ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf70j04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068479:Os03g0127000 168 3e-42
2Os06g0159700:Os06g0159700 30 2.4
3AK067093:Os03g0775700 28 5.4
4AK073779:Os12g0639100 28 7.0
5AK063391:Os12g0639100 28 7.0
6AK060068:Os12g0639100 28 7.0
7AK064575:Os02g0554000 28 9.2

>AK068479:Os03g0127000 |
          Length = 114
 Score =  168 bits (426), Expect = 3e-42
 Identities = 83/90 (92%), Positives = 87/90 (96%)
 Frame = +1

Query: 175 KFFAPMLLKYGMVILFNVTMWGCYVNSLKALSSLQATVTNFAANFISSGLAGYFLFQEPL 354
           KFFAP LLKY MVILFNVTMWGCYVNSLKALSSLQATVTNFAANFISSGLAGYFLF+EPL
Sbjct: 25  KFFAPPLLKYSMVILFNVTMWGCYVNSLKALSSLQATVTNFAANFISSGLAGYFLFEEPL 84

Query: 355 PSKWFAGASLIILGVFILSKSSIEEKVNSD 444
           PSKWF GASLII+GVFILSKSSIE+K+NSD
Sbjct: 85  PSKWFVGASLIIVGVFILSKSSIEKKLNSD 114



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>Os06g0159700:Os06g0159700 |
          Length = 297

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +2

Query: 35  RRPLR*FTAARGVDLWRE--RDELRWRAEADTPGPSRRASTPRSPLYQPSSLPPCCS 199
           RRP     A +G   WRE  R   RWRA          A+  R   ++PSS+   CS
Sbjct: 180 RRP----AAEQGARRWREGERRPTRWRARRRRVAARGTAAGERGRAHRPSSIAMACS 232



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>AK067093:Os03g0775700 |
          Length = 943

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 754 NAKNK*MIHRQC*SSSKRPHHEYKPKEATP 665
           ++ N  ++ R   SSS+RPH   KP++A P
Sbjct: 38  SSSNAAVLPRDSHSSSQRPHRSQKPQQAAP 67



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>AK073779:Os12g0639100 |
          Length = 526

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
 Frame = +1

Query: 205 GMVILFNVTMWGCYVN-SLKALSSLQA--TVTNFAANFISSGLAGYFLFQEPLPSKWFAG 375
           G+  + N++  G  +  S K  S+L +  ++ NF+  F +  ++ +FL    +   +F G
Sbjct: 330 GLATVNNISQIGGSLGYSTKETSTLVSLWSIWNFSGRFGAGYISDHFLRSRGVGRPFFIG 389

Query: 376 ASLII--LGVFILSKSSIEEKVNSD*LIGSCY 465
            +L++  LG  I++   +        L+G CY
Sbjct: 390 VTLLVMSLGHAIIASGILASLYVGSVLVGLCY 421



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>AK063391:Os12g0639100 |
          Length = 526

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
 Frame = +1

Query: 205 GMVILFNVTMWGCYVN-SLKALSSLQA--TVTNFAANFISSGLAGYFLFQEPLPSKWFAG 375
           G+  + N++  G  +  S K  S+L +  ++ NF+  F +  ++ +FL    +   +F G
Sbjct: 330 GLATVNNISQIGGSLGYSTKETSTLVSLWSIWNFSGRFGAGYISDHFLRSRGVGRPFFIG 389

Query: 376 ASLII--LGVFILSKSSIEEKVNSD*LIGSCY 465
            +L++  LG  I++   +        L+G CY
Sbjct: 390 VTLLVMSLGHAIIASGILASLYVGSVLVGLCY 421



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>AK060068:Os12g0639100 |
          Length = 356

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
 Frame = +1

Query: 205 GMVILFNVTMWGCYVN-SLKALSSLQA--TVTNFAANFISSGLAGYFLFQEPLPSKWFAG 375
           G+  + N++  G  +  S K  S+L +  ++ NF+  F +  ++ +FL    +   +F G
Sbjct: 160 GLATVNNISQIGGSLGYSTKETSTLVSLWSIWNFSGRFGAGYISDHFLRSRGVGRPFFIG 219

Query: 376 ASLII--LGVFILSKSSIEEKVNSD*LIGSCY 465
            +L++  LG  I++   +        L+G CY
Sbjct: 220 VTLLVMSLGHAIIASGILASLYVGSVLVGLCY 251



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>AK064575:Os02g0554000 |
          Length = 637

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 303 GGEVGDSCLEGRQSFEAVHVAPPHCHIEKY 214
           GGEV D+C +G       H   P+C  EK+
Sbjct: 256 GGEVIDACTKGNLGRFINHSCSPNCRTEKW 285


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,272,622
Number of extensions: 549962
Number of successful extensions: 1564
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1563
Number of HSP's successfully gapped: 7
Length of query: 259
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 160
Effective length of database: 11,435,796
Effective search space: 1829727360
Effective search space used: 1829727360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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