ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf70j18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os01g65520:12001.t05916:unspliced-genomic membrane prote... 166 1e-89
2LOC_Os01g41600:12001.t03681:unspliced-genomic membrane prote... 57 1e-07
3LOC_Os12g04290:12012.t00318:unspliced-genomic PP2A regulator... 35 0.56
4LOC_Os06g43340:12006.t04024:unspliced-genomic retrotransposo... 26 1.4
5LOC_Os11g31990:12011.t02796:unspliced-genomic retrotransposo... 26 2.5
6LOC_Os03g47720:12003.t04132:unspliced-genomic ankyrin-like p... 33 2.7
7LOC_Os08g44340:12008.t04158:unspliced-genomic monodehydroasc... 31 2.9
8LOC_Os01g41650:12001.t03686:unspliced-genomic pentatricopept... 32 3.7
9LOC_Os05g34070:12005.t03002:unspliced-genomic nucleic acid b... 32 5.1
10LOC_Os04g08230:12004.t00693:unspliced-genomic retrotransposo... 32 5.1
11LOC_Os05g41560:12005.t03693:unspliced-genomic transposon pro... 32 5.1
12LOC_Os04g27100:12004.t02414:unspliced-genomic expressed protein 25 5.4
13LOC_Os08g03930:12008.t00288:unspliced-genomic retrotransposo... 25 6.1
14LOC_Os11g09300:12011.t00822:unspliced-genomic retrotransposo... 25 6.2
15LOC_Os06g44730:12006.t04160:unspliced-genomic retrotransposo... 25 6.4
16LOC_Os12g38760:12012.t03556:unspliced-genomic nucleotide pyr... 31 7.0
17LOC_Os09g12550:12009.t01045:unspliced-genomic expressed protein 31 7.0
18LOC_Os06g04660:12006.t00356:unspliced-genomic oxidoreductase... 31 7.0
19LOC_Os02g36264:12002.t03263:unspliced-genomic ent-kaurene sy... 31 7.0
20LOC_Os09g19800:12009.t01714:unspliced-genomic puromycin-sens... 30 7.3
21LOC_Os07g40260:12007.t03686:unspliced-genomic pepsin A, puta... 24 8.0
22LOC_Os11g32880:12011.t02884:unspliced-genomic transcription-... 26 8.0
23LOC_Os11g23140:12011.t01983:unspliced-genomic retrotransposo... 25 8.1
24LOC_Os04g23020:12004.t02030:unspliced-genomic retrotransposo... 25 8.4
25LOC_Os06g39600:12006.t03657:unspliced-genomic protein phosph... 24 8.4
26LOC_Os04g54160:12004.t04889:unspliced-genomic retrotransposo... 25 8.5
27LOC_Os05g25290:12005.t02185:unspliced-genomic retrotransposo... 25 8.8
28LOC_Os11g06500:12011.t00542:unspliced-genomic retrotransposo... 25 8.9
29LOC_Os06g37410:12006.t03436:unspliced-genomic helix-loop-hel... 31 9.7
30LOC_Os05g09490:12005.t00825:unspliced-genomic proteasome sub... 31 9.7
31LOC_Os04g40790:12004.t03640:unspliced-genomic conserved hypo... 31 9.7
32LOC_Os02g27130:12002.t02407:unspliced-genomic expressed protein 31 9.7
33LOC_Os12g04890:12012.t00377:unspliced-genomic transposon pro... 31 9.7

>LOC_Os01g65520:12001.t05916:unspliced-genomic membrane protein-like, putative, expressed|
          Length = 3808
 Score =  166 bits (356), Expect(4) = 1e-89
 Identities = 68/83 (81%), Positives = 74/83 (89%)
 Frame = +1 / +1

                                                                        
Query: 340  ILRSEYERFRDKQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIFNICRLYDFEKLDRVKS 519
            + RSE ERFR+KQ DLENRSF VIFL F+FGCLAIAKLSIGMIFN CRLY+FEK DRVKS
Sbjct: 2737 LCRSELERFREKQADLENRSFAVIFLSFVFGCLAIAKLSIGMIFNTCRLYNFEKFDRVKS 2916

                                   
Query: 520  GWLVLLLSSCIVASILVIQ*CMY 588
            GWLVLL SSCI+ASIL+IQ*C Y
Sbjct: 2917 GWLVLLFSSCIIASILIIQ*CTY 2985



 Score =  152 bits (326), Expect(4) = 1e-89
 Identities = 64/87 (73%), Positives = 70/87 (80%)
 Frame = +1 / +3

                                                                        
Query: 1    NGVHDQIVETRTLQAGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 180
            NG HDQ+ ETR +QAGRIPGDTVLK+LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD
Sbjct: 2055 NGAHDQVTETRPIQAGRIPGDTVLKVLMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFD 2234

                                       
Query: 181  SDIDNKDAXXXXXXXXXXXXQSSKNDF 261
            +DID KDA            + SK+DF
Sbjct: 2235 ADIDTKDALLEKIKLELKHLERSKDDF 2315



 Score = 53.3 bits (110), Expect(4) = 1e-89
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = +1 / +1

                                         
Query: 262  ARDIESILSWKSVASSQLDQLVLDNVILR 348
            A++IE ILSWK VASSQL+QL+LDNVI+R
Sbjct: 2401 AKEIEGILSWKLVASSQLNQLLLDNVIIR 2487



 Score = 26.7 bits (52), Expect(4) = 1e-89
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2 / +1

                         
Query: 593  LHIIAAAYCNSMR 631
            LHIIAAA CN +R
Sbjct: 2989 LHIIAAALCNCLR 3027



 Score =  150 bits (322), Expect(4) = 1e-79
 Identities = 61/80 (76%), Positives = 70/80 (87%)
 Frame = -2 / -3

                                                                        
Query: 584  IHHCITKMEATMQLLSSSTSHPDFTLSNFSKSYNLQILNIIPMDNLAMARHPKIKHRNIT 405
            +HHCI KMEA MQLL+S+TSHPDFTLSNFSK YNLQ+LNI+P+D+LA+A+HPK K RNIT
Sbjct: 2981 VHHCIIKMEAIMQLLNSNTSHPDFTLSNFSKLYNLQVLNIMPIDSLAIAKHPKTKLRNIT 2802

                                
Query: 404  TKLLFSKSTCLSRNRSYSDL 345
             KLLFSKS C SRN S SDL
Sbjct: 2801 AKLLFSKSACFSRNLSSSDL 2742



 Score =  134 bits (288), Expect(4) = 1e-79
 Identities = 60/87 (68%), Positives = 65/87 (74%)
 Frame = -3 / -2

                                                                        
Query: 262  QSHFCCSEAPSTPILSSPRVHLCYQYQNQNP*RFVHICC*VPLGTAPIQKSSHQEIGLSA 83
            QSH C S+  S PI  SPRVHL YQYQ+QNP*+F HIC  V L TAP QKSSHQEI  SA
Sbjct: 2316 QSHLCFSQDASAPI*FSPRVHLWYQYQHQNP*KFAHICYLVLLDTAPRQKSSHQEIAPSA 2137

                                       
Query: 82   SVS*ELYLQEFCQPEVSLSLQSDHEHH 2
             V *ELYLQE CQPE++LS   DHEHH
Sbjct: 2136 LVP*ELYLQESCQPELALSR*LDHEHH 2056



 Score = 54.2 bits (112), Expect(4) = 1e-79
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = -2 / -3

                                         
Query: 365  NRSYSDLSMTLSRTSWSNCEEATDFHERI 279
            N +Y++L MTLS++SW NCEEAT FHERI
Sbjct: 2504 NGNYTNLIMTLSKSSWFNCEEATSFHERI 2418



 Score = 25.4 bits (49), Expect(4) = 1e-79
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2 / -1

                         
Query: 632  TSWNYNMQPRLYG 594
            TS NY  QP+LYG
Sbjct: 3028 TSGNYKAQPQLYG 2990



 Score =  141 bits (303), Expect(4) = 3e-65
 Identities = 62/95 (65%), Positives = 73/95 (76%)
 Frame = +3 / +2

                                                                        
Query: 3    WCS*SDCRDKDTSGWQNSWRYSS*DTDAESPIS*CELFCIGAVPRGTQQQIWTNL*GF*F 182
            WCS*S  RDK  SGWQ+SWRYSS* T+AE  IS*CELFC+GAV R T+ QIW N *GF* 
Sbjct: 2057 WCS*SSYRDKANSGWQDSWRYSS*GTNAEGAIS*CELFCLGAVSRRTK*QIWANF*GF*C 2236

                                               
Query: 183  *Y**QRCTLGEDKIGVEGASEQQK*LCERY*KYPF 287
            *Y* QRCTLGE++IG E + E+Q+*LC  +  + F
Sbjct: 2237 *Y*YQRCTLGENQIGAEAS*EKQR*LCMLFYSHVF 2341



 Score =  112 bits (239), Expect(4) = 3e-65
 Identities = 54/81 (66%), Positives = 62/81 (76%)
 Frame = +3 / +3

                                                                        
Query: 345  QI*V*AISG*AG*LGE*ELCCDIPVFYFWMPSHS*IVHRYDIQYL*II*FRKVG*GKIRM 524
            QI  * ISG AG*LGE*+LCC+IP F FWM S  * V+R+DI YL*II*F K+ *GKI M
Sbjct: 2742 QIRT*KISGKAG*LGE*KLCCNIPEFCFWMFSDC*AVYRHDI*YL*II*F*KIR*GKIWM 2921

                                 
Query: 525  ACAAAEQLHCGLHFGDTVMYV 587
            AC A +QLH  LHF +TVMY+
Sbjct: 2922 ACVAVQQLHYSLHFDNTVMYL 2984



 Score = 37.3 bits (75), Expect(4) = 3e-65
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3 / +3

                                         
Query: 264  ERY*KYPFMEVSCLLAVRPTCPG*CHTQI 350
            ER *+   ME SC L V+P   G*CH Q+
Sbjct: 2403 ERN*RDSLMETSCFLTVKPATLG*CHNQV 2489



 Score = 24.9 bits (48), Expect(4) = 3e-65
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1 / +3

                           
Query: 589  SSPYNRGCIL*FHEV 633
            S+PYN GC L*  EV
Sbjct: 2985 STPYNCGCAL*LPEV 3029



 Score =  118 bits (253), Expect(3) = 1e-55
 Identities = 59/91 (64%), Positives = 63/91 (69%)
 Frame = +2 / +1

                                                                        
Query: 2    MVFMIRL*RQGHFRLAEFLEIQFLRY*CRKSNLLM*AFLYWSGT*RNSTADMDKSLRILI 181
            MV MI+L RQG FRLA FLEIQFLRY*CR+ NLLM*AFL WSG *+N  ADM K LRIL+
Sbjct: 2056 MVLMIKLPRQGQFRLAGFLEIQFLRY*CRRCNLLM*AFLSWSGI*KN*IADMGKFLRILM 2235

                                           
Query: 182  LILITKMHXXXXXXXXXXXFRAAKMTLREIL 274
            LILI KMH            R AKMTL   L
Sbjct: 2236 LILIPKMHSWRKSNWS*SILREAKMTLYAFL 2328



 Score =  111 bits (238), Expect(3) = 1e-55
 Identities = 55/80 (68%), Positives = 61/80 (76%)
 Frame = +2 / +2

                                                                        
Query: 344  SDLSMSDFGISRLTWRIGALL*YSCVLFLDA*P*LNCP*V*YSIFVDYMISKSWIG*NPD 523
            +D ++ DFG SRLTWRI ALL*YS VLFLD *  L+C * *Y I VDY+I K+ IG*N D
Sbjct: 2741 ADQNLKDFGKSRLTWRIEALL*YS*VLFLDV*RLLSCL*A*YLIPVDYIILKNSIG*NLD 2920

                                
Query: 524  GLCCC*AAALWPPFW*YSDV 583
            GLCCC A AL PPF *YSDV
Sbjct: 2921 GLCCCSAVAL*PPF**YSDV 2980



 Score = 32.7 bits (65), Expect(3) = 1e-55
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +2 / +2

                                          
Query: 263  REILKVSFHGSQLPPRS*TNLSWIMSYSDL 352
            R+ LK   HG+ L P S*T+ SWIMS S L
Sbjct: 2402 RKKLKGFSHGN*LLPHS*TSYSWIMS*SGL 2491



 Score =  121 bits (258), Expect(4) = 1e-53
 Identities = 58/87 (66%), Positives = 63/87 (72%)
 Frame = -1 / -3

                                                                        
Query: 261  KVIFAAXXXXXXXXXXXQECIFVINIRIKILKDLSISAVEFL*VPLQYRKAHIKRLDFLH 82
            KVIFA+           QECIF INI IKILK+L ISA+ F *+PLQ RKAHIKRL  LH
Sbjct: 2315 KVIFASLKMLQLQFDFLQECIFGINISIKILKNLPISAI*FF*IPLQDRKAHIKRLHLLH 2136

                                       
Query: 81   QYLKNCISRNSASLKCPCLYNLIMNTI 1
             YLKNCISRN ASL  PCL NLIM+TI
Sbjct: 2135 *YLKNCISRNPASLNWPCLGNLIMSTI 2055



 Score = 93.6 bits (198), Expect(4) = 1e-53
 Identities = 44/76 (57%), Positives = 51/76 (67%)
 Frame = -1 / -2

                                                                        
Query: 588  VHTSLYXXXXXXXXXXXXXHKPSGFYPIQLFEII*STNIEYHTYGQFSYG*ASKNKTQEY 409
            + TSLY             HKPS FYPI+ F+II*ST I+YH Y Q S  * SKNKTQEY
Sbjct: 2985 IGTSLYYQNGGYNATAEQQHKPSRFYPIEFFKII*STGIKYHAYRQLSNR*TSKNKTQEY 2806

                            
Query: 408  HNKAPILQVNLLIPKS 361
            ++KA ILQV+LL PKS
Sbjct: 2805 YSKASILQVSLLFPKS 2758



 Score = 39.1 bits (79), Expect(4) = 1e-53
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = -3 / -1

                                          
Query: 352  QI*V*HYPGQVGLTARRQLTSMKGYFQYLS 263
            Q *+*HYP   GLT R+QL SM+   Q+LS
Sbjct: 2491 QT*L*HYPRVAGLTVRKQLVSMRESLQFLS 2402



 Score = 23.1 bits (44), Expect(4) = 1e-53
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1 / -3

                         
Query: 633  NLMELQYAAAIIW 595
            +L +LQ AAAIIW
Sbjct: 3029 HLRQLQSAAAIIW 2991



 Score = 76.2 bits (160), Expect(3) = 2e-31
 Identities = 36/58 (62%), Positives = 42/58 (72%)
 Frame = -3 / -1

                                                                      
Query: 583  YITVSPKWRPQCSCSAAAQAIRILPYPTFRNHIIYKY*ISYLWTI*LWLGIQK*NTGI 410
            YITV  KWR  C+C  A QAI+ILPY  F+N+IIY+Y*IS L T *  L IQK N+GI
Sbjct: 2980 YITVLSKWRL*CNC*TATQAIQILPYRIFQNYIIYRY*ISCL*TA*QSLNIQKQNSGI 2807



 Score = 68.4 bits (143), Expect(3) = 2e-31
 Identities = 35/53 (66%), Positives = 35/53 (66%)
 Frame = -2 / -1

                                                                 
Query: 161  CPXXXXXXXXXXSNTEKLTSRDWTFCISILRTVSPGILPA*SVLVSTI*S*TP 3
            CP          S TEKLTSRD TFCIS LRTVSPGILPA*  LVS  *S* P
Sbjct: 2215 CPYLLFSSSRYRSKTEKLTSRDCTFCISTLRTVSPGILPA*IGLVSVT*S*AP 2057



 Score = 36.8 bits (74), Expect(3) = 2e-31
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = -1 / -2

                                            
Query: 357  ILRSEYDIIQDKLV*LRGGN*LP*KDTFNISR 262
            + + +YDIIQ+ LV*L G N* P*++ FN  R
Sbjct: 2496 LYKPDYDIIQE*LV*L*GSN*FP*ENPFNFFR 2401



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>LOC_Os01g41600:12001.t03681:unspliced-genomic membrane protein-like, putative, expressed|
          Length = 2283

 Score = 57.0 bits (118), Expect = 1e-07
 Identities = 24/49 (48%), Positives = 32/49 (65%)
 Frame = +1 / +1

                                                             
Query: 43   AGRIPGDTVLKILMQKVQSLDVSFSVLERYLEELNSRYGQIFKDFDSDI 189
            AGR  GD VLKI+MQK++SL++  S LE Y + LN RYG    D  + +
Sbjct: 1210 AGRFHGDAVLKIMMQKMRSLELGLSTLEDYTKALNHRYGAKLPDLHTGL 1356



 Score = 31.3 bits (62), Expect = 7.0
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2 / -2

                                       
Query: 122  NTEKLTSRDWTFCISILRTVSPGILPA 42
            + E+ +SRD  FCI IL T SP   PA
Sbjct: 1289 SVERPSSRDRIFCIMILSTASPWNRPA 1209



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>LOC_Os12g04290:12012.t00318:unspliced-genomic PP2A regulatory subunit TAP46, putative, expressed|
          Length = 4083

 Score = 35.0 bits (70), Expect = 0.56
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1 / -2

                                                       
Query: 343  LRSEYERFRDKQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIF 471
            L+ +Y+  +D+   L  R +  +F+CF F CL+    SI   F
Sbjct: 2159 LKGQYDTGKDQPKILLTRHWQSLFICFTFACLSFTARSISSSF 2031



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>LOC_Os06g43340:12006.t04024:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5876

 Score = 25.8 bits (50), Expect(2) = 1.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -2 / +1

                              
Query: 374  LSRNRSYSDLSMTLSRTS 321
            LSR R Y+D S+TL++ S
Sbjct: 4138 LSRERKYNDQSITLAKLS 4191



 Score = 24.9 bits (48), Expect(2) = 1.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3 / +2

                         
Query: 232  STPILSSPRVHLC 194
            +TP+LSSP+ H C
Sbjct: 4259 ATPLLSSPQSHSC 4297



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>LOC_Os11g31990:12011.t02796:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5991

 Score = 26.3 bits (51), Expect(2) = 2.5
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3 / +2

                          
Query: 232  STPILSSPRVHLCY 191
            +TP+LSSP+ H C+
Sbjct: 3923 ATPLLSSPQSHSCF 3964



 Score = 23.5 bits (45), Expect(2) = 2.5
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2 / +1

                                        
Query: 374  LSRNRSYSDLSMTLSRTSWSNCEEATDF 291
            LSR R Y+D S+T ++ S +  ++   F
Sbjct: 3802 LSRERKYNDQSITSAKLSTTQRQDIHRF 3885



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>LOC_Os03g47720:12003.t04132:unspliced-genomic ankyrin-like protein, putative|
          Length = 5964

 Score = 32.7 bits (65), Expect = 2.7
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1 / -1

                                                    
Query: 319  QLVLDNVILRSEYERFRDKQVDLENRSFVVIFLCFIFGCL 438
            +++LD  I+R  Y ++  KQ  L +   + ++LCFI   L
Sbjct: 4983 EIILDRPIIR*AYNKYTHKQRLLHSVENIFMYLCFIINVL 4864



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>LOC_Os08g44340:12008.t04158:unspliced-genomic monodehydroascorbate reductase, putative, expressed|
          Length = 3313

 Score = 31.3 bits (62), Expect(2) = 2.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1 / +1

                                                       
Query: 490  DFEKLDRVKSGWLVLLLSSCIVASILVIQ*CMYSSPYNRGCIL 618
            DF   D +  G+++  L  C V ++   Q*C+YS     GC L
Sbjct: 3070 DFVSSDPIYGGFVLFSL*ICDVVTVARSQ*CLYSVASVIGCFL 3198



 Score = 22.6 bits (43), Expect(2) = 2.9
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +3 / +3

                       
Query: 399  LCCDIPVFYFW 431
            +CC  P  +FW
Sbjct: 1896 ICCSAPSLHFW 1928



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>LOC_Os01g41650:12001.t03686:unspliced-genomic pentatricopeptide repeat protein PPR986-12, putative, expressed|
          Length = 3618

 Score = 32.2 bits (64), Expect = 3.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2 / -1

                                       
Query: 602  LYGDEYIHHCITKMEATMQLLSSSTSH 522
            LY  +  H C+T+  A+  LLSS TSH
Sbjct: 1980 LYSIQLSHVCLTRQIASQHLLSSRTSH 1900



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>LOC_Os05g34070:12005.t03002:unspliced-genomic nucleic acid binding protein, putative, expressed|
          Length = 3423

 Score = 31.8 bits (63), Expect = 5.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3 / -1

                                     
Query: 202  HLCYQYQNQNP*RFVHICC*VPLGT 128
            HLC QYQ  N *+ V + C +PL +
Sbjct: 2079 HLCLQYQKWNR*KCVLVLCCIPLSS 2005



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>LOC_Os04g08230:12004.t00693:unspliced-genomic retrotransposon, putative, centromere-specific|
          Length = 3256

 Score = 31.8 bits (63), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3 / +1

                                     
Query: 202  HLCYQYQNQNP*RFVHICC*VPLGT 128
            HLC   Q + P  F+ +CC  P+GT
Sbjct: 1762 HLCAYKQEELPSSFLGVCCSTPVGT 1836



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>LOC_Os05g41560:12005.t03693:unspliced-genomic transposon protein, putative, Mutator sub-class|
          Length = 8892

 Score = 31.8 bits (63), Expect = 5.1
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1 / +2

                                             
Query: 79   LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDF 177
            L+  ++ LD+S  +++ +LEEL+ R+G  F  F
Sbjct: 1745 LLTLLKLLDLSQRIVQHWLEELDWRFGNFFSGF 1843



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>LOC_Os04g27100:12004.t02414:unspliced-genomic expressed protein|
          Length = 24613

 Score = 24.9 bits (48), Expect(2) = 5.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3 / +3

                          
Query: 232   STPILSSPRVHLC 194
             +TP+LSSP+ H C
Sbjct: 15222 ATPLLSSPQSHSC 15260



 Score = 23.5 bits (45), Expect(2) = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2 / +2

                                     
Query: 374   LSRNRSYSDLSMTLSRTSWSNCEE 303
             LSR R Y+D S+T ++ S +  ++
Sbjct: 15101 LSRERKYNDQSITSAKLSMTQRQD 15172



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>LOC_Os08g03930:12008.t00288:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5801

 Score = 24.9 bits (48), Expect(2) = 6.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3 / +2

                         
Query: 232  STPILSSPRVHLC 194
            +TP+LSSP+ H C
Sbjct: 4142 ATPLLSSPQSHSC 4180



 Score = 23.5 bits (45), Expect(2) = 6.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2 / +1

                                        
Query: 374  LSRNRSYSDLSMTLSRTSWSNCEEATDF 291
            LSR R Y+D S T ++ S +  ++   F
Sbjct: 4021 LSRERKYNDQSTTSAKLSMTQRQDIRRF 4104



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>LOC_Os11g09300:12011.t00822:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5563

 Score = 24.9 bits (48), Expect(2) = 6.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3 / +1

                         
Query: 232  STPILSSPRVHLC 194
            +TP+LSSP+ H C
Sbjct: 4159 ATPLLSSPQSHSC 4197



 Score = 23.5 bits (45), Expect(2) = 6.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2 / +3

                              
Query: 374  LSRNRSYSDLSMTLSRTS 321
            LSR R Y+D S TL + S
Sbjct: 4038 LSRERKYNDQSTTLVKLS 4091



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>LOC_Os06g44730:12006.t04160:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3525

 Score = 25.4 bits (49), Expect(2) = 6.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3 / +3

                              
Query: 229  TPILSSPRVHLCYQYQNQ 176
            TP+LSSP+ H C  + ++
Sbjct: 1677 TPLLSSPQSHSCLLFSSR 1730



 Score = 23.1 bits (44), Expect(2) = 6.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2 / +2

                              
Query: 374  LSRNRSYSDLSMTLSRTS 321
            LSR R Y+D S+T ++ S
Sbjct: 1553 LSRGRKYNDQSITSAKLS 1606



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>LOC_Os12g38760:12012.t03556:unspliced-genomic nucleotide pyrophosphatase/phosphodiesterase, putative, expressed|
          Length = 3837

 Score = 31.3 bits (62), Expect = 7.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3 / -1

                                
Query: 282  PFMEVSCLLAVRPTCPG*CH 341
            PF E +C   + PTCP  CH
Sbjct: 1353 PFDERNCFFKIVPTCPSYCH 1294



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>LOC_Os09g12550:12009.t01045:unspliced-genomic expressed protein|
          Length = 7211

 Score = 31.3 bits (62), Expect = 7.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3 / +2

                                                    
Query: 316  LTARRQLTSMKGYFQYLSQSHFCCSEAPSTPILSSPRVHL 197
            LTA  +  S+   F Y+S   F  S  PS  + S P+VHL
Sbjct: 3176 LTAEVEFVSLN**FIYISFLIFSVSPCPSVDV*SHPKVHL 3295



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>LOC_Os06g04660:12006.t00356:unspliced-genomic oxidoreductase, 2OG-Fe oxygenase family protein, expressed|
          Length = 4347

 Score = 31.3 bits (62), Expect = 7.0
 Identities = 13/48 (27%), Positives = 28/48 (58%)
 Frame = -2 / -1

                                                            
Query: 632  TSWNYNMQPRLYGDEYIHHCITKMEATMQLLSSSTSHPDFTLSNFSKS 489
            + WN  ++   + +E   H  ++++ + ++L S+   PD+ L+NF KS
Sbjct: 4257 SQWNQIIERSSFINEKCIHIKSQLQHSQKILLSTE*GPDYQLTNFIKS 4114



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>LOC_Os02g36264:12002.t03263:unspliced-genomic ent-kaurene synthase B, chloroplast precursor, putative, expressed|
          Length = 12921

 Score = 31.3 bits (62), Expect = 7.0
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3 / -2

                                                       
Query: 139  PLGTAPIQKSSHQEIGLSASVS*ELYLQEFCQPEVSLSLQSDH 11
            P    PIQ SSH ++  S S+  +  L  +C P  + S  S H
Sbjct: 8210 PSVAVPIQPSSHHQLWASLSLCGDQPLTAYCCPTRTASCSSGH 8082



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>LOC_Os09g19800:12009.t01714:unspliced-genomic puromycin-sensitive aminopeptidase, putative|
          Length = 4910

 Score = 30.4 bits (60), Expect(2) = 7.3
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1 / +2

                                                    
Query: 373  KQVDLENRSFVVIFLCFIFGCLAIAKLSIGMIFNICRLYD 492
            K V  E + F++I++ F  GC     L+    F  CR +D
Sbjct: 2144 KLVSKEKK*FMLIYILFTQGCCLKESLTKISFFECCRFFD 2263



 Score = 22.6 bits (43), Expect(2) = 7.3
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2 / +1

                              
Query: 572  YSDVCTHLHIIAAAYCNS 625
            Y ++C HL  + + YC +
Sbjct: 2653 YVNLCPHLFCLGSNYCRA 2706



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>LOC_Os07g40260:12007.t03686:unspliced-genomic pepsin A, putative, expressed|
          Length = 8322

 Score = 24.4 bits (47), Expect(2) = 8.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3 / -1

                        
Query: 280  YFQYLSQSHFCC 245
            +F YL Q H CC
Sbjct: 2652 WFHYLRQCHVCC 2617



 Score = 23.5 bits (45), Expect(2) = 8.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3 / -1

                                 
Query: 166  RFVHICC*VPLGTAPIQKSSH 104
            R  H+CC*+ LG   +    H
Sbjct: 2637 RQCHVCC*ISLGLTAMPFRQH 2575



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>LOC_Os11g32880:12011.t02884:unspliced-genomic transcription-repair coupling factor, putative, expressed|
          Length = 8185

 Score = 25.8 bits (50), Expect(2) = 8.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1 / -2

                                                      
Query: 477  NIEYHTYGQFSYG*ASKNKTQEYHNKAPILQVNLLIPKSLIL 352
            N EY T+  FS+   + +  Q  H   P  Q+ + I KSL L
Sbjct: 1545 NNEYSTHCNFSFTKPNISTNQSVHWGFPFSQIFVNIYKSLSL 1420



 Score = 22.1 bits (42), Expect(2) = 8.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2 / -2

                               
Query: 629  SWNYNMQPRLYGDEYIHHC 573
            S N++++   Y +EY  HC
Sbjct: 1578 SKNHSLKSSRYNNEYSTHC 1522



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>LOC_Os11g23140:12011.t01983:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6681

 Score = 24.9 bits (48), Expect(2) = 8.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3 / +2

                         
Query: 232  STPILSSPRVHLC 194
            +TP+LSSP+ H C
Sbjct: 3758 ATPLLSSPQSHSC 3796



 Score = 23.1 bits (44), Expect(2) = 8.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2 / +1

                                    
Query: 374  LSRNRSYSDLSMTLSRTSWSNCEE 303
            LSR R Y+D S+T  + S +  E+
Sbjct: 3637 LSRERKYNDQSITSVKLSTTQRED 3708



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>LOC_Os04g23020:12004.t02030:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4772

 Score = 24.9 bits (48), Expect(2) = 8.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3 / +2

                         
Query: 232  STPILSSPRVHLC 194
            +TP+LSSP+ H C
Sbjct: 3035 ATPLLSSPQSHSC 3073



 Score = 23.1 bits (44), Expect(2) = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2 / +1

                              
Query: 374  LSRNRSYSDLSMTLSRTS 321
            LSR R Y+D S+T ++ S
Sbjct: 2914 LSRERKYNDQSITSAKLS 2967



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>LOC_Os06g39600:12006.t03657:unspliced-genomic protein phosphatase 2C homolog 2, putative, expressed|
          Length = 4630

 Score = 24.4 bits (47), Expect(2) = 8.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3 / +2

                     
Query: 405 CDIPVFYFWM 434
           CDI +F+FW+
Sbjct: 371 CDIYIFFFWL 400



 Score = 23.5 bits (45), Expect(2) = 8.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2 / +1

                                          
Query: 281 SFHGSQLPPRS*TNLSWIMSYSDLSMSDFGI 373
           SF GS+  PRS*   + I++ S      FG+
Sbjct: 232 SFRGSRGTPRS*VTPALILALSRRCKLGFGV 324



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>LOC_Os04g54160:12004.t04889:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3632

 Score = 24.9 bits (48), Expect(2) = 8.5
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3 / +1

                         
Query: 232  STPILSSPRVHLC 194
            +TP+LSSP+ H C
Sbjct: 2239 ATPLLSSPQSHSC 2277



 Score = 23.1 bits (44), Expect(2) = 8.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2 / +3

                              
Query: 374  LSRNRSYSDLSMTLSRTS 321
            LSR R Y+D S+T ++ S
Sbjct: 2118 LSRERKYNDQSITSAKLS 2171



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>LOC_Os05g25290:12005.t02185:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2614

 Score = 24.9 bits (48), Expect(2) = 8.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3 / +2

                        
Query: 232 STPILSSPRVHLC 194
           +TP+LSSP+ H C
Sbjct: 932 ATPLLSSPQSHSC 970



 Score = 23.1 bits (44), Expect(2) = 8.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2 / +1

                             
Query: 374 LSRNRSYSDLSMTLSRTS 321
           LSR R Y+D S+T ++ S
Sbjct: 811 LSRERKYNDQSITSAKLS 864



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>LOC_Os11g06500:12011.t00542:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2328

 Score = 24.9 bits (48), Expect(2) = 8.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3 / +2

                               
Query: 232  STPILSSPRVHLCYQYQNQ 176
            +TP+LSSP  H C    +Q
Sbjct: 1643 ATPLLSSPHSHSCLLLPSQ 1699



 Score = 23.1 bits (44), Expect(2) = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2 / +1

                              
Query: 374  LSRNRSYSDLSMTLSRTS 321
            LSR R Y+D S+T ++ S
Sbjct: 1522 LSRERKYNDQSITSAKLS 1575



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>LOC_Os06g37410:12006.t03436:unspliced-genomic helix-loop-helix DNA-binding domain containing protein|
          Length = 3819

 Score = 30.9 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3 / +3

                                                   
Query: 634 KPHGITICSRDYMEMSTYITVSPKWRPQCSCSAAAQAIRI 515
           +P     CSR     S   T +P+WR +CS S+    +R+
Sbjct: 852 RPRCTAACSRLSTASSRAPTTTPRWRRRCSRSSPPPRLRL 971



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>LOC_Os05g09490:12005.t00825:unspliced-genomic proteasome subunit beta type 7-A precursor, putative, expressed|
          Length = 3180

 Score = 30.9 bits (61), Expect = 9.7
 Identities = 15/66 (22%), Positives = 27/66 (40%)
 Frame = -2 / -2

                                                                        
Query: 584  IHHCITKMEATMQLLSSSTSHPDFTLSNFSKSYNLQILNIIPMDNLAMARHPKIKHRNIT 405
            +H C+      +     ST+   F  S+ S      +LN+    N++   H  I   ++T
Sbjct: 3122 LHKCVENQLKDVH*AQGSTTRVIFFCSSISTEMKAYVLNVTACLNVSTQNHSSIASPSVT 2943

                  
Query: 404  TKLLFS 387
            +   FS
Sbjct: 2942 STFGFS 2925



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>LOC_Os04g40790:12004.t03640:unspliced-genomic conserved hypothetical protein|
          Length = 2372

 Score = 30.9 bits (61), Expect = 9.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3 / +3

                                      
Query: 571 SPKWRPQCSCSAAAQAIRILPYPTFRN 491
           +P WR +   S A +A+++L Y  FRN
Sbjct: 693 APPWRVEPRTSGATEALKLLGYRPFRN 773



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>LOC_Os02g27130:12002.t02407:unspliced-genomic expressed protein|
          Length = 20168

 Score = 30.9 bits (61), Expect = 9.7
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = -2 / -2

                                                
Query: 509   LSNFSKSYNLQILNIIPMDNLAMARHPKIKHRNIT 405
             LSN +    L I NII        RHPKIK R+ T
Sbjct: 16384 LSNVTLEITLLICNIIAHATAMAIRHPKIKARSNT 16280



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>LOC_Os12g04890:12012.t00377:unspliced-genomic transposon protein, putative, Mutator sub-class|
          Length = 1602

 Score = 30.9 bits (61), Expect = 9.7
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +1 / +2

                                             
Query: 79   LMQKVQSLDVSFSVLERYLEELNSRYGQIFKDF 177
            ++  ++ LD+S  +++ +LEEL+ R+G  F  F
Sbjct: 1388 MLTLLKLLDLSQRIVQHWLEELDWRFGNFFNGF 1486


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 251,158,715
Number of extensions: 3731000
Number of successful extensions: 12438
Number of sequences better than 10.0: 33
Length of query: 227
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 178
Effective length of database: 52,856,264
Effective search space: 9408414992
Effective search space used: 9408414992
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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