>LOC_Os01g65520:12001.t05916:unspliced-genomic membrane protein-like, putative, expressed|
Length = 3808
Score = 166 bits (356), Expect(4) = 1e-89
Identities = 68/83 (81%), Positives = 74/83 (89%)
Frame = +1 / +1
Query: 340 ILRSEYERFRDKQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIFNICRLYDFEKLDRVKS 519
+ RSE ERFR+KQ DLENRSF VIFL F+FGCLAIAKLSIGMIFN CRLY+FEK DRVKS
Sbjct: 2737 LCRSELERFREKQADLENRSFAVIFLSFVFGCLAIAKLSIGMIFNTCRLYNFEKFDRVKS 2916
Query: 520 GWLVLLLSSCIVASILVIQ*CMY 588
GWLVLL SSCI+ASIL+IQ*C Y
Sbjct: 2917 GWLVLLFSSCIIASILIIQ*CTY 2985
Score = 152 bits (326), Expect(4) = 1e-89
Identities = 64/87 (73%), Positives = 70/87 (80%)
Frame = +1 / +3
Query: 1 NGVHDQIVETRTLQAGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 180
NG HDQ+ ETR +QAGRIPGDTVLK+LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD
Sbjct: 2055 NGAHDQVTETRPIQAGRIPGDTVLKVLMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 2234
Query: 181 SDIDNKDAXXXXXXXXXXXXQSSKNDF 261
+DID KDA + SK+DF
Sbjct: 2235 ADIDTKDALLEKIKLELKHLERSKDDF 2315
Score = 53.3 bits (110), Expect(4) = 1e-89
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +1 / +1
Query: 262 ARDIESILSWKSVASSQLDQLVLDNVILR 348
A++IE ILSWK VASSQL+QL+LDNVI+R
Sbjct: 2401 AKEIEGILSWKLVASSQLNQLLLDNVIIR 2487
Score = 26.7 bits (52), Expect(4) = 1e-89
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 593 LHIIAAAYCNSMR 631
LHIIAAA CN +R
Sbjct: 2989 LHIIAAALCNCLR 3027
Score = 150 bits (322), Expect(4) = 1e-79
Identities = 61/80 (76%), Positives = 70/80 (87%)
Frame = -2 / -3
Query: 584 IHHCITKMEATMQLLSSSTSHPDFTLSNFSKSYNLQILNIIPMDNLAMARHPKIKHRNIT 405
+HHCI KMEA MQLL+S+TSHPDFTLSNFSK YNLQ+LNI+P+D+LA+A+HPK K RNIT
Sbjct: 2981 VHHCIIKMEAIMQLLNSNTSHPDFTLSNFSKLYNLQVLNIMPIDSLAIAKHPKTKLRNIT 2802
Query: 404 TKLLFSKSTCLSRNRSYSDL 345
KLLFSKS C SRN S SDL
Sbjct: 2801 AKLLFSKSACFSRNLSSSDL 2742
Score = 134 bits (288), Expect(4) = 1e-79
Identities = 60/87 (68%), Positives = 65/87 (74%)
Frame = -3 / -2
Query: 262 QSHFCCSEAPSTPILSSPRVHLCYQYQNQNP*RFVHICC*VPLGTAPIQKSSHQEIGLSA 83
QSH C S+ S PI SPRVHL YQYQ+QNP*+F HIC V L TAP QKSSHQEI SA
Sbjct: 2316 QSHLCFSQDASAPI*FSPRVHLWYQYQHQNP*KFAHICYLVLLDTAPRQKSSHQEIAPSA 2137
Query: 82 SVS*ELYLQEFCQPEVSLSLQSDHEHH 2
V *ELYLQE CQPE++LS DHEHH
Sbjct: 2136 LVP*ELYLQESCQPELALSR*LDHEHH 2056
Score = 54.2 bits (112), Expect(4) = 1e-79
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = -2 / -3
Query: 365 NRSYSDLSMTLSRTSWSNCEEATDFHERI 279
N +Y++L MTLS++SW NCEEAT FHERI
Sbjct: 2504 NGNYTNLIMTLSKSSWFNCEEATSFHERI 2418
Score = 25.4 bits (49), Expect(4) = 1e-79
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 632 TSWNYNMQPRLYG 594
TS NY QP+LYG
Sbjct: 3028 TSGNYKAQPQLYG 2990
Score = 141 bits (303), Expect(4) = 3e-65
Identities = 62/95 (65%), Positives = 73/95 (76%)
Frame = +3 / +2
Query: 3 WCS*SDCRDKDTSGWQNSWRYSS*DTDAESPIS*CELFCIGAVPRGTQQQIWTNL*GF*F 182
WCS*S RDK SGWQ+SWRYSS* T+AE IS*CELFC+GAV R T+ QIW N *GF*
Sbjct: 2057 WCS*SSYRDKANSGWQDSWRYSS*GTNAEGAIS*CELFCLGAVSRRTK*QIWANF*GF*C 2236
Query: 183 *Y**QRCTLGEDKIGVEGASEQQK*LCERY*KYPF 287
*Y* QRCTLGE++IG E + E+Q+*LC + + F
Sbjct: 2237 *Y*YQRCTLGENQIGAEAS*EKQR*LCMLFYSHVF 2341
Score = 112 bits (239), Expect(4) = 3e-65
Identities = 54/81 (66%), Positives = 62/81 (76%)
Frame = +3 / +3
Query: 345 QI*V*AISG*AG*LGE*ELCCDIPVFYFWMPSHS*IVHRYDIQYL*II*FRKVG*GKIRM 524
QI * ISG AG*LGE*+LCC+IP F FWM S * V+R+DI YL*II*F K+ *GKI M
Sbjct: 2742 QIRT*KISGKAG*LGE*KLCCNIPEFCFWMFSDC*AVYRHDI*YL*II*F*KIR*GKIWM 2921
Query: 525 ACAAAEQLHCGLHFGDTVMYV 587
AC A +QLH LHF +TVMY+
Sbjct: 2922 ACVAVQQLHYSLHFDNTVMYL 2984
Score = 37.3 bits (75), Expect(4) = 3e-65
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3 / +3
Query: 264 ERY*KYPFMEVSCLLAVRPTCPG*CHTQI 350
ER *+ ME SC L V+P G*CH Q+
Sbjct: 2403 ERN*RDSLMETSCFLTVKPATLG*CHNQV 2489
Score = 24.9 bits (48), Expect(4) = 3e-65
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 589 SSPYNRGCIL*FHEV 633
S+PYN GC L* EV
Sbjct: 2985 STPYNCGCAL*LPEV 3029
Score = 118 bits (253), Expect(3) = 1e-55
Identities = 59/91 (64%), Positives = 63/91 (69%)
Frame = +2 / +1
Query: 2 MVFMIRL*RQGHFRLAEFLEIQFLRY*CRKSNLLM*AFLYWSGT*RNSTADMDKSLRILI 181
MV MI+L RQG FRLA FLEIQFLRY*CR+ NLLM*AFL WSG *+N ADM K LRIL+
Sbjct: 2056 MVLMIKLPRQGQFRLAGFLEIQFLRY*CRRCNLLM*AFLSWSGI*KN*IADMGKFLRILM 2235
Query: 182 LILITKMHXXXXXXXXXXXFRAAKMTLREIL 274
LILI KMH R AKMTL L
Sbjct: 2236 LILIPKMHSWRKSNWS*SILREAKMTLYAFL 2328
Score = 111 bits (238), Expect(3) = 1e-55
Identities = 55/80 (68%), Positives = 61/80 (76%)
Frame = +2 / +2
Query: 344 SDLSMSDFGISRLTWRIGALL*YSCVLFLDA*P*LNCP*V*YSIFVDYMISKSWIG*NPD 523
+D ++ DFG SRLTWRI ALL*YS VLFLD * L+C * *Y I VDY+I K+ IG*N D
Sbjct: 2741 ADQNLKDFGKSRLTWRIEALL*YS*VLFLDV*RLLSCL*A*YLIPVDYIILKNSIG*NLD 2920
Query: 524 GLCCC*AAALWPPFW*YSDV 583
GLCCC A AL PPF *YSDV
Sbjct: 2921 GLCCCSAVAL*PPF**YSDV 2980
Score = 32.7 bits (65), Expect(3) = 1e-55
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 263 REILKVSFHGSQLPPRS*TNLSWIMSYSDL 352
R+ LK HG+ L P S*T+ SWIMS S L
Sbjct: 2402 RKKLKGFSHGN*LLPHS*TSYSWIMS*SGL 2491
Score = 121 bits (258), Expect(4) = 1e-53
Identities = 58/87 (66%), Positives = 63/87 (72%)
Frame = -1 / -3
Query: 261 KVIFAAXXXXXXXXXXXQECIFVINIRIKILKDLSISAVEFL*VPLQYRKAHIKRLDFLH 82
KVIFA+ QECIF INI IKILK+L ISA+ F *+PLQ RKAHIKRL LH
Sbjct: 2315 KVIFASLKMLQLQFDFLQECIFGINISIKILKNLPISAI*FF*IPLQDRKAHIKRLHLLH 2136
Query: 81 QYLKNCISRNSASLKCPCLYNLIMNTI 1
YLKNCISRN ASL PCL NLIM+TI
Sbjct: 2135 *YLKNCISRNPASLNWPCLGNLIMSTI 2055
Score = 93.6 bits (198), Expect(4) = 1e-53
Identities = 44/76 (57%), Positives = 51/76 (67%)
Frame = -1 / -2
Query: 588 VHTSLYXXXXXXXXXXXXXHKPSGFYPIQLFEII*STNIEYHTYGQFSYG*ASKNKTQEY 409
+ TSLY HKPS FYPI+ F+II*ST I+YH Y Q S * SKNKTQEY
Sbjct: 2985 IGTSLYYQNGGYNATAEQQHKPSRFYPIEFFKII*STGIKYHAYRQLSNR*TSKNKTQEY 2806
Query: 408 HNKAPILQVNLLIPKS 361
++KA ILQV+LL PKS
Sbjct: 2805 YSKASILQVSLLFPKS 2758
Score = 39.1 bits (79), Expect(4) = 1e-53
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -3 / -1
Query: 352 QI*V*HYPGQVGLTARRQLTSMKGYFQYLS 263
Q *+*HYP GLT R+QL SM+ Q+LS
Sbjct: 2491 QT*L*HYPRVAGLTVRKQLVSMRESLQFLS 2402
Score = 23.1 bits (44), Expect(4) = 1e-53
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 633 NLMELQYAAAIIW 595
+L +LQ AAAIIW
Sbjct: 3029 HLRQLQSAAAIIW 2991
Score = 76.2 bits (160), Expect(3) = 2e-31
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = -3 / -1
Query: 583 YITVSPKWRPQCSCSAAAQAIRILPYPTFRNHIIYKY*ISYLWTI*LWLGIQK*NTGI 410
YITV KWR C+C A QAI+ILPY F+N+IIY+Y*IS L T * L IQK N+GI
Sbjct: 2980 YITVLSKWRL*CNC*TATQAIQILPYRIFQNYIIYRY*ISCL*TA*QSLNIQKQNSGI 2807
Score = 68.4 bits (143), Expect(3) = 2e-31
Identities = 35/53 (66%), Positives = 35/53 (66%)
Frame = -2 / -1
Query: 161 CPXXXXXXXXXXSNTEKLTSRDWTFCISILRTVSPGILPA*SVLVSTI*S*TP 3
CP S TEKLTSRD TFCIS LRTVSPGILPA* LVS *S* P
Sbjct: 2215 CPYLLFSSSRYRSKTEKLTSRDCTFCISTLRTVSPGILPA*IGLVSVT*S*AP 2057
Score = 36.8 bits (74), Expect(3) = 2e-31
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 357 ILRSEYDIIQDKLV*LRGGN*LP*KDTFNISR 262
+ + +YDIIQ+ LV*L G N* P*++ FN R
Sbjct: 2496 LYKPDYDIIQE*LV*L*GSN*FP*ENPFNFFR 2401
>LOC_Os01g41600:12001.t03681:unspliced-genomic membrane protein-like, putative, expressed|
Length = 2283
Score = 57.0 bits (118), Expect = 1e-07
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +1 / +1
Query: 43 AGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFDSDI 189
AGR GD VLKI+MQK++SL++ S LE Y + LN RYG D + +
Sbjct: 1210 AGRFHGDAVLKIMMQKMRSLELGLSTLEDYTKALNHRYGAKLPDLHTGL 1356
Score = 31.3 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 122 NTEKLTSRDWTFCISILRTVSPGILPA 42
+ E+ +SRD FCI IL T SP PA
Sbjct: 1289 SVERPSSRDRIFCIMILSTASPWNRPA 1209
>LOC_Os06g43340:12006.t04024:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5876
Score = 25.8 bits (50), Expect(2) = 1.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / +1
Query: 374 LSRNRSYSDLSMTLSRTS 321
LSR R Y+D S+TL++ S
Sbjct: 4138 LSRERKYNDQSITLAKLS 4191
Score = 24.9 bits (48), Expect(2) = 1.4
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 232 STPILSSPRVHLC 194
+TP+LSSP+ H C
Sbjct: 4259 ATPLLSSPQSHSC 4297
>LOC_Os11g31990:12011.t02796:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5991
Score = 26.3 bits (51), Expect(2) = 2.5
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -3 / +2
Query: 232 STPILSSPRVHLCY 191
+TP+LSSP+ H C+
Sbjct: 3923 ATPLLSSPQSHSCF 3964
Score = 23.5 bits (45), Expect(2) = 2.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2 / +1
Query: 374 LSRNRSYSDLSMTLSRTSWSNCEEATDF 291
LSR R Y+D S+T ++ S + ++ F
Sbjct: 3802 LSRERKYNDQSITSAKLSTTQRQDIHRF 3885
>LOC_Os08g44340:12008.t04158:unspliced-genomic monodehydroascorbate reductase, putative, expressed|
Length = 3313
Score = 31.3 bits (62), Expect(2) = 2.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1 / +1
Query: 490 DFEKLDRVKSGWLVLLLSSCIVASILVIQ*CMYSSPYNRGCIL 618
DF D + G+++ L C V ++ Q*C+YS GC L
Sbjct: 3070 DFVSSDPIYGGFVLFSL*ICDVVTVARSQ*CLYSVASVIGCFL 3198
Score = 22.6 bits (43), Expect(2) = 2.9
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +3 / +3
Query: 399 LCCDIPVFYFW 431
+CC P +FW
Sbjct: 1896 ICCSAPSLHFW 1928
>LOC_Os08g03930:12008.t00288:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5801
Score = 24.9 bits (48), Expect(2) = 6.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 232 STPILSSPRVHLC 194
+TP+LSSP+ H C
Sbjct: 4142 ATPLLSSPQSHSC 4180
Score = 23.5 bits (45), Expect(2) = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2 / +1
Query: 374 LSRNRSYSDLSMTLSRTSWSNCEEATDF 291
LSR R Y+D S T ++ S + ++ F
Sbjct: 4021 LSRERKYNDQSTTSAKLSMTQRQDIRRF 4104
>LOC_Os11g09300:12011.t00822:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5563
Score = 24.9 bits (48), Expect(2) = 6.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +1
Query: 232 STPILSSPRVHLC 194
+TP+LSSP+ H C
Sbjct: 4159 ATPLLSSPQSHSC 4197
Score = 23.5 bits (45), Expect(2) = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 374 LSRNRSYSDLSMTLSRTS 321
LSR R Y+D S TL + S
Sbjct: 4038 LSRERKYNDQSTTLVKLS 4091
>LOC_Os06g44730:12006.t04160:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 3525
Score = 25.4 bits (49), Expect(2) = 6.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3 / +3
Query: 229 TPILSSPRVHLCYQYQNQ 176
TP+LSSP+ H C + ++
Sbjct: 1677 TPLLSSPQSHSCLLFSSR 1730
Score = 23.1 bits (44), Expect(2) = 6.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2 / +2
Query: 374 LSRNRSYSDLSMTLSRTS 321
LSR R Y+D S+T ++ S
Sbjct: 1553 LSRGRKYNDQSITSAKLS 1606
>LOC_Os07g40260:12007.t03686:unspliced-genomic pepsin A, putative, expressed|
Length = 8322
Score = 24.4 bits (47), Expect(2) = 8.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3 / -1
Query: 280 YFQYLSQSHFCC 245
+F YL Q H CC
Sbjct: 2652 WFHYLRQCHVCC 2617
Score = 23.5 bits (45), Expect(2) = 8.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3 / -1
Query: 166 RFVHICC*VPLGTAPIQKSSH 104
R H+CC*+ LG + H
Sbjct: 2637 RQCHVCC*ISLGLTAMPFRQH 2575
>LOC_Os11g32880:12011.t02884:unspliced-genomic transcription-repair coupling factor, putative, expressed|
Length = 8185
Score = 25.8 bits (50), Expect(2) = 8.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1 / -2
Query: 477 NIEYHTYGQFSYG*ASKNKTQEYHNKAPILQVNLLIPKSLIL 352
N EY T+ FS+ + + Q H P Q+ + I KSL L
Sbjct: 1545 NNEYSTHCNFSFTKPNISTNQSVHWGFPFSQIFVNIYKSLSL 1420
Score = 22.1 bits (42), Expect(2) = 8.0
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -2 / -2
Query: 629 SWNYNMQPRLYGDEYIHHC 573
S N++++ Y +EY HC
Sbjct: 1578 SKNHSLKSSRYNNEYSTHC 1522
>LOC_Os11g23140:12011.t01983:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 6681
Score = 24.9 bits (48), Expect(2) = 8.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 232 STPILSSPRVHLC 194
+TP+LSSP+ H C
Sbjct: 3758 ATPLLSSPQSHSC 3796
Score = 23.1 bits (44), Expect(2) = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 374 LSRNRSYSDLSMTLSRTSWSNCEE 303
LSR R Y+D S+T + S + E+
Sbjct: 3637 LSRERKYNDQSITSVKLSTTQRED 3708
>LOC_Os04g23020:12004.t02030:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 4772
Score = 24.9 bits (48), Expect(2) = 8.4
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 232 STPILSSPRVHLC 194
+TP+LSSP+ H C
Sbjct: 3035 ATPLLSSPQSHSC 3073
Score = 23.1 bits (44), Expect(2) = 8.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 374 LSRNRSYSDLSMTLSRTS 321
LSR R Y+D S+T ++ S
Sbjct: 2914 LSRERKYNDQSITSAKLS 2967
>LOC_Os06g39600:12006.t03657:unspliced-genomic protein phosphatase 2C homolog 2, putative, expressed|
Length = 4630
Score = 24.4 bits (47), Expect(2) = 8.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 405 CDIPVFYFWM 434
CDI +F+FW+
Sbjct: 371 CDIYIFFFWL 400
Score = 23.5 bits (45), Expect(2) = 8.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2 / +1
Query: 281 SFHGSQLPPRS*TNLSWIMSYSDLSMSDFGI 373
SF GS+ PRS* + I++ S FG+
Sbjct: 232 SFRGSRGTPRS*VTPALILALSRRCKLGFGV 324
>LOC_Os04g54160:12004.t04889:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 3632
Score = 24.9 bits (48), Expect(2) = 8.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +1
Query: 232 STPILSSPRVHLC 194
+TP+LSSP+ H C
Sbjct: 2239 ATPLLSSPQSHSC 2277
Score = 23.1 bits (44), Expect(2) = 8.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 374 LSRNRSYSDLSMTLSRTS 321
LSR R Y+D S+T ++ S
Sbjct: 2118 LSRERKYNDQSITSAKLS 2171
>LOC_Os05g25290:12005.t02185:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 2614
Score = 24.9 bits (48), Expect(2) = 8.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 232 STPILSSPRVHLC 194
+TP+LSSP+ H C
Sbjct: 932 ATPLLSSPQSHSC 970
Score = 23.1 bits (44), Expect(2) = 8.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 374 LSRNRSYSDLSMTLSRTS 321
LSR R Y+D S+T ++ S
Sbjct: 811 LSRERKYNDQSITSAKLS 864
>LOC_Os11g06500:12011.t00542:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 2328
Score = 24.9 bits (48), Expect(2) = 8.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3 / +2
Query: 232 STPILSSPRVHLCYQYQNQ 176
+TP+LSSP H C +Q
Sbjct: 1643 ATPLLSSPHSHSCLLLPSQ 1699
Score = 23.1 bits (44), Expect(2) = 8.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 374 LSRNRSYSDLSMTLSRTS 321
LSR R Y+D S+T ++ S
Sbjct: 1522 LSRERKYNDQSITSAKLS 1575
>LOC_Os12g04890:12012.t00377:unspliced-genomic transposon protein, putative, Mutator sub-class|
Length = 1602
Score = 30.9 bits (61), Expect = 9.7
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1 / +2
Query: 79 LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDF 177
++ ++ LD+S +++ +LEEL+ R+G F F
Sbjct: 1388 MLTLLKLLDLSQRIVQHWLEELDWRFGNFFNGF 1486
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 251,158,715
Number of extensions: 3731000
Number of successful extensions: 12438
Number of sequences better than 10.0: 33
Length of query: 227
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 178
Effective length of database: 52,856,264
Effective search space: 9408414992
Effective search space used: 9408414992
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)