ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62g17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831497.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI210I10, full insert sequence Length = 1997 Score = 498 bits (251), Expect = e-137 Identities = 398/447 (89%) Strand = Plus / Plus Query: 162 atggcttcagaaatggtgaaggcggcgacgagcgagaagctcaaggagatggactgggcc 221 ||||| || |||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 239 atggcctcggaaatggttaaggcggcgacgagtgagaagctcaaggagatggattgggcc 298 Query: 222 aagaacatcgaaatctgcgagctcgtcgctcaggatccggggaaagcgaaggatgtgatc 281 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 299 aagaacatcgaaatctgcgagctcgtcgctcaggatcctgggaaagcgaaggatgtgatc 358 Query: 282 aaatccataaagaagtgcataggaagcaggagcaaggatgctcaactttatgctgtcatg 341 || | |||||||||| |||| |||||||||||| | |||||||||||||||| ||| Sbjct: 359 aagccgataaagaagtatttaggtagcaggagcaagaacactcaactttatgctgttatg 418 Query: 342 ctgttggagatgctcatgaataactgtggagagcctatccacaagcaggtcattgataat 401 ||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 419 ctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataac 478 Query: 402 gggcttcttccgatacttatcaaaatagtgaagaaaaagacggaattgccagttcgggaa 461 || ||||| ||||||||| | || || |||||||||||||| ||||| |||||||| ||| Sbjct: 479 ggtcttctcccgatacttgtgaagattgtgaagaaaaagacagaattaccagttcgtgaa 538 Query: 462 aagatatttcttctgttagatgcgacccaaacatcccttggtggagctaaaggaaagttc 521 || ||||||||| || | |||||||||||||||||||||||||||| |||||| || ||| Sbjct: 539 aaaatatttcttttgctggatgcgacccaaacatcccttggtggagttaaagggaaattc 598 Query: 522 ccccagtactatgaggcatattatgaattagtgtctgctggtgtgaagttttcgaatcgt 581 || |||||||||| |||||||||||| || ||||||||||| || ||||||||||||| Sbjct: 599 cctcagtactatggggcatattatgagttggtgtctgctggcgttcagttttcgaatcgc 658 Query: 582 ccaaatgttgtcattacacaagtacaa 608 ||||||||||| ||||||||| |||| Sbjct: 659 ccaaatgttgttgttacacaagcacaa 685 Score = 301 bits (152), Expect = 4e-78 Identities = 372/444 (83%), Gaps = 6/444 (1%) Strand = Plus / Plus Query: 692 gcagcctgtttctgacacgagtataattcggaaagcatctagtgtcatggaagttctaag 751 |||||||||||| || | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 775 gcagcctgtttccgagtcaagtataattcggaaagcttctagtgtcatggaagttctaaa 834 Query: 752 ggatgtaataaattccatggatcctagacatcctgagggagcaacagatgagtttgtgtt 811 ||| || | |||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 835 ggacgtgcttgattcgatggatcctagacaccctgagggagcaactgatgagtttgtgtt 894 Query: 812 ggatcttgtagagcagtgtactttccaaaagcaacgaataatgcatctggttatgacatc 871 ||||||||| ||||| || || || ||||| || |||||||||||||| ||||||||||| Sbjct: 895 ggatcttgtggagcaatgcacatttcaaaaacagcgaataatgcatctagttatgacatc 954 Query: 872 aagggatgaagtggtggtgtcgcaatgtatagagctgaatgaagagctgcagaaggttct 931 |||||||||||||||||| || ||| ||||| ||||| |||||||| || ||||| || Sbjct: 955 aagggatgaagtggtggtatcacaagcaatagaactgaacgaagagcttcacaaggtcct 1014 Query: 932 tgtacggcatgatacattgctttcagttcacccaactacgacgacagtaccatctaatct 991 ||||||||||||| |||||||||||||| |||||| || |||||| | |||| ||| Sbjct: 1015 tgtacggcatgatgtgttgctttcagttcagccaact---acaacagtagcttctactct 1071 Query: 992 caaggaggacgaggaggaagaagatgcagaaagtctatatcggagactgcggaaggggaa 1051 ||||||| || |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 1072 caaggag---gaagaggaagaagatgccgaaagcctttaccggaggcttcgaaagggaaa 1128 Query: 1052 ggctttatcgcaagaccacctagacgagtccatgccatcgtttcgatccatacccgagga 1111 || |||||| |||| | ||| || ||||| ||||| |||||||| ||||| || || Sbjct: 1129 agcattatcggaagattatacagatgactccataccatcatttcgatctatacctgaaga 1188 Query: 1112 gaagatgcgccgcccgctcaccat 1135 |||||||||||||| |||||||| Sbjct: 1189 caagatgcgccgcccactcaccat 1212 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Plus Query: 1222 tgattccgccgccacccgccaagcacgccgagagggagaggttcttccgcgagaagagca 1281 ||||||| || || || |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1290 tgattccaccaccgcctgccaagcacgccgagagggagaggttcttccgggagaagagca 1349 Query: 1282 tgga 1285 |||| Sbjct: 1350 tgga 1353 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1334 cagccgggacggcagcagctcgtgcagtggcagcacggattacggcgactgagg 1387 ||||||||||||||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 1393 cagccgggacggcagtagctcgtgtagcggcagcacagattatggagactgagg 1446
>ref|NM_001067342.1| Oryza sativa (japonica cultivar-group) Os08g0109000 (Os08g0109000) mRNA, complete cds Length = 2218 Score = 498 bits (251), Expect = e-137 Identities = 398/447 (89%) Strand = Plus / Plus Query: 162 atggcttcagaaatggtgaaggcggcgacgagcgagaagctcaaggagatggactgggcc 221 ||||| || |||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 242 atggcctcggaaatggttaaggcggcgacgagtgagaagctcaaggagatggattgggcc 301 Query: 222 aagaacatcgaaatctgcgagctcgtcgctcaggatccggggaaagcgaaggatgtgatc 281 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 302 aagaacatcgaaatctgcgagctcgtcgctcaggatcctgggaaagcgaaggatgtgatc 361 Query: 282 aaatccataaagaagtgcataggaagcaggagcaaggatgctcaactttatgctgtcatg 341 || | |||||||||| |||| |||||||||||| | |||||||||||||||| ||| Sbjct: 362 aagccgataaagaagtatttaggtagcaggagcaagaacactcaactttatgctgttatg 421 Query: 342 ctgttggagatgctcatgaataactgtggagagcctatccacaagcaggtcattgataat 401 ||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 422 ctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataac 481 Query: 402 gggcttcttccgatacttatcaaaatagtgaagaaaaagacggaattgccagttcgggaa 461 || ||||| ||||||||| | || || |||||||||||||| ||||| |||||||| ||| Sbjct: 482 ggtcttctcccgatacttgtgaagattgtgaagaaaaagacagaattaccagttcgtgaa 541 Query: 462 aagatatttcttctgttagatgcgacccaaacatcccttggtggagctaaaggaaagttc 521 || ||||||||| || | |||||||||||||||||||||||||||| |||||| || ||| Sbjct: 542 aaaatatttcttttgctggatgcgacccaaacatcccttggtggagttaaagggaaattc 601 Query: 522 ccccagtactatgaggcatattatgaattagtgtctgctggtgtgaagttttcgaatcgt 581 || |||||||||| |||||||||||| || ||||||||||| || ||||||||||||| Sbjct: 602 cctcagtactatggggcatattatgagttggtgtctgctggcgttcagttttcgaatcgc 661 Query: 582 ccaaatgttgtcattacacaagtacaa 608 ||||||||||| ||||||||| |||| Sbjct: 662 ccaaatgttgttgttacacaagcacaa 688 Score = 309 bits (156), Expect = 2e-80 Identities = 373/444 (84%), Gaps = 6/444 (1%) Strand = Plus / Plus Query: 692 gcagcctgtttctgacacgagtataattcggaaagcatctagtgtcatggaagttctaag 751 |||||||||||| || | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 778 gcagcctgtttccgagtcaagtataattcggaaagcttctagtgtcatggaagttctaaa 837 Query: 752 ggatgtaataaattccatggatcctagacatcctgagggagcaacagatgagtttgtgtt 811 ||| || | |||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 838 ggacgtgcttgattcgatggatcctagacaccctgagggagcaactgatgagtttgtgtt 897 Query: 812 ggatcttgtagagcagtgtactttccaaaagcaacgaataatgcatctggttatgacatc 871 ||||||||| ||||| || || || ||||| || |||||||||||||| ||||||||||| Sbjct: 898 ggatcttgtggagcaatgcacatttcaaaaacagcgaataatgcatctagttatgacatc 957 Query: 872 aagggatgaagtggtggtgtcgcaatgtatagagctgaatgaagagctgcagaaggttct 931 |||||||||||||||||| || ||| ||||| ||||| |||||||| || ||||| || Sbjct: 958 aagggatgaagtggtggtatcacaagcaatagaactgaacgaagagcttcacaaggtcct 1017 Query: 932 tgtacggcatgatacattgctttcagttcacccaactacgacgacagtaccatctaatct 991 ||||||||||||| | |||||||||||||| |||||| || |||||| | |||| ||| Sbjct: 1018 tgtacggcatgatgcgttgctttcagttcagccaact---acaacagtagcttctactct 1074 Query: 992 caaggaggacgaggaggaagaagatgcagaaagtctatatcggagactgcggaaggggaa 1051 ||||||| || |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 1075 caaggag---gaagaggaagaagatgccgaaagcctttaccggaggcttcgaaagggaaa 1131 Query: 1052 ggctttatcgcaagaccacctagacgagtccatgccatcgtttcgatccatacccgagga 1111 || |||||| |||| | ||| || ||||| ||||| |||||||| ||||| || || Sbjct: 1132 agcattatcggaagattatacagatgactccataccatcatttcgatctatacctgaaga 1191 Query: 1112 gaagatgcgccgcccgctcaccat 1135 |||||||||||||| |||||||| Sbjct: 1192 caagatgcgccgcccactcaccat 1215 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1222 tgattccgccgccacccgccaagcacgccgagagggagaggttcttccgcgagaagagca 1281 ||||||| || || || ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1293 tgattccaccaccgcctgccaagcacgccgagagggagaggttctttcgggagaagagca 1352 Query: 1282 tgga 1285 |||| Sbjct: 1353 tgga 1356 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1334 cagccgggacggcagcagctcgtgcagtggcagcacggattacggcgactgagg 1387 ||||||||||||||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 1396 cagccgggacggcagtagctcgtgtagcggcagcacagattatggagactgagg 1449
>dbj|AK067345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105N04, full insert sequence Length = 1706 Score = 498 bits (251), Expect = e-137 Identities = 398/447 (89%) Strand = Plus / Plus Query: 162 atggcttcagaaatggtgaaggcggcgacgagcgagaagctcaaggagatggactgggcc 221 ||||| || |||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 241 atggcctcggaaatggttaaggcggcgacgagtgagaagctcaaggagatggattgggcc 300 Query: 222 aagaacatcgaaatctgcgagctcgtcgctcaggatccggggaaagcgaaggatgtgatc 281 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 301 aagaacatcgaaatctgcgagctcgtcgctcaggatcctgggaaagcgaaggatgtgatc 360 Query: 282 aaatccataaagaagtgcataggaagcaggagcaaggatgctcaactttatgctgtcatg 341 || | |||||||||| |||| |||||||||||| | |||||||||||||||| ||| Sbjct: 361 aagccgataaagaagtatttaggtagcaggagcaagaacactcaactttatgctgttatg 420 Query: 342 ctgttggagatgctcatgaataactgtggagagcctatccacaagcaggtcattgataat 401 ||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 421 ctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataac 480 Query: 402 gggcttcttccgatacttatcaaaatagtgaagaaaaagacggaattgccagttcgggaa 461 || ||||| ||||||||| | || || |||||||||||||| ||||| |||||||| ||| Sbjct: 481 ggtcttctcccgatacttgtgaagattgtgaagaaaaagacagaattaccagttcgtgaa 540 Query: 462 aagatatttcttctgttagatgcgacccaaacatcccttggtggagctaaaggaaagttc 521 || ||||||||| || | |||||||||||||||||||||||||||| |||||| || ||| Sbjct: 541 aaaatatttcttttgctggatgcgacccaaacatcccttggtggagttaaagggaaattc 600 Query: 522 ccccagtactatgaggcatattatgaattagtgtctgctggtgtgaagttttcgaatcgt 581 || |||||||||| |||||||||||| || ||||||||||| || ||||||||||||| Sbjct: 601 cctcagtactatggggcatattatgagttggtgtctgctggcgttcagttttcgaatcgc 660 Query: 582 ccaaatgttgtcattacacaagtacaa 608 ||||||||||| ||||||||| |||| Sbjct: 661 ccaaatgttgttgttacacaagcacaa 687 Score = 293 bits (148), Expect = 1e-75 Identities = 372/444 (83%), Gaps = 7/444 (1%) Strand = Plus / Plus Query: 692 gcagcctgtttctgacacgagtataattcggaaagcatctagtgtcatggaagttctaag 751 |||||||||||| || | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 777 gcagcctgtttccgagtcaagtataattcggaaagcttctagtgtcatggaagttctaaa 836 Query: 752 ggatgtaataaattccatggatcctagacatcctgagggagcaacagatgagtttgtgtt 811 ||| || | |||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 837 ggacgtgcttgattcgatggatcctagacaccctgagggagcaactgatgagtttgtgtt 896 Query: 812 ggatcttgtagagcagtgtactttccaaaagcaacgaataatgcatctggttatgacatc 871 ||||||||| ||||| || || || ||||| || |||||||||||||| ||||||||||| Sbjct: 897 ggatcttgtggagcaatgcacatttcaaaaacagcgaataatgcatctagttatgacatc 956 Query: 872 aagggatgaagtggtggtgtcgcaatgtatagagctgaatgaagagctgcagaaggttct 931 |||||||||||||||||| || ||| ||||| ||||| | |||||| || ||||| || Sbjct: 957 aagggatgaagtggtggtatcacaagcaatagaactgaacg-agagcttcacaaggtcct 1015 Query: 932 tgtacggcatgatacattgctttcagttcacccaactacgacgacagtaccatctaatct 991 ||||||||||||| | |||||||||||||| |||||| || |||||| | |||| ||| Sbjct: 1016 tgtacggcatgatgcgttgctttcagttcagccaact---acaacagtagcttctactct 1072 Query: 992 caaggaggacgaggaggaagaagatgcagaaagtctatatcggagactgcggaaggggaa 1051 ||||||| || |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 1073 caaggag---gaagaggaagaagatgccgaaagcctttaccggaggcttcgaaagggaaa 1129 Query: 1052 ggctttatcgcaagaccacctagacgagtccatgccatcgtttcgatccatacccgagga 1111 || |||||| |||| | ||| || ||||| ||||| |||||||| ||||| || || Sbjct: 1130 agcattatcggaagattatacagatgactccataccatcatttcgatctatacctgaaga 1189 Query: 1112 gaagatgcgccgcccgctcaccat 1135 |||||||||||||| |||||||| Sbjct: 1190 caagatgcgccgcccactcaccat 1213 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1222 tgattccgccgccacccgccaagcacgccgagagggagaggttcttccgcgagaagagca 1281 ||||||| || || || ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1291 tgattccaccaccgcctgccaagcacgccgagagggagaggttctttcgggagaagagca 1350 Query: 1282 tgga 1285 |||| Sbjct: 1351 tgga 1354 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1334 cagccgggacggcagcagctcgtgcagtggcagcacggattacggcgactgagg 1387 ||||||||||||||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 1394 cagccgggacggcagtagctcgtgtagcggcagcacagattatggagactgagg 1447
>dbj|AK107316.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-E01, full insert sequence Length = 2219 Score = 490 bits (247), Expect = e-135 Identities = 397/447 (88%) Strand = Plus / Plus Query: 162 atggcttcagaaatggtgaaggcggcgacgagcgagaagctcaaggagatggactgggcc 221 ||||| || |||||| | |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 243 atggcctcggaaatgtttaaggcggcgacgagtgagaagctcaaggagatggattgggcc 302 Query: 222 aagaacatcgaaatctgcgagctcgtcgctcaggatccggggaaagcgaaggatgtgatc 281 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 303 aagaacatcgaaatctgcgagctcgtcgctcaggatcctgggaaagcgaaggatgtgatc 362 Query: 282 aaatccataaagaagtgcataggaagcaggagcaaggatgctcaactttatgctgtcatg 341 || | |||||||||| |||| |||||||||||| | |||||||||||||||| ||| Sbjct: 363 aagccgataaagaagtatttaggtagcaggagcaagaacactcaactttatgctgttatg 422 Query: 342 ctgttggagatgctcatgaataactgtggagagcctatccacaagcaggtcattgataat 401 ||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 423 ctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataac 482 Query: 402 gggcttcttccgatacttatcaaaatagtgaagaaaaagacggaattgccagttcgggaa 461 || ||||| ||||||||| | || || |||||||||||||| ||||| |||||||| ||| Sbjct: 483 ggtcttctcccgatacttgtgaagattgtgaagaaaaagacagaattaccagttcgtgaa 542 Query: 462 aagatatttcttctgttagatgcgacccaaacatcccttggtggagctaaaggaaagttc 521 || ||||||||| || | |||||||||||||||||||||||||||| |||||| || ||| Sbjct: 543 aaaatatttcttttgctggatgcgacccaaacatcccttggtggagttaaagggaaattc 602 Query: 522 ccccagtactatgaggcatattatgaattagtgtctgctggtgtgaagttttcgaatcgt 581 || |||||||||| |||||||||||| || ||||||||||| || ||||||||||||| Sbjct: 603 cctcagtactatggggcatattatgagttggtgtctgctggcgttcagttttcgaatcgc 662 Query: 582 ccaaatgttgtcattacacaagtacaa 608 ||||||||||| ||||||||| |||| Sbjct: 663 ccaaatgttgttgttacacaagcacaa 689 Score = 301 bits (152), Expect = 4e-78 Identities = 372/444 (83%), Gaps = 6/444 (1%) Strand = Plus / Plus Query: 692 gcagcctgtttctgacacgagtataattcggaaagcatctagtgtcatggaagttctaag 751 |||||||||||| || | ||||| ||||||||||| |||||||||||||||||||||| Sbjct: 779 gcagcctgtttccgagtcaagtatgattcggaaagcttctagtgtcatggaagttctaaa 838 Query: 752 ggatgtaataaattccatggatcctagacatcctgagggagcaacagatgagtttgtgtt 811 ||| || | |||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 839 ggacgtgcttgattcgatggatcctagacaccctgagggagcaactgatgagtttgtgtt 898 Query: 812 ggatcttgtagagcagtgtactttccaaaagcaacgaataatgcatctggttatgacatc 871 ||||||||| ||||| || || || ||||| || |||||||||||||| ||||||||||| Sbjct: 899 ggatcttgtggagcaatgcacatttcaaaaacagcgaataatgcatctagttatgacatc 958 Query: 872 aagggatgaagtggtggtgtcgcaatgtatagagctgaatgaagagctgcagaaggttct 931 |||||||||||||||||| || ||| ||||| ||||| |||||||| || ||||| || Sbjct: 959 aagggatgaagtggtggtatcacaagcaatagaactgaacgaagagcttcacaaggtcct 1018 Query: 932 tgtacggcatgatacattgctttcagttcacccaactacgacgacagtaccatctaatct 991 ||||||||||||| | |||||||||||||| |||||| || |||||| | |||| ||| Sbjct: 1019 tgtacggcatgatgcgttgctttcagttcagccaact---acaacagtagcttctactct 1075 Query: 992 caaggaggacgaggaggaagaagatgcagaaagtctatatcggagactgcggaaggggaa 1051 ||||||| || |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 1076 caaggag---gaagaggaagaagatgccgaaagcctttaccggaggcttcgaaagggaaa 1132 Query: 1052 ggctttatcgcaagaccacctagacgagtccatgccatcgtttcgatccatacccgagga 1111 || |||||| |||| | ||| || ||||| ||||| |||||||| ||||| || || Sbjct: 1133 agcattatcggaagattatacagatgactccataccatcatttcgatctatacctgaaga 1192 Query: 1112 gaagatgcgccgcccgctcaccat 1135 |||||||||||||| |||||||| Sbjct: 1193 caagatgcgccgcccactcaccat 1216 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1222 tgattccgccgccacccgccaagcacgccgagagggagaggttcttccgcgagaagagca 1281 ||||||| || || || ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1294 tgattccaccaccgcctgccaagcacgccgagagggagaggttctttcgggagaagagca 1353 Query: 1282 tgga 1285 |||| Sbjct: 1354 tgga 1357 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1334 cagccgggacggcagcagctcgtgcagtggcagcacggattacggcgactgagg 1387 ||||||||||||||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 1397 cagccgggacggcagtagctcgtgtagcggcagcacagattatggagactgagg 1450
>gb|AY105113.1| Zea mays PCO104183 mRNA sequence Length = 727 Score = 246 bits (124), Expect = 2e-61 Identities = 303/362 (83%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 693 cagcctgtttctgacacgagtataattcggaaagcatctagtgtcatggaagttctaagg 752 ||||||||| |||| | |||||| | | |||||| ||||||||||||||||| | ||| Sbjct: 316 cagcctgttcctgatgcaagtatagtccagaaagcctctagtgtcatggaagtattgagg 375 Query: 753 gatgtaataaattccatggatcctagacatcctgagggagcaacagatgagtttgtgttg 812 ||||| | ||||| ||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 376 gatgtgcttaattctatggatcctaggcaccctgagggagcaacggatgaatttgtgttg 435 Query: 813 gatcttgtagagcagtgtactttccaaaagcaacgaataatgcatctggttatgacatca 872 |||||||| ||||| ||||| || || ||||||||||||||||| || |||||||||||| Sbjct: 436 gatcttgtcgagcaatgtacgtttcagaagcaacgaataatgcaccttgttatgacatca 495 Query: 873 agggatgaagtggtggtgtcgcaatgtatagagctgaatgaagagctgcagaaggttctt 932 ||||||||| |||| || ||| ||||||||| ||||||||||| || |||||||| Sbjct: 496 agggatgaaacactggtatcacaagctatagagctaaatgaagagctacataaggttctc 555 Query: 933 gtacggcatgatacattgctttcagttcacccaactacgacgacagtaccatctaatctc 992 || |||||||| | |||||||||||||| | | || || ||||| | |||||| | Sbjct: 556 gtccggcatgacgcgttgctttcagttcatc---cgacaacagcagtagcttctaatata 612 Query: 993 aaggaggacgaggaggaagaagatgcagaaagtctatatcggagactgcggaaggggaag 1052 ||||| || ||||||||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 613 aaggaagaagaggaggaagaggatgctgaaagtctctatcggagactgcggaaggggaag 672 Query: 1053 gc 1054 || Sbjct: 673 gc 674 Score = 240 bits (121), Expect = 1e-59 Identities = 184/205 (89%) Strand = Plus / Plus Query: 386 gcaggtcattgataatgggcttcttccgatacttatcaaaatagtgaagaaaaagacgga 445 |||||||||||||||||| |||||||| |||||| | || |||||||||||||||||||| Sbjct: 9 gcaggtcattgataatggccttcttccaatacttgtgaagatagtgaagaaaaagacgga 68 Query: 446 attgccagttcgggaaaagatatttcttctgttagatgcgacccaaacatcccttggtgg 505 || |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||| Sbjct: 69 tttaccagttcgagaaaaaatatttcttctgttagatgcaacacaaacatcccttggtgg 128 Query: 506 agctaaaggaaagttcccccagtactatgaggcatattatgaattagtgtctgctggtgt 565 |||||||| || |||||| ||||||||||||||||| ||||| || |||||||||||||| Sbjct: 129 agctaaagcaaggttccctcagtactatgaggcatactatgagttggtgtctgctggtgt 188 Query: 566 gaagttttcgaatcgtccaaatgtt 590 | | ||||| ||||| ||||||||| Sbjct: 189 gcaattttcaaatcggccaaatgtt 213
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 155 bits (78), Expect = 6e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 162 atggcttcagaaatggtgaaggcggcgacgagcgagaagctcaaggagatggactgggcc 221 ||||| || |||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 439640 atggcctcggaaatggttaaggcggcgacgagtgagaagctcaaggagatggattgggcc 439699 Query: 222 aagaacatcgaaatctgcgagctcgtcgctcaggatcc 259 |||||||||||||||||||||||||||||||||||||| Sbjct: 439700 aagaacatcgaaatctgcgagctcgtcgctcaggatcc 439737 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 439 agacggaattgccagttcgggaaaagatatttcttctgttagatgcgacccaaacatccc 498 |||| ||||| |||||||| ||||| ||||||||| || | ||||||||||||||||||| Sbjct: 440765 agacagaattaccagttcgtgaaaaaatatttcttttgctggatgcgacccaaacatccc 440824 Query: 499 ttggtggagctaaaggaaagttcccccagtactatgaggcatattatga 547 ||||||||| |||||| || ||||| |||||||||| |||||||||||| Sbjct: 440825 ttggtggagttaaagggaaattccctcagtactatggggcatattatga 440873 Score = 111 bits (56), Expect = 8e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 341 gctgttggagatgctcatgaataactgtggagagcctatccacaagcaggtcattgataa 400 |||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 440585 gctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataa 440644 Query: 401 tgggcttcttccgatacttatcaaaatagtgaagaaaaag 440 || ||||| ||||||||| | || || |||||||||||| Sbjct: 440645 cggtcttctcccgatacttgtgaagattgtgaagaaaaag 440684 Score = 105 bits (53), Expect = 5e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 787 agggagcaacagatgagtttgtgttggatcttgtagagcagtgtactttccaaaagcaac 846 |||||||||| ||||||||||||||||||||||| ||||| || || || ||||| || | Sbjct: 442500 agggagcaactgatgagtttgtgttggatcttgtggagcaatgcacatttcaaaaacagc 442559 Query: 847 gaataatgcatctggttatgacatcaagg 875 ||||||||||||| ||||||||||||||| Sbjct: 442560 gaataatgcatctagttatgacatcaagg 442588 Score = 99.6 bits (50), Expect = 3e-17 Identities = 118/140 (84%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 873 agggatgaagtggtggtgtcgcaatgtatagagctgaatgaagagctgcagaaggttctt 932 ||||||||||||||||| || ||| ||||| ||||| |||||||| || ||||| ||| Sbjct: 442704 agggatgaagtggtggtatcacaagcaatagaactgaacgaagagcttcacaaggtcctt 442763 Query: 933 gtacggcatgatacattgctttcagttcacccaactacgacgacagtaccatctaatctc 992 |||||||||||| | |||||||||||||| |||||| || |||||| | |||| |||| Sbjct: 442764 gtacggcatgatgcgttgctttcagttcagccaact---acaacagtagcttctactctc 442820 Query: 993 aaggaggacgaggaggaaga 1012 |||||||| ||||| ||||| Sbjct: 442821 aaggaggaagaggaagaaga 442840 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 711 agtataattcggaaagcatctagtgtcatggaagttctaagggatgtaataaattccatg 770 ||||||||||||||||| |||||||||||||||||||||| ||| || | |||| ||| Sbjct: 442235 agtataattcggaaagcttctagtgtcatggaagttctaaaggacgtgcttgattcgatg 442294 Query: 771 gatcctagacatcctgagg 789 ||||||||||| ||||||| Sbjct: 442295 gatcctagacaccctgagg 442313 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1222 tgattccgccgccacccgccaagcacgccgagagggagaggttcttccgcgagaagagca 1281 ||||||| || || || ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 443110 tgattccaccaccgcctgccaagcacgccgagagggagaggttctttcgggagaagagca 443169 Query: 1282 tgga 1285 |||| Sbjct: 443170 tgga 443173 Score = 71.9 bits (36), Expect = 7e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 262 ggaaagcgaaggatgtgatcaaatccataaagaagtgcataggaagcaggagcaaggatg 321 |||||||||||||||||||||| | |||||||||| |||| |||||||||||| | Sbjct: 440066 ggaaagcgaaggatgtgatcaagccgataaagaagtatttaggtagcaggagcaagaaca 440125 Query: 322 ctcaactttatgctgt 337 |||||||||||||||| Sbjct: 440126 ctcaactttatgctgt 440141 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1334 cagccgggacggcagcagctcgtgcagtggcagcacggattacggcgactgagg 1387 ||||||||||||||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 443213 cagccgggacggcagtagctcgtgtagcggcagcacagattatggagactgagg 443266 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1080 tccatgccatcgtttcgatccatacccgaggagaagatgcgccgcccgctcaccat 1135 ||||| ||||| |||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 442977 tccataccatcatttcgatctatacctgaagacaagatgcgccgcccactcaccat 443032 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 554 gtctgctggtgtgaagttttcgaatcgtccaaatgttgtcattacacaagtacaa 608 ||||||||| || ||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 441217 gtctgctggcgttcagttttcgaatcgcccaaatgttgttgttacacaagcacaa 441271
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 155 bits (78), Expect = 6e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 162 atggcttcagaaatggtgaaggcggcgacgagcgagaagctcaaggagatggactgggcc 221 ||||| || |||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 29600 atggcctcggaaatggttaaggcggcgacgagtgagaagctcaaggagatggattgggcc 29659 Query: 222 aagaacatcgaaatctgcgagctcgtcgctcaggatcc 259 |||||||||||||||||||||||||||||||||||||| Sbjct: 29660 aagaacatcgaaatctgcgagctcgtcgctcaggatcc 29697 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 439 agacggaattgccagttcgggaaaagatatttcttctgttagatgcgacccaaacatccc 498 |||| ||||| |||||||| ||||| ||||||||| || | ||||||||||||||||||| Sbjct: 30725 agacagaattaccagttcgtgaaaaaatatttcttttgctggatgcgacccaaacatccc 30784 Query: 499 ttggtggagctaaaggaaagttcccccagtactatgaggcatattatga 547 ||||||||| |||||| || ||||| |||||||||| |||||||||||| Sbjct: 30785 ttggtggagttaaagggaaattccctcagtactatggggcatattatga 30833 Score = 111 bits (56), Expect = 8e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 341 gctgttggagatgctcatgaataactgtggagagcctatccacaagcaggtcattgataa 400 |||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 30545 gctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataa 30604 Query: 401 tgggcttcttccgatacttatcaaaatagtgaagaaaaag 440 || ||||| ||||||||| | || || |||||||||||| Sbjct: 30605 cggtcttctcccgatacttgtgaagattgtgaagaaaaag 30644 Score = 105 bits (53), Expect = 5e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 787 agggagcaacagatgagtttgtgttggatcttgtagagcagtgtactttccaaaagcaac 846 |||||||||| ||||||||||||||||||||||| ||||| || || || ||||| || | Sbjct: 32460 agggagcaactgatgagtttgtgttggatcttgtggagcaatgcacatttcaaaaacagc 32519 Query: 847 gaataatgcatctggttatgacatcaagg 875 ||||||||||||| ||||||||||||||| Sbjct: 32520 gaataatgcatctagttatgacatcaagg 32548 Score = 99.6 bits (50), Expect = 3e-17 Identities = 118/140 (84%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 873 agggatgaagtggtggtgtcgcaatgtatagagctgaatgaagagctgcagaaggttctt 932 ||||||||||||||||| || ||| ||||| ||||| |||||||| || ||||| ||| Sbjct: 32664 agggatgaagtggtggtatcacaagcaatagaactgaacgaagagcttcacaaggtcctt 32723 Query: 933 gtacggcatgatacattgctttcagttcacccaactacgacgacagtaccatctaatctc 992 |||||||||||| | |||||||||||||| |||||| || |||||| | |||| |||| Sbjct: 32724 gtacggcatgatgcgttgctttcagttcagccaact---acaacagtagcttctactctc 32780 Query: 993 aaggaggacgaggaggaaga 1012 |||||||| ||||| ||||| Sbjct: 32781 aaggaggaagaggaagaaga 32800 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 711 agtataattcggaaagcatctagtgtcatggaagttctaagggatgtaataaattccatg 770 ||||||||||||||||| |||||||||||||||||||||| ||| || | |||| ||| Sbjct: 32195 agtataattcggaaagcttctagtgtcatggaagttctaaaggacgtgcttgattcgatg 32254 Query: 771 gatcctagacatcctgagg 789 ||||||||||| ||||||| Sbjct: 32255 gatcctagacaccctgagg 32273 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1222 tgattccgccgccacccgccaagcacgccgagagggagaggttcttccgcgagaagagca 1281 ||||||| || || || ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 33070 tgattccaccaccgcctgccaagcacgccgagagggagaggttctttcgggagaagagca 33129 Query: 1282 tgga 1285 |||| Sbjct: 33130 tgga 33133 Score = 71.9 bits (36), Expect = 7e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 262 ggaaagcgaaggatgtgatcaaatccataaagaagtgcataggaagcaggagcaaggatg 321 |||||||||||||||||||||| | |||||||||| |||| |||||||||||| | Sbjct: 30026 ggaaagcgaaggatgtgatcaagccgataaagaagtatttaggtagcaggagcaagaaca 30085 Query: 322 ctcaactttatgctgt 337 |||||||||||||||| Sbjct: 30086 ctcaactttatgctgt 30101 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1334 cagccgggacggcagcagctcgtgcagtggcagcacggattacggcgactgagg 1387 ||||||||||||||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 33173 cagccgggacggcagtagctcgtgtagcggcagcacagattatggagactgagg 33226 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1080 tccatgccatcgtttcgatccatacccgaggagaagatgcgccgcccgctcaccat 1135 ||||| ||||| |||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 32937 tccataccatcatttcgatctatacctgaagacaagatgcgccgcccactcaccat 32992 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 554 gtctgctggtgtgaagttttcgaatcgtccaaatgttgtcattacacaagtacaa 608 ||||||||| || ||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 31177 gtctgctggcgttcagttttcgaatcgcccaaatgttgttgttacacaagcacaa 31231
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 155 bits (78), Expect = 6e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 162 atggcttcagaaatggtgaaggcggcgacgagcgagaagctcaaggagatggactgggcc 221 ||||| || |||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 149154 atggcctcggaaatggttaaggcggcgacgagtgagaagctcaaggagatggattgggcc 149213 Query: 222 aagaacatcgaaatctgcgagctcgtcgctcaggatcc 259 |||||||||||||||||||||||||||||||||||||| Sbjct: 149214 aagaacatcgaaatctgcgagctcgtcgctcaggatcc 149251 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 439 agacggaattgccagttcgggaaaagatatttcttctgttagatgcgacccaaacatccc 498 |||| ||||| |||||||| ||||| ||||||||| || | ||||||||||||||||||| Sbjct: 150279 agacagaattaccagttcgtgaaaaaatatttcttttgctggatgcgacccaaacatccc 150338 Query: 499 ttggtggagctaaaggaaagttcccccagtactatgaggcatattatga 547 ||||||||| |||||| || ||||| |||||||||| |||||||||||| Sbjct: 150339 ttggtggagttaaagggaaattccctcagtactatggggcatattatga 150387 Score = 111 bits (56), Expect = 8e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 341 gctgttggagatgctcatgaataactgtggagagcctatccacaagcaggtcattgataa 400 |||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 150099 gctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataa 150158 Query: 401 tgggcttcttccgatacttatcaaaatagtgaagaaaaag 440 || ||||| ||||||||| | || || |||||||||||| Sbjct: 150159 cggtcttctcccgatacttgtgaagattgtgaagaaaaag 150198 Score = 105 bits (53), Expect = 5e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 787 agggagcaacagatgagtttgtgttggatcttgtagagcagtgtactttccaaaagcaac 846 |||||||||| ||||||||||||||||||||||| ||||| || || || ||||| || | Sbjct: 152014 agggagcaactgatgagtttgtgttggatcttgtggagcaatgcacatttcaaaaacagc 152073 Query: 847 gaataatgcatctggttatgacatcaagg 875 ||||||||||||| ||||||||||||||| Sbjct: 152074 gaataatgcatctagttatgacatcaagg 152102 Score = 99.6 bits (50), Expect = 3e-17 Identities = 118/140 (84%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 873 agggatgaagtggtggtgtcgcaatgtatagagctgaatgaagagctgcagaaggttctt 932 ||||||||||||||||| || ||| ||||| ||||| |||||||| || ||||| ||| Sbjct: 152218 agggatgaagtggtggtatcacaagcaatagaactgaacgaagagcttcacaaggtcctt 152277 Query: 933 gtacggcatgatacattgctttcagttcacccaactacgacgacagtaccatctaatctc 992 |||||||||||| | |||||||||||||| |||||| || |||||| | |||| |||| Sbjct: 152278 gtacggcatgatgcgttgctttcagttcagccaact---acaacagtagcttctactctc 152334 Query: 993 aaggaggacgaggaggaaga 1012 |||||||| ||||| ||||| Sbjct: 152335 aaggaggaagaggaagaaga 152354 Score = 85.7 bits (43), Expect = 5e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 711 agtataattcggaaagcatctagtgtcatggaagttctaagggatgtaataaattccatg 770 ||||||||||||||||| |||||||||||||||||||||| ||| || | |||| ||| Sbjct: 151749 agtataattcggaaagcttctagtgtcatggaagttctaaaggacgtgcttgattcgatg 151808 Query: 771 gatcctagacatcctgagg 789 ||||||||||| ||||||| Sbjct: 151809 gatcctagacaccctgagg 151827 Score = 79.8 bits (40), Expect = 3e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1222 tgattccgccgccacccgccaagcacgccgagagggagaggttcttccgcgagaagagca 1281 ||||||| || || || ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 152624 tgattccaccaccgcctgccaagcacgccgagagggagaggttctttcgggagaagagca 152683 Query: 1282 tgga 1285 |||| Sbjct: 152684 tgga 152687 Score = 71.9 bits (36), Expect = 7e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 262 ggaaagcgaaggatgtgatcaaatccataaagaagtgcataggaagcaggagcaaggatg 321 |||||||||||||||||||||| | |||||||||| |||| |||||||||||| | Sbjct: 149580 ggaaagcgaaggatgtgatcaagccgataaagaagtatttaggtagcaggagcaagaaca 149639 Query: 322 ctcaactttatgctgt 337 |||||||||||||||| Sbjct: 149640 ctcaactttatgctgt 149655 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1334 cagccgggacggcagcagctcgtgcagtggcagcacggattacggcgactgagg 1387 ||||||||||||||| |||||||| || |||||||| ||||| || |||||||| Sbjct: 152727 cagccgggacggcagtagctcgtgtagcggcagcacagattatggagactgagg 152780 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1080 tccatgccatcgtttcgatccatacccgaggagaagatgcgccgcccgctcaccat 1135 ||||| ||||| |||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 152491 tccataccatcatttcgatctatacctgaagacaagatgcgccgcccactcaccat 152546 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 554 gtctgctggtgtgaagttttcgaatcgtccaaatgttgtcattacacaagtacaa 608 ||||||||| || ||||||||||||| ||||||||||| ||||||||| |||| Sbjct: 150731 gtctgctggcgttcagttttcgaatcgcccaaatgttgttgttacacaagcacaa 150785
>gb|BT018107.1| Zea mays clone EL01N0553D12.c mRNA sequence Length = 788 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 1222 tgattccgccgccacccgccaagcacgccgagagggagaggttcttccgcgagaagagca 1281 |||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 334 tgatcccgccgccgcccgcaaagcacgccgagagggagaggttcttccaggagaagagca 393 Query: 1282 tggacg 1287 | |||| Sbjct: 394 tcgacg 399 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 1334 cagccgggacggcagcagctcgtgcagtggcagcacggattacggcgactga 1385 |||||||||| ||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 456 cagccgggacagcagcagctcgtgtagcggcagcactgattatggcgactga 507 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1005 gaggaagaagatgcagaaagtctatatcggagactgcggaaggggaa 1051 |||||||| |||| |||||||| ||||||||||||||||||||||| Sbjct: 117 gaggaagagaatgctgaaagtctctatcggagactgcggaaggggaa 163
>gb|BT013962.1| Lycopersicon esculentum clone 132986F, mRNA sequence Length = 1124 Score = 56.0 bits (28), Expect = 4e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 780 catcctgagggagcaacagatgagtttgtgttggatcttgtagagcagtgtactttccaa 839 |||||||||||||||| |||||||| | | |||||||| ||||| ||| | || ||| Sbjct: 703 catcctgagggagcaaaggatgagttcacgcttgatcttgtggagcaatgttcatttcaa 762 Query: 840 aagcaacgaataatgcatct 859 ||||||||| |||||||||| Sbjct: 763 aagcaacgagtaatgcatct 782 Score = 42.1 bits (21), Expect = 6.2 Identities = 75/93 (80%) Strand = Plus / Plus Query: 462 aagatatttcttctgttagatgcgacccaaacatcccttggtggagctaaaggaaagttc 521 |||||||||||||| ||||||| | ||||| || ||||| |||||| || | |||| Sbjct: 385 aagatatttcttcttctagatgctgcacaaacttctcttggcggagcttctgggaggttc 444 Query: 522 ccccagtactatgaggcatattatgaattagtg 554 || ||||| ||| |||||||||||||||||| Sbjct: 445 cctcagtattattccgcatattatgaattagtg 477
>gb|AC153459.9| Medicago truncatula clone mth2-47l12, complete sequence Length = 111294 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 319 atgctcaactttatgctgtcatg 341 ||||||||||||||||||||||| Sbjct: 8616 atgctcaactttatgctgtcatg 8638 Score = 44.1 bits (22), Expect = 1.6 Identities = 73/90 (81%) Strand = Plus / Plus Query: 465 atatttcttctgttagatgcgacccaaacatcccttggtggagctaaaggaaagttcccc 524 |||||||| || ||||||| || |||||||| ||||| || ||| ||||| || || Sbjct: 9379 atatttctcctactagatgcaacacaaacatctcttggcggtgcttcgggaaaatttccg 9438 Query: 525 cagtactatgaggcatattatgaattagtg 554 ||||| ||| ||||||||||||| |||||| Sbjct: 9439 cagtattataaggcatattatgacttagtg 9468
>ref|XM_001187465.1| PREDICTED: Strongylocentrotus purpuratus similar to Kaptin (actin binding protein) (LOC760234), mRNA Length = 1416 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 991 tcaaggaggacgaggaggaagaagatg 1017 |||||||||| |||||||||||||||| Sbjct: 818 tcaaggaggaggaggaggaagaagatg 844
>ref|XM_001198835.1| PREDICTED: Strongylocentrotus purpuratus similar to Kaptin (actin binding protein) (LOC762998), mRNA Length = 1416 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 991 tcaaggaggacgaggaggaagaagatg 1017 |||||||||| |||||||||||||||| Sbjct: 818 tcaaggaggaggaggaggaagaagatg 844
>ref|NM_001062305.1| Oryza sativa (japonica cultivar-group) Os05g0463000 (Os05g0463000) mRNA, complete cds Length = 1992 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 995 ggaggacgaggaggaagaagatgcaga 1021 |||||| |||||||||||||||||||| Sbjct: 1669 ggaggaagaggaggaagaagatgcaga 1695
>ref|XM_001054964.1| PREDICTED: Rattus norvegicus multiple C2 domains, transmembrane 1 (predicted) (Mctp1_predicted), mRNA Length = 2284 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 995 ggaggacgaggaggaagaagatg 1017 ||||||||||||||||||||||| Sbjct: 1858 ggaggacgaggaggaagaagatg 1880
>gb|DQ022603.1| Zea mays subsp. mexicana cultivar CIMMYT_11396 Opaque-2 (O2) gene, partial cds Length = 2051 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaagatgcag 1020 ||||||| ||||||||||||||||||| Sbjct: 146 aggaggaggaggaggaagaagatgcag 120
>gb|DQ022602.1| Zea mays subsp. mexicana cultivar CIMMYT_11394 Opaque-2 (O2) gene, partial cds Length = 2027 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaagatgcag 1020 ||||||| ||||||||||||||||||| Sbjct: 142 aggaggaggaggaggaagaagatgcag 116
>gb|AC148758.19| Medicago truncatula clone mth2-50l17, complete sequence Length = 128831 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 319 atgctcaactttatgctgtcatg 341 ||||||||||||||||||||||| Sbjct: 119001 atgctcaactttatgctgtcatg 119023 Score = 44.1 bits (22), Expect = 1.6 Identities = 73/90 (81%) Strand = Plus / Plus Query: 465 atatttcttctgttagatgcgacccaaacatcccttggtggagctaaaggaaagttcccc 524 |||||||| || ||||||| || |||||||| ||||| || ||| ||||| || || Sbjct: 119764 atatttctcctactagatgcaacacaaacatctcttggcggtgcttcgggaaaatttccg 119823 Query: 525 cagtactatgaggcatattatgaattagtg 554 ||||| ||| ||||||||||||| |||||| Sbjct: 119824 cagtattataaggcatattatgacttagtg 119853
>gb|AC148755.6| Medicago truncatula clone mth2-24n16, complete sequence Length = 119876 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 319 atgctcaactttatgctgtcatg 341 ||||||||||||||||||||||| Sbjct: 96130 atgctcaactttatgctgtcatg 96108 Score = 44.1 bits (22), Expect = 1.6 Identities = 73/90 (81%) Strand = Plus / Minus Query: 465 atatttcttctgttagatgcgacccaaacatcccttggtggagctaaaggaaagttcccc 524 |||||||| || ||||||| || |||||||| ||||| || ||| ||||| || || Sbjct: 95367 atatttctcctactagatgcaacacaaacatctcttggcggtgcttcgggaaaatttccg 95308 Query: 525 cagtactatgaggcatattatgaattagtg 554 ||||| ||| ||||||||||||| |||||| Sbjct: 95307 cagtattataaggcatattatgacttagtg 95278
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 995 ggaggacgaggaggaagaagatgcaga 1021 |||||| |||||||||||||||||||| Sbjct: 12794 ggaggaagaggaggaagaagatgcaga 12768
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Minus Query: 995 ggaggacgaggaggaagaagatgcaga 1021 |||||| |||||||||||||||||||| Sbjct: 22600256 ggaggaagaggaggaagaagatgcaga 22600230
>dbj|AK120882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028F01, full insert sequence Length = 1994 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 995 ggaggacgaggaggaagaagatgcaga 1021 |||||| |||||||||||||||||||| Sbjct: 1669 ggaggaagaggaggaagaagatgcaga 1695
>ref|XM_001220808.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_01588) mRNA, complete cds Length = 1128 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 938 aggaggacgaggaggaagaaga 959
>ref|NM_001056404.1| Oryza sativa (japonica cultivar-group) Os03g0302200 (Os03g0302200) mRNA, complete cds Length = 3394 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 ggaggacgaggaggaagaagat 1016 |||||||||||||||||||||| Sbjct: 1095 ggaggacgaggaggaagaagat 1116
>ref|XM_001168565.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 2 (LOC452337), mRNA Length = 885 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 358 aggaggacgaggaggaagaaga 337
>ref|XM_001168537.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 1 (LOC452337), mRNA Length = 899 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 372 aggaggacgaggaggaagaaga 351
>ref|XM_001168783.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 9 (LOC452337), mRNA Length = 1029 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 358 aggaggacgaggaggaagaaga 337
>ref|XM_001168758.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 8 (LOC452337), mRNA Length = 1313 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 642 aggaggacgaggaggaagaaga 621
>ref|XM_001168648.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 6 (LOC452337), mRNA Length = 2852 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1707 aggaggacgaggaggaagaaga 1686
>ref|XM_001168626.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 5 (LOC452337), mRNA Length = 2234 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1707 aggaggacgaggaggaagaaga 1686
>ref|XM_001168589.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 3 (LOC452337), mRNA Length = 2250 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1707 aggaggacgaggaggaagaaga 1686
>ref|XM_001168610.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 4 (LOC452337), mRNA Length = 2267 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1740 aggaggacgaggaggaagaaga 1719
>ref|XM_001168672.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 7 (LOC452337), mRNA Length = 2459 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1707 aggaggacgaggaggaagaaga 1686
>ref|XM_001168903.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 13 (LOC452337), mRNA Length = 2378 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1707 aggaggacgaggaggaagaaga 1686
>ref|XM_001168832.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 10 (LOC452337), mRNA Length = 1640 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 969 aggaggacgaggaggaagaaga 948
>ref|XM_509455.2| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 14 (LOC452337), mRNA Length = 2402 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1731 aggaggacgaggaggaagaaga 1710
>ref|XM_001168883.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 12 (LOC452337), mRNA Length = 2411 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1740 aggaggacgaggaggaagaaga 1719
>ref|XM_001168858.1| PREDICTED: Pan troglodytes similar to ADP-ribosylation-like factor 6 interacting protein 4, transcript variant 11 (LOC452337), mRNA Length = 2435 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1764 aggaggacgaggaggaagaaga 1743
>ref|XM_001058466.1| PREDICTED: Rattus norvegicus similar to Down syndrome critical region homolog 6 (LOC680702), mRNA Length = 1172 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 547 aggaggacgaggaggaagaaga 568
>ref|XM_001053866.1| PREDICTED: Rattus norvegicus similar to Down syndrome critical region homolog 6 (LOC678928), mRNA Length = 1172 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 547 aggaggacgaggaggaagaaga 568
>ref|XM_001096247.1| PREDICTED: Macaca mulatta similar to SRp25 nuclear protein isoform 2 (LOC707810), mRNA Length = 1541 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 876 aggaggacgaggaggaagaaga 855
>ref|XR_010284.1| PREDICTED: Macaca mulatta similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1) (LOC698186), mRNA Length = 2446 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1484 aggaggacgaggaggaagaaga 1505
>gb|BC003593.1| Homo sapiens mRNA similar to protein phosphatase 2, regulatory subunit B (B56), gamma isoform (cDNA clone IMAGE:2822439) Length = 5329 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 3078 aggaggacgaggaggaagaaga 3057
>ref|NM_001077878.1| Bos taurus nucleosome assembly protein 1-like 5 (NAP1L5), mRNA gb|BC114819.1| Bos taurus nucleosome assembly protein 1-like 5, mRNA (cDNA clone MGC:140439 IMAGE:8181517), complete cds Length = 1944 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 577 aggaggacgaggaggaagaaga 598
>ref|NM_106348.3| Arabidopsis thaliana protein transporter (AT1G76970) mRNA, complete cds Length = 1761 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 421 tcaaaatagtgaagaaaaagacggaa 446 |||||||||||||||||||| ||||| Sbjct: 514 tcaaaatagtgaagaaaaagccggaa 539
>ref|NM_005104.2| Homo sapiens bromodomain containing 2 (BRD2), mRNA Length = 4693 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 3197 aggaggacgaggaggaagaaga 3218
>gb|BC015909.1| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4, mRNA (cDNA clone MGC:19918 IMAGE:4648478), complete cds Length = 1711 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 977 aggaggacgaggaggaagaaga 956
>gb|BC001958.1| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4, mRNA (cDNA clone MGC:814 IMAGE:3544177), complete cds Length = 942 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 254 aggaggacgaggaggaagaaga 233
>ref|NM_001002252.1| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4 (ARL6IP4), transcript variant 4, mRNA Length = 1402 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 647 aggaggacgaggaggaagaaga 626
>ref|NM_001002251.1| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4 (ARL6IP4), transcript variant 3, mRNA Length = 1354 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 680 aggaggacgaggaggaagaaga 659
>ref|NM_016638.2| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4 (ARL6IP4), transcript variant 2, mRNA Length = 1321 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 647 aggaggacgaggaggaagaaga 626
>ref|NM_018694.2| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4 (ARL6IP4), transcript variant 1, mRNA Length = 1378 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 704 aggaggacgaggaggaagaaga 683
>gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, complete sequence Length = 184795 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 122309 aggaggacgaggaggaagaaga 122288
>gb|BC063840.1| Homo sapiens bromodomain containing 2, mRNA (cDNA clone MGC:74927 IMAGE:6181728), complete cds Length = 3399 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1665 aggaggacgaggaggaagaaga 1686
>gb|BC015569.2| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4, mRNA (cDNA clone MGC:22989 IMAGE:3609127), complete cds Length = 1014 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 250 aggaggacgaggaggaagaaga 229
>gb|BC007715.2| Homo sapiens bromodomain containing 2, mRNA (cDNA clone IMAGE:4302993), partial cds Length = 2350 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 2178 aggaggacgaggaggaagaaga 2199
>gb|AC121930.3| Mus musculus BAC clone RP24-205C1 from chromosome 15, complete sequence Length = 148390 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 41834 aggaggacgaggaggaagaaga 41855
>gb|BC000477.2| Homo sapiens bromodomain containing 2, mRNA (cDNA clone IMAGE:2961647) Length = 2341 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 2169 aggaggacgaggaggaagaaga 2190
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 ggaggacgaggaggaagaagat 1016 |||||||||||||||||||||| Sbjct: 41192 ggaggacgaggaggaagaagat 41213
>gb|BT010453.1| Arabidopsis thaliana At1g76970 mRNA, complete cds Length = 1341 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 421 tcaaaatagtgaagaaaaagacggaa 446 |||||||||||||||||||| ||||| Sbjct: 269 tcaaaatagtgaagaaaaagccggaa 294
>dbj|AK056504.1| Homo sapiens cDNA FLJ31942 fis, clone NT2RP7006717, highly similar to Mus musculus Ring3 mRNA Length = 3404 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 3250 aggaggacgaggaggaagaaga 3271
>dbj|AK027285.1| Homo sapiens cDNA FLJ14379 fis, clone HEMBA1001809 Length = 1371 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 622 aggaggacgaggaggaagaaga 601
>dbj|AK024312.1| Homo sapiens cDNA FLJ14250 fis, clone OVARC1001244, highly similar to H.sapiens mRNA for Drosophila female sterile homeotic (FSH) homologue Length = 1884 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1730 aggaggacgaggaggaagaaga 1751
>ref|XM_381370.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01194.1) partial mRNA Length = 6468 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1226 aggaggacgaggaggaagaaga 1247
>gb|AF267748.1| Homo sapiens HSVI binding protein mRNA, complete cds Length = 904 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 368 aggaggacgaggaggaagaaga 347
>gb|DQ099385.1| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4 mRNA, complete cds, alternatively spliced Length = 546 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 256 aggaggacgaggaggaagaaga 235
>dbj|AK221351.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-27-C03 Length = 1605 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 421 tcaaaatagtgaagaaaaagacggaa 446 |||||||||||||||||||| ||||| Sbjct: 386 tcaaaatagtgaagaaaaagccggaa 411
>emb|X96670.1|HSRING3GE H.sapiens RING3 gene Length = 14561 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 6268 aggaggacgaggaggaagaaga 6289
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 555 tctgctggtgtgaagttttcga 576 |||||||||||||||||||||| Sbjct: 332447 tctgctggtgtgaagttttcga 332426
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 992 caaggaggacgaggaggaagaagatg 1017 ||||||||| |||||||||||||||| Sbjct: 23796709 caaggaggaggaggaggaagaagatg 23796684
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 ggaggacgaggaggaagaagat 1016 |||||||||||||||||||||| Sbjct: 10622379 ggaggacgaggaggaagaagat 10622400
>emb|X62083.1|HSFSHMR H.sapiens mRNA for Drosophila female sterile homeotic (FSH) homologue Length = 4053 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 2532 aggaggacgaggaggaagaaga 2553
>emb|Z96104.1|HSO27 Human DNA sequence from clone XX-O27 on chromosome 6 Contains the BRD2 gene encoding bromodomain-containing 2 protein, the HLA-DMA gene encoding major histocompatibility complex class II DM alpha, two CpG islands, ESTs, STSs and GSSs, complete sequence Length = 38902 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 8286 aggaggacgaggaggaagaaga 8265
>emb|Z84497.1|HSO14 Human DNA sequence from clone XX-O14 on chromosome 6 Contains the BRD2 gene for bromodomain-containing protein 2 (RING3, KIAA9001), ESTs, STSs, GSSs and two CpG islands, complete sequence Length = 40740 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 25129 aggaggacgaggaggaagaaga 25108
>emb|BX005422.5| Human DNA sequence from clone DASS-32K24 on chromosome 6, complete sequence Length = 97466 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 5910 aggaggacgaggaggaagaaga 5931
>emb|AL805913.4| Human DNA sequence from clone DAQB-22D21 on chromosome 6 Contains the 3' end of the BRD2 gene for bromodomain containing 2, the HLA-DOA gene for the major histocompatibility complex, class II, DO alpha, the HLA-DPA1 gene for the major histocompatibility complex, class II, DP alpha 1, the RPL32P1 pseudogene for ribosomal protein L32 pseudogene 1, the 3' end of the HLA-DPB1 gene for the major histocompatibility complex, class II, DP beta 1 and 1 CpG isalnd, complete sequence Length = 106728 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 2865 aggaggacgaggaggaagaaga 2886
>emb|AL645941.11| Human DNA sequence from clone XXbac-181M17 on chromosome 6 contains the HLA-DMB gene for major histocompatibility complex, class II, DM beta, the HLA-DMA gene for major histocompatibility complex, class II, DM alpha, the BRD2 gene for bromodomain containing 2 and two CpG islands, complete sequence Length = 71501 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 55360 aggaggacgaggaggaagaaga 55381
>emb|AL662845.5| Human DNA sequence from clone XXbac-136A3 on chromosome 6 contains the HLA-DMB gene for major histocompatibility complex, class II, DM beta, the HLA-DMA gene for major histocompatibility complex, class II, DM alpha, the BRD2 gene for bromodomain containing 2, the HLA-DOA gene for major histocompatibility complex, class II, DO alpha and two CpG islands, complete sequence Length = 97128 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 55376 aggaggacgaggaggaagaaga 55397
>gb|S78771.1| NAT=CpG island-associated gene [human, mRNA, 1741 nt] Length = 1741 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1567 aggaggacgaggaggaagaaga 1588
>emb|CR857215.1| Pongo pygmaeus mRNA; cDNA DKFZp469K1821 (from clone DKFZp469K1821) Length = 3147 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 2985 aggaggacgaggaggaagaaga 3006
>emb|BX647233.1|HSM807377 Homo sapiens mRNA; cDNA DKFZp686N0336 (from clone DKFZp686N0336) Length = 3138 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 1513 aggaggacgaggaggaagaaga 1534
>gb|BC001885.1| Homo sapiens cDNA clone IMAGE:3544244, with apparent retained intron Length = 2440 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 2268 aggaggacgaggaggaagaaga 2289
>emb|AL832722.1|HSM804033 Homo sapiens mRNA; cDNA DKFZp313H139 (from clone DKFZp313H139) Length = 4667 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 3137 aggaggacgaggaggaagaaga 3158
>gb|BC094839.1| Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4, mRNA (cDNA clone MGC:104844 IMAGE:6339167), complete cds Length = 1424 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 687 aggaggacgaggaggaagaaga 666
>emb|CR936909.2| Human DNA sequence from clone DAMA-214M2 on chromosome 6, complete sequence Length = 40809 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 2074 aggaggacgaggaggaagaaga 2095
>emb|BX648109.1|HSM808256 Homo sapiens mRNA; cDNA DKFZp686E1432 (from clone DKFZp686E1432) Length = 4625 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 3111 aggaggacgaggaggaagaaga 3132
>emb|CR759798.3| Human DNA sequence from clone DAMC-226H3 on chromosome 6, complete sequence Length = 118408 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 116622 aggaggacgaggaggaagaaga 116643
>emb|AL645746.10| Mouse DNA sequence from clone RP23-153B6 on chromosome 13, complete sequence Length = 75405 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 68489 aggaggacgaggaggaagaaga 68510
>gb|AY211318.1| Eleutherodactylus sp. AJC-2003b cellular myelocytomatosis (c-myc) gene, exons 2 and 3 and partial cds Length = 1168 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 988 aggaggacgaggaggaagaaga 1009
>gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosome 15, complete sequence Length = 211214 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 171056 aggaggacgaggaggaagaaga 171077
>emb|CR626482.1| full-length cDNA clone CS0DL012YN05 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1273 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 642 aggaggacgaggaggaagaaga 621
>emb|CR625814.1| full-length cDNA clone CS0DI019YI01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 935 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 269 aggaggacgaggaggaagaaga 248
>emb|CR622330.1| full-length cDNA clone CS0DL008YA20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 900 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 236 aggaggacgaggaggaagaaga 215
>emb|CR622052.1| full-length cDNA clone CS0DF020YN14 of Fetal brain of Homo sapiens (human) Length = 1677 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 642 aggaggacgaggaggaagaaga 621
>emb|CR612958.1| full-length cDNA clone CS0DC010YC03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 985 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 323 aggaggacgaggaggaagaaga 302
>emb|CR608335.1| full-length cDNA clone CS0DG007YF12 of B cells (Ramos cell line) of Homo sapiens (human) Length = 849 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 182 aggaggacgaggaggaagaaga 161
>emb|CR607411.1| full-length cDNA clone CS0DM003YG04 of Fetal liver of Homo sapiens (human) Length = 1668 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 610 aggaggacgaggaggaagaaga 589
>emb|CR600790.1| full-length cDNA clone CS0DF009YC18 of Fetal brain of Homo sapiens (human) Length = 1782 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 659 aggaggacgaggaggaagaaga 638
>emb|CR599283.1| full-length cDNA clone CS0CAP004YG17 of Thymus of Homo sapiens (human) Length = 991 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 355 aggaggacgaggaggaagaaga 334
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 992 caaggaggacgaggaggaagaagatg 1017 ||||||||| |||||||||||||||| Sbjct: 36374 caaggaggaggaggaggaagaagatg 36349
>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06 Length = 156500 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 992 caaggaggacgaggaggaagaagatg 1017 ||||||||| |||||||||||||||| Sbjct: 144785 caaggaggaggaggaggaagaagatg 144760
>gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163077 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 54066 aggaggacgaggaggaagaaga 54045
>dbj|AK120853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023P20, full insert sequence Length = 3397 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 ggaggacgaggaggaagaagat 1016 |||||||||||||||||||||| Sbjct: 1096 ggaggacgaggaggaagaagat 1117
>dbj|D42040.1|HUMKIA9001 Homo sapiens KIAA9001 mRNA, complete cds Length = 4664 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 3197 aggaggacgaggaggaagaaga 3218
>gb|AC153369.4| Mus musculus 10 BAC RP23-103E4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197003 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 50287 aggaggacgaggaggaagaaga 50308
>gb|AF056116.1|AF056116 Fugu rubripes serine/threonine kinase receptor type1, All-1 related protein (ALR), fugu hedgehog (fhh), Ikaros-like, wnt1, wnt10b, ARF3, erbB3, PAS1, and L41 ribosomal protein genes, complete cds; LRP1 gene, partial cds; and unknown genes Length = 148640 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 992 caaggaggacgaggaggaagaagatg 1017 ||||||||| |||||||||||||||| Sbjct: 25379 caaggaggaagaggaggaagaagatg 25354
>gb|AC147230.3| Mus musculus BAC clone RP23-239N12 from 15, complete sequence Length = 255976 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 146331 aggaggacgaggaggaagaaga 146310
>gb|M80613.1|HUMFSHG Human homolog of Drosophila female sterile homeotic mRNA, complete cds Length = 4053 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 2532 aggaggacgaggaggaagaaga 2553
>dbj|AB035384.1| Homo sapiens mRNA for SRp25 nuclear protein, complete cds Length = 952 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 285 aggaggacgaggaggaagaaga 264
>dbj|AK074098.1| Homo sapiens mRNA for FLJ00169 protein Length = 5618 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaaga 1015 |||||||||||||||||||||| Sbjct: 4872 aggaggacgaggaggaagaaga 4851
>emb|CT573181.12| Zebrafish DNA sequence from clone DKEY-174L22 in linkage group 10, complete sequence Length = 143897 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 109469 aggaggacgaggaggaagaag 109489
>ref|XM_413777.2| PREDICTED: Gallus gallus La ribonucleoprotein domain family, member 6 (LARP6), mRNA Length = 1837 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 107 aggaggacgaggaggaagaag 127
>ref|XM_001181424.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC576785 (LOC576785), mRNA Length = 2661 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 993 aaggaggacgaggaggaagaagatg 1017 ||||||||||| ||||||||||||| Sbjct: 1966 aaggaggacgatgaggaagaagatg 1990
>ref|XM_794835.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC576785 (LOC576785), mRNA Length = 2661 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 993 aaggaggacgaggaggaagaagatg 1017 ||||||||||| ||||||||||||| Sbjct: 1966 aaggaggacgatgaggaagaagatg 1990
>ref|NM_001049019.1| Oryza sativa (japonica cultivar-group) Os01g0229200 (Os01g0229200) mRNA, complete cds Length = 2597 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 213 gactgggccaagaacatcgaaatctgcga 241 ||||||||||||||||| || |||||||| Sbjct: 213 gactgggccaagaacatggagatctgcga 241
>ref|XR_021090.1| PREDICTED: Pan troglodytes papilin (PAPLN), mRNA Length = 6278 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 5382 ggaaatggcttcagaaatggt 5402
>gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete sequence Length = 294716 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaagatgcagaa 1022 ||||||| |||||||||||||| |||||| Sbjct: 125691 aggaggaggaggaggaagaagaagcagaa 125663
>emb|CR925778.5| Zebrafish DNA sequence from clone DKEY-63L2 in linkage group 10, complete sequence Length = 211740 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 61627 aggaggacgaggaggaagaag 61647
>gb|AC165307.6| Mus musculus chromosome 3, clone RP24-372I24, complete sequence Length = 136853 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gagggggaagaaagattgtag 131 ||||||||||||||||||||| Sbjct: 30468 gagggggaagaaagattgtag 30488
>gb|AF109907.1|DJ534K4 Homo sapiens S164 gene, partial cds; PS1 and hypothetical protein genes, complete cds; and S171 gene, partial cds Length = 216387 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 191936 ggaaatggcttcagaaatggt 191956
>gb|BC042057.1| Homo sapiens papilin, proteoglycan-like sulfated glycoprotein, mRNA (cDNA clone IMAGE:5588745), complete cds Length = 1898 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 1371 ggaaatggcttcagaaatggt 1391
>gb|BC056464.1| Mus musculus inositol 1,3,4-triphosphate 5/6 kinase, mRNA (cDNA clone MGC:67230 IMAGE:5707377), complete cds Length = 2849 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1001 cgaggaggaagaagatgcaga 1021 ||||||||||||||||||||| Sbjct: 21 cgaggaggaagaagatgcaga 41
>ref|NM_173462.2| Homo sapiens papilin, proteoglycan-like sulfated glycoprotein (PAPLN), mRNA Length = 5799 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 5335 ggaaatggcttcagaaatggt 5355
>gb|AC164600.5| Mus musculus chromosome 1, clone RP23-366M5, complete sequence Length = 191581 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1000 acgaggaggaagaagatgcagaaag 1024 |||||||||||||||||| |||||| Sbjct: 124842 acgaggaggaagaagatgaagaaag 124818
>ref|NM_021315.1| Mus musculus nucleolar complex associated 3 homolog (S. cerevisiae) (Noc3l), mRNA gb|BC031132.1| Mus musculus nucleolar complex associated 3 homolog (S. cerevisiae), mRNA (cDNA clone MGC:37198 IMAGE:4954951), complete cds Length = 2949 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 335 aggaggacgaggaggaagaag 355
>gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome 9, complete sequence Length = 245088 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 993 aaggaggacgaggaggaagaagatg 1017 |||||||| |||||||||||||||| Sbjct: 125394 aaggaggaagaggaggaagaagatg 125418
>ref|XM_543480.2| PREDICTED: Canis familiaris similar to pescadillo homolog 1, containing BRCT domain (LOC486354), mRNA Length = 1826 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1002 gaggaggaagaagatgcagaa 1022 ||||||||||||||||||||| Sbjct: 1494 gaggaggaagaagatgcagaa 1514
>gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, complete sequence Length = 167945 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 9105 aggaggacgaggaggaagaag 9085
>gb|AC131801.3| Mus musculus BAC clone RP24-538A12 from chromosome 10, complete sequence Length = 158745 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 995 ggaggacgaggaggaagaaga 1015 ||||||||||||||||||||| Sbjct: 102923 ggaggacgaggaggaagaaga 102903
>gb|AC110517.9| Mus musculus chromosome 17, clone RP23-13F15, complete sequence Length = 218657 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gagggggaagaaagattgtag 131 ||||||||||||||||||||| Sbjct: 130438 gagggggaagaaagattgtag 130458
>gb|AC131711.3| Mus musculus BAC clone RP23-192M18 from 6, complete sequence Length = 228400 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaagatgcagaa 1022 ||||||| |||||||||||||||| |||| Sbjct: 56603 aggaggaggaggaggaagaagatgaagaa 56575
>gb|AC121872.2| Mus musculus BAC clone RP24-122E10 from 12, complete sequence Length = 199519 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 98785 aggaggacgaggaggaagaag 98765
>gb|AY358330.1| Homo sapiens clone DNA62849 papilin (UNQ2420) mRNA, complete cds Length = 3719 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 3290 ggaaatggcttcagaaatggt 3310
>dbj|AK125658.1| Homo sapiens cDNA FLJ43670 fis, clone SYNOV4007521 Length = 2994 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 2565 ggaaatggcttcagaaatggt 2585
>dbj|AK127354.1| Homo sapiens cDNA FLJ45428 fis, clone BRHIP3038735 Length = 3963 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 3534 ggaaatggcttcagaaatggt 3554
>gb|AY129558.1| Aeromonas hydrophila flg operon, complete sequence Length = 16829 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 caggtcattgataatgggctt 407 ||||||||||||||||||||| Sbjct: 9097 caggtcattgataatgggctt 9077
>dbj|AK021713.1| Homo sapiens cDNA FLJ11651 fis, clone HEMBA1004460 Length = 1652 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 1206 ggaaatggcttcagaaatggt 1226
>gb|AC107743.14| Mus musculus chromosome 1, clone RP23-326A12, complete sequence Length = 221645 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 aaagaagtgcataggaagcag 310 ||||||||||||||||||||| Sbjct: 61009 aaagaagtgcataggaagcag 61029
>dbj|AB186899.1| Nicotiana tabacum ZFT1 mRNA for Cys2-His2 type zinc finger protein, complete cds Length = 891 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 ctcctccgccgccggcgacga 54 ||||||||||||||||||||| Sbjct: 430 ctcctccgccgccggcgacga 410
>gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome 12, complete sequence Length = 181828 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1001 cgaggaggaagaagatgcaga 1021 ||||||||||||||||||||| Sbjct: 63711 cgaggaggaagaagatgcaga 63691
>gb|AC100322.8| Mus musculus chromosome 7, clone RP23-124O24, complete sequence Length = 219314 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 993 aaggaggacgaggaggaagaagatg 1017 |||||||| |||||||||||||||| Sbjct: 65552 aaggaggaagaggaggaagaagatg 65576
>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224664 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaagatgcagaa 1022 ||||||| ||||||||||| ||||||||| Sbjct: 198653 aggaggaggaggaggaagaggatgcagaa 198625
>dbj|AK134051.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830420C13 product:AD24 (CDNA sequence AF233884) homolog [Mus musculus], full insert sequence Length = 2357 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 330 aggaggacgaggaggaagaag 350
>gb|AC127343.3| Mus musculus BAC clone RP23-194I18 from chromosome 10, complete sequence Length = 198624 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaagatgcagaa 1022 ||||||| ||||||||||| ||||||||| Sbjct: 111714 aggaggaggaggaggaagaggatgcagaa 111686
>dbj|AK168944.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920066M10 product:AD24 (CDNA sequence AF233884), full insert sequence Length = 3436 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 373 aggaggacgaggaggaagaag 393
>ref|NM_172584.1| Mus musculus inositol 1,3,4-triphosphate 5/6 kinase (Itpk1), mRNA dbj|AK038913.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230074J21 product:INOSITOL 3,4,5,6 TETRAKISPHOSPHATE 1-KINASE/INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE homolog [Homo sapiens], full insert sequence Length = 2858 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1001 cgaggaggaagaagatgcaga 1021 ||||||||||||||||||||| Sbjct: 41 cgaggaggaagaagatgcaga 61
>emb|CR762415.10| Zebrafish DNA sequence from clone CH211-39K23 in linkage group 1, complete sequence Length = 179253 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaagatgc 1018 |||||||||||||||| |||||||| Sbjct: 50227 aggaggacgaggaggatgaagatgc 50203
>gb|AC021076.5| Homo sapiens chromosome 5 clone CTB-166J1, complete sequence Length = 92068 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1003 aggaggaagaagatgcagaaa 1023 ||||||||||||||||||||| Sbjct: 49851 aggaggaagaagatgcagaaa 49831
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 996 gaggacgaggaggaagaagatgcag 1020 ||||| ||||||||||||||||||| Sbjct: 27659622 gaggaggaggaggaagaagatgcag 27659646
>gb|AC093829.2| Homo sapiens BAC clone RP11-401E5 from 4, complete sequence Length = 169483 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 994 aggaggacgaggaggaagaagatgcagaa 1022 ||||||| |||||||||||||||| |||| Sbjct: 86612 aggaggaggaggaggaagaagatgaagaa 86584
>gb|AC104652.3| Homo sapiens BAC clone RP11-273F23 from 4, complete sequence Length = 130206 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 acacaagtacaaaatcctgtg 617 ||||||||||||||||||||| Sbjct: 101721 acacaagtacaaaatcctgtg 101741
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 213 gactgggccaagaacatcgaaatctgcga 241 ||||||||||||||||| || |||||||| Sbjct: 7128448 gactgggccaagaacatggagatctgcga 7128476
>gb|AE009864.1|AE009864 Pyrobaculum aerophilum strain IM2 section 119 of 201 of the complete genome Length = 10371 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1576 tcttttccagtttcttcttcc 1596 ||||||||||||||||||||| Sbjct: 5350 tcttttccagtttcttcttcc 5330
>emb|AL034554.8|HS994L9 Human DNA sequence from clone RP5-994L9 on chromosome 20p12.3-13 Contains STS and GSSs, complete sequence Length = 137739 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1569 tgataattcttttccagtttc 1589 ||||||||||||||||||||| Sbjct: 123869 tgataattcttttccagtttc 123889
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 213 gactgggccaagaacatcgaaatctgcga 241 ||||||||||||||||| || |||||||| Sbjct: 23096 gactgggccaagaacatggagatctgcga 23124
>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24 Length = 107482 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 995 ggaggacgaggaggaagaaga 1015 ||||||||||||||||||||| Sbjct: 64437 ggaggacgaggaggaagaaga 64417
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1496 gagagggggaggccgccttgg 1516 ||||||||||||||||||||| Sbjct: 269639 gagagggggaggccgccttgg 269659
>emb|BX537757.1|HSM805841 Homo sapiens mRNA; cDNA DKFZp779D0163 (from clone DKFZp779D0163) Length = 3974 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 3510 ggaaatggcttcagaaatggt 3530
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 213 gactgggccaagaacatcgaaatctgcga 241 ||||||||||||||||| || |||||||| Sbjct: 116028 gactgggccaagaacatggagatctgcga 116056
>emb|CR377201.10| Zebrafish DNA sequence from clone CH211-210H21 in linkage group 1, complete sequence Length = 140461 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaagatgc 1018 |||||||||||||||| |||||||| Sbjct: 111715 aggaggacgaggaggatgaagatgc 111739
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 996 gaggacgaggaggaagaagatgcag 1020 ||||| ||||||||||||||||||| Sbjct: 38724 gaggaggaggaggaagaagatgcag 38748
>gb|AC108866.5| Homo sapiens BAC clone RP11-44D21 from 4, complete sequence Length = 152822 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 acacaagtacaaaatcctgtg 617 ||||||||||||||||||||| Sbjct: 110167 acacaagtacaaaatcctgtg 110187
>gb|AC154535.2| Mus musculus BAC clone RP23-447M9 from chromosome 13, complete sequence Length = 179176 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 993 aaggaggacgaggaggaagaagatg 1017 |||||||| |||||||||||||||| Sbjct: 24560 aaggaggaggaggaggaagaagatg 24536
>dbj|AB077991.1| Mus musculus mRNA for AD24, complete cds Length = 2782 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 335 aggaggacgaggaggaagaag 355
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 996 gaggacgaggaggaagaagatgcag 1020 ||||| ||||||||||||||||||| Sbjct: 116615 gaggaggaggaggaagaagatgcag 116639
>emb|AL110280.1|HSM800875 Homo sapiens mRNA; cDNA DKFZp434F053 (from clone DKFZp434F053) Length = 4747 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 4236 ggaaatggcttcagaaatggt 4256
>emb|BX324156.6| Zebrafish DNA sequence from clone CH211-215C3 in linkage group 1, complete sequence Length = 214471 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaagatgc 1018 |||||||||||||||| |||||||| Sbjct: 103256 aggaggacgaggaggatgaagatgc 103280
>gb|AC004846.2|AC004846 Homo sapiens PAC clone RP4-647C14 from 14q24.3, complete sequence Length = 154616 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 82765 ggaaatggcttcagaaatggt 82745
>gb|AY952432.1| Ottelia acuminata tRNA-Lys (trnK) gene, partial sequence; and maturase K (matK) gene, complete cds; chloroplast Length = 2584 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1258 agaggttcttccgcgagaaga 1278 ||||||||||||||||||||| Sbjct: 405 agaggttcttccgcgagaaga 425
>gb|AF286475.1|AF286475 Takifugu rubripes retinitis pigmentosa GTPase regulator-like protein gene, partial cds Length = 2376 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1002 gaggaggaagaagatgcagaa 1022 ||||||||||||||||||||| Sbjct: 2008 gaggaggaagaagatgcagaa 2028
>ref|XM_954813.1| Neurospora crassa OR74A hypothetical protein (NCU02262.1) partial mRNA Length = 987 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 995 ggaggacgaggaggaagaaga 1015 ||||||||||||||||||||| Sbjct: 144 ggaggacgaggaggaagaaga 164
>dbj|AK131073.1| Homo sapiens mRNA for FLJ00259 protein Length = 5108 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 ggaaatggcttcagaaatggt 178 ||||||||||||||||||||| Sbjct: 4679 ggaaatggcttcagaaatggt 4699
>dbj|AK066024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047G02, full insert sequence Length = 2599 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 213 gactgggccaagaacatcgaaatctgcga 241 ||||||||||||||||| || |||||||| Sbjct: 214 gactgggccaagaacatggagatctgcga 242
>emb|CR387997.18| Zebrafish DNA sequence from clone DKEY-13E3 in linkage group 4, complete sequence Length = 158108 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 634 aaccgaataaagacaatcttt 654 ||||||||||||||||||||| Sbjct: 140122 aaccgaataaagacaatcttt 140142
>gb|AC148154.15| Medicago truncatula clone mth2-17a6, complete sequence Length = 138465 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaag 1014 ||||||||||||||||||||| Sbjct: 54442 aggaggacgaggaggaagaag 54462
>emb|BX571805.4| Mouse DNA sequence from clone RP23-18E8 on chromosome X, complete sequence Length = 114507 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gagggggaagaaagattgtag 131 ||||||||||||||||||||| Sbjct: 79162 gagggggaagaaagattgtag 79182
>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence Length = 163871 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaagatgcagaa 1022 ||||||| |||||||||||||||| |||| Sbjct: 116926 aggaggaggaggaggaagaagatgaagaa 116954
>gb|AC138621.4| Mus musculus BAC clone RP23-273E16 from 6, complete sequence Length = 225376 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 994 aggaggacgaggaggaagaagatgcagaa 1022 ||||||| |||||||||||||||| |||| Sbjct: 45611 aggaggaggaggaggaagaagatgaagaa 45639
>emb|AL627328.17| Mouse DNA sequence from clone RP23-299J22 on chromosome 4, complete sequence Length = 229494 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 993 aaggaggacgaggaggaagaagatg 1017 |||||||| |||||||||||||||| Sbjct: 180567 aaggaggaagaggaggaagaagatg 180543
>emb|AL672157.5| Mouse DNA sequence from clone RP24-499M12 on chromosome 2, complete sequence Length = 67987 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 992 caaggaggacgaggaggaagaagat 1016 |||||||||| |||||||||||||| Sbjct: 44901 caaggaggacaaggaggaagaagat 44877 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 279,506,879 Number of extensions: 15516613 Number of successful extensions: 387638 Number of sequences better than 10.0: 180 Number of HSP's gapped: 387612 Number of HSP's successfully gapped: 230 Length of query: 1623 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1600 Effective length of database: 18,503,978,556 Effective search space: 29606365689600 Effective search space used: 29606365689600 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
