||||||||||| Sbjct: 40165102 tctgtagggcctatgcaaggaagaaaggaagaaataatgttacagtagatgatcttattc 40165043 Query: 347 atgttattactccaaaaggaagag 370 |||| ||||||||||||||||||| Sbjct: 40165042 atgtcattactccaaaaggaagag 40165019 Score = 117 bits (59), Expect = 6e-23 Identities = 89/99 (89%) Strand = Plus / Minus Query: 196 aagttggtggagagcggcgagaaggagcggctgatggagcttctccgggagcggctcgtc 255 |||||||| ||||| || ||||||||| |||||||||||| |||||||||||||||||| Sbjct: 40165893 aagttggtagagagtggggagaaggagaagctgatggagctcctccgggagcggctcgtc 40165834 Query: 256 gagtgtggctggagggatgacatgaaggctctctgcagg 294 ||||| ||||||||||| || ||||| |||||||||||| Sbjct: 40165833 gagtgcggctggagggacgagatgaaagctctctgcagg 40165795 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 388 gtgaaggcagagctgctgcagcgcatccgatcatttctcatgtcttc 434 |||||||||||||| ||||| ||||||| ||| |||||||||||||| Sbjct: 40164571 gtgaaggcagagctcctgcaacgcatccaatcctttctcatgtcttc 40164525
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 119 bits (60), Expect = 1e-23 Identities = 78/84 (92%) Strand = Plus / Minus Query: 287 tctgcagggcctatgcaaggaaaaagggaagaaataatgtaacattagatgatcttattc 346 |||| ||||||||||||||||| || |||||||||||||| ||| ||||||||||||||| Sbjct: 108186 tctgtagggcctatgcaaggaagaaaggaagaaataatgttacagtagatgatcttattc 108127 Query: 347 atgttattactccaaaaggaagag 370 |||| ||||||||||||||||||| Sbjct: 108126 atgtcattactccaaaaggaagag 108103 Score = 117 bits (59), Expect = 6e-23 Identities = 89/99 (89%) Strand = Plus / Minus Query: 196 aagttggtggagagcggcgagaaggagcggctgatggagcttctccgggagcggctcgtc 255 |||||||| ||||| || ||||||||| |||||||||||| |||||||||||||||||| Sbjct: 108977 aagttggtagagagtggggagaaggagaagctgatggagctcctccgggagcggctcgtc 108918 Query: 256 gagtgtggctggagggatgacatgaaggctctctgcagg 294 ||||| ||||||||||| || ||||| |||||||||||| Sbjct: 108917 gagtgcggctggagggacgagatgaaagctctctgcagg 108879 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 388 gtgaaggcagagctgctgcagcgcatccgatcatttctcatgtcttc 434 |||||||||||||| ||||| ||||||| ||| |||||||||||||| Sbjct: 107655 gtgaaggcagagctcctgcaacgcatccaatcctttctcatgtcttc 107609
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 119 bits (60), Expect = 1e-23 Identities = 78/84 (92%) Strand = Plus / Minus Query: 287 tctgcagggcctatgcaaggaaaaagggaagaaataatgtaacattagatgatcttattc 346 |||| ||||||||||||||||| || |||||||||||||| ||| ||||||||||||||| Sbjct: 30880 tctgtagggcctatgcaaggaagaaaggaagaaataatgttacagtagatgatcttattc 30821 Query: 347 atgttattactccaaaaggaagag 370 |||| ||||||||||||||||||| Sbjct: 30820 atgtcattactccaaaaggaagag 30797 Score = 117 bits (59), Expect = 6e-23 Identities = 89/99 (89%) Strand = Plus / Minus Query: 196 aagttggtggagagcggcgagaaggagcggctgatggagcttctccgggagcggctcgtc 255 |||||||| ||||| || ||||||||| |||||||||||| |||||||||||||||||| Sbjct: 31671 aagttggtagagagtggggagaaggagaagctgatggagctcctccgggagcggctcgtc 31612 Query: 256 gagtgtggctggagggatgacatgaaggctctctgcagg 294 ||||| ||||||||||| || ||||| |||||||||||| Sbjct: 31611 gagtgcggctggagggacgagatgaaagctctctgcagg 31573 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 388 gtgaaggcagagctgctgcagcgcatccgatcatttctcatgtcttc 434 |||||||||||||| ||||| ||||||| ||| |||||||||||||| Sbjct: 30349 gtgaaggcagagctcctgcaacgcatccaatcctttctcatgtcttc 30303
>ref|NM_113624.3| Arabidopsis thaliana unknown protein (AT3G27100) mRNA, complete cds Length = 585 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 179 gagacatcatcaacctcaagttggtggagagcggcgagaaggag 222 |||| ||||||||| |||||||||||||||| || ||||||||| Sbjct: 172 gagaaatcatcaacgtcaagttggtggagagtggagagaaggag 215
>gb|BT010609.1| Arabidopsis thaliana At3g27100 gene, complete cds Length = 348 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 179 gagacatcatcaacctcaagttggtggagagcggcgagaaggag 222 |||| ||||||||| |||||||||||||||| || ||||||||| Sbjct: 83 gagaaatcatcaacgtcaagttggtggagagtggagagaaggag 126
>dbj|AK175619.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-10-C07 Length = 655 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 179 gagacatcatcaacctcaagttggtggagagcggcgagaaggag 222 |||| ||||||||| |||||||||||||||| || ||||||||| Sbjct: 182 gagaaatcatcaacgtcaagttggtggagagtggagagaaggag 225
>emb|BX825849.1|CNS0A6G1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL67ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 568 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 179 gagacatcatcaacctcaagttggtggagagcggcgagaaggag 222 |||| ||||||||| |||||||||||||||| || ||||||||| Sbjct: 172 gagaaatcatcaacgtcaagttggtggagagtggagagaaggag 215
>gb|AC189738.3| Pan troglodytes BAC clone CH251-509E4 from chromosome 7, complete sequence Length = 201468 Score = 48.1 bits (24), Expect = 0.045 Identities = 24/24 (100%) Strand = Plus / Plus Query: 10 cagaggagaggaggaggagacagg 33 |||||||||||||||||||||||| Sbjct: 110578 cagaggagaggaggaggagacagg 110601
>ref|XM_521309.2| PREDICTED: Pan troglodytes similar to MAGE-X2 (MAGEA4), mRNA Length = 1790 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 423 cagaggagaggaggaggagacag 401
>gb|DQ891685.1| Synthetic construct Homo sapiens clone FLH179268.01X; RZPDo839E08130D MAGEA4 mRNA, complete sequence Length = 954 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 138 cagaggagaggaggaggagacag 116
>emb|CT954340.2| Pan troglodytes chromosome X clone CH251-527M09 map Xq28, complete sequence Length = 173519 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 134591 cagaggagaggaggaggagacag 134569
>gb|AY954624.1| Homo sapiens melanoma antigen A 4 (MAGEA4) mRNA, complete cds Length = 1501 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 229 cagaggagaggaggaggagacag 207
>gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OABb-433A1, complete sequence Length = 161653 Score = 46.1 bits (23), Expect = 0.18 Identities = 26/27 (96%) Strand = Plus / Minus Query: 170 cttctctcggagacatcatcaacctca 196 |||||||||||||||| |||||||||| Sbjct: 6874 cttctctcggagacattatcaacctca 6848
>gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complete sequence Length = 195917 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 162824 cagaggagaggaggaggagacag 162802
>ref|NM_001011548.1| Homo sapiens melanoma antigen family A, 4 (MAGEA4), transcript variant 1, mRNA Length = 1724 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 356 cagaggagaggaggaggagacag 334
>ref|NM_002362.4| Homo sapiens melanoma antigen family A, 4 (MAGEA4), transcript variant 2, mRNA Length = 1727 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 359 cagaggagaggaggaggagacag 337
>ref|NM_001011549.1| Homo sapiens melanoma antigen family A, 4 (MAGEA4), transcript variant 3, mRNA Length = 1721 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 353 cagaggagaggaggaggagacag 331
>ref|NM_001011550.1| Homo sapiens melanoma antigen family A, 4 (MAGEA4), transcript variant 4, mRNA Length = 1712 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 344 cagaggagaggaggaggagacag 322
>gb|BC096712.1| Homo sapiens melanoma antigen family A, 4, mRNA (cDNA clone IMAGE:40000126), partial cds Length = 707 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 295 cagaggagaggaggaggagacag 273
>emb|CR623041.1| full-length cDNA clone CS0DI048YI01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1738 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 400 cagaggagaggaggaggagacag 378
>emb|CR622709.1| full-length cDNA clone CS0DI078YJ13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1671 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 321 cagaggagaggaggaggagacag 299
>gb|AF274855.3| Homo sapiens chromosome X clone RP11-366F6 map q28, complete sequence Length = 200395 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 120140 cagaggagaggaggaggagacag 120118
>gb|U82696.2| Homo sapiens chromosome X clone ICRFXc104-F064, ICRFXc104-G0799, Qc-14E2, Qc-13D8, Qc-7G11, ICRFXc104-E0681, Qc-11C8, Qc-9A9 map q28, complete sequence Length = 161664 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 63986 cagaggagaggaggaggagacag 63964
>dbj|D32077.1|HUMMAGEC Homo sapiens mRNA for MAGE-41 protein, complete cds Length = 1022 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 203 cagaggagaggaggaggagacag 181
>dbj|D32075.1|HUMMAGEA Homo sapiens mRNA for MAGE-4 protein, complete cds Length = 1022 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 203 cagaggagaggaggaggagacag 181
>gb|BC017723.1| Homo sapiens melanoma antigen family A, 4, mRNA (cDNA clone MGC:21336 IMAGE:4394783), complete cds Length = 1742 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 356 cagaggagaggaggaggagacag 334
>gb|U10688.1|HSU10688 Human MAGE-4b antigen (MAGE4b) gene, complete cds Length = 4895 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 3126 cagaggagaggaggaggagacag 3104
>gb|U10687.1|HSU10687 Human MAGE-4a antigen (MAGE4a) gene, complete cds Length = 11495 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 9726 cagaggagaggaggaggagacag 9704
>gb|U10340.1|HSU10340 Human MAGE-X2 mRNA, complete cds Length = 954 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 cagaggagaggaggaggagacag 32 ||||||||||||||||||||||| Sbjct: 138 cagaggagaggaggaggagacag 116
>emb|BX826233.1|CNS0A6GX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 630 Score = 44.1 bits (22), Expect = 0.70 Identities = 28/30 (93%) Strand = Plus / Plus Query: 179 gagacatcatcaacctcaagttggtggaga 208 |||| ||||||||| ||||||||||||||| Sbjct: 161 gagaaatcatcaacgtcaagttggtggaga 190
>emb|BX004812.8| Zebrafish DNA sequence from clone CH211-201M7 in linkage group 25, complete sequence Length = 189554 Score = 44.1 bits (22), Expect = 0.70 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 agaggagaggaggaggagacag 32 |||||||||||||||||||||| Sbjct: 4556 agaggagaggaggaggagacag 4577
>emb|CT573284.1| Platypus DNA sequence from clone CLM1-349H20, complete sequence Length = 151975 Score = 44.1 bits (22), Expect = 0.70 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 agcagaggagaggaggaggaga 29 |||||||||||||||||||||| Sbjct: 1408 agcagaggagaggaggaggaga 1387
>ref|XR_027186.1| PREDICTED: Gallus gallus similar to myosin 10 (LOC429030), mRNA Length = 8145 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 gaagcagaggagaggaggagg 26 ||||||||||||||||||||| Sbjct: 2398 gaagcagaggagaggaggagg 2418
>emb|CR381548.7| Zebrafish DNA sequence from clone CH211-278L3 in linkage group 23, complete sequence Length = 146355 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 gaggagaggaggaggagacag 32 ||||||||||||||||||||| Sbjct: 98238 gaggagaggaggaggagacag 98218
>gb|AC126429.4| Mus musculus BAC clone RP24-403O23 from chromosome 6, complete sequence Length = 152532 Score = 42.1 bits (21), Expect = 2.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 16 agaggaggaggagacaggattcagg 40 |||||||||||||||||||| |||| Sbjct: 130920 agaggaggaggagacaggatacagg 130896
>gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosome 6, complete sequence Length = 138242 Score = 42.1 bits (21), Expect = 2.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 agaggaggaggagacaggattcagg 40 |||||||||||||||||||| |||| Sbjct: 132520 agaggaggaggagacaggatacagg 132544
>gb|AC110378.4| Mus musculus BAC clone RP24-193H8 from 6, complete sequence Length = 166527 Score = 42.1 bits (21), Expect = 2.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 16 agaggaggaggagacaggattcagg 40 |||||||||||||||||||| |||| Sbjct: 57987 agaggaggaggagacaggatacagg 57963
>gb|AC117639.7| Mus musculus chromosome 10, clone RP23-225H6, complete sequence Length = 217522 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gcagaggagaggaggaggaga 29 ||||||||||||||||||||| Sbjct: 25972 gcagaggagaggaggaggaga 25992
>gb|AC106739.5| Homo sapiens chromosome 16 clone CTD-3203P2, complete sequence Length = 150762 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 610 ctgtaccattaccacactgta 630 ||||||||||||||||||||| Sbjct: 100637 ctgtaccattaccacactgta 100657
>ref|NM_001030446.1| Xenopus tropicalis MGC108395 protein (MGC108395), mRNA gb|BC091077.1| Xenopus tropicalis MGC108395 protein, mRNA (cDNA clone MGC:108395 IMAGE:7024191), complete cds Length = 1495 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 gacacggtgaaggcagagctg 402 ||||||||||||||||||||| Sbjct: 302 gacacggtgaaggcagagctg 322
>gb|AC157582.3| Mus musculus chromosome 15, clone RP24-316F24, complete sequence Length = 207168 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 aaggaaaaagggaagaaataa 323 ||||||||||||||||||||| Sbjct: 123851 aaggaaaaagggaagaaataa 123871
>gb|AC153924.8| Mus musculus 10 BAC RP23-74P12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214001 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 gggaagaaataatgtaacatt 332 ||||||||||||||||||||| Sbjct: 120086 gggaagaaataatgtaacatt 120066
>gb|AC055715.13|AC055715 Homo sapiens 12 BAC RP11-593B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86800 Score = 42.1 bits (21), Expect = 2.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 11 agaggagaggaggaggagacaggattcag 39 ||||||||||| |||||||||||| |||| Sbjct: 67420 agaggagaggaagaggagacaggagtcag 67392
>gb|AC109449.4| Homo sapiens chromosome 16 clone RP11-147I4, complete sequence Length = 139979 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 610 ctgtaccattaccacactgta 630 ||||||||||||||||||||| Sbjct: 111903 ctgtaccattaccacactgta 111883
>gb|AY826901.1| Heterocapsa triquetra clone HTLHC3471 chloroplast light harvesting complex protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1087 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 acggtgaaggcagagctgctg 405 ||||||||||||||||||||| Sbjct: 125 acggtgaaggcagagctgctg 105
>dbj|BS000099.1| Pan troglodytes chromosome 22 clone:PTB-047E13, map 22, complete sequences Length = 231583 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 cattagatgatcttattcatg 349 ||||||||||||||||||||| Sbjct: 84427 cattagatgatcttattcatg 84447
>dbj|AP001692.1| Homo sapiens genomic DNA, chromosome 21q, section 36/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 cattagatgatcttattcatg 349 ||||||||||||||||||||| Sbjct: 15622 cattagatgatcttattcatg 15642
>dbj|AP001775.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-700F16, complete sequence Length = 117345 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 tgttattactccaaaaggaag 368 ||||||||||||||||||||| Sbjct: 107845 tgttattactccaaaaggaag 107825
>dbj|AP000146.2| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-T145, complete sequence Length = 77728 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 cattagatgatcttattcatg 349 ||||||||||||||||||||| Sbjct: 22182 cattagatgatcttattcatg 22202
>gb|AC124114.10| Mus musculus chromosome 15, clone RP24-362H23, complete sequence Length = 134815 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 aaggaaaaagggaagaaataa 323 ||||||||||||||||||||| Sbjct: 1763 aaggaaaaagggaagaaataa 1783
>emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chromosome 4, complete sequence Length = 166167 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 agaggagaggaggaggagaca 31 ||||||||||||||||||||| Sbjct: 92849 agaggagaggaggaggagaca 92869
>dbj|AP000859.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-17I22, complete sequences Length = 118455 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 tgttattactccaaaaggaag 368 ||||||||||||||||||||| Sbjct: 9579 tgttattactccaaaaggaag 9559
>dbj|AP000231.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone:T145, complete sequence Length = 77728 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 cattagatgatcttattcatg 349 ||||||||||||||||||||| Sbjct: 55547 cattagatgatcttattcatg 55527 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 116,477,091 Number of extensions: 7210937 Number of successful extensions: 195613 Number of sequences better than 10.0: 58 Number of HSP's gapped: 195613 Number of HSP's successfully gapped: 67 Length of query: 734 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 712 Effective length of database: 18,508,616,841 Effective search space: 13178135190792 Effective search space used: 13178135190792 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)