ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf67i07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121768:Os02g0785800 | 212 | 1e-55 | 2 | AK063859:Os02g0785800 | 212 | 1e-55 | 3 | Os05g0555800:Os05g0555800 | 197 | 6e-51 | 4 | AK102775:Os05g0556900 | 197 | 6e-51 | 5 | AK058689:Os05g0556900 | 197 | 6e-51 | 6 | AK058525:Os05g0556900 | 71 | 7e-13 | 7 | AK063676:Os04g0581700 | 30 | 1.0 | 8 | Os03g0436600:Os03g0436600 | 30 | 1.8 | 9 | AK120923:Os04g0542200 | 30 | 1.8 | 10 | AK119496:Os02g0456000 | 29 | 3.0 | 11 | AK067268: | 28 | 3.9 | 12 | AK067131:Os03g0221600 | 28 | 3.9 | 13 | AK059596:Os01g0276100 | 28 | 5.2 | 14 | AK111280:Os01g0955000 | 28 | 6.7 | 15 | AK107159:Os02g0482400 | 28 | 6.7 |
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>AK121768:Os02g0785800 | Length = 112 Score = 212 bits (540), Expect = 1e-55 Identities = 101/112 (90%), Positives = 108/112 (96%) Frame = +2 Query: 98 MVKGRTGQRVRLYVRGTILGFKRSKSNQYENTSLVQIEGVNTKEDVAWYGGKRLAYVYKA 277 MVKGRTGQRVRLYVRGTILG+KRSKSNQYENTSLVQIEGVNTKE+VAWY GKR+AYVYKA Sbjct: 1 MVKGRTGQRVRLYVRGTILGYKRSKSNQYENTSLVQIEGVNTKEEVAWYCGKRMAYVYKA 60 Query: 278 KTKSNGTHYRCLWGKITRPHGNSGVVRAQFKSNLPAESMGRKVRVFMYPSSI 433 KTKS GT+YRC+WGK+TRPHGNSGVVRA+FKSNLP SMGRKVRVFMYPSSI Sbjct: 61 KTKSGGTNYRCIWGKVTRPHGNSGVVRAKFKSNLPPASMGRKVRVFMYPSSI 112
>AK063859:Os02g0785800 | Length = 112 Score = 212 bits (540), Expect = 1e-55 Identities = 101/112 (90%), Positives = 108/112 (96%) Frame = +2 Query: 98 MVKGRTGQRVRLYVRGTILGFKRSKSNQYENTSLVQIEGVNTKEDVAWYGGKRLAYVYKA 277 MVKGRTGQRVRLYVRGTILG+KRSKSNQYENTSLVQIEGVNTKE+VAWY GKR+AYVYKA Sbjct: 1 MVKGRTGQRVRLYVRGTILGYKRSKSNQYENTSLVQIEGVNTKEEVAWYCGKRMAYVYKA 60 Query: 278 KTKSNGTHYRCLWGKITRPHGNSGVVRAQFKSNLPAESMGRKVRVFMYPSSI 433 KTKS GT+YRC+WGK+TRPHGNSGVVRA+FKSNLP SMGRKVRVFMYPSSI Sbjct: 61 KTKSGGTNYRCIWGKVTRPHGNSGVVRAKFKSNLPPASMGRKVRVFMYPSSI 112
>Os05g0555800:Os05g0555800 | Length = 111 Score = 197 bits (500), Expect = 6e-51 Identities = 92/111 (82%), Positives = 103/111 (92%) Frame = +2 Query: 101 VKGRTGQRVRLYVRGTILGFKRSKSNQYENTSLVQIEGVNTKEDVAWYGGKRLAYVYKAK 280 +KGR GQRVRLYVRGTILG+KRSKSNQYENTSL+QIEGVNTKE+V WY GKR+AYVYKAK Sbjct: 1 MKGRQGQRVRLYVRGTILGYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAK 60 Query: 281 TKSNGTHYRCLWGKITRPHGNSGVVRAQFKSNLPAESMGRKVRVFMYPSSI 433 TKSN + RC+WGK+TRPHGNSGVVRA+F+SNLP SMG+KVRVFMYPSSI Sbjct: 61 TKSNDSTIRCIWGKVTRPHGNSGVVRAKFRSNLPPTSMGKKVRVFMYPSSI 111
>AK102775:Os05g0556900 | Length = 111 Score = 197 bits (500), Expect = 6e-51 Identities = 92/111 (82%), Positives = 103/111 (92%) Frame = +2 Query: 101 VKGRTGQRVRLYVRGTILGFKRSKSNQYENTSLVQIEGVNTKEDVAWYGGKRLAYVYKAK 280 +KGR GQRVRLYVRGTILG+KRSKSNQYENTSL+QIEGVNTKE+V WY GKR+AYVYKAK Sbjct: 1 MKGRQGQRVRLYVRGTILGYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAK 60 Query: 281 TKSNGTHYRCLWGKITRPHGNSGVVRAQFKSNLPAESMGRKVRVFMYPSSI 433 TKSN + RC+WGK+TRPHGNSGVVRA+F+SNLP SMG+KVRVFMYPSSI Sbjct: 61 TKSNDSTIRCIWGKVTRPHGNSGVVRAKFRSNLPPTSMGKKVRVFMYPSSI 111
>AK058689:Os05g0556900 | Length = 111 Score = 197 bits (500), Expect = 6e-51 Identities = 92/111 (82%), Positives = 103/111 (92%) Frame = +2 Query: 101 VKGRTGQRVRLYVRGTILGFKRSKSNQYENTSLVQIEGVNTKEDVAWYGGKRLAYVYKAK 280 +KGR GQRVRLYVRGTILG+KRSKSNQYENTSL+QIEGVNTKE+V WY GKR+AYVYKAK Sbjct: 1 MKGRQGQRVRLYVRGTILGYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAK 60 Query: 281 TKSNGTHYRCLWGKITRPHGNSGVVRAQFKSNLPAESMGRKVRVFMYPSSI 433 TKSN + RC+WGK+TRPHGNSGVVRA+F+SNLP SMG+KVRVFMYPSSI Sbjct: 61 TKSNDSTIRCIWGKVTRPHGNSGVVRAKFRSNLPPTSMGKKVRVFMYPSSI 111
>AK058525:Os05g0556900 | Length = 38 Score = 70.9 bits (172), Expect = 7e-13 Identities = 32/38 (84%), Positives = 36/38 (94%) Frame = +2 Query: 320 KITRPHGNSGVVRAQFKSNLPAESMGRKVRVFMYPSSI 433 K+TRPHGNSGVVRA+F+SNLP SMG+KVRVFMYPSSI Sbjct: 1 KVTRPHGNSGVVRAKFRSNLPPTSMGKKVRVFMYPSSI 38
>AK063676:Os04g0581700 | Length = 154 Score = 30.4 bits (67), Expect = 1.0 Identities = 20/60 (33%), Positives = 30/60 (50%) Frame = +1 Query: 133 LRQGHHPRLQEVQVEPVREHVAGADRGGEHQGGRGVVRRQAPGVRVQGQDQEQRHPLPLP 312 LR+ H RL + EP RE + GG+ +G VRR+ G R + + + +H P P Sbjct: 47 LRKAEHTRLN-LSYEPARESWGRSAAGGDAEG----VRRRRRGQRRRHEGEAPQHEEPHP 101
>Os03g0436600:Os03g0436600 | Length = 309 Score = 29.6 bits (65), Expect = 1.8 Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +1 Query: 121 ARQALRQGHHPRLQEVQVEPVREHVAGADRGGEHQGGRGVVRRQ-APGVR 267 AR A GH P+ VREH AG GGE G VRRQ P VR Sbjct: 235 ARGAGHPGHRPQ------HGVREHPAGGGGGGEEVAG---VRRQLQPAVR 275
>AK120923:Os04g0542200 | Length = 715 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +1 Query: 124 RQALRQGHHPRLQEVQVEPVREHVAGADRGGEHQGG 231 R+ RQ PRL+ V P E +AG D GG+ + G Sbjct: 36 RRRKRQPGPPRLELVVAHPREEEMAGLDGGGDAEEG 71
>AK119496:Os02g0456000 | Length = 229 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -3 Query: 266 RTPGACRRTTPRPPWCSPPRSAP 198 R+P AC +TPR P PP AP Sbjct: 137 RSPPACATSTPRTPGRRPPSRAP 159
>AK067268: | Length = 324 Score = 28.5 bits (62), Expect = 3.9 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 169 QVEPVREHVAGADRGGEHQGGRGVVRR 249 Q++P ++H +G RGGE +GG+ RR Sbjct: 233 QLQPFQDHSSG--RGGEWRGGKAATRR 257
>AK067131:Os03g0221600 | Length = 480 Score = 28.5 bits (62), Expect = 3.9 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Frame = +1 Query: 124 RQALRQGHHPRLQEV----QVEPVREHVAGADRGGEHQGGRGVVRRQAPGVRVQGQDQEQ 291 R++ R+ PR + V +V V E G RG +G RG VRR GVR + ++Q Q Sbjct: 353 RRSRRRRSRPRPRRVAVHHEVAVVLERGDGGARG-RRRGRRGRVRRPQQGVRRRRREQPQ 411
>AK059596:Os01g0276100 | Length = 362 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +1 Query: 142 GHHPRLQEVQVEPVREHVAGADRGGEHQGGRGVV 243 G+ R +V + +RE+ G G EHQ RGVV Sbjct: 132 GYKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVV 165
>AK111280:Os01g0955000 | Length = 255 Score = 27.7 bits (60), Expect = 6.7 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Frame = +1 Query: 175 EPVREHVAGADRGGEHQGGR-----GVVRRQAPGVR 267 E R AGA GG+H GGR RR+ PG R Sbjct: 137 EDGRLRAAGAVAGGQHDGGRHERLLAGQRRRVPGAR 172
>AK107159:Os02g0482400 | Length = 457 Score = 27.7 bits (60), Expect = 6.7 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +1 Query: 160 QEVQVEPVREHVAGADRGGEHQGGRGVVRRQAPGVR 267 ++ V+ VR H RGGE G V R GVR Sbjct: 385 EDAPVDGVRPHAGLVRRGGEGLSAAGAVHRGLAGVR 420 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,207,950 Number of extensions: 342628 Number of successful extensions: 1829 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1812 Number of HSP's successfully gapped: 15 Length of query: 212 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 116 Effective length of database: 11,555,919 Effective search space: 1340486604 Effective search space used: 1340486604 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
