ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf62e20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK108206:Os07g0115500 | 64 | 2e-10 | 2 | AK103002:Os03g0762500 | 57 | 1e-08 | 3 | AK066494:Os03g0206400 | 37 | 0.013 | 4 | AK107011:Os03g0206400 | 36 | 0.037 | 5 | AK063135:Os01g0288200 | 29 | 4.5 | 6 | AK121463:Os05g0459300 | 28 | 5.8 | 7 | AK119604:Os05g0459300 | 28 | 5.8 | 8 | AK062312:Os05g0459300 | 28 | 5.8 | 9 | AK070628:Os09g0448100 | 28 | 7.6 | 10 | AK070293:Os09g0448100 | 28 | 7.6 | 11 | AK108203:Os08g0241300 | 28 | 7.6 | 12 | AK120337:Os03g0806800 | 28 | 9.9 | 13 | AK066544:Os07g0102100 | 28 | 9.9 | 14 | AK061623:Os03g0806800 | 28 | 9.9 |
|---|
>AK108206:Os07g0115500 | Length = 94 Score = 63.5 bits (153), Expect = 2e-10 Identities = 31/60 (51%), Positives = 35/60 (58%) Frame = +2 Query: 206 LRRAAVPVKRVWXXXXXXXXXXXXXXXXXXXXEVRTCEYDDVHVMWELLSGMDGSAPRKY 385 L RAAVPVKRVW EVRTCEY DVHVMWE+LS MD +AP ++ Sbjct: 5 LGRAAVPVKRVWLGLSARLGLRRTTGLGKLRNEVRTCEYSDVHVMWEMLSSMDAAAPPRH 64
>AK103002:Os03g0762500 | Length = 94 Score = 57.4 bits (137), Expect = 1e-08 Identities = 27/58 (46%), Positives = 30/58 (51%) Frame = +2 Query: 203 CLRRAAVPVKRVWXXXXXXXXXXXXXXXXXXXXEVRTCEYDDVHVMWELLSGMDGSAP 376 C+ RAAVPVKRVW EVRTCEY DVH+MWE+L D P Sbjct: 2 CMDRAAVPVKRVWLGLAARLGLRRTSGLGKLKKEVRTCEYHDVHIMWEMLRKTDAPVP 59
>AK066494:Os03g0206400 | Length = 91 Score = 37.4 bits (85), Expect = 0.013 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = +2 Query: 212 RAAVPVKRVWXXXXXXXXXXXXXXXXXXXXEVRTCEYDDVHVMWELLS 355 R +PV+R W EV TCEY+DV VMWE+LS Sbjct: 7 RVVLPVRRAWLGVAARFGVRQTGLWRLRQ-EVSTCEYEDVRVMWEMLS 53
>AK107011:Os03g0206400 | Length = 96 Score = 35.8 bits (81), Expect = 0.037 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = +2 Query: 302 EVRTCEYDDVHVMWELLS 355 EV TCEY+DV VMWE+LS Sbjct: 41 EVSTCEYEDVRVMWEMLS 58
>AK063135:Os01g0288200 | Length = 80 Score = 28.9 bits (63), Expect = 4.5 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +2 Query: 302 EVRTCEYDDVHVMWELL 352 EV C Y+DV VMW++L Sbjct: 53 EVMACAYEDVQVMWDML 69
>AK121463:Os05g0459300 | Length = 336 Score = 28.5 bits (62), Expect = 5.8 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -3 Query: 653 LLHHIIAARGQERRERIHRSRKHPFQTRASGEAARRLGS 537 L HH+ R RR R+H R+ TR G A LGS Sbjct: 225 LPHHLRLRRPPPRRRRLHVRRRPQEDTRVRGGAQGFLGS 263
>AK119604:Os05g0459300 | Length = 336 Score = 28.5 bits (62), Expect = 5.8 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -3 Query: 653 LLHHIIAARGQERRERIHRSRKHPFQTRASGEAARRLGS 537 L HH+ R RR R+H R+ TR G A LGS Sbjct: 225 LPHHLRLRRPPPRRRRLHVRRRPQEDTRVRGGAQGFLGS 263
>AK062312:Os05g0459300 | Length = 336 Score = 28.5 bits (62), Expect = 5.8 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -3 Query: 653 LLHHIIAARGQERRERIHRSRKHPFQTRASGEAARRLGS 537 L HH+ R RR R+H R+ TR G A LGS Sbjct: 225 LPHHLRLRRPPPRRRRLHVRRRPQEDTRVRGGAQGFLGS 263
>AK070628:Os09g0448100 | Length = 380 Score = 28.1 bits (61), Expect = 7.6 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = -3 Query: 209 EGRGTTCCECFFI*RASELSTLECEDCSAGR 117 E G CC CFF SE LE +CS G+ Sbjct: 263 EVEGELCCACFF----SETLALEIWNCSGGQ 289
>AK070293:Os09g0448100 | Length = 380 Score = 28.1 bits (61), Expect = 7.6 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = -3 Query: 209 EGRGTTCCECFFI*RASELSTLECEDCSAGR 117 E G CC CFF SE LE +CS G+ Sbjct: 263 EVEGELCCACFF----SETLALEIWNCSGGQ 289
>AK108203:Os08g0241300 | Length = 91 Score = 28.1 bits (61), Expect = 7.6 Identities = 10/18 (55%), Positives = 16/18 (88%) Frame = +2 Query: 302 EVRTCEYDDVHVMWELLS 355 +V+TC+Y DV VM+E+L+ Sbjct: 40 DVQTCDYKDVQVMFEMLT 57
>AK120337:Os03g0806800 | Length = 64 Score = 27.7 bits (60), Expect = 9.9 Identities = 8/17 (47%), Positives = 15/17 (88%) Frame = +2 Query: 302 EVRTCEYDDVHVMWELL 352 +V++C+ +DVHV+W +L Sbjct: 34 DVKSCQDEDVHVLWSIL 50
>AK066544:Os07g0102100 | Length = 808 Score = 27.7 bits (60), Expect = 9.9 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = -2 Query: 753 GCRAACIYNSEHIRIRKSTLALAHHLSLRLPTVAASSYHSCTRSRAKREDSSISKTSFPN 574 G RA C++ S +T A H S P+ AAS+ + T S A SS + +S P+ Sbjct: 8 GGRARCVWPSSASASSTATSAPPHSTSTPPPSTAASA--TPTTSSASSPSSSTASSSSPS 65
>AK061623:Os03g0806800 | Length = 64 Score = 27.7 bits (60), Expect = 9.9 Identities = 8/17 (47%), Positives = 15/17 (88%) Frame = +2 Query: 302 EVRTCEYDDVHVMWELL 352 +V++C+ +DVHV+W +L Sbjct: 34 DVKSCQDEDVHVLWSIL 50 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,605,923 Number of extensions: 351394 Number of successful extensions: 1187 Number of sequences better than 10.0: 14 Number of HSP's gapped: 1179 Number of HSP's successfully gapped: 15 Length of query: 272 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 173 Effective length of database: 11,435,796 Effective search space: 1978392708 Effective search space used: 1978392708 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
