| Clone Name | FLbaf70j18 |
|---|---|
| Clone Library Name | barley_pub |
>Q9UTR7:MCP3_SCHPO Meiotic coiled-coil protein 3 - Schizosaccharomyces pombe (Fission| yeast) Length = 952 Score = 35.4 bits (80), Expect = 0.20 Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 18/170 (10%) Frame = +1 Query: 1 NGVHDQIVETRTLQAGRIPGDTVLKILMQKVQSLDVSFSVL---ERYLEELNSRYGQIFK 171 N +++ + R L+ +K L+++ QSL + + E+ L E+N+ Y K Sbjct: 315 NSINEIQTQNRDLKLETEKLQDQIKALLERNQSLQEALETVKNDEKNLREMNANYETEMK 374 Query: 172 DFDSDIDNKDAXXXXXXXXXXXXQ---SSKNDFARDIESILSWKSVASSQLDQLV----- 327 + ++NK+A + S ++ R+ +L ++S S Q D L Sbjct: 375 EARQKLNNKEALISHYDDDFRAKELKISRLSESLREKAGLLEFQSSVSEQRDLLYQEQIQ 434 Query: 328 -----LDNVILRSEY--ERFRDKQVDLENRSFVVIFLCFIFGCLAIAKLS 456 ++NV ++EY E + + +LE S V+ L CL +LS Sbjct: 435 SSIKDMENVFRKNEYLMEELNELKNNLEVESSKVLRLDEEMKCLKDEQLS 484
>Q87WV5:HISX_PSESM Histidinol dehydrogenase - Pseudomonas syringae pv. tomato| Length = 448 Score = 33.9 bits (76), Expect = 0.59 Identities = 18/47 (38%), Positives = 30/47 (63%) Frame = +1 Query: 256 DFARDIESILSWKSVASSQLDQLVLDNVILRSEYERFRDKQVDLENR 396 DFAR ++ +LSW+SV+ ++Q VLD I+++ ER V+L + Sbjct: 16 DFARHLDHLLSWESVSDDSVNQRVLD--IIKAVRERGDAALVELTQK 60
>Q48EC9:HISX_PSE14 Histidinol dehydrogenase - Pseudomonas syringae pv. phaseolicola| (strain 1448A / Race 6) Length = 448 Score = 33.9 bits (76), Expect = 0.59 Identities = 17/47 (36%), Positives = 30/47 (63%) Frame = +1 Query: 256 DFARDIESILSWKSVASSQLDQLVLDNVILRSEYERFRDKQVDLENR 396 DFAR ++ +LSW+SV+ ++Q VLD I+++ ER + V+ + Sbjct: 16 DFARHLDHLLSWESVSDDSVNQRVLD--IIKAVRERGDEALVEFTQK 60
>Q4ZNV9:HISX_PSEU2 Histidinol dehydrogenase - Pseudomonas syringae pv. syringae| (strain B728a) Length = 448 Score = 33.5 bits (75), Expect = 0.76 Identities = 16/36 (44%), Positives = 26/36 (72%) Frame = +1 Query: 256 DFARDIESILSWKSVASSQLDQLVLDNVILRSEYER 363 DFAR ++ +LSW+SV+ ++Q VLD I+++ ER Sbjct: 16 DFARHLDHLLSWESVSDDSVNQRVLD--IIKAVRER 49
>Q4KI73:HISX_PSEF5 Histidinol dehydrogenase - Pseudomonas fluorescens (strain Pf-5 /| ATCC BAA-477) Length = 442 Score = 33.5 bits (75), Expect = 0.76 Identities = 16/36 (44%), Positives = 26/36 (72%) Frame = +1 Query: 256 DFARDIESILSWKSVASSQLDQLVLDNVILRSEYER 363 DFAR ++ +LSW+SV+ ++Q VLD I+++ ER Sbjct: 16 DFARHLDHLLSWESVSDDSVNQRVLD--IIKAVRER 49
>P59400:HISX_PSEPK Histidinol dehydrogenase - Pseudomonas putida (strain KT2440)| Length = 441 Score = 33.1 bits (74), Expect = 1.00 Identities = 16/36 (44%), Positives = 26/36 (72%) Frame = +1 Query: 256 DFARDIESILSWKSVASSQLDQLVLDNVILRSEYER 363 DFAR ++ +LSW+SV+ ++Q VLD I+++ ER Sbjct: 16 DFARHLDHLLSWESVSDDAVNQRVLD--IIKAVRER 49
>Q08831:VTS1_YEAST Protein VTS1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 523 Score = 32.0 bits (71), Expect = 2.2 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 9/64 (14%) Frame = +1 Query: 241 QSSKND------FARDIESILSWKSVASSQLDQLVLDNV--ILRSEYERFRDKQVD-LEN 393 QS KND F++DI + SW S+ +S V+DN+ IL + ++ +++ L N Sbjct: 176 QSQKNDPNMGTNFSQDINQLCSWISMLNSSQQNTVMDNILSILNDDVLKYTKLKIETLTN 235 Query: 394 RSFV 405 F+ Sbjct: 236 TPFI 239
>Q3KHZ2:HISX_PSEPF Histidinol dehydrogenase - Pseudomonas fluorescens (strain PfO-1)| Length = 441 Score = 31.6 bits (70), Expect = 2.9 Identities = 15/36 (41%), Positives = 25/36 (69%) Frame = +1 Query: 256 DFARDIESILSWKSVASSQLDQLVLDNVILRSEYER 363 DFA ++ +LSW+SV+ ++Q VLD I+++ ER Sbjct: 16 DFAHHLDHLLSWESVSDDSVNQRVLD--IIKAVRER 49
>Q9HVW9:HISX_PSEAE Histidinol dehydrogenase - Pseudomonas aeruginosa| Length = 440 Score = 31.2 bits (69), Expect = 3.8 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 256 DFARDIESILSWKSVASSQLDQLVLD 333 DF R ++ +LSW+SV+ ++Q VLD Sbjct: 16 DFGRHLDHLLSWESVSDDSVNQRVLD 41 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 108,307,723 Number of extensions: 2148491 Number of successful extensions: 5498 Number of sequences better than 10.0: 9 Number of HSP's gapped: 5495 Number of HSP's successfully gapped: 9 Length of query: 227 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 118 Effective length of database: 70,788,284 Effective search space: 8353017512 Effective search space used: 8353017512 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)