ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62g07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063730:Os01g0754000 | 36 | 0.022 | 2 | AK108076:Os08g0465300 | 32 | 0.42 | 3 | AK104982:Os03g0100200 | 31 | 0.94 | 4 | AK072547:Os03g0100200 | 31 | 0.94 | 5 | AK107518:Os01g0963800 | 30 | 2.1 | 6 | AK110027: | 29 | 2.7 | 7 | AK106417:Os03g0675300 | 29 | 2.7 | 8 | AK063492:Os01g0238800 | 29 | 2.7 | 9 | AK103499:Os09g0111100 | 29 | 3.6 | 10 | Os06g0224500:Os06g0224500 | 28 | 4.7 | 11 | AK110119: | 28 | 4.7 | 12 | AK064808:Os03g0792400 | 28 | 4.7 | 13 | AK062940:Os01g0238800 | 28 | 4.7 | 14 | Os09g0327500:Os09g0327500 | 28 | 8.0 | 15 | AK121669: | 28 | 8.0 | 16 | AK120832: | 28 | 8.0 | 17 | AK063533:Os04g0163800 | 28 | 8.0 |
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>AK063730:Os01g0754000 | Length = 99 Score = 36.2 bits (82), Expect = 0.022 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +1 Query: 169 SPVVMTSFCVESLMPMHXXXXXXXXXXXXXXXXRTGFGWLTE-GQDE 306 SPV M+S C+E+LMPMH FGWL+E G D+ Sbjct: 52 SPVEMSSVCLETLMPMHSATASALMTSLLAAPACRSFGWLSEAGNDD 98
>AK108076:Os08g0465300 | Length = 223 Score = 32.0 bits (71), Expect = 0.42 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -2 Query: 238 APTPWHCAWASATPHRSWSSPPATLGGRGEQRP 140 +P W C+W A+P R W A G R RP Sbjct: 186 SPRRWSCSWCCASPARWWGRRGALRGTRPGSRP 218
>AK104982:Os03g0100200 | Length = 203 Score = 30.8 bits (68), Expect = 0.94 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 66 CLLSPRGRRQSRPPLWSGSAPEATPGLCSPRPP 164 C+ S GR ++P S S+P +TP L +PRPP Sbjct: 141 CVCSASGRSGTKPAATS-SSPGSTPRLTAPRPP 172
>AK072547:Os03g0100200 | Length = 203 Score = 30.8 bits (68), Expect = 0.94 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 66 CLLSPRGRRQSRPPLWSGSAPEATPGLCSPRPP 164 C+ S GR ++P S S+P +TP L +PRPP Sbjct: 141 CVCSASGRSGTKPAATS-SSPGSTPRLTAPRPP 172
>AK107518:Os01g0963800 | Length = 178 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 9/66 (13%) Frame = +3 Query: 114 SGSAPEATPGLCSPRPPKVAGGDDQLLCGVADAHAQCH---------GVGANDVAPCHPG 266 S +A P L +P P +AG DD G A A H GV A VAP G Sbjct: 51 SAAAGHGLPPLSAPAPAPIAGADDLPAFGRAPKQAPPHFGFPLQPTFGVAAPPVAPTAAG 110 Query: 267 SHWVWL 284 + ++ Sbjct: 111 EGYPFI 116
>AK110027: | Length = 940 Score = 29.3 bits (64), Expect = 2.7 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +3 Query: 111 WSGSAPEATPGLCSPRPP-KVAGGDDQLLCGVADAHAQCHGVGA 239 W+ AP+ P S + P K+A D G+A+ HA H GA Sbjct: 170 WAPPAPKTLPSPSSSKAPRKIARAD-----GIAEVHAGTHAAGA 208
>AK106417:Os03g0675300 | Length = 322 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -2 Query: 232 TPWHCAWASATPHRSWSSPPA 170 +P HC W A P S SSPP+ Sbjct: 181 SPVHCRWEDAKPSTSGSSPPS 201
>AK063492:Os01g0238800 | Length = 95 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +1 Query: 169 SPVVMTSFCVESLMPMHXXXXXXXXXXXXXXXXRTGFGWLTEGQDE 306 SPV + S CVESL+P+H + G GWLTE + + Sbjct: 49 SPVEL-SVCVESLLPLHSATAAARMTSMLAVPGQ-GLGWLTEAETD 92
>AK103499:Os09g0111100 | Length = 364 Score = 28.9 bits (63), Expect = 3.6 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Frame = +3 Query: 99 RPPLWSGSAPEATPGLCSPRPPKVAGGDDQLLCGVADA----HAQCHGVGANDVAPCHPG 266 RP W+ +A AT G C GGDD L + DA A+C + + + A G Sbjct: 226 RPSAWAAAALLATAGWCGG-----GGGDDAELLALIDAPKDEMAECAKIISEEAAAAAAG 280 Query: 267 SHWVWLADRRSG 302 + ++R G Sbjct: 281 GIVIGGENKRKG 292
>Os06g0224500:Os06g0224500 | Length = 1008 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = -1 Query: 263 GVARSDV---ISADAVALCMGISDSTQKLVITTGDLGRTR 153 G+ R D+ ++AD LC G+ + K V GDLG R Sbjct: 487 GIPRPDIATAVAADPRLLCAGVEGNLAKRVAELGDLGIPR 526
>AK110119: | Length = 1001 Score = 28.5 bits (62), Expect = 4.7 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = -2 Query: 253 GATSLAPTPWHCAWASATPHRSWSSPPATLGGRGEQRPGVASGAEP 116 G +L P H +W SA ++ +SP + R QRPG G+EP Sbjct: 664 GGPALLQVPSHGSWRSAEGPQAPASPTSV---RASQRPG-TGGSEP 705
>AK064808:Os03g0792400 | Length = 552 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +3 Query: 78 PRGRRQSRPPLWSGSAPEATPGLCSPRPP 164 P R+SR P WS S P PG SP PP Sbjct: 33 PPPPRRSRAPPWSTSRP---PGSASPGPP 58
>AK062940:Os01g0238800 | Length = 94 Score = 28.5 bits (62), Expect = 4.7 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +1 Query: 169 SPVVMTSFCVESLMPMHXXXXXXXXXXXXXXXXRTGFGWLTEGQDE 306 SPV + S CVESL+P+H + G GWLTE + Sbjct: 49 SPVEL-SVCVESLLPLHSATAAARMTSMLAVPGQ-GLGWLTEADTD 92
>Os09g0327500:Os09g0327500 | Length = 379 Score = 27.7 bits (60), Expect = 8.0 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -2 Query: 289 SANQTQCEPGWQGATSLAPTPWHCAWASATPHRSWSSPPATL------GGRGEQRPGVAS 128 S + T+ P + T P P C + H+ PPAT GG G+ R G Sbjct: 316 SGSDTEAAP--KPKTKPKPKPSSCRFQCVADHKPPPPPPATTSNGGGGGGGGDGRSGEEG 373 Query: 127 GAE 119 G E Sbjct: 374 GKE 376
>AK121669: | Length = 242 Score = 27.7 bits (60), Expect = 8.0 Identities = 23/78 (29%), Positives = 31/78 (39%) Frame = +3 Query: 72 LSPRGRRQSRPPLWSGSAPEATPGLCSPRPPKVAGGDDQLLCGVADAHAQCHGVGANDVA 251 L+P R + P LWS PEA L + R A +++ V A + A Sbjct: 21 LAPSSRAPACPELWSPILPEAADLLGAQRLSGYAAAGARVMAAVRAAASDTKCSERTSAA 80 Query: 252 PCHPGSHWVWLADRRSGR 305 GS + A RRS R Sbjct: 81 RRSQGSPSLRAAPRRSTR 98
>AK120832: | Length = 242 Score = 27.7 bits (60), Expect = 8.0 Identities = 23/78 (29%), Positives = 31/78 (39%) Frame = +3 Query: 72 LSPRGRRQSRPPLWSGSAPEATPGLCSPRPPKVAGGDDQLLCGVADAHAQCHGVGANDVA 251 L+P R + P LWS PEA L + R A +++ V A + A Sbjct: 21 LAPSSRAPACPELWSPILPEAADLLGAQRLSGYAAAGARVMAAVRAAASDTKCSERTSAA 80 Query: 252 PCHPGSHWVWLADRRSGR 305 GS + A RRS R Sbjct: 81 RRSQGSPSLRAAPRRSTR 98
>AK063533:Os04g0163800 | Length = 613 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -3 Query: 576 WEVRSRYHHSRLQQEEIIHLQIETNN 499 W V +R H R ++EE+ + IE +N Sbjct: 474 WRVSTRLSHGRAEEEELARMLIERDN 499 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,028,488 Number of extensions: 413430 Number of successful extensions: 1517 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1516 Number of HSP's successfully gapped: 17 Length of query: 236 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 138 Effective length of database: 11,475,837 Effective search space: 1583665506 Effective search space used: 1583665506 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
