>LOC_Os05g07040:12005.t00593:unspliced-genomic PHD finger protein, putative, expressed|
Length = 4631
Score = 177 bits (381), Expect(5) = e-110
Identities = 72/78 (92%), Positives = 73/78 (93%)
Frame = +1 / +1
Query: 253 EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLV 432
EKENLCLYGYANEAW+VALPAEEVPTELPEPALGINFARDGM R DWLALVAVHSDSWLV
Sbjct: 469 EKENLCLYGYANEAWQVALPAEEVPTELPEPALGINFARDGMNRRDWLALVAVHSDSWLV 648
Query: 433 SVAFYYAARLTRNDRKRL 486
SVAFYYAARL RNDR L
Sbjct: 649 SVAFYYAARLNRNDRYAL 702
Score = 165 bits (355), Expect(5) = e-110
Identities = 63/79 (79%), Positives = 65/79 (82%)
Frame = +1 / +1
Query: 634 RAENNAREAXXXXXXXXXXHSETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKA 813
R ENN +E HSETLCGTCGGIYSA+EFWIGCDVCERWYHGKCVKITPAKA
Sbjct: 3988 RVENNIKEEDEGYDEDDGDHSETLCGTCGGIYSADEFWIGCDVCERWYHGKCVKITPAKA 4167
Query: 814 EGIKQYKCPSCSSKRPRQ* 870
E IKQYKCPSCSSKRPRQ*
Sbjct: 4168 ESIKQYKCPSCSSKRPRQ* 4224
Score = 72.5 bits (152), Expect(5) = e-110
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +1 / +3
Query: 472 DRKRLFGMMNDLPTVYEVISGMRQSKERDRSG 567
+RKRLFGMMNDLPTVYEV+SG RQSKERDRSG
Sbjct: 3756 NRKRLFGMMNDLPTVYEVVSGSRQSKERDRSG 3851
Score = 51.5 bits (106), Expect(5) = e-110
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +1 / +3
Query: 148 PRTVEDIFKDYRARRNAIHRALTHDVEEFYAQCDPEKEN 264
PR+VEDIFKD+RARR AI RALTH P N
Sbjct: 177 PRSVEDIFKDFRARRTAILRALTHGTPAVEPSLSPRNPN 293
Score = 26.3 bits (51), Expect(5) = e-110
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 568 GIDNSGRNKLPSKHT 612
G+DNS RNK+ SK T
Sbjct: 3849 GMDNSSRNKISSKVT 3893
Score = 105 bits (224), Expect(5) = 3e-53
Identities = 42/57 (73%), Positives = 43/57 (75%)
Frame = -3 / -1
Query: 869 YCXXXXXXXXXXLYCFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
YC LYCFM SAFAGVI THLPWYHLSHTS PIQNSSALY+PP VPHRV
Sbjct: 4223 YCLGLLELQLGHLYCFMLSAFAGVILTHLPWYHLSHTSQPIQNSSALYIPPQVPHRV 4053
Score = 86.8 bits (183), Expect(5) = 3e-53
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -3 / -1
Query: 485 KRFRSLRVSRAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
+ +RSLR+ RAA**KATETSHESEWTATSASQS RF+PSRAKLIP
Sbjct: 701 RAYRSLRLRRAA**KATETSHESEWTATSASQSRRFIPSRAKLIP 567
Score = 52.4 bits (108), Expect(5) = 3e-53
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 585 TAVVNTTRSVPLLRLSHA*DDFIHGWQIIHHAK*TLPV 472
+A V SVPLLRLS DF++ WQIIHHAK TLPV
Sbjct: 3869 SAAVVHAGSVPLLRLS*TRYDFVNSWQIIHHAKQTLPV 3756
Score = 30.4 bits (60), Expect(5) = 3e-53
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -1
Query: 284 AYPYRHKFSFS 252
AYPYRH+FSFS
Sbjct: 500 AYPYRHRFSFS 468
Score = 25.8 bits (50), Expect(5) = 3e-53
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 260 SFSGSHCA*NSSTS 219
S GSHCA* SSTS
Sbjct: 380 SSPGSHCA*KSSTS 339
Score = 94.5 bits (200), Expect(5) = 2e-44
Identities = 50/80 (62%), Positives = 53/80 (66%)
Frame = -2 / -3
Query: 873 LLLPRSLGAAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAVYAAACPT*GLX 694
LLL RSLGAAA A VLLYALRLR S L ALA+VPPLAHVA DPE +GAVY A P *GL
Sbjct: 4227 LLLSRSLGAAARALVLLYALRLRRSDLDALAVVPPLAHVAADPELVGAVYPTASPA*GLT 4048
Query: 693 XXXXXXXXXXVGLPGIIFCT 634
+ L IIF T
Sbjct: 4047 VVAIVLVVAFIFLLDIIFDT 3988
Score = 83.1 bits (175), Expect(5) = 2e-44
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -2 / -3
Query: 480 LPVVASEPRGIVEGYGDKPRIGVDGDEREPVAALHAVARKVDPE 349
+PVVA E RG+VEG GD+PR+GVDGDEREPVAA+H VA +VDPE
Sbjct: 696 VPVVAVEARGVVEGDGDEPRVGVDGDEREPVAAVHPVAGEVDPE 565
Score = 45.1 bits (92), Expect(5) = 2e-44
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -1 / -3
Query: 589 FYRCCQYHPICPSPSIVSCLR*LHTRLANHSSCQINAS 476
++ CC ICPSP IV L +LANHSSCQ NAS
Sbjct: 3873 YFCCCCPCRICPSP*IVLNQIRLRKQLANHSSCQTNAS 3760
Score = 24.0 bits (46), Expect(5) = 2e-44
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 288 VGVPVQAQVLLL 253
V VPVQAQ+LLL
Sbjct: 504 VRVPVQAQILLL 469
Score = 24.0 bits (46), Expect(5) = 2e-44
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 258 LLWIALRVELL 226
L WIALRVE+L
Sbjct: 378 LTWIALRVEIL 346
Score = 90.9 bits (192), Expect(6) = 4e-33
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = +3 / +3
Query: 687 RPQRDPMWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAVQMPKLQLQET*A 866
RPQ DPM D+R IQRR +LD EVVP QVR+D+S EGG HKAVQ+P+LQLQET*
Sbjct: 4041 RPQ*DPMRDLRWDIQRRRVLDRLRRVREVVPRQVRQDHSGEGGEHKAVQVPELQLQET*T 4220
Query: 867 VAA 875
V A
Sbjct: 4221 VVA 4229
Score = 45.5 bits (93), Expect(6) = 4e-33
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3 / +2
Query: 477 EAFIWHDE*FANRV*SHLRHETIEGEGQI 563
EAF+WHDE*FAN + S + +TI GEGQI
Sbjct: 3761 EAFVWHDE*FANCLRSRIWFKTI*GEGQI 3847
Score = 33.6 bits (67), Expect(6) = 4e-33
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 422 RGLSP*PSTMPRGSLATTGS 481
RG SP PST PR S ATTG+
Sbjct: 638 RGSSPSPSTTPRASTATTGT 697
Score = 30.9 bits (61), Expect(6) = 4e-33
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 220 DVEEFYAQCDP 252
DVE+FYAQCDP
Sbjct: 340 DVEDFYAQCDP 372
Score = 26.7 bits (52), Expect(6) = 4e-33
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 132 RRRLSPPHCRGHLQGL 179
RRR P RGHLQGL
Sbjct: 161 RRRFRPSLRRGHLQGL 208
Score = 23.5 bits (45), Expect(6) = 4e-33
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 636 CRK*CQGGRRRL 671
CRK* QGGR RL
Sbjct: 3990 CRK*YQGGR*RL 4025
Score = 85.8 bits (181), Expect(2) = 6e-23
Identities = 43/80 (53%), Positives = 47/80 (58%)
Frame = +2 / +2
Query: 635 VQKIMPGRPXXXXXXXXXXXXRPYVGHAAAYTAPRNSGSGATCARGGTMASAXXXXXXXX 814
V KI+ R RPY G A YTAP +SGS ATCARGGT ASA
Sbjct: 3989 VSKIISRRKMKATTRTMATTVRPYAGLAVGYTAPTSSGSAATCARGGTTASASRSLRRRR 4168
Query: 815 XA*SSTNAQAAAPRDLGSSS 874
A*SST+A+AAAPRDL SSS
Sbjct: 4169 RA*SSTSARAAAPRDLDSSS 4228
Score = 42.3 bits (86), Expect(2) = 6e-23
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +2 / +1
Query: 470 TTGSVYLA**MICQPCMKSSQA*DNRRRGTDRVVLTTA 583
+TGSV LA**MICQ KS DN RRGTD T A
Sbjct: 3754 STGSVCLA**MICQLFTKSYLVQDNLRRGTDPAWTTAA 3867
Score = 48.3 bits (99), Expect(3) = 1e-11
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = -1 / -2
Query: 874 AATA*VSWSCSLGICTALCPPPSLE 800
A T *VSWSCS G CTALC PPS E
Sbjct: 4228 ATTV*VSWSCSSGTCTALCSPPSPE 4154
Score = 45.1 bits (92), Expect(3) = 1e-11
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -3 / -2
Query: 542 CLMPEMTSYTVGKSFIMPNKRF 477
CL P+ TS TVGKSFIMPNKRF
Sbjct: 3826 CLEPDTTS*TVGKSFIMPNKRF 3761
Score = 24.0 bits (46), Expect(3) = 1e-11
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -3 / -2
Query: 257 FSGSHCA*NSSTSWVXXXXXXXXXXX*SLKMSSTVRG 147
F G + WV SLKMSST RG
Sbjct: 286 FRGEREGSTAGVPWVRARRMAVRRARKSLKMSSTERG 176
>LOC_Os03g60390:12003.t05278:unspliced-genomic PHD finger protein, putative, expressed|
Length = 3833
Score = 155 bits (334), Expect(5) = 1e-81
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +1 / +2
Query: 253 EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLV 432
+KENLCLYG AN +WEVALPAEEVP ELPEPALGINFARDGM R DWL+LVAVHSDSWLV
Sbjct: 515 DKENLCLYGLANGSWEVALPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLV 694
Query: 433 SVAFYYAARLTRNDR 477
SVAF++AARL N+R
Sbjct: 695 SVAFFFAARLNGNER 739
Score = 130 bits (278), Expect(5) = 1e-81
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +1 / +1
Query: 691 HSETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAEGIKQYKCPSCSSKRPRQ 867
H+ET CGTCGG+Y+A EFWIGCD+CERW+HGKCV+ITPAKAE IK YKCP CSS ++
Sbjct: 3061 HNETFCGTCGGLYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSSSKK 3237
Score = 46.0 bits (94), Expect(5) = 1e-81
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 148 PRTVEDIFKDYRARRNAIHRALT 216
PRTVEDIFKDY ARR A+ RALT
Sbjct: 154 PRTVEDIFKDYSARRGALVRALT 222
Score = 40.5 bits (82), Expect(5) = 1e-81
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1 / +2
Query: 475 RKRLFGMMNDLPTVYEVISGMRQSKER 555
RKRLF M+NDLPTVYE + + ++R
Sbjct: 2789 RKRLFNMINDLPTVYEALVDRKHVRDR 2869
Score = 24.0 bits (46), Expect(5) = 1e-81
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 220 DVEEFYAQCDP 252
DV+EF+ CDP
Sbjct: 351 DVDEFFGLCDP 383
Score = 73.0 bits (153), Expect(5) = 8e-30
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = -3 / -3
Query: 479 FRSLRVSRAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
+RS +SRAA KATETSHESEWTAT SQS RF+PSRAKL+P
Sbjct: 741 YRSFPLSRAAKKKATETSHESEWTATRESQSRRFIPSRAKLMP 613
Score = 70.3 bits (147), Expect(5) = 8e-30
Identities = 29/43 (67%), Positives = 29/43 (67%)
Frame = -3 / -1
Query: 827 CFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
C M SA AGVI THLPW H S SHPIQNS AL PP VP V
Sbjct: 3197 CLMCSALAGVILTHLPWNHRSQMSHPIQNSFAL*RPPQVPQNV 3069
Score = 26.7 bits (52), Expect(5) = 8e-30
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 287 LAYPYRHKFSFS 252
LA PYRHKFS S
Sbjct: 549 LARPYRHKFSLS 514
Score = 25.4 bits (49), Expect(5) = 8e-30
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -2
Query: 856 SWSCSLGICTALCPPP 809
S CS G C+A C PP
Sbjct: 3226 SCCCSQGTCSA*CAPP 3179
Score = 24.0 bits (46), Expect(5) = 8e-30
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 176 SLKMSSTVRG 147
SLKMSSTVRG
Sbjct: 182 SLKMSSTVRG 153
Score = 68.4 bits (143), Expect(2) = 4e-17
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = -2 / -2
Query: 480 LPVVASEPRGIVEGYGDKPRIGVDGDEREPVAALHAVARKVDPE 349
+P V+ EPRG EG GD+PR+GVDGDE EPV A+H VA +VD E
Sbjct: 742 VPFVSVEPRGEEEGDGDEPRVGVDGDEGEPVPAVHPVAGEVDAE 611
Score = 45.5 bits (93), Expect(2) = 4e-17
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = -2 / -3
Query: 849 AAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAVYAAA 715
AA A V+L LRL Y A A+ PPL VAPDPE + V A A
Sbjct: 3219 AAVRALVVLDVLRLSRGYPDAFAVEPPLTDVAPDPELVRVVEATA 3085
Score = 60.6 bits (126), Expect = 2e-08
Identities = 31/68 (45%), Positives = 42/68 (61%)
Frame = +3 / +3
Query: 651 QGGRRRL**R*RRPQRDPMWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAV 830
QG RR + R RR QRD + ++R +QR +LD VVP Q+R+DN GG H+A+
Sbjct: 3021 QGCRRGVRGRRRRTQRDILRNLRWPLQRERVLDRVRHL*AVVPRQMRQDNPG*GGAHQAL 3200
Query: 831 QMPKLQLQ 854
Q+P LQ Q
Sbjct: 3201 QVP*LQQQ 3224
>LOC_Os07g12910:12007.t01162:unspliced-genomic PHD finger protein, putative, expressed|
Length = 3469
Score = 151 bits (325), Expect(5) = 5e-78
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +1 / +3
Query: 253 EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLV 432
EKENLCLYG+ N WEVALPAEEVP ELPEPALGINFARDGM R DWL+LVAVHSDSWL+
Sbjct: 405 EKENLCLYGHPNGRWEVALPAEEVPPELPEPALGINFARDGMHRRDWLSLVAVHSDSWLL 584
Query: 433 SVAFYYAARLTRNDR 477
SVAF++ ARL N+R
Sbjct: 585 SVAFFFGARLNGNER 629
Score = 131 bits (281), Expect(5) = 5e-78
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +1 / +1
Query: 691 HSETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAEGIKQYKCPSCSSKR 858
HSETLCGTCGG Y+A EFWIGCD+CERW+HGKCV+ITPAKAE IK YKCP CSS +
Sbjct: 2938 HSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSK 3105
Score = 39.6 bits (80), Expect(5) = 5e-78
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1 / +1
Query: 148 PRTVEDIFKDYRARRNAIHRALT 216
PRTVEDIFKD+ RR + RALT
Sbjct: 85 PRTVEDIFKDFSGRRAGLVRALT 153
Score = 33.6 bits (67), Expect(5) = 5e-78
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1 / +3
Query: 475 RKRLFGMMNDLPTVYEVISGMRQSKE 552
RKRLF ++ND PTV E +S + ++
Sbjct: 2643 RKRLFSLINDHPTVLEALSDRKHGRD 2720
Score = 26.7 bits (52), Expect(5) = 5e-78
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / +2
Query: 220 DVEEFYAQCDPEK 258
DV+EFY CDP K
Sbjct: 275 DVDEFYGFCDPGK 313
Score = 81.7 bits (172), Expect(5) = 6e-33
Identities = 33/43 (76%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 827 CFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
CFM SAFAGVI THLPW H S SHPIQNS AL PP VPHRV
Sbjct: 3074 CFMCSAFAGVILTHLPWNHRSQMSHPIQNSLAL*RPPQVPHRV 2946
Score = 69.3 bits (145), Expect(5) = 6e-33
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = -2 / -3
Query: 480 LPVVASEPRGIVEGYGDKPRIGVDGDEREPVAALHAVARKVDPE 349
+P+VA E R EG G++PR+GVDGDEREPVAA+H V +VDPE
Sbjct: 632 VPLVAVEARAEEEGDGEQPRVGVDGDEREPVAAVHPVPGEVDPE 501
Score = 27.6 bits (54), Expect(5) = 6e-33
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3 / -1
Query: 542 CLMPEMTSYTVGKSFIMPNKRFRSLR 465
C + + S TVG S I NKRF +++
Sbjct: 2710 CFLSDSASSTVGWSLIKLNKRFLTIK 2633
Score = 26.7 bits (52), Expect(5) = 6e-33
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 278 PYRHKFSFS 252
PYRHKFSFS
Sbjct: 430 PYRHKFSFS 404
Score = 24.0 bits (46), Expect(5) = 6e-33
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 176 SLKMSSTVRG 147
SLKMSSTVRG
Sbjct: 113 SLKMSSTVRG 84
Score = 62.0 bits (129), Expect(3) = 1e-20
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 479 FRSLRVSRAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
+ SL + RA KATE+SHESEWTATS SQS R +PS AKLIP
Sbjct: 631 YLSLPLRRAPKKKATESSHESEWTATSESQSRRCIPSLAKLIP 503
Score = 61.6 bits (128), Expect(3) = 1e-20
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = -2 / -2
Query: 849 AAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAVYAAACPT*G 700
AA A V+LY R RW Y +A A+ PPLA+VAP+P+ +G V A A T*G
Sbjct: 3096 AAIRALVVLYVFRFRWCYPNAFAVEPPLANVAPNPKLVGVVAATAGST*G 2947
Score = 24.0 bits (46), Expect(3) = 1e-20
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 288 VGVPVQAQVLLL 253
V VPVQAQ+LLL
Sbjct: 440 VRVPVQAQILLL 405
Score = 67.5 bits (141), Expect(2) = 6e-11
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +3 / +3
Query: 678 R*RRPQRDPMWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAVQMPKLQ 848
R*RR Q +PMW++R +QR+ +LD VVP Q+R DN+SE G HKA+Q+P LQ
Sbjct: 2925 R*RRTQ*NPMWNLRWPLQRQRVLDWVRHLRAVVPRQMR*DNTSESGTHKALQVP*LQ 3095
Score = 25.4 bits (49), Expect(2) = 6e-11
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3 / +3
Query: 126 GRRRRLSPPHCRGHLQGL 179
GR R H RGHLQGL
Sbjct: 63 GRPRLPRAAHRRGHLQGL 116
Score = 40.5 bits (82), Expect = 0.024
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +2 / +2
Query: 698 RPYVGHAAAYTAPRNSGSGATCARGGTMASAXXXXXXXXXA*SSTNAQAAA 850
+PYV A A T P + G GAT A GG+ A+A *S+T+A AA
Sbjct: 2945 KPYVEPAVAATTPTSFGLGATFASGGSTANALG*HQRKRNT*STTSALIAA 3097
>LOC_Os07g41740:12007.t03829:unspliced-genomic PHD finger protein, putative, expressed|
Length = 4309
Score = 144 bits (308), Expect(5) = 2e-76
Identities = 55/69 (79%), Positives = 62/69 (89%)
Frame = +1 / +1
Query: 253 EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLV 432
EKENLCLYG+ NE WEV LPAEEVP ELPEPALGINFARDGM+ DWL++VAVHSD+WL+
Sbjct: 2332 EKENLCLYGFPNEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLL 2511
Query: 433 SVAFYYAAR 459
SVAFY+ AR
Sbjct: 2512 SVAFYFGAR 2538
Score = 122 bits (260), Expect(5) = 2e-76
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +1 / +2
Query: 691 HSETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAEGIKQYKCPSCS 849
H ETLCG CG Y A+EFWI CD+CE+W+HGKCVKITPAKAE IKQYKCPSCS
Sbjct: 3743 HGETLCGACGESYGADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCS 3901
Score = 47.8 bits (98), Expect(5) = 2e-76
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +1 / +1
Query: 475 RKRLFGMMNDLPTVYEVISGMRQSK 549
RKRLFGM+NDLPT++EV+SG ++K
Sbjct: 3256 RKRLFGMINDLPTIFEVVSGKSKAK 3330
Score = 37.3 bits (75), Expect(5) = 2e-76
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +1 / +1
Query: 148 PRTVEDIFKDYRARRNAIHRALT 216
PRTVE++F+D++ RR + RALT
Sbjct: 136 PRTVEEVFRDFKGRRAGLVRALT 204
Score = 28.6 bits (56), Expect(5) = 2e-76
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 211 LTHDVEEFYAQCDPEKEN 264
L DVE+F+ QCDP + N
Sbjct: 369 LAADVEDFFRQCDPGEWN 422
Score = 69.3 bits (145), Expect(4) = 3e-20
Identities = 28/44 (63%), Positives = 29/44 (65%)
Frame = -3 / -2
Query: 830 YCFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
YC M SA AGVI THLPW H S S IQNSSA + PH PH V
Sbjct: 3882 YCLMCSALAGVILTHLPWNHFSQMSQQIQNSSAP*LSPHAPHSV 3751
Score = 42.8 bits (87), Expect(4) = 3e-20
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 461 SRAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
+RA * ATE++H S TAT SQS +PSRAKL+P
Sbjct: 2540 NRAPK*NATESNHASLCTATMDSQSFSCIPSRAKLMP 2430
Score = 30.4 bits (60), Expect(4) = 3e-20
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / -3
Query: 539 LMPEMTSYTVGKSFIMPNKRF 477
L P TS VG+S I+PN+RF
Sbjct: 3320 LFPLTTSKIVGRSLIIPNRRF 3258
Score = 24.4 bits (47), Expect(4) = 3e-20
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3 / -1
Query: 272 RHKFSFSGSHCA*NSSTS 219
+ KF GSHC SSTS
Sbjct: 430 KKKFHSPGSHCRKKSSTS 377
Score = 55.1 bits (114), Expect = 9e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3 / +1
Query: 699 DPMWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAVQMPKLQLQE 857
D + +R ++RR +LD EVVP QVR+D+ +GG H+AVQ+P LQ ++
Sbjct: 3751 DAVRRVRGELRRRRVLDLLRHLREVVPRQVRQDHPGQGGAHQAVQVPLLQRRQ 3909
Score = 43.7 bits (89), Expect = 0.003
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -2 / -1
Query: 849 AAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAV 727
AA A VLL LRL L ALA+ P LA VA DPE +GAV
Sbjct: 3901 AAGGALVLLDVLRLGRGDLDALAVEPLLADVAADPELVGAV 3779
Score = 38.6 bits (78), Expect = 0.085
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +2 / +3
Query: 698 RPYVGHAAAYTAPRNSGSGATCARGGTMASAXXXXXXXXXA*SSTNAQAAA 850
R A TAP +SGS AT AR G+ ASA SST+A AA
Sbjct: 3750 RRCAARAGRATAPTSSGSAATSARSGSTASASRSPRPRRSTSSSTSAPPAA 3902
>LOC_Os02g35600:12002.t03198:unspliced-genomic PHD finger protein, putative, expressed|
Length = 3338
Score = 141 bits (303), Expect(5) = 6e-73
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = +1 / +3
Query: 253 EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLV 432
EKENLCLYG NE W+V LPAEEVP ELPEPALGINFARDGM DWL+LVAVHSD+WL+
Sbjct: 2052 EKENLCLYGLPNETWDVTLPAEEVPPELPEPALGINFARDGMIEKDWLSLVAVHSDAWLL 2231
Query: 433 SVAFYYAAR 459
SVAFY+ AR
Sbjct: 2232 SVAFYFGAR 2258
Score = 117 bits (251), Expect(5) = 6e-73
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +1 / +3
Query: 703 LCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAEGIKQYKCPSCSSKRPRQ*QR 876
+CG CG Y+ EFWI CDVCE+W+HGKCV+ITPAKAE IKQYKCP CSSKR R+* R
Sbjct: 2820 MCGACGETYANGEFWICCDVCEKWFHGKCVRITPAKAEHIKQYKCPGCSSKRSRE*PR 2993
Score = 43.2 bits (88), Expect(5) = 6e-73
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1 / +3
Query: 469 NDRKRLFGMMNDLPTVYEVISGMRQSKERDRSGGIDNSGRN 591
N R+RLF M+N LPTVYEV++G+ + + + +G ++ N
Sbjct: 2493 NFRRRLFTMINGLPTVYEVVTGIAKKQTKVSNGSSKSNKSN 2615
Score = 35.0 bits (70), Expect(5) = 6e-73
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1 / +3
Query: 151 RTVEDIFKDYRARRNAIHRALT 216
R+ ED+F+D+RARR I +ALT
Sbjct: 162 RSAEDVFRDFRARRAGIVKALT 227
Score = 28.1 bits (55), Expect(5) = 6e-73
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 220 DVEEFYAQCDP 252
DVE+FY QCDP
Sbjct: 331 DVEKFYRQCDP 363
Score = 63.8 bits (133), Expect(4) = 1e-16
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -3 / -2
Query: 830 YCFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPH 705
YC M SAFAGVI THLPW H S TS IQNS + P PH
Sbjct: 2947 YCLMCSAFAGVIRTHLPWNHFSQTSQQIQNSPFA*VSPQAPH 2822
Score = 41.4 bits (84), Expect(4) = 1e-16
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = -3 / -2
Query: 458 RAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
RA * AT++SH S TATS +QS +PSRAK +P
Sbjct: 2257 RAPK*NATDSSHASL*TATSDNQSFSIIPSRAKFMP 2150
Score = 25.4 bits (49), Expect(4) = 1e-16
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3 / -2
Query: 536 MPEMTSYTVGKSFIMPNKR 480
+P TSYTVG+ IM R
Sbjct: 2560 IPVTTSYTVGRPLIMVKSR 2504
Score = 23.1 bits (44), Expect(4) = 1e-16
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 251 GSHCA*NSSTS 219
GSHC *N STS
Sbjct: 362 GSHCR*NFSTS 330
Score = 64.8 bits (135), Expect = 1e-09
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3 / +2
Query: 705 MWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAVQMPKLQLQE 857
+W +RR ++ R +LD EVVPWQVR D+ EG H+AVQ+P LQ QE
Sbjct: 2822 VWRLRRDLRER*VLDLLRRLREVVPWQVRSDHPCEGRAHQAVQVPWLQQQE 2974
Score = 40.9 bits (83), Expect = 0.017
Identities = 26/50 (52%), Positives = 28/50 (56%)
Frame = -2 / -1
Query: 855 LGAAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAVYAAACPT 706
L AAA A VLL L LR +ALAM P LA VA DPE V +A T
Sbjct: 2972 LAAAARALVLLDVLCLRRGDPNALAMEPLLADVAADPELTVRVSLSASAT 2823
Score = 38.2 bits (77), Expect = 0.12
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = +2 / +1
Query: 707 VGHAAAYTAPRNSGSGATCARGGTMASAXXXXXXXXXA*SSTNAQAAAPR 856
V A T +SGS AT AR G+MASA SST+A AAA R
Sbjct: 2824 VALAERLTRTVSSGSAATSARSGSMASAFGSPLRRQSTSSSTSALAAAAR 2973
>LOC_Os05g34640:12005.t03058:unspliced-genomic PHD finger protein, putative, expressed|
Length = 4745
Score = 150 bits (322), Expect(5) = 1e-71
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +1 / +3
Query: 253 EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLV 432
EKENLCLYGY NE WEV LPAEEVP E+PEPALGINFARDGM DWLALVAVHSDSWL+
Sbjct: 1086 EKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLL 1265
Query: 433 SVAFYYAAR 459
+VAFY+AAR
Sbjct: 1266 AVAFYFAAR 1292
Score = 115 bits (246), Expect(5) = 1e-71
Identities = 44/93 (47%), Positives = 54/93 (58%)
Frame = +1 / +3
Query: 598 PSKHTVEAVPPPRAENNAREAXXXXXXXXXXHSETLCGTCGGIYSAEEFWIGCDVCERWY 777
P H+ PP +++ TLCG+CG +EFWI CD CERWY
Sbjct: 4137 PESHSKAPKPPAPPKDDDESGDEYADEEEEERDNTLCGSCGTNDGKDEFWICCDSCERWY 4316
Query: 778 HGKCVKITPAKAEGIKQYKCPSCSSKRPRQ*QR 876
HGKCVKITPA+AE IK YKCP C +KR R *++
Sbjct: 4317 HGKCVKITPARAEHIKHYKCPDCGNKRARA*RQ 4415
Score = 40.9 bits (83), Expect(5) = 1e-71
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = +1 / +3
Query: 475 RKRLFGMMNDLPTVYEVISGMRQSKERDRSGGIDN 579
R+RLF M+N+LPT++EV++G + + ++++ N
Sbjct: 3930 RRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTN 4034
Score = 31.8 bits (63), Expect(5) = 1e-71
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1 / +1
Query: 151 RTVEDIFKDYRARRNAIHRALT 216
RT E++F+D+R RR + +ALT
Sbjct: 157 RTAEEVFRDFRGRRAGMIKALT 222
Score = 24.9 bits (48), Expect(5) = 1e-71
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 220 DVEEFYAQCDP 252
DVE+FY CDP
Sbjct: 370 DVEKFYQLCDP 402
Score = 62.0 bits (129), Expect(3) = 1e-20
Identities = 26/43 (60%), Positives = 27/43 (62%)
Frame = -3 / -2
Query: 827 CFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
C + SA AGVIFTH PWYH S S IQNSS P PHRV
Sbjct: 4366 CLICSARAGVIFTHFPWYHRSQLSQQIQNSSLPSFVPQDPHRV 4238
Score = 59.7 bits (124), Expect(3) = 1e-20
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = -3 / -2
Query: 461 SRAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
+RAA * AT +SHES WTATSA+QS FMPS AKLIP
Sbjct: 1294 NRAAK*NATASSHESLWTATSANQSFSFMPSLAKLIP 1184
Score = 26.7 bits (52), Expect(3) = 1e-20
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 287 LAYPYRHKFSFS 252
L YP RHKFSFS
Sbjct: 1120 LGYP*RHKFSFS 1085
Score = 46.0 bits (94), Expect(2) = 2e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -2 / -1
Query: 870 LLPRSLGAAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAV 727
L P L AA WA V+ L LHAL+MVPPLA + DP+ + A+
Sbjct: 4409 LCPCPLVAAIWALVVFDMLGSSRCDLHALSMVPPLATITTDPKLIFAI 4266
Score = 25.4 bits (49), Expect(2) = 2e-04
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2 / -1
Query: 426 PRIGVDGDEREPVAALHAVARKVD 355
P I VD + +PV +HAV K+D
Sbjct: 1259 P*ITVDSN*CQPVFLIHAVPSKID 1188
Score = 39.6 bits (80), Expect = 0.045
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3 / +2
Query: 732 RRGILDXXXXXXEVVPWQVREDNSSEGGGHKAVQMPKLQLQE 857
+R +LD VVPW+VRED++ ++ +Q+P+L+ QE
Sbjct: 4271 QR*VLDLL**LRAVVPWKVREDHTCSSRAYQTLQVPRLRQQE 4396
>LOC_Os11g14010:12011.t01235:unspliced-genomic PHD finger protein, putative, expressed|
Length = 7545
Score = 142 bits (305), Expect(5) = 3e-71
Identities = 56/79 (70%), Positives = 63/79 (79%)
Frame = +1 / +2
Query: 253 EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLV 432
EKENLCLYG NE WEV LPAEEVP ELPEPALGINFARDGM DWL+LVAVHSD+WL+
Sbjct: 1610 EKENLCLYGLPNETWEVNLPAEEVPPELPEPALGINFARDGMDEKDWLSLVAVHSDTWLL 1789
Query: 433 SVAFYYAARLTRNDRKRLF 489
+VAFY+ AR + R +
Sbjct: 1790 AVAFYFGARFGFDKESRYY 1846
Score = 114 bits (243), Expect(5) = 3e-71
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = +1 / +2
Query: 691 HSETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAEGIKQYKCPSCSSKRPR 864
H TLCG CG Y +EFWI CD CE W+HGKCVKITPAKAE IK YKCP+CSS R
Sbjct: 6992 HENTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCSSSSKR 7165
Score = 44.1 bits (90), Expect(5) = 3e-71
Identities = 14/30 (46%), Positives = 25/30 (83%)
Frame = +1 / +2
Query: 475 RKRLFGMMNDLPTVYEVISGMRQSKERDRS 564
RKRLF M+N+LPT+YEV++G + + ++++
Sbjct: 6674 RKRLFSMINNLPTIYEVVTGTAKKQSKEKT 6763
Score = 35.9 bits (72), Expect(5) = 3e-71
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1 / +1
Query: 151 RTVEDIFKDYRARRNAIHRALTHDVE 228
RT ED+F+D+RARR + +ALT +E
Sbjct: 175 RTPEDVFRDFRARRAGMIKALTTGME 252
Score = 28.1 bits (55), Expect(5) = 3e-71
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 220 DVEEFYAQCDP 252
DVE+FY QCDP
Sbjct: 429 DVEKFYQQCDP 461
Score = 65.7 bits (137), Expect(4) = 3e-18
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = -3 / -1
Query: 827 CFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
C M SA AGVI THLPW H+S S IQNSS + PH PH V
Sbjct: 7128 CLMCSALAGVILTHLPWNHVSQASQQIQNSSCP*LSPHAPHNV 7000
Score = 40.0 bits (81), Expect(4) = 3e-18
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3 / -1
Query: 446 *KATETSHESEWTATSASQSLRFMPSRAKLIP 351
*KAT +S S TATS SQS +PSRAKLIP
Sbjct: 1803 *KATASSQVSL*TATSDSQSFSSIPSRAKLIP 1708
Score = 30.4 bits (60), Expect(4) = 3e-18
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 528 DDFIHGWQIIHHAK*TLPVVAS 463
D+ I+GW++++HAK P S
Sbjct: 6727 DNLIYGWKVVNHAKKPFPTTQS 6662
Score = 26.3 bits (51), Expect(4) = 3e-18
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 287 LAYPYRHKFSFS 252
L PY+HKFSFS
Sbjct: 1644 LGRPYKHKFSFS 1609
Score = 38.2 bits (77), Expect = 0.12
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3 / +1
Query: 684 RRPQRDPMWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAVQMPKLQ 848
RR ++ MW M + +LD ++VP V +DN +G H+A+Q+P+LQ
Sbjct: 6985 RRSRKHIMWCMW*QLWTG*VLDLLRCL*DMVPR*VCQDNPCQG*AHQALQVPELQ 7149
Score = 37.7 bits (76), Expect = 0.16
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -2 / -3
Query: 849 AAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAVYAAACPT* 703
AA A V+L L L YL L + P L +A DPE + ++ C T*
Sbjct: 7150 AAVRALVVLDVLSLGRGYLDTLTVEPCLTSIAADPELILSIVVTTCTT* 7004
>LOC_Os01g66420:12001.t06003:unspliced-genomic PHD finger protein, putative, expressed|
Length = 4715
Score = 149 bits (321), Expect(5) = 5e-71
Identities = 58/69 (84%), Positives = 61/69 (88%)
Frame = +1 / +1
Query: 253 EKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLV 432
EKENLCLYGY NE WEV LPAEEVP E+PEPALGINFARDGM DWLALVAVHSDSWL+
Sbjct: 1342 EKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLL 1521
Query: 433 SVAFYYAAR 459
SVAFY+ AR
Sbjct: 1522 SVAFYFGAR 1548
Score = 116 bits (247), Expect(5) = 5e-71
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +1 / +3
Query: 691 HSETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAEGIKQYKCPSCSSKRPR 864
H TLCGTCG +EFWI CD CE+WYHGKCVKITPA+AE IKQYKCP C++KR R
Sbjct: 4281 HDNTLCGTCGTNDGKDEFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDCTNKRAR 4454
Score = 40.5 bits (82), Expect(5) = 5e-71
Identities = 12/30 (40%), Positives = 25/30 (83%)
Frame = +1 / +1
Query: 475 RKRLFGMMNDLPTVYEVISGMRQSKERDRS 564
R+RLF M+N+LPT++EV++G + + ++++
Sbjct: 3982 RRRLFNMINNLPTIFEVVTGAAKKQAKEKT 4071
Score = 29.9 bits (59), Expect(5) = 5e-71
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 151 RTVEDIFKDYRARRNAIHRALT 216
RT E++F+D R RR + +ALT
Sbjct: 306 RTAEEVFRDLRGRRAGMIKALT 371
Score = 24.9 bits (48), Expect(5) = 5e-71
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 220 DVEEFYAQCDP 252
DVE+FY CDP
Sbjct: 461 DVEKFYKLCDP 493
Score = 59.3 bits (123), Expect(3) = 8e-16
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = -3 / -2
Query: 830 YCFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
YC + SA AGVI TH P YH S S IQNSS + P VPH+V
Sbjct: 4420 YCLICSARAGVILTHFP*YHFSQLSQQIQNSSLPSLVPQVPHKV 4289
Score = 45.5 bits (93), Expect(3) = 8e-16
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = -3 / -1
Query: 461 SRAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
+RA * AT+++ ES TAT+A+QS FMPS AKLIP
Sbjct: 1550 NRAPK*NATDSNQESL*TATNANQSFSFMPSLAKLIP 1440
Score = 26.7 bits (52), Expect(3) = 8e-16
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 287 LAYPYRHKFSFS 252
L YP RHKFSFS
Sbjct: 1376 LGYP*RHKFSFS 1341
Score = 41.8 bits (85), Expect = 0.009
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3 / +2
Query: 705 MWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAVQMPKLQLQE 857
+WD+ + +LD EVV W+VR+D++ ++AVQ+P L QE
Sbjct: 4295 VWDLWNQRWQGRVLDLLR*LREVVSWEVRQDHTRSCRAYQAVQVPGLHQQE 4447
Score = 37.7 bits (76), Expect(2) = 0.011
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2 / -1
Query: 864 PRSLGAAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAVYAAACPT 706
P L A A VLL L L AL M+P LA +A DPE + A+ + PT
Sbjct: 4454 PGPLVGAVRALVLLDMLGTSGCDLDALPMIPLLAVIATDPELVLAIVGSTGPT 4296
Score = 27.2 bits (53), Expect(2) = 0.011
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2 / -3
Query: 426 PRIGVDGDEREPVAALHAVARKVDPE 349
P I V+ D R+PV +HA+ +VD +
Sbjct: 1515 PGITVNCD*RQPVFLIHAIPSEVDSQ 1438
>LOC_Os04g36730:12004.t03294:unspliced-genomic PHD finger protein, putative, expressed|
Length = 2817
Score = 142 bits (304), Expect(5) = 2e-69
Identities = 55/78 (70%), Positives = 63/78 (80%)
Frame = +1 / +1
Query: 250 PEKENLCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWL 429
PEKENLCLYG N W V LPA+EVP ELPEPALGINFARDGM+ DWL+L+AVHSDSWL
Sbjct: 1324 PEKENLCLYGLPNGTWAVTLPADEVPPELPEPALGINFARDGMQEKDWLSLIAVHSDSWL 1503
Query: 430 VSVAFYYAARLTRNDRKR 483
+SVAFY+ AR + + R
Sbjct: 1504 LSVAFYFGARFGFDKKAR 1557
Score = 115 bits (246), Expect(5) = 2e-69
Identities = 40/59 (67%), Positives = 48/59 (81%)
Frame = +1 / +2
Query: 694 SETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAEGIKQYKCPSCSSKRPRQ* 870
+ET+CG CG Y+ EFWI CD+CE W+HGKCV+ITPAKAE IK YKCP CS+KR R+*
Sbjct: 2348 AETICGACGEAYANGEFWICCDICETWFHGKCVRITPAKAEHIKHYKCPGCSNKRTRE* 2524
Score = 39.1 bits (79), Expect(5) = 2e-69
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1 / +3
Query: 475 RKRLFGMMNDLPTVYEVISGMRQSKERDRSGGIDNSGRNKL 597
R+RLF M + LPTV+EV+SG ++ + +G N +K+
Sbjct: 2043 RERLFMMTSSLPTVFEVVSGGVNTQSKTANGSSKNKSGSKV 2165
Score = 29.9 bits (59), Expect(5) = 2e-69
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1 / +3
Query: 151 RTVEDIFKDYRARRNAIHRALTHDVEEF 234
R+ ED+F+D+ RR+ I +ALT F
Sbjct: 267 RSPEDVFQDFCGRRSGIVKALTIGTSPF 350
Score = 26.3 bits (51), Expect(5) = 2e-69
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 220 DVEEFYAQCDP 252
+VE+FY QCDP
Sbjct: 470 EVEKFYKQCDP 502
Score = 48.7 bits (100), Expect(4) = 5e-14
Identities = 22/43 (51%), Positives = 23/43 (53%)
Frame = -3 / -1
Query: 827 CFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
C M SA AGVI THLPW +S S IQNS P P V
Sbjct: 2481 CLMCSALAGVIRTHLPWNQVSQMSQQIQNSPFA*ASPQAPQMV 2353
Score = 46.4 bits (95), Expect(4) = 5e-14
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = -3 / -2
Query: 458 RAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
RA * AT+++HES WTA SQS +PSRAK IP
Sbjct: 1532 RAPK*NATDSNHESLWTAIRDSQSFSCIPSRAKFIP 1425
Score = 25.4 bits (49), Expect(4) = 5e-14
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 287 LAYPYRHKFSFSG 249
L P RHKFSFSG
Sbjct: 1361 LGSP*RHKFSFSG 1323
Score = 23.1 bits (44), Expect(4) = 5e-14
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 251 GSHCA*NSSTS 219
GSHC *N STS
Sbjct: 501 GSHCL*NFSTS 469
Score = 43.7 bits (89), Expect = 0.003
Identities = 22/66 (33%), Positives = 39/66 (59%)
Frame = +3 / +1
Query: 660 RRRL**R*RRPQRDPMWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAVQMP 839
RR+ R* R + +W + +++R +LD ++VPWQ+ ++ +GG H+A+Q+
Sbjct: 2314 RRQRKWR**RSS*NHLWRLW*GLRKRRVLDLL*HL*DLVPWQMCPNHPCQGGAHQALQVS 2493
Query: 840 KLQLQE 857
LQ QE
Sbjct: 2494 WLQQQE 2511
>LOC_Os01g06540:12001.t00537:unspliced-genomic PHD finger protein, putative|
Length = 1174
Score = 121 bits (258), Expect(2) = 7e-32
Identities = 48/71 (67%), Positives = 59/71 (83%)
Frame = +1 / +1
Query: 265 LCLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSWLVSVAF 444
LCLYG ++ WEVA P E VP ELPEPALGINF+RD M RSDW+AL++V SDSWL++VAF
Sbjct: 409 LCLYGNSDGTWEVAPPPEMVPPELPEPALGINFSRDTMYRSDWVALLSVFSDSWLLAVAF 588
Query: 445 YYAARLTRNDR 477
++ ARL R+DR
Sbjct: 589 FHGARLDRDDR 621
Score = 40.9 bits (83), Expect(2) = 7e-32
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 151 RTVEDIFKDYRARRNAIHRALT 216
R+VEDIF D+RARR+AI RALT
Sbjct: 100 RSVEDIFSDFRARRSAIVRALT 165
Score = 53.3 bits (110), Expect = 3e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = -2 / -2
Query: 480 LPVVASEPRGIVEGYGDKPRIGVDGDEREPVAALHAVARKVDPE 349
+PVVA + EG G++PRIG DG+E +P+ +H VAR+VD +
Sbjct: 624 VPVVAI*SGAVEEGDGEEPRIGEDGEEGDPITPVHRVAREVDAQ 493
Score = 44.1 bits (90), Expect = 0.002
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = -3 / -3
Query: 479 FRSLRVSRAA**KATETSHESEWTATSASQSLRFMPSRAKLIP 351
+ S R SRA KAT SHESE T A+QSL ++ SR KL+P
Sbjct: 623 YLSSRSSRAPWKKATARSHESEKTERRATQSLLYIVSREKLMP 495
>LOC_Os03g60380:12003.t05277:unspliced-genomic dihydroflavonol-4-reductase, putative, expressed|
Length = 3465
Score = 130 bits (278), Expect = 2e-29
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +1 / -1
Query: 691 HSETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAEGIKQYKCPSCSSKRPRQ 867
H+ET CGTCGG+Y+A EFWIGCD+CERW+HGKCV+ITPAKAE IK YKCP CSS ++
Sbjct: 3399 HNETFCGTCGGLYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSSSKK 3223
Score = 70.3 bits (147), Expect(2) = 3e-13
Identities = 29/43 (67%), Positives = 29/43 (67%)
Frame = -3 / +2
Query: 827 CFMPSAFAGVIFTHLPWYHLSHTSHPIQNSSALYMPPHVPHRV 699
C M SA AGVI THLPW H S SHPIQNS AL PP VP V
Sbjct: 3263 CLMCSALAGVILTHLPWNHRSQMSHPIQNSFAL*RPPQVPQNV 3391
Score = 25.4 bits (49), Expect(2) = 3e-13
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / +3
Query: 856 SWSCSLGICTALCPPP 809
S CS G C+A C PP
Sbjct: 3234 SCCCSQGTCSA*CAPP 3281
Score = 60.6 bits (126), Expect = 2e-08
Identities = 31/68 (45%), Positives = 42/68 (61%)
Frame = +3 / -3
Query: 651 QGGRRRL**R*RRPQRDPMWDMRRHIQRRGILDXXXXXXEVVPWQVREDNSSEGGGHKAV 830
QG RR + R RR QRD + ++R +QR +LD VVP Q+R+DN GG H+A+
Sbjct: 3439 QGCRRGVRGRRRRTQRDILRNLRWPLQRERVLDRVRHL*AVVPRQMRQDNPG*GGAHQAL 3260
Query: 831 QMPKLQLQ 854
Q+P LQ Q
Sbjct: 3259 QVP*LQQQ 3236
Score = 45.5 bits (93), Expect = 7e-04
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = -2 / +1
Query: 849 AAAWAFVLLYALRLRWSYLHALAMVPPLAHVAPDPEFLGAVYAAA 715
AA A V+L LRL Y A A+ PPL VAPDPE + V A A
Sbjct: 3241 AAVRALVVLDVLRLSRGYPDAFAVEPPLTDVAPDPELVRVVEATA 3375
>LOC_Os01g06530:12001.t00536:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 3630
Score = 46.4 bits (95), Expect = 4e-04
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +1 / -1
Query: 472 DRKRLFGMMNDLPTVYEVISGMRQSKER 555
+R RLF M+NDLPTVYEV+ G+ QS E+
Sbjct: 999 NRVRLFNMINDLPTVYEVVFGVEQSDEQ 916
Score = 39.6 bits (80), Expect = 0.045
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / +1
Query: 552 LLRLSHA*DDFIHGWQIIHHAK*TLPV 472
L+RL H D+F++ WQII H K T PV
Sbjct: 919 LIRLFHTEDNFVYSWQIIDHVKQTHPV 999
Score = 37.3 bits (75), Expect = 0.22
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 542 CLMPEMTSYTVGKSFIMPNKR 480
C P+ TSYTVGKS IM NKR
Sbjct: 929 CSTPKTTSYTVGKSLIMLNKR 991
>LOC_Os08g08310:12008.t00717:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 6016
Score = 26.3 bits (51), Expect(2) = 6.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 1091 IIGEVYLYYFIYVNICI 1141
II +Y+Y +IY+ +CI
Sbjct: 5396 II*YIYIYIYIYIYVCI 5446
Score = 23.1 bits (44), Expect(2) = 6.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2 / +3
Query: 1118 FIYVNICIISLFSCQKKEKKKK 1183
+IY+ ICI C + +KK
Sbjct: 5478 YIYIYICIYIYKPCSNRAMQKK 5543
>LOC_Os03g52239:12003.t04550:unspliced-genomic homeodomain protein JUBEL1, putative, expressed|
Length = 11147
Score = 31.8 bits (63), Expect = 9.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 1076 EVHVPIIGEVYLYYFIYVNICIISLFSCQK 1165
+ ++ I +Y+Y +IY+ ICI S+ C K
Sbjct: 7270 DAYIYIYIYIYIYIYIYIYICICSM*RCVK 7359
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 388,601,043
Number of extensions: 6111325
Number of successful extensions: 39310
Number of sequences better than 10.0: 55
Length of query: 394
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 344
Effective length of database: 52,799,986
Effective search space: 18163195184
Effective search space used: 18163195184
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)