ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf70j18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121648:Os01g0876400 | 301 | 4e-82 | 2 | AK100486:Os01g0876400 | 301 | 4e-82 | 3 | AK073144:Os01g0876400 | 301 | 4e-82 | 4 | AK072910:Os01g0876400 | 301 | 4e-82 | 5 | AK065101:Os01g0876400 | 301 | 4e-82 | 6 | Os01g0599900:Os01g0599900 | 75 | 4e-14 | 7 | Os01g0523500:Os01g0523500 | 29 | 3.4 | 8 | Os04g0257000:Os04g0257000 | 28 | 5.7 | 9 | Os06g0493000:Os06g0493000 | 28 | 7.5 |
|---|
>AK121648:Os01g0876400 | Length = 625 Score = 301 bits (770), Expect = 4e-82 Identities = 150/192 (78%), Positives = 166/192 (86%) Frame = +1 Query: 1 NGVHDQIVETRTLQAGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 180 NG HDQ+ ETR +QAGRIPGDTVLK+LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD Sbjct: 434 NGAHDQVTETRPIQAGRIPGDTVLKVLMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 493 Query: 181 SDIDNKDAXXXXXXXXXXXXQSSKNDFARDIESILSWKSVASSQLDQLVLDNVILRSEYE 360 +DID KDA + SK+DFA++IE ILSWK VASSQL+QL+LDNVI+RSE E Sbjct: 494 ADIDTKDALLEKIKLELKHLERSKDDFAKEIEGILSWKLVASSQLNQLLLDNVIIRSELE 553 Query: 361 RFRDKQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIFNICRLYDFEKLDRVKSGWLVLLL 540 RFR+KQ DLENRSF VIFL F+FGCLAIAKLSIGMIFN CRLY+FEK DRVKSGWLVLL Sbjct: 554 RFREKQADLENRSFAVIFLSFVFGCLAIAKLSIGMIFNTCRLYNFEKFDRVKSGWLVLLF 613 Query: 541 SSCIVASILVIQ 576 SSCI+ASIL+IQ Sbjct: 614 SSCIIASILIIQ 625
>AK100486:Os01g0876400 | Length = 511 Score = 301 bits (770), Expect = 4e-82 Identities = 150/192 (78%), Positives = 166/192 (86%) Frame = +1 Query: 1 NGVHDQIVETRTLQAGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 180 NG HDQ+ ETR +QAGRIPGDTVLK+LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD Sbjct: 320 NGAHDQVTETRPIQAGRIPGDTVLKVLMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 379 Query: 181 SDIDNKDAXXXXXXXXXXXXQSSKNDFARDIESILSWKSVASSQLDQLVLDNVILRSEYE 360 +DID KDA + SK+DFA++IE ILSWK VASSQL+QL+LDNVI+RSE E Sbjct: 380 ADIDTKDALLEKIKLELKHLERSKDDFAKEIEGILSWKLVASSQLNQLLLDNVIIRSELE 439 Query: 361 RFRDKQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIFNICRLYDFEKLDRVKSGWLVLLL 540 RFR+KQ DLENRSF VIFL F+FGCLAIAKLSIGMIFN CRLY+FEK DRVKSGWLVLL Sbjct: 440 RFREKQADLENRSFAVIFLSFVFGCLAIAKLSIGMIFNTCRLYNFEKFDRVKSGWLVLLF 499 Query: 541 SSCIVASILVIQ 576 SSCI+ASIL+IQ Sbjct: 500 SSCIIASILIIQ 511
>AK073144:Os01g0876400 | Length = 625 Score = 301 bits (770), Expect = 4e-82 Identities = 150/192 (78%), Positives = 166/192 (86%) Frame = +1 Query: 1 NGVHDQIVETRTLQAGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 180 NG HDQ+ ETR +QAGRIPGDTVLK+LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD Sbjct: 434 NGAHDQVTETRPIQAGRIPGDTVLKVLMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 493 Query: 181 SDIDNKDAXXXXXXXXXXXXQSSKNDFARDIESILSWKSVASSQLDQLVLDNVILRSEYE 360 +DID KDA + SK+DFA++IE ILSWK VASSQL+QL+LDNVI+RSE E Sbjct: 494 ADIDTKDALLEKIKLELKHLERSKDDFAKEIEGILSWKLVASSQLNQLLLDNVIIRSELE 553 Query: 361 RFRDKQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIFNICRLYDFEKLDRVKSGWLVLLL 540 RFR+KQ DLENRSF VIFL F+FGCLAIAKLSIGMIFN CRLY+FEK DRVKSGWLVLL Sbjct: 554 RFREKQADLENRSFAVIFLSFVFGCLAIAKLSIGMIFNTCRLYNFEKFDRVKSGWLVLLF 613 Query: 541 SSCIVASILVIQ 576 SSCI+ASIL+IQ Sbjct: 614 SSCIIASILIIQ 625
>AK072910:Os01g0876400 | Length = 625 Score = 301 bits (770), Expect = 4e-82 Identities = 150/192 (78%), Positives = 166/192 (86%) Frame = +1 Query: 1 NGVHDQIVETRTLQAGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 180 NG HDQ+ ETR +QAGRIPGDTVLK+LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD Sbjct: 434 NGAHDQVTETRPIQAGRIPGDTVLKVLMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 493 Query: 181 SDIDNKDAXXXXXXXXXXXXQSSKNDFARDIESILSWKSVASSQLDQLVLDNVILRSEYE 360 +DID KDA + SK+DFA++IE ILSWK VASSQL+QL+LDNVI+RSE E Sbjct: 494 ADIDTKDALLEKIKLELKHLERSKDDFAKEIEGILSWKLVASSQLNQLLLDNVIIRSELE 553 Query: 361 RFRDKQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIFNICRLYDFEKLDRVKSGWLVLLL 540 RFR+KQ DLENRSF VIFL F+FGCLAIAKLSIGMIFN CRLY+FEK DRVKSGWLVLL Sbjct: 554 RFREKQADLENRSFAVIFLSFVFGCLAIAKLSIGMIFNTCRLYNFEKFDRVKSGWLVLLF 613 Query: 541 SSCIVASILVIQ 576 SSCI+ASIL+IQ Sbjct: 614 SSCIIASILIIQ 625
>AK065101:Os01g0876400 | Length = 607 Score = 301 bits (770), Expect = 4e-82 Identities = 150/192 (78%), Positives = 166/192 (86%) Frame = +1 Query: 1 NGVHDQIVETRTLQAGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 180 NG HDQ+ ETR +QAGRIPGDTVLK+LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD Sbjct: 416 NGAHDQVTETRPIQAGRIPGDTVLKVLMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 475 Query: 181 SDIDNKDAXXXXXXXXXXXXQSSKNDFARDIESILSWKSVASSQLDQLVLDNVILRSEYE 360 +DID KDA + SK+DFA++IE ILSWK VASSQL+QL+LDNVI+RSE E Sbjct: 476 ADIDTKDALLEKIKLELKHLERSKDDFAKEIEGILSWKLVASSQLNQLLLDNVIIRSELE 535 Query: 361 RFRDKQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIFNICRLYDFEKLDRVKSGWLVLLL 540 RFR+KQ DLENRSF VIFL F+FGCLAIAKLSIGMIFN CRLY+FEK DRVKSGWLVLL Sbjct: 536 RFREKQADLENRSFAVIFLSFVFGCLAIAKLSIGMIFNTCRLYNFEKFDRVKSGWLVLLF 595 Query: 541 SSCIVASILVIQ 576 SSCI+ASIL+IQ Sbjct: 596 SSCIIASILIIQ 607
>Os01g0599900:Os01g0599900 | Length = 537 Score = 75.1 bits (183), Expect = 4e-14 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 3/180 (1%) Frame = +1 Query: 43 AGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFDSDIDNKDAXXXXXX 222 AGR GD VLKI+MQK++SL++ S LE Y + LN RYG D + + Sbjct: 374 AGRFHGDAVLKIMMQKMRSLELGLSTLEDYTKALNHRYGAKLPDLHTGLSQ--------- 424 Query: 223 XXXXXXQSSKNDFARDIESILSWKSVASSQLDQLVLDNVILRSEYERFRDKQVDLENRSF 402 + + D+ ++ WK + L +L RS E R Q ++N+ Sbjct: 425 -----TTMALDRMKADVRDLVEWKGNVAKDLGEL----KEWRSNVEEMRSIQETMQNKEL 475 Query: 403 VVIFLCFIFGCLAIAKLS---IGMIFNICRLYDFEKLDRVKSGWLVLLLSSCIVASILVI 573 V+ + F CLA+ KL+ + +F E++ GW+++L SS ++++ Sbjct: 476 AVLSISLFFACLALFKLACDRVLFLFTRKGAAAAERMCGASKGWILVLASSSFTTFLVLL 535
>Os01g0523500:Os01g0523500 | Length = 1013 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Frame = -1 Query: 123 QYRKAHIKRLD-FLHQYLKNCISRNSASLKCPCLY 22 +YR ++I+ +D F+ KN S+ + ++CPC++ Sbjct: 11 RYRASYIEGVDIFMKAAKKNAASKKTKDIRCPCVH 45
>Os04g0257000:Os04g0257000 | Length = 1012 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = -2 Query: 623 NYNMQPRLYGDEYIHHCITKMEATMQLLSSSTSHPDFTLSNFSKSYNLQ--ILNIIPMDN 450 N+ + + +G + + K+ +QLL+ S+ HP F +S K+ Q +L+ +P Sbjct: 819 NHKLTYKFFGPFPVIARVGKVAYELQLLAHSSIHPVFHVSQLRKAQGFQPDVLSQLP--- 875 Query: 449 LAMARHPKIKHRNITTKLL 393 P +KH + L Sbjct: 876 ------PSLKHLQVPETFL 888
>Os06g0493000:Os06g0493000 | Length = 1573 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 Query: 584 IHHCITKMEATMQLLSSSTSHPDFTLSNFSKSYNLQILNIIPM 456 IH CI KM AT + S STS F F L+I+N P+ Sbjct: 533 IHVCIGKMSATALIDSGSTS--TFISPKFVSKAGLEIVNNDPI 573 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,097,429 Number of extensions: 344505 Number of successful extensions: 889 Number of sequences better than 10.0: 9 Number of HSP's gapped: 889 Number of HSP's successfully gapped: 9 Length of query: 227 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 130 Effective length of database: 11,515,878 Effective search space: 1497064140 Effective search space used: 1497064140 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
