| Clone Name | FLbaf70j04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ245967.1| Zea mays clone 93640 mRNA sequence Length = 823 Score = 856 bits (432), Expect = 0.0 Identities = 562/605 (92%), Gaps = 4/605 (0%) Strand = Plus / Plus Query: 31 gcatcggcgaccacttcgctagtttactgcagcgaggggagtggatctctggcgagaacg 90 ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| | Sbjct: 7 gcatcggcgaccacttcgctagtttgctgcagcgtggggagtggatctccggcgagagca 66 Query: 91 agacgagctccgatggcgagcggaggcggatacgcctgggccctcgcggcgggcctcaac 150 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 67 agactagctccgatggcgagccgaggcggatacgcctgggccctcgcggcgggcctcaac 126 Query: 151 gccgcgctcgccgctatatcagccaagttctttgcccccatgttgctcaaatacggcatg 210 |||||||||||||| || || ||||||||||| || |||||||||||||||||||| ||| Sbjct: 127 gccgcgctcgccgccatctccgccaagttcttcgcgcccatgttgctcaaatacggaatg 186 Query: 211 gtgatacttttcaatgtgacaatgtgggggtgctacgtgaacagcctcaaagctttgtcg 270 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 gtgatacttttcaacgtgacaatgtgggggtgctacgtgaacagcctcaaagctttgtcg 246 Query: 271 tccctccaggcaactgtcaccaacttcgccgccaacttcatctcgtcgggtcttgcaggg 330 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 247 tccctccaggcaacggtcaccaacttcgccgccaacttcatctcgtcaggtcttgcaggg 306 Query: 331 tatttcctgtttcaggaacctctgccttctaagtggtttgcaggtgccagtttgatcatt 390 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 307 tatttcctgtttcaggaacctctgccttctaagtggtttgcaggtgccagtctgatcatt 366 Query: 391 cttggcgtgttcatcctcagcaaatcaagtatagaggagaaagtgaactctgattgattg 450 ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 367 cttggtgtgttcatcctcagcaaatcaagtattgaggagaaagtgaactc----tgattg 422 Query: 451 attgggagttgctaccagtatgttagctggggcataaattttttgagcttacgcctctat 510 ||||||||||||||||||| ||||||||||| |||||||||| |||||| ||| ||| Sbjct: 423 attgggagttgctaccagtctgttagctgggacataaattttgcaagcttattcctatat 482 Query: 511 ttctagtggatgtttgctcgtcctgatgcaatgcttaacatccgaaaataatgtgtgcat 570 ||| ||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 483 ttccagtggctgtgtgctcgtcctgatgcaatgctaagtatccgaaaataatgtgtgcat 542 Query: 571 ttggtctcagctcatcaactaatatgtacactagtacggtttgagatccaccacccaaat 630 |||||||||||||||| ||||| |||||||||||||| |||| |||| |||||||||| | Sbjct: 543 ttggtctcagctcatccactaacatgtacactagtacagtttaagatacaccacccaatt 602 Query: 631 tgtaa 635 ||||| Sbjct: 603 tgtaa 607 Score = 87.7 bits (44), Expect = 5e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 606 acggtttgagatccaccacccaaattgtaatttgtaagtaagaagtgcgcacacaatgta 665 ||||||| |||| |||||||||| ||||||||||||||||||||||| ||||| || || Sbjct: 607 acggtttaagatacaccacccaatttgtaatttgtaagtaagaagtgagcacatgatcta 666 Query: 666 ggagttgcttcctttggttt 685 ||||||||| ||||||||| Sbjct: 667 agagttgcttgctttggttt 686
>ref|NM_001055365.1| Oryza sativa (japonica cultivar-group) Os03g0127000 (Os03g0127000) mRNA, complete cds Length = 555 Score = 293 bits (148), Expect = 5e-76 Identities = 298/348 (85%) Strand = Plus / Plus Query: 96 agctccgatggcgagcggaggcggatacgcctgggccctcgcggcgggcctcaacgccgc 155 |||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct: 35 agctccgatggcacgcggaggcggctacgggtgggcgctcgcggcgggcctcaacgccgc 94 Query: 156 gctcgccgctatatcagccaagttctttgcccccatgttgctcaaatacggcatggtgat 215 ||||||||| || || ||||||||||| || || | | || |||||| |||||||||| Sbjct: 95 gctcgccgccatctccgccaagttcttcgcgcctccgcttctgaaatacagcatggtgat 154 Query: 216 acttttcaatgtgacaatgtgggggtgctacgtgaacagcctcaaagctttgtcgtccct 275 |||||||||||||||||||||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 155 acttttcaatgtgacaatgtggggctgctatgtgaacagcctcaaagcactgtcatccct 214 Query: 276 ccaggcaactgtcaccaacttcgccgccaacttcatctcgtcgggtcttgcagggtattt 335 ||| ||||| |||||||| || || ||||||||||| || || |||||||||||||| || Sbjct: 215 ccaagcaaccgtcaccaattttgctgccaacttcatttcatcaggtcttgcagggtactt 274 Query: 336 cctgtttcaggaacctctgccttctaagtggtttgcaggtgccagtttgatcattcttgg 395 ||||| |||| || ||||||||||||||||||| |||||| ||| | |||||| |||| Sbjct: 275 tctgttcgaggagccactgccttctaagtggtttgtaggtgctagtcttatcattgttgg 334 Query: 396 cgtgttcatcctcagcaaatcaagtatagaggagaaagtgaactctga 443 || || ||||| ||||||||||| || ||| ||||| |||||||||| Sbjct: 335 tgtttttatcctaagcaaatcaagcatcgagaagaaactgaactctga 382
>emb|CT829402.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI021O09, full insert sequence Length = 620 Score = 270 bits (136), Expect = 7e-69 Identities = 295/348 (84%) Strand = Plus / Plus Query: 96 agctccgatggcgagcggaggcggatacgcctgggccctcgcggcgggcctcaacgccgc 155 |||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 62 agctccgatggcacgcggaggcggctaccggtgggcgctcgcggcgggcctcaacgccgc 121 Query: 156 gctcgccgctatatcagccaagttctttgcccccatgttgctcaaatacggcatggtgat 215 ||||||||| || || ||||||||||| || || | | || |||||| |||||||||| Sbjct: 122 gctcgccgccatctccgccaagttcttcgcgcctccgcttctgaaatacagcatggtgat 181 Query: 216 acttttcaatgtgacaatgtgggggtgctacgtgaacagcctcaaagctttgtcgtccct 275 ||||||||||||||| |||||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 182 acttttcaatgtgaccatgtggggctgctatgtgaacagcctcaaagcactgtcatccct 241 Query: 276 ccaggcaactgtcaccaacttcgccgccaacttcatctcgtcgggtcttgcagggtattt 335 ||| ||||| |||||||| || || ||||||||||| || || ||||||||||||| || Sbjct: 242 ccaagcaaccgtcaccaattttgctgccaacttcatttcatcacgtcttgcagggtactt 301 Query: 336 cctgtttcaggaacctctgccttctaagtggtttgcaggtgccagtttgatcattcttgg 395 ||||| |||| || ||||||||||||||||||| |||||| ||| | |||||| |||| Sbjct: 302 tctgttcgaggagccactgccttctaagtggtttgtaggtgctagtcttatcattgttgg 361 Query: 396 cgtgttcatcctcagcaaatcaagtatagaggagaaagtgaactctga 443 || || ||||| ||||||||||| || ||| ||||| |||||||||| Sbjct: 362 tgtttttatcctaagcaaatcaagcatcgagaagaaactgaactctga 409
>dbj|AK068479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152D10, full insert sequence Length = 1381 Score = 238 bits (120), Expect = 2e-59 Identities = 231/268 (86%) Strand = Plus / Plus Query: 96 agctccgatggcgagcggaggcggatacgcctgggccctcgcggcgggcctcaacgccgc 155 |||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct: 36 agctccgatggcacgcggaggcggctacgggtgggcgctcgcggcgggcctcaacgccgc 95 Query: 156 gctcgccgctatatcagccaagttctttgcccccatgttgctcaaatacggcatggtgat 215 ||||||||| || || ||||||||||| || || | | || |||||| |||||||||| Sbjct: 96 gctcgccgccatctccgccaagttcttcgcgcctccgcttctgaaatacagcatggtgat 155 Query: 216 acttttcaatgtgacaatgtgggggtgctacgtgaacagcctcaaagctttgtcgtccct 275 |||||||||||||||||||||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 156 acttttcaatgtgacaatgtggggctgctatgtgaacagcctcaaagcactgtcatccct 215 Query: 276 ccaggcaactgtcaccaacttcgccgccaacttcatctcgtcgggtcttgcagggtattt 335 ||| ||||| |||||||| || || ||||||||||| || || |||||||||||||| || Sbjct: 216 ccaagcaaccgtcaccaattttgctgccaacttcatttcatcaggtcttgcagggtactt 275 Query: 336 cctgtttcaggaacctctgccttctaag 363 ||||| |||| || |||||||||||| Sbjct: 276 tctgttcgaggagccactgccttctaag 303 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 362 agtggtttgcaggtgccagtttgatcattcttggcgtgttcatcctcagcaaatcaagta 421 ||||||||| |||||| ||| | |||||| |||| || || ||||| ||||||||||| | Sbjct: 1127 agtggtttgtaggtgctagtcttatcattgttggtgtttttatcctaagcaaatcaagca 1186 Query: 422 tagaggagaaagtgaactctga 443 | ||| ||||| |||||||||| Sbjct: 1187 tcgagaagaaactgaactctga 1208
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07, complete sequence Length = 117612 Score = 168 bits (85), Expect = 2e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 199 aaatacggcatggtgatacttttcaatgtgacaatgtgggggtgctacgtgaacagcctc 258 |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 43321 aaatacagcatggtgatacttttcaatgtgacaatgtggggctgctatgtgaacagcctc 43262 Query: 259 aaagctttgtcgtccctccaggcaactgtcaccaacttcgccgccaacttcatctcgtcg 318 ||||| |||| |||||||| ||||| |||||||| || || ||||||||||| || || Sbjct: 43261 aaagcactgtcatccctccaagcaaccgtcaccaattttgctgccaacttcatttcatca 43202 Query: 319 ggtcttgcagggtatttcctgtttcaggaacctctgccttctaag 363 |||||||||||||| || ||||| |||| || |||||||||||| Sbjct: 43201 ggtcttgcagggtactttctgttcgaggagccactgccttctaag 43157 Score = 101 bits (51), Expect = 4e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 96 agctccgatggcgagcggaggcggatacgcctgggccctcgcggcgggcctcaacgccgc 155 |||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct: 43899 agctccgatggcacgcggaggcggctacgggtgggcgctcgcggcgggcctcaacgccgc 43840 Query: 156 gctcgccgctatatcagccaagttctt 182 ||||||||| || || ||||||||||| Sbjct: 43839 gctcgccgccatctccgccaagttctt 43813 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 362 agtggtttgcaggtgccagtttgatcattcttggcgtgttcatcctcagcaaatcaagta 421 ||||||||| |||||| ||| | |||||| |||| || || ||||| ||||||||||| | Sbjct: 42333 agtggtttgtaggtgctagtcttatcattgttggtgtttttatcctaagcaaatcaagca 42274 Query: 422 tagaggagaaagtgaactctga 443 | ||| ||||| |||||||||| Sbjct: 42273 tcgagaagaaactgaactctga 42252
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 168 bits (85), Expect = 2e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 199 aaatacggcatggtgatacttttcaatgtgacaatgtgggggtgctacgtgaacagcctc 258 |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1506146 aaatacagcatggtgatacttttcaatgtgacaatgtggggctgctatgtgaacagcctc 1506087 Query: 259 aaagctttgtcgtccctccaggcaactgtcaccaacttcgccgccaacttcatctcgtcg 318 ||||| |||| |||||||| ||||| |||||||| || || ||||||||||| || || Sbjct: 1506086 aaagcactgtcatccctccaagcaaccgtcaccaattttgctgccaacttcatttcatca 1506027 Query: 319 ggtcttgcagggtatttcctgtttcaggaacctctgccttctaag 363 |||||||||||||| || ||||| |||| || |||||||||||| Sbjct: 1506026 ggtcttgcagggtactttctgttcgaggagccactgccttctaag 1505982 Score = 101 bits (51), Expect = 4e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 96 agctccgatggcgagcggaggcggatacgcctgggccctcgcggcgggcctcaacgccgc 155 |||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct: 1506724 agctccgatggcacgcggaggcggctacgggtgggcgctcgcggcgggcctcaacgccgc 1506665 Query: 156 gctcgccgctatatcagccaagttctt 182 ||||||||| || || ||||||||||| Sbjct: 1506664 gctcgccgccatctccgccaagttctt 1506638 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 362 agtggtttgcaggtgccagtttgatcattcttggcgtgttcatcctcagcaaatcaagta 421 ||||||||| |||||| ||| | |||||| |||| || || ||||| ||||||||||| | Sbjct: 1505158 agtggtttgtaggtgctagtcttatcattgttggtgtttttatcctaagcaaatcaagca 1505099 Query: 422 tagaggagaaagtgaactctga 443 | ||| ||||| |||||||||| Sbjct: 1505098 tcgagaagaaactgaactctga 1505077
>emb|AL954677.8| Zebrafish DNA sequence from clone DKEY-13J14 in linkage group 8, complete sequence Length = 186836 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 732 atcatttatttattttttgcatt 754 ||||||||||||||||||||||| Sbjct: 20408 atcatttatttattttttgcatt 20430
>emb|CU041292.6| Human DNA sequence from clone XX-DSH1_29E11, complete sequence Length = 112322 Score = 44.1 bits (22), Expect = 0.74 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 actctgattgattgattgggag 458 |||||||||||||||||||||| Sbjct: 73415 actctgattgattgattgggag 73394
>emb|CR931799.11| Zebrafish DNA sequence from clone DKEY-65J4 in linkage group 10, complete sequence Length = 217990 Score = 44.1 bits (22), Expect = 0.74 Identities = 22/22 (100%) Strand = Plus / Plus Query: 734 catttatttattttttgcattt 755 |||||||||||||||||||||| Sbjct: 7732 catttatttattttttgcattt 7753
>emb|CR450840.18| Zebrafish DNA sequence from clone CH211-261D9 in linkage group 14, complete sequence Length = 194617 Score = 44.1 bits (22), Expect = 0.74 Identities = 22/22 (100%) Strand = Plus / Plus Query: 731 gatcatttatttattttttgca 752 |||||||||||||||||||||| Sbjct: 40763 gatcatttatttattttttgca 40784
>emb|AL354931.13| Human DNA sequence from clone RP11-535B18 on chromosome 9, complete sequence Length = 126815 Score = 44.1 bits (22), Expect = 0.74 Identities = 22/22 (100%) Strand = Plus / Minus Query: 437 actctgattgattgattgggag 458 |||||||||||||||||||||| Sbjct: 87047 actctgattgattgattgggag 87026
>emb|AL139328.8| Human DNA sequence from clone RP11-84N7 on chromosome 13 Contains part of the DGKH gene for diacylglycerol kinase eta, complete sequence Length = 148430 Score = 44.1 bits (22), Expect = 0.74 Identities = 22/22 (100%) Strand = Plus / Plus Query: 669 gttgcttcctttggtttgtatt 690 |||||||||||||||||||||| Sbjct: 50102 gttgcttcctttggtttgtatt 50123
>emb|AL627262.8| Zebrafish DNA sequence from clone RP71-1L7 in linkage group 15 Contains part of a novel gene similar to human GRID2 (ionotropic glutamate receptor delta 2) and a CpG island, complete sequence Length = 145079 Score = 44.1 bits (22), Expect = 0.74 Identities = 22/22 (100%) Strand = Plus / Plus Query: 733 tcatttatttattttttgcatt 754 |||||||||||||||||||||| Sbjct: 61696 tcatttatttattttttgcatt 61717
>gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, complete sequence Length = 189712 Score = 44.1 bits (22), Expect = 0.74 Identities = 22/22 (100%) Strand = Plus / Minus Query: 729 tggatcatttatttattttttg 750 |||||||||||||||||||||| Sbjct: 166482 tggatcatttatttattttttg 166461
>emb|AL935316.7| Zebrafish DNA sequence from clone CH211-239C9 in linkage group 3, complete sequence Length = 174887 Score = 44.1 bits (22), Expect = 0.74 Identities = 22/22 (100%) Strand = Plus / Plus Query: 732 atcatttatttattttttgcat 753 |||||||||||||||||||||| Sbjct: 17377 atcatttatttattttttgcat 17398
>gb|AC187985.5| Canis Familiaris chromosome X, clone XX-492O14, complete sequence Length = 181510 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 6898 atttatttattttttgcattt 6878
>emb|CR855206.9| Zebrafish DNA sequence from clone DKEY-87O12 in linkage group 6, complete sequence Length = 149781 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 141988 atttatttattttttgcattt 142008
>gb|AC190060.6| Rhesus Macaque BAC CH250-178E24 () complete sequence Length = 214795 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 109316 atttatttattttttgcattt 109296
>emb|CT737136.8| Zebrafish DNA sequence from clone DKEYP-12B1 in linkage group 23, complete sequence Length = 183914 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 104002 atttatttattttttgcattt 104022
>ref|NM_001051892.1| Oryza sativa (japonica cultivar-group) Os01g0940800 (Os01g0940800) mRNA, complete cds Length = 1244 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cctcaacgccgcgctcgccgc 164 ||||||||||||||||||||| Sbjct: 427 cctcaacgccgcgctcgccgc 447
>emb|CR936285.7| Zebrafish DNA sequence from clone CH73-35G18 in linkage group 23, complete sequence Length = 131580 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 125712 atttatttattttttgcattt 125732
>dbj|AB244640.2| Triticum aestivum TaGlb2d mRNA for endo-beta-1,3-glucanase, complete cds Length = 1093 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cctcaacgccgcgctcgccgc 164 ||||||||||||||||||||| Sbjct: 432 cctcaacgccgcgctcgccgc 452
>gb|AC183388.3| Pan troglodytes BAC clone CH251-53D20 from chromosome 16, complete sequence Length = 161327 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 87152 atttatttattttttgcattt 87132
>emb|CT009703.8| Zebrafish DNA sequence from clone DKEYP-32B7 in linkage group 12, complete sequence Length = 129251 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 104313 atttatttattttttgcattt 104293
>ref|XM_614289.2| PREDICTED: Bos taurus similar to glucocorticoid induced transcript 1 (LOC541048), mRNA Length = 4477 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 734 catttatttattttttgcatt 754 ||||||||||||||||||||| Sbjct: 2432 catttatttattttttgcatt 2412
>gb|AC122488.3| Mus musculus BAC clone RP24-383B2 from chromosome 17, complete sequence Length = 206003 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 47701 atttatttattttttgcattt 47721
>gb|AC122276.4| Mus musculus BAC clone RP23-230D23 from 6, complete sequence Length = 169437 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 113807 atttatttattttttgcattt 113787
>gb|AC002288.1|HUAC002288 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-249B10, complete sequence Length = 213633 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 114564 atttatttattttttgcattt 114544
>gb|AC130451.2| Homo sapiens chromosome 16 clone CTA-249B10, complete sequence Length = 215866 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 98131 atttatttattttttgcattt 98151
>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of 11 of the complete sequence Length = 613322 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 12828 atttatttattttttgcattt 12848
>gb|AC165343.3| Mus musculus BAC clone RP23-476C24 from chromosome 17, complete sequence Length = 190724 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 143949 atttatttattttttgcattt 143969
>gb|AC110169.7| Mus musculus chromosome 9, clone RP23-233D3, complete sequence Length = 193041 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 155293 atttatttattttttgcattt 155313
>gb|AC099321.5| Danio rerio clone 35K4, complete sequence Length = 71132 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 tgaactctgattgattgattg 454 ||||||||||||||||||||| Sbjct: 21376 tgaactctgattgattgattg 21396
>gb|AC069439.18| Homo sapiens 3 BAC RP11-12K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104485 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 46297 atttatttattttttgcattt 46277
>emb|CR376775.7| Zebrafish DNA sequence from clone CH211-197C5 in linkage group 23, complete sequence Length = 196846 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 161034 atttatttattttttgcattt 161014
>emb|CR936261.8| Zebrafish DNA sequence from clone DKEY-207A6 in linkage group 5, complete sequence Length = 106678 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 32299 atttatttattttttgcattt 32279
>emb|CR450766.5| Zebrafish DNA sequence from clone DKEY-192C10 in linkage group 8, complete sequence Length = 127307 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 84786 atttatttattttttgcattt 84806
>gb|AC068953.9| Homo sapiens chromosome 8, clone CTD1-2019D9, complete sequence Length = 176997 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 54031 atttatttattttttgcattt 54011
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cctcaacgccgcgctcgccgc 164 ||||||||||||||||||||| Sbjct: 41342660 cctcaacgccgcgctcgccgc 41342680
>emb|CR547125.8| Zebrafish DNA sequence from clone DKEY-27B6 in linkage group 7, complete sequence Length = 181421 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 63337 atttatttattttttgcattt 63317
>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete sequence Length = 113362 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 736 tttatttattttttgcatttc 756 ||||||||||||||||||||| Sbjct: 78912 tttatttattttttgcatttc 78932
>emb|AL442645.8| Human DNA sequence from clone RP11-348N20 on chromosome 9 Contains the 3' end of a novel gene (KIAA1616) and a CpG island, complete sequence Length = 150684 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 22135 atttatttattttttgcattt 22155
>emb|AL445188.5| Human DNA sequence from clone RP11-260E14 on chromosome 13, complete sequence Length = 164061 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 72934 atttatttattttttgcattt 72954
>emb|AL135796.6| Human DNA sequence from clone GS1-164L12 on chromosome 1 Contains part of the gene for hemicentin, complete sequence Length = 157029 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 731 gatcatttatttattttttgc 751 ||||||||||||||||||||| Sbjct: 113536 gatcatttatttattttttgc 113556
>emb|AL049760.26|HSRYR7CC1 Human DNA sequence from clone XX-PRYR7CC1 on chromosome 22, complete sequence Length = 119118 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 17092 atttatttattttttgcattt 17072
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cctcaacgccgcgctcgccgc 164 ||||||||||||||||||||| Sbjct: 34153 cctcaacgccgcgctcgccgc 34173
>dbj|AP007284.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT23F02, TM0183, complete sequence Length = 70173 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 gtgcatttggtctcagctcatcaac 589 |||||||| |||||||||||||||| Sbjct: 49101 gtgcattttgtctcagctcatcaac 49125
>emb|AJ295231.1|OMY295231 Oncorhynchus mykiss iNOS/NOS2 gene for inducible nitric oxide synthase, exons 1-27 Length = 23235 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 14342 atttatttattttttgcattt 14322
>emb|CR377229.8| Zebrafish DNA sequence from clone CH211-273M23 in linkage group 17, complete sequence Length = 142019 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 96825 atttatttattttttgcattt 96805
>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence Length = 250797 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 158409 atttatttattttttgcattt 158429
>emb|CR376766.8| Zebrafish DNA sequence from clone CH211-71K24 in linkage group 13, complete sequence Length = 155126 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 733 tcatttatttattttttgcat 753 ||||||||||||||||||||| Sbjct: 46138 tcatttatttattttttgcat 46158
>emb|AL954227.3|RP43002I19 Pan troglodytes chromosome 22 BAC RP43-002I19, complete sequence Length = 192219 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 178910 atttatttattttttgcattt 178930
>emb|CR627496.8| Zebrafish DNA sequence from clone DKEY-223G10 in linkage group 17, complete sequence Length = 154593 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 734 catttatttattttttgcatt 754 ||||||||||||||||||||| Sbjct: 110336 catttatttattttttgcatt 110316
>emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 in linkage group 4, complete sequence Length = 200352 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 29407 atttatttattttttgcattt 29387
>gb|AC068252.9| Mus musculus chromosome 5, clone RP23-312J7, complete sequence Length = 190438 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 tcctgatgcaatgcttaacat 551 ||||||||||||||||||||| Sbjct: 142957 tcctgatgcaatgcttaacat 142977
>emb|BX897668.12| Zebrafish DNA sequence from clone CH211-13H4 in linkage group 4, complete sequence Length = 42562 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 30174 atttatttattttttgcattt 30154
>emb|BX571773.12| Zebrafish DNA sequence from clone DKEY-174K1 in linkage group 6, complete sequence Length = 135439 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 127425 atttatttattttttgcattt 127445
>gb|AC013401.10| Homo sapiens BAC clone RP11-98N11 from 2, complete sequence Length = 168595 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 728 gtggatcatttatttattttt 748 ||||||||||||||||||||| Sbjct: 33067 gtggatcatttatttattttt 33087
>gb|AC009475.5| Homo sapiens BAC clone RP11-285F23 from 2, complete sequence Length = 190349 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 733 tcatttatttattttttgcat 753 ||||||||||||||||||||| Sbjct: 44417 tcatttatttattttttgcat 44397
>gb|AC087651.19| Homo sapiens chromosome 17, clone RP11-309N17, complete sequence Length = 197148 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 caccaacttcgccgccaactt 308 ||||||||||||||||||||| Sbjct: 8390 caccaacttcgccgccaactt 8370
>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence Length = 174914 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 caccaacttcgccgccaactt 308 ||||||||||||||||||||| Sbjct: 71742 caccaacttcgccgccaactt 71762
>emb|BX571880.6| Zebrafish DNA sequence from clone DKEY-29L4 in linkage group 15, complete sequence Length = 194220 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 729 tggatcatttatttatttttt 749 ||||||||||||||||||||| Sbjct: 154844 tggatcatttatttatttttt 154864
>dbj|AK105972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F03, full insert sequence Length = 1240 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cctcaacgccgcgctcgccgc 164 ||||||||||||||||||||| Sbjct: 423 cctcaacgccgcgctcgccgc 443
>dbj|AK068247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H16, full insert sequence Length = 1245 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cctcaacgccgcgctcgccgc 164 ||||||||||||||||||||| Sbjct: 428 cctcaacgccgcgctcgccgc 448
>emb|BX649446.6| Zebrafish DNA sequence from clone DKEY-247M22 in linkage group 4, complete sequence Length = 155024 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 30528 atttatttattttttgcattt 30508
>emb|AL935305.13| Zebrafish DNA sequence from clone CH211-226I4 in linkage group 23, complete sequence Length = 190222 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 99560 atttatttattttttgcattt 99540
>emb|BX276091.6| Zebrafish DNA sequence from clone CH211-267P9 in linkage group 5, complete sequence Length = 134612 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 22513 atttatttattttttgcattt 22493
>emb|BX247902.6| Zebrafish DNA sequence from clone CH211-231D21 in linkage group 8, complete sequence Length = 160910 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 51533 atttatttattttttgcattt 51513
>emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, complete sequence Length = 166286 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 57835 atttatttattttttgcattt 57855
>emb|BX004792.8| Zebrafish DNA sequence from clone DKEY-1J19, complete sequence Length = 206371 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 106876 atttatttattttttgcattt 106856
>dbj|AP003468.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205B2, complete sequence Length = 177515 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 149079 atttatttattttttgcattt 149099
>emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in linkage group 17, complete sequence Length = 156881 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 7982 atttatttattttttgcattt 7962
>emb|BX294163.7| Zebrafish DNA sequence from clone DKEY-46D17 in linkage group 20, complete sequence Length = 115103 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 33742 atttatttattttttgcattt 33762
>emb|AL935206.8| Zebrafish DNA sequence from clone CH211-254A7, complete sequence Length = 169723 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 66221 atttatttattttttgcattt 66241
>emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 in linkage group 17, complete sequence Length = 154493 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 99489 atttatttattttttgcattt 99509
>emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, complete sequence Length = 198052 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 733 tcatttatttattttttgcat 753 ||||||||||||||||||||| Sbjct: 129571 tcatttatttattttttgcat 129551
>emb|AL845363.5| Zebrafish DNA sequence from clone CH211-14G12 in linkage group 20, complete sequence Length = 162223 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 atttatttattttttgcattt 755 ||||||||||||||||||||| Sbjct: 92900 atttatttattttttgcattt 92880 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 142,252,878 Number of extensions: 9711277 Number of successful extensions: 475284 Number of sequences better than 10.0: 77 Number of HSP's gapped: 475283 Number of HSP's successfully gapped: 86 Length of query: 777 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 755 Effective length of database: 18,508,616,841 Effective search space: 13974005714955 Effective search space used: 13974005714955 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)