ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf64m04 |
|---|---|
| Clone Library Name | barley_pub |
>Q949P3:Y2734_ARATH Uncharacterized protein At2g17340 - Arabidopsis thaliana (Mouse-ear| cress) Length = 367 Score = 542 bits (1397), Expect = e-153 Identities = 263/357 (73%), Positives = 305/357 (85%) Frame = +1 Query: 211 VPFPLLQAPVESTYRACTIPYRFPSDNPRKATPVEIQWIDLFLKSVPSFRQRAENDPTVP 390 VPFP L P+E+ YRACTIPYRFPSD+P+KATP EI WI++F S+PSF++RAE+D TVP Sbjct: 8 VPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDITVP 67 Query: 391 DAPAKAEKFAQRYTDMLEELKKNPESHGGPPDXXXXXXXXXXXXXXXGFNDIFKKVKDEE 570 DAPA+AEKFA+RY +LE+LKK+PESHGGPPD GF DIFKKVKDEE Sbjct: 68 DAPARAEKFAERYAGILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEE 127 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKDGMSFLASC 750 NAKA+SLF VV +D IED KR ENL+RGI AGNIFDLGSAQLAEVF++DGMSFLASC Sbjct: 128 NAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIFDLGSAQLAEVFSRDGMSFLASC 187 Query: 751 QNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVDNSGADIILGILPFARELLRRGTKVILA 930 QNL+PRPWVIDDL+ F++KW KSW+K VIFVDNSGADIILGILPFARELLRRG +V+LA Sbjct: 188 QNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLA 247 Query: 931 ANDMPSINDITYLELVEIVNKLKDVNGKLAGVDVSDLIVANSGNDLPVIDLSSVAPELAY 1110 AN++PSINDIT EL EI+++LKD NG+L GVD S L++ANSGNDLPVIDLS V+ ELAY Sbjct: 248 ANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAY 307 Query: 1111 MASDADLVVLEGMGRGIETNLYAQMKCDSIKIGMVKHPEVAQFLGGRLYDCVFKFNE 1281 ++SDADLV++EGMGRGIETNLYAQ KCDS+KIGMVKH EVA+FLGGRLYDCVFKFNE Sbjct: 308 LSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNE 364
>Q5R5F8:PANK4_PONPY Pantothenate kinase 4 - Pongo pygmaeus (Orangutan)| Length = 773 Score = 194 bits (492), Expect = 1e-48 Identities = 112/323 (34%), Positives = 186/323 (57%), Gaps = 5/323 (1%) Frame = +1 Query: 322 WIDLFLKSVPSFRQRA-ENDPTVPDAPAKAEKFAQRYTDMLEELKKNPESHGGPPDXXXX 498 W+ F +++ +RA + P DA +AEKF Q+Y + L+ L++ P ++G Sbjct: 448 WLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYG-TLTVRSL 506 Query: 499 XXXXXXXXXXXGFNDIFKKVKDEENAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGN 678 F D + KVK EN A+ F GVV+ D + E+R L++G+LAGN Sbjct: 507 LDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDAL-GWEERQLALVKGLLAGN 565 Query: 679 IFDLGSAQLAEVFAKDG-MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVDNS 855 +FD G+ +++V D F + + L RPW++D + + + +IF DNS Sbjct: 566 VFDWGAKAVSDVLESDPCFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNS 625 Query: 856 GADIILGILPFARELLRRGTKVILAANDMPSINDITYLELVEIVNKLKDVNGKL-AGVDV 1032 G DIILG+ PF RELL RGT+VILA N P++ND+T+ E + + ++ ++ + + + Sbjct: 626 GIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALRE 685 Query: 1033 SDLIVANSGNDLPVIDLSSVAPELAYMASD--ADLVVLEGMGRGIETNLYAQMKCDSIKI 1206 L++ +G+ P +DLS + LA + + ADLVV+EGMGR + TN +A ++C+S+K+ Sbjct: 686 ERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKL 745 Query: 1207 GMVKHPEVAQFLGGRLYDCVFKF 1275 ++K+ +A+ LGGRL+ +FK+ Sbjct: 746 AVIKNAWLAERLGGRLFSVIFKY 768
>Q9NVE7:PANK4_HUMAN Pantothenate kinase 4 - Homo sapiens (Human)| Length = 773 Score = 193 bits (491), Expect = 2e-48 Identities = 112/323 (34%), Positives = 185/323 (57%), Gaps = 5/323 (1%) Frame = +1 Query: 322 WIDLFLKSVPSFRQRA-ENDPTVPDAPAKAEKFAQRYTDMLEELKKNPESHGGPPDXXXX 498 W+ F +++ +RA + P DA +AEKF Q+Y + L+ L++ P ++G Sbjct: 448 WLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYG-TLTVRSL 506 Query: 499 XXXXXXXXXXXGFNDIFKKVKDEENAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGN 678 F D + KVK EN A+ F GVV+ D + E+R L++G+LAGN Sbjct: 507 LDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDAL-GWEERQLALVKGLLAGN 565 Query: 679 IFDLGSAQLAEVFAKDG-MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVDNS 855 +FD G+ ++ V D F + + L RPW++D + + + +IF DNS Sbjct: 566 VFDWGAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNS 625 Query: 856 GADIILGILPFARELLRRGTKVILAANDMPSINDITYLELVEIVNKLKDVNGKL-AGVDV 1032 G DIILG+ PF RELL RGT+VILA N P++ND+T+ E + + ++ ++ + + + Sbjct: 626 GIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQE 685 Query: 1033 SDLIVANSGNDLPVIDLSSVAPELAYMASD--ADLVVLEGMGRGIETNLYAQMKCDSIKI 1206 L++ +G+ P +DLS + LA + + ADLVV+EGMGR + TN +A ++C+S+K+ Sbjct: 686 ERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKL 745 Query: 1207 GMVKHPEVAQFLGGRLYDCVFKF 1275 ++K+ +A+ LGGRL+ +FK+ Sbjct: 746 AVIKNAWLAERLGGRLFSVIFKY 768
>Q4R4U1:PANK4_MACFA Pantothenate kinase 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 773 Score = 191 bits (485), Expect = 8e-48 Identities = 112/323 (34%), Positives = 185/323 (57%), Gaps = 5/323 (1%) Frame = +1 Query: 322 WIDLFLKSVPSFRQRA-ENDPTVPDAPAKAEKFAQRYTDMLEELKKNPESHGGPPDXXXX 498 W+ F +++ +RA + P DA +AEKF Q+Y + L+ L++ P ++G Sbjct: 448 WLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYG-TLTVRSL 506 Query: 499 XXXXXXXXXXXGFNDIFKKVKDEENAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGN 678 F D + KVK EN A+ F GVV+ D + E+R L++G+LAGN Sbjct: 507 LDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDTL-GWEERQLALVKGLLAGN 565 Query: 679 IFDLGSAQLAEVFAKDG-MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVDNS 855 +FD G+ +++V D F + + L RPW++D + + + +IF DNS Sbjct: 566 VFDWGAKAVSDVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNS 625 Query: 856 GADIILGILPFARELLRRGTKVILAANDMPSINDITYLELVEIVNKLKDVNGKL-AGVDV 1032 G DIILG+ PF RELL RGT+VILA N P++ND+T+ E + + ++ ++ + + + Sbjct: 626 GIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHGESLIVAERIAGMDPVVHSALRE 685 Query: 1033 SDLIVANSGNDLPVIDLSSVAPELAYMASD--ADLVVLEGMGRGIETNLYAQMKCDSIKI 1206 L++ +G+ P +DLS + LA + + ADLVV+EGMGR + TN +A + C+S+K+ Sbjct: 686 ERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALCCESLKL 745 Query: 1207 GMVKHPEVAQFLGGRLYDCVFKF 1275 ++K+ +A+ LGGRL+ +FK+ Sbjct: 746 AVIKNAWLAERLGGRLFSVIFKY 768
>Q8L5Y9:PANK2_ARATH Pantothenate kinase 2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 870 Score = 190 bits (482), Expect = 2e-47 Identities = 126/384 (32%), Positives = 196/384 (51%), Gaps = 31/384 (8%) Frame = +1 Query: 217 FPLLQAPVESTYRACTIPYRFPSDNPRKATPVEIQWIDLFLKSVPSFRQRA-ENDPTVPD 393 FPLL P TY TI SD + W+ + + +P A ++ D Sbjct: 494 FPLLADP--KTYEPNTIDL---SDQGERE-----YWLKVLSEHLPDLVDTAVASEGGTED 543 Query: 394 APAKAEKFAQRYTDMLEELKKNPESHGGPPDXXXXXXXXXXXXXXXGFNDIFKKVKDEEN 573 A + + FA+ ++ L L + P ++G F D ++ +K EN Sbjct: 544 AKRRGDAFARAFSAHLARLMEEPAAYG-KLGLANLLELREECLREFQFVDAYRSIKQREN 602 Query: 574 AKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKDGM-SFLASC 750 ++++ +++ D + + E R LI G+LA NIFD GS +++ K + Sbjct: 603 EASLAVLPDLLEELDSMSE-EARLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMS 661 Query: 751 QNLLPRPWVIDDLDTFKSKWTKKSWE------KVVIFVDNSGADIILGILPFARELLRRG 912 +N + RPW +DD D FK + + + ++FVDNSGAD+ILG+LP ARE LRRG Sbjct: 662 RNKMQRPWRVDDFDAFKERMLGSGGKQPHRHKRALLFVDNSGADVILGMLPLAREFLRRG 721 Query: 913 TKVILAANDMPSINDITYLELVEIV----------NKLKDVNGKLAGVDV---------- 1032 T+V+L AN +P++ND+T +EL +IV + ++ G L V Sbjct: 722 TEVVLVANSLPALNDVTAMELPDIVAGAAKHCDILRRAAEMGGLLVDAMVNPGDGSKKDS 781 Query: 1033 --SDLIVANSGNDLPVIDLSSVAPELAYMASDADLVVLEGMGRGIETNLYAQMKCDSIKI 1206 + L+V +G P IDL V+ ELA A DADLVVLEGMGR + TN AQ +C+++K+ Sbjct: 782 TSAPLMVVENGCGSPCIDLRQVSSELAAAAKDADLVVLEGMGRALHTNFNAQFQCEALKL 841 Query: 1207 GMVKHPEVAQ-FLGGRLYDCVFKF 1275 MVK+ +A+ + G +YDCV ++ Sbjct: 842 AMVKNQRLAEKLIKGNIYDCVCRY 865
>Q923S8:PANK4_RAT Pantothenate kinase 4 - Rattus norvegicus (Rat)| Length = 773 Score = 188 bits (477), Expect = 7e-47 Identities = 111/323 (34%), Positives = 182/323 (56%), Gaps = 5/323 (1%) Frame = +1 Query: 322 WIDLFLKSVPSFRQRA-ENDPTVPDAPAKAEKFAQRYTDMLEELKKNPESHGGPPDXXXX 498 W+ F +++ +RA + P DA +AEKF Q+Y L+ L+ P ++G Sbjct: 448 WLTCFEEALDGVVKRAVASQPESVDAAERAEKFRQKYWGKLQTLRHQPFAYG-TLTVRSL 506 Query: 499 XXXXXXXXXXXGFNDIFKKVKDEENAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGN 678 F D + KVK +EN A+ F+ V + D + E+R L++G+LAGN Sbjct: 507 LDTREHCLNEFNFPDPYSKVKQKENGLALKCFQSVTRSLDSL-GWEERQLALVKGLLAGN 565 Query: 679 IFDLGSAQLAEVFAKDGM-SFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVDNS 855 +FD G+ +++V D F + + L RPW++D + + + +IF DNS Sbjct: 566 VFDWGAKAVSDVLESDPQFGFEEAKRKLQERPWLVDSYTKWLQRLKGPPHKCALIFADNS 625 Query: 856 GADIILGILPFARELLRRGTKVILAANDMPSINDITYLELVEIVNKLKDVNGKLAGVDVS 1035 G DIILG+ PF RELL RG +VILA N P++ND+TY E + + ++ ++ + Sbjct: 626 GIDIILGVFPFVRELLCRGIEVILACNSGPALNDVTYSESLIVAERIAAMDPIICTALRE 685 Query: 1036 D-LIVANSGNDLPVIDLSSVAPELAYMASD--ADLVVLEGMGRGIETNLYAQMKCDSIKI 1206 D L++ +G+ P +DLS + LA + + ADLVV+EGMGR + TN +A ++C+S+K+ Sbjct: 686 DRLLLVQTGSSPPCLDLSRLDKGLAVLVRERGADLVVIEGMGRAVHTNYHALLRCESLKL 745 Query: 1207 GMVKHPEVAQFLGGRLYDCVFKF 1275 +VK+ +A+ LGG+L+ +FK+ Sbjct: 746 AVVKNAWLAERLGGQLFSVIFKY 768
>Q80YV4:PANK4_MOUSE Pantothenate kinase 4 - Mus musculus (Mouse)| Length = 820 Score = 164 bits (414), Expect = 1e-39 Identities = 110/370 (29%), Positives = 183/370 (49%), Gaps = 52/370 (14%) Frame = +1 Query: 322 WIDLFLKSVPSFRQRA-ENDPTVPDAPAKAEKFAQRYTDMLEELKKNPESHGGPPDXXXX 498 W+ F +++ +RA + P DA +AEKF Q+Y L+ L+ P ++G Sbjct: 448 WLTCFEEALDGVVKRAVASQPESMDAVERAEKFRQKYWGKLQTLRHQPFAYG-TLTVRSL 506 Query: 499 XXXXXXXXXXXGFNDIFKKVKDEENAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGN 678 F D + KVK +EN A+ F+ V + D + E+R L++G+LAGN Sbjct: 507 LDTREHCLNEFNFPDPYSKVKQKENGLALKCFQSVTRSLDSL-GWEERQLALVKGLLAGN 565 Query: 679 IFDLGSAQLAEVFAKDGM-SFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVDNS 855 +FD G+ +++V D F + + L RPW++D + + + +IF DNS Sbjct: 566 VFDWGAKAVSDVLESDPQFGFEEAKRKLQERPWLVDSYTKWLQRLKGPPHKCALIFADNS 625 Query: 856 GADIILGILPFARELLRRGTKVILAANDMPSINDITYLELVEIVNKLKDVNGKLAGVDVS 1035 G DIILG+ PF RELL RGT+VILA N P++ND+TY E + + ++ ++ + Sbjct: 626 GIDIILGVFPFVRELLFRGTEVILACNSGPALNDVTYSESLIVAERIAAMDPIICTALRE 685 Query: 1036 D-LIVANSGNDLPVIDLS----------------------------------SVAPELAY 1110 D L++ +G+ P +DLS S+ + Sbjct: 686 DRLLLVQTGSSSPCLDLSLCTSRTTTCMVLPFAMWVLWTKLKSLVEKCLSPLSILLACSV 745 Query: 1111 MASDADL---------------VVLEGMGRGIETNLYAQMKCDSIKIGMVKHPEVAQFLG 1245 +++ + L VV+EGMGR I TN +A ++C+S+K+ +VK+ +A+ LG Sbjct: 746 LSAKSRLDKGLAVLVRERGADLVVIEGMGRAIHTNYHALLRCESLKLAVVKNAWLAERLG 805 Query: 1246 GRLYDCVFKF 1275 G+L+ +FK+ Sbjct: 806 GQLFSVIFKY 815
>Q57655:Y202_METJA Uncharacterized protein MJ0202 - Methanococcus jannaschii| Length = 304 Score = 49.3 bits (116), Expect = 5e-05 Identities = 46/205 (22%), Positives = 92/205 (44%) Frame = +1 Query: 538 NDIFKKVKDEENAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVF 717 ND +K +K++ N A+ + V + ++ ++ E+ + ++ I AGN+ D G+ Sbjct: 80 NDPYKNLKEKANKIALQYLDKVREMSNTDDELERLRKKVLATI-AGNVIDFGAYST---- 134 Query: 718 AKDGMSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVDNSGADIILGILPFARE 897 G++ ++ L ID+ + K+ +K++ DN+G I +L E Sbjct: 135 ---GINIEKLIEDTLNGELKIDNSRKLLNDLKDKNIKKILYICDNAGEIIFDRVL--MEE 189 Query: 898 LLRRGTKVILAANDMPSINDITYLELVEIVNKLKDVNGKLAGVDVSDLIVANSGNDLPVI 1077 + + ++ P +ND T L+D K+A +D ++ +G+D+ I Sbjct: 190 IKKYDKDIVAVVKGKPILNDAT----------LEDA--KIAKIDEIAKVIT-TGSDIIGI 236 Query: 1078 DLSSVAPELAYMASDADLVVLEGMG 1152 L + E ADL++ +GMG Sbjct: 237 ILEECSEEFLKEFESADLIIAKGMG 261
>Q89607:ENV_HV2EH Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate EHO subtype B) (HIV-2) Length = 852 Score = 39.7 bits (91), Expect = 0.041 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +L G+VQ+ ++ D KR + L+R + G E + KD G Sbjct: 535 SAQSRTLLAGIVQQQQQLVDVVKRQQELLRLTVWGTKNLQARVTAIEKYLKDQAQLNSWG 594 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C +P WV + L + T + WE+ V F+D Sbjct: 595 CAFRQVCHTTVP--WVNESLKPDWNNMTWQQWERQVRFLD 632
>P18040:ENV_HV2G1 Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate Ghana-1 subtype A) (HIV-2) Length = 851 Score = 38.9 bits (89), Expect = 0.070 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +L G+VQ+ ++ D KR + ++R + G E + KD G Sbjct: 528 SAQSRTLLAGIVQQQQQLLDVVKRQQEMLRLTVWGTKNLQARVTAIEKYLKDQAQLNSWG 587 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C +P WV D L + T + WEK V +++ Sbjct: 588 CAFRQVCHTTVP--WVNDSLSPDWNNMTWQEWEKQVRYLE 625
>P17755:ENV_HV2D1 Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate D194 subtype A) (HIV-2) Length = 851 Score = 38.1 bits (87), Expect = 0.12 Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +L G+VQ+ ++ D KR + ++R + G E + KD G Sbjct: 527 SAQSRTLLAGIVQQQQQLLDVVKRQQEMLRLTVWGTKNLQARVTAIEKYLKDQAQLNSWG 586 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C +P WV D L + T + WEK V +++ Sbjct: 587 CAFRQVCHTTVP--WVNDSLTPDWNNMTWQEWEKRVHYLE 624
>P12449:ENV_HV2SB Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate SBLISY subtype A) (HIV-2) Length = 846 Score = 37.0 bits (84), Expect = 0.27 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +LF G+VQ+ ++ D KR + ++R + G E + D G Sbjct: 529 SAQSRTLFRGIVQQQQQLLDVVKRQQEMLRLTVWGTKNLQARVTAIEKYLADQARLNSWG 588 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C + PWV D L + T + WE + F++ Sbjct: 589 CAFRQVCHTTV--PWVNDTLTPEWNNMTWQEWEHKIRFLE 626
>P04577:ENV_HV2RO Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate ROD subtype A) (HIV-2) Length = 858 Score = 37.0 bits (84), Expect = 0.27 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +L G+VQ+ ++ D KR + L+R + G E + +D G Sbjct: 537 SAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQARVTAIEKYLQDQARLNSWG 596 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C +P WV D L T + WEK V +++ Sbjct: 597 CAFRQVCHTTVP--WVNDSLAPDWDNMTWQEWEKQVRYLE 634
>Q76638:ENV_HV2UC Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate UC1 subtype B) (HIV-2) Length = 857 Score = 36.2 bits (82), Expect = 0.45 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +L G+VQ+ ++ D KR + L+R + G E + KD G Sbjct: 540 SAQSRTLLAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQALLNSWG 599 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C +P W + L T + WEK V F+D Sbjct: 600 CAFRQVCHTTVP--WPNETLTPDWENMTWQQWEKRVNFLD 637
>P05883:ENV_HV2NZ Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate NIH-Z subtype A) (HIV-2) Length = 856 Score = 36.2 bits (82), Expect = 0.45 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +L G+VQ+ ++ D KR + ++R + G E + KD G Sbjct: 528 SAQSRTLLAGIVQQQQQLLDVVKRQQEMLRLTVWGTKNLQARVTAIEKYLKDQAQLNSWG 587 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C +P WV D L + T + WE+ V +++ Sbjct: 588 CAFRQVCHTSVP--WVNDTLTPDWNNMTWQEWEQKVRYLE 625
>P15831:ENV_HV2D2 Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate D205 subtype B) (HIV-2) Length = 859 Score = 36.2 bits (82), Expect = 0.45 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +L G+VQ+ + D KR + L+R + G E + KD G Sbjct: 539 SAQSRTLLAGIVQQQQQPVDVVKRQQELLRLTVWGTKNLQARVTAIEKYLKDQAQLNSWG 598 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C +P W + L + T + WEK V F+D Sbjct: 599 CAFRQVCHTTVP--WPNETLTPNWNNMTWQQWEKQVHFLD 636
>P18094:ENV_HV2BE Envelope glycoprotein gp160 precursor - Human immunodeficiency| virus type 2 (isolate BEN subtype A) (HIV-2) Length = 860 Score = 35.8 bits (81), Expect = 0.59 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 7/100 (7%) Frame = +1 Query: 571 NAKAMSLFEGVVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQLAEVFAKD-------G 729 +A++ +L G+VQ+ ++ D KR + ++R + G E + K G Sbjct: 536 SAQSRTLLAGIVQQQQQLLDVVKRQQEMLRLTVWGTKNLQARVTAIEKYLKHQAQLNSWG 595 Query: 730 MSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVD 849 +F C +P WV D L T + WEK V +++ Sbjct: 596 CAFRQVCHTTVP--WVNDSLSPDWKNMTWQEWEKQVRYLE 633
>P39224:Y06Q_BPT4 Uncharacterized 22.0 kDa protein in e-segB intergenic region -| Bacteriophage T4 Length = 197 Score = 34.3 bits (77), Expect = 1.7 Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 6/181 (3%) Frame = +1 Query: 544 IFKKVKDEENAKAMSLFEG------VVQRNDEIEDAEKRAENLIRGILAGNIFDLGSAQL 705 + K+KD + A S+ E +V++N + E E+ L L Q Sbjct: 36 LLDKIKDLKTASVKSINEEKRIRELIVEKNKQAESKEREIRKL-----------LSEGQD 84 Query: 706 AEVFAKDGMSFLASCQNLLPRPWVIDDLDTFKSKWTKKSWEKVVIFVDNSGADIILGILP 885 + AK G+ + + + L + D + + KK V+ +D++ ++ + L Sbjct: 85 VTMHAKLGLLYRRTAEQLTTKA---DGYAEMRIEIAKK-----VVELDDARQELAVK-LE 135 Query: 886 FARELLRRGTKVILAANDMPSINDITYLELVEIVNKLKDVNGKLAGVDVSDLIVANSGND 1065 + RE I A+D+ I +T +++ + + +++ NG ++GV+ + V N Sbjct: 136 YIRETRAANALGISTADDVVEIAALTKVDIEDTLARVETFNGNISGVETTSADVQEYINS 195 Query: 1066 L 1068 L Sbjct: 196 L 196
>Q72DW3:COBQ_DESVH Cobyric acid synthase - Desulfovibrio vulgaris (strain Hildenborough| / ATCC 29579 / NCIMB 8303) Length = 543 Score = 33.5 bits (75), Expect = 2.9 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +1 Query: 1111 MASDADLVVLEGMGRGIETNLYAQMKCDSIKIGMVKHPEVAQFLGG 1248 +A+D D++VLEG G E NL A D + + M +H E L G Sbjct: 125 LAADVDVMVLEGAGSPAEVNLKAH---DIVNMAMARHAEAKVLLVG 167
>Q9P7R0:ARO1_SCHPO Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase| - Schizosaccharomyces pombe (Fission yeast) Length = 1573 Score = 32.7 bits (73), Expect = 5.0 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 20/172 (11%) Frame = +1 Query: 823 WEKVVIFVDNSGADIILGILPFARELLRRGTKVILAANDMPSINDITYLE-----LVEIV 987 W+ + ++VD + L LP R+++ G I+ M + ND LE L++ + Sbjct: 168 WQPLRVYVDM----VFLHTLP-PRQVIN-GLSEIIKTAAMWNENDFQLLENNSAVLLDAL 221 Query: 988 NKLKDVNGKLAGVDVSDLIVANSGNDLPVIDLSSVAPELAYMASDADLVVLEGM------ 1149 NK V G+ + L L I LSS+ + + D L + Sbjct: 222 NK-PSVPGEYKFDSIKPL--------LQKIILSSIRTKCEVVTLDEHEGGLRNLLNFGHS 272 Query: 1150 -GRGIETNLYAQ-MKCDSIKIGMVKHPEVAQFLG-------GRLYDCVFKFN 1278 G E LY Q + + + IGMVK E+A++LG GRL C+ +N Sbjct: 273 IGHAYEAILYPQILHGECVAIGMVKEAELARYLGILKPNAVGRLTKCLVSYN 324
>Q6BM04:SET2_DEBHA Histone-lysine N-methyltransferase, H3 lysine-36 specific -| Debaryomyces hansenii (Yeast) (Torulaspora hansenii) Length = 731 Score = 32.3 bits (72), Expect = 6.6 Identities = 17/59 (28%), Positives = 32/59 (54%) Frame = +1 Query: 292 PRKATPVEIQWIDLFLKSVPSFRQRAENDPTVPDAPAKAEKFAQRYTDMLEELKKNPES 468 P P++ QW F K VP+F ++ E + + A++ + T + +E+KKNP++ Sbjct: 621 PAPPVPIDGQWTKTFAKHVPNFLKKYEAEIGRDNIKGCAKELVK--TLVAKEMKKNPDT 677
>Q492C0:RPOC_BLOPB DNA-directed RNA polymerase beta' chain - Blochmannia pennsylvanicus| (strain BPEN) Length = 1416 Score = 32.3 bits (72), Expect = 6.6 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 6/94 (6%) Frame = +1 Query: 811 TKKSWEKV-----VIFVDNSGADIILGILPFAREL-LRRGTKVILAANDMPSINDITYLE 972 TKK+ EKV V + D +I + F + + L G ++ +++ + I L+ Sbjct: 1008 TKKNEEKVIHGEIVAYWDPHTMPVIAEVSGFIQFIDLIDGQSIVKQTDELTGLTSIVVLD 1067 Query: 973 LVEIVNKLKDVNGKLAGVDVSDLIVANSGNDLPV 1074 E V+ KD+ L VD++ + G D+PV Sbjct: 1068 TSERVSSAKDLRPTLKIVDINGYDIFIPGTDVPV 1101
>Q898L6:MSCL_CLOTE Large-conductance mechanosensitive channel - Clostridium tetani| Length = 133 Score = 32.0 bits (71), Expect = 8.6 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +1 Query: 325 IDLFLKSVPSFRQRAENDPTVPDAPAKAEKFAQRYTDMLEELK 453 I LF+K + SF+++ E P V + P+K EK D+L+E K Sbjct: 92 IFLFVKLINSFKKKEEEKPKV-EEPSKEEKLLAEIRDILKESK 133
>Q7SA35:ALG10_NEUCR Alpha-1,2 glucosyltransferase alg-10 - Neurospora crassa| Length = 770 Score = 32.0 bits (71), Expect = 8.6 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 9/107 (8%) Frame = -1 Query: 962 VMSLMEGMSLAASMTLVPRRSNSLANGNMPNMI---------SAPELSTKITTFSQDFLV 810 +M L G ++ +SN +A ++P M+ SAP L ++ + D + Sbjct: 328 IMGLFAGFVAWNGGVVLGDKSNHIATIHLPQMLYIWPFFAFFSAPLLIPRVLSTLADLIT 387 Query: 809 HLLLNVSRSSITQGRGNRFWQLAKKDIPSLAKTSASCADPRSNMFPA 669 H + T+ G W+ K I S K+S + RS PA Sbjct: 388 HARTPTPSHTTTKDPGRSSWRFTKPSITS-KKSSTTKPPQRSGPTPA 433 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 286,508,589 Number of extensions: 5995287 Number of successful extensions: 15464 Number of sequences better than 10.0: 24 Number of HSP's gapped: 15429 Number of HSP's successfully gapped: 25 Length of query: 592 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 473 Effective length of database: 68,045,334 Effective search space: 32185442982 Effective search space used: 32185442982 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
