ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf67h08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121683:Os08g0535600 | 123 | 7e-29 | 2 | Os11g0131700:Os11g0131700 | 86 | 1e-17 | 3 | AK120379:Os12g0128600 | 86 | 2e-17 | 4 | AK108470:Os02g0682600 | 43 | 1e-04 | 5 | AK063093:Os04g0581300 | 41 | 4e-04 | 6 | AF150080: | 41 | 6e-04 | 7 | AK059163:Os03g0825400 | 37 | 0.008 | 8 | AK108213:Os07g0243100 | 35 | 0.041 | 9 | AK109917:Os01g0588000 | 30 | 0.78 | 10 | AK071112:Os01g0893400 | 30 | 1.0 | 11 | AK061917:Os01g0893400 | 30 | 1.0 | 12 | AK106893:Os08g0199100 | 30 | 1.3 | 13 | AK111190: | 28 | 2.9 | 14 | Os01g0375400:Os01g0375400 | 28 | 5.0 | 15 | AK121501:Os01g0375200 | 28 | 5.0 | 16 | AK073323:Os01g0375200 | 28 | 5.0 | 17 | AK121887:Os08g0109100 | 27 | 6.5 | 18 | AK120484:Os08g0109100 | 27 | 6.5 | 19 | AK059502:Os06g0729400 | 27 | 8.5 | 20 | U04296:Os11g0154800 | 27 | 8.6 |
|---|
>AK121683:Os08g0535600 | Length = 73 Score = 123 bits (309), Expect = 7e-29 Identities = 56/73 (76%), Positives = 67/73 (91%) Frame = +3 Query: 87 MDTSPELAQFLEQEKQRMMMSEMVTKLTNVCWDKCITGTPGSKFSSGETTCLTNCAQRYL 266 M+ S E+ +F+EQE+Q+ M+SEMV KLT+VCWDKCIT TPGSKFSSGETTCLTNCAQR+L Sbjct: 1 MENSAEMQRFIEQEQQKAMVSEMVGKLTSVCWDKCITSTPGSKFSSGETTCLTNCAQRFL 60 Query: 267 DMSMIIAKRFQMQ 305 DMS+IIAKRF+MQ Sbjct: 61 DMSVIIAKRFEMQ 73
>Os11g0131700:Os11g0131700 | Length = 78 Score = 86.3 bits (212), Expect = 1e-17 Identities = 36/72 (50%), Positives = 55/72 (76%) Frame = +3 Query: 78 EAAMDTSPELAQFLEQEKQRMMMSEMVTKLTNVCWDKCITGTPGSKFSSGETTCLTNCAQ 257 +A+ ++P L LE+EK++ M +E V KLT+VCWDKCITG+ GS FS+ E +CL+NCA+ Sbjct: 2 DASALSNPRLQAMLEEEKRKAMANEFVAKLTDVCWDKCITGSIGSSFSNSEASCLSNCAK 61 Query: 258 RYLDMSMIIAKR 293 R+ ++ M+I +R Sbjct: 62 RFFELKMLIVQR 73
>AK120379:Os12g0128600 | Length = 78 Score = 85.5 bits (210), Expect = 2e-17 Identities = 36/72 (50%), Positives = 55/72 (76%) Frame = +3 Query: 78 EAAMDTSPELAQFLEQEKQRMMMSEMVTKLTNVCWDKCITGTPGSKFSSGETTCLTNCAQ 257 +A+ ++P L LE+EK++ M +E V KLT+VCWDKCITG+ GS FS+ E +CL+NCA+ Sbjct: 2 DASALSNPRLQAMLEEEKRKAMANEFVAKLTDVCWDKCITGSIGSSFSNSEASCLSNCAK 61 Query: 258 RYLDMSMIIAKR 293 R+L++ M+ +R Sbjct: 62 RFLELKMLTMQR 73
>AK108470:Os02g0682600 | Length = 84 Score = 43.1 bits (100), Expect = 1e-04 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = +3 Query: 60 GRASRREAAMDT-SPELAQFLEQEKQRMMMSEMVTKLTNVCWDKCITGTPGSKFSSGETT 236 G EA MD +LAQ QE + + N C+ KC+T PGS S E++ Sbjct: 9 GSPPNTEALMDQIKAQLAQAYAQE--------FLETVGNKCFAKCVT-KPGSSLSGSESS 59 Query: 237 CLTNCAQRYLDMSMIIAK 290 C++ C RY++ + I+++ Sbjct: 60 CISRCVDRYIEATGIVSR 77
>AK063093:Os04g0581300 | Length = 86 Score = 41.2 bits (95), Expect = 4e-04 Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 3/61 (4%) Frame = +3 Query: 117 LEQEKQRMMMS---EMVTKLTNVCWDKCITGTPGSKFSSGETTCLTNCAQRYLDMSMIIA 287 +EQ K ++ + E + + N C+ KC+T PG+ S E++C++ C RY++ + I++ Sbjct: 20 MEQIKAQLAQAYAQEFLETVGNKCFAKCVT-KPGTSLSGSESSCISRCVDRYIEATGIVS 78 Query: 288 K 290 + Sbjct: 79 R 79
>AF150080: | Length = 84 Score = 40.8 bits (94), Expect = 6e-04 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +3 Query: 60 GRASRREAAMDT-SPELAQFLEQEKQRMMMSEMVTKLTNVCWDKCITGTPGSKFSSGETT 236 G EA MD +LAQ QE + + N C+ C+T PGS S E++ Sbjct: 9 GSPPNTEALMDQIKAQLAQAYAQE--------FLETVGNKCFAXCVT-KPGSSLSGSESS 59 Query: 237 CLTNCAQRYLDMSMIIAK 290 C++ C RY++ + I+++ Sbjct: 60 CISRCVDRYIEATGIVSR 77
>AK059163:Os03g0825400 | Length = 83 Score = 37.0 bits (84), Expect = 0.008 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%) Frame = +3 Query: 87 MDTSPELAQFLEQEKQRMMMSEM------VTKLTNVCWDKCITGT-PGSKFSSGETTCLT 245 M PE Q +++ MM EM +LT C+DKCI ++ + GE +C+ Sbjct: 1 MAAKPEPTQLEKEQMFGMMEKEMEYRVDLFNRLTQTCFDKCIEKRYKEAELNMGENSCID 60 Query: 246 NCAQRYLDMSMIIAK 290 C +Y ++ ++ + Sbjct: 61 RCVSKYWQVTNMVGQ 75
>AK108213:Os07g0243100 | Length = 90 Score = 34.7 bits (78), Expect = 0.041 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +3 Query: 126 EKQRMMMSEMVTKLTNVCWDKCITGT-PGSKFSSGETTCLTNCAQRYLDMSMIIAK 290 EK+ ++ +LT C+ KCI ++ + GE +C+ CA +Y ++ ++ + Sbjct: 27 EKEMEYRVDLFNRLTQTCFSKCIEKRHKEAELNMGENSCIDRCASKYWQVTNLVGQ 82
>AK109917:Os01g0588000 | Length = 269 Score = 30.4 bits (67), Expect = 0.78 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Frame = +2 Query: 5 SGSSPPCPSKNQKGFRVLRTSESARGSHGHLPRAS------PVPGAREAKDDDE 148 +G PP P K RT SAR P+A+ P P ARE D++E Sbjct: 123 AGKPPPPPPKTDSDQSERRTQLSAREKKEEPPKATAPAAAPPQPAARERHDEEE 176
>AK071112:Os01g0893400 | Length = 413 Score = 30.0 bits (66), Expect = 1.0 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = +3 Query: 102 ELAQFLEQEKQRMMMSEMVTKLTNVCWDKCIT-GTPGSKFSSGETTC-LTNCAQRYLDMS 275 E A+ LE+ K + + E + L ++C D C T G S + C C L + Sbjct: 267 ERARRLEENKVYLQLHEAMEALIHICRDGCRTIGPRDQTLKSSQAVCRFPACKGIELLLR 326 Query: 276 MIIAKRFQMQ*GVSNCSRL 332 A + ++ G +NC R+ Sbjct: 327 HFSACKMRVPGGCANCKRI 345
>AK061917:Os01g0893400 | Length = 413 Score = 30.0 bits (66), Expect = 1.0 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = +3 Query: 102 ELAQFLEQEKQRMMMSEMVTKLTNVCWDKCIT-GTPGSKFSSGETTC-LTNCAQRYLDMS 275 E A+ LE+ K + + E + L ++C D C T G S + C C L + Sbjct: 267 ERARRLEENKVYLQLHEAMEALIHICRDGCRTIGPRDQTLKSSQAVCRFPACKGIELLLR 326 Query: 276 MIIAKRFQMQ*GVSNCSRL 332 A + ++ G +NC R+ Sbjct: 327 HFSACKMRVPGGCANCKRI 345
>AK106893:Os08g0199100 | Length = 284 Score = 29.6 bits (65), Expect = 1.3 Identities = 18/45 (40%), Positives = 20/45 (44%) Frame = +2 Query: 2 QSGSSPPCPSKNQKGFRVLRTSESARGSHGHLPRASPVPGAREAK 136 Q+ S CP + G R L S RGS G P VP R AK Sbjct: 68 QATRSTECPGETPPGGRCLVAGRSRRGSQG--PARRSVPPTRSAK 110
>AK111190: | Length = 86 Score = 28.5 bits (62), Expect = 2.9 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -2 Query: 333 ATGCSWRRPTASETSSQLSYSCPDTSERN 247 AT CS+RR + +T ++ S +CP T R+ Sbjct: 51 ATICSFRRRRSLKTKARCSRTCPSTGSRS 79
>Os01g0375400:Os01g0375400 | Length = 220 Score = 27.7 bits (60), Expect = 5.0 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%) Frame = +2 Query: 239 PDQLRSEVSGHEYDN---CEEVSDAVGRLQ 319 P++ + VS H Y++ CEE++D V R+Q Sbjct: 53 PEKCKLIVSAHNYESTPSCEELADLVARIQ 82
>AK121501:Os01g0375200 | Length = 572 Score = 27.7 bits (60), Expect = 5.0 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%) Frame = +2 Query: 239 PDQLRSEVSGHEYDN---CEEVSDAVGRLQ 319 P++ + VS H Y++ CEE++D V R+Q Sbjct: 175 PEKCKLIVSSHNYESTPSCEELADLVARIQ 204
>AK073323:Os01g0375200 | Length = 509 Score = 27.7 bits (60), Expect = 5.0 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%) Frame = +2 Query: 239 PDQLRSEVSGHEYDN---CEEVSDAVGRLQ 319 P++ + VS H Y++ CEE++D V R+Q Sbjct: 112 PEKCKLIVSSHNYESTPSCEELADLVARIQ 141
>AK121887:Os08g0109100 | Length = 889 Score = 27.3 bits (59), Expect = 6.5 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 Query: 405 YLILCRKRLVSSCICGEPL 461 YLIL KR CICG P+ Sbjct: 102 YLILVTKRCQIGCICGHPI 120
>AK120484:Os08g0109100 | Length = 889 Score = 27.3 bits (59), Expect = 6.5 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 Query: 405 YLILCRKRLVSSCICGEPL 461 YLIL KR CICG P+ Sbjct: 102 YLILVTKRCQIGCICGHPI 120
>AK059502:Os06g0729400 | Length = 133 Score = 26.9 bits (58), Expect = 8.5 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 20/69 (28%) Frame = +3 Query: 66 ASRREAAMDTSPELAQFLEQEKQRMMMS--------------------EMVTKLTNVCWD 185 AS A+ + P+L Q ++ ++ R ++ EM K+ NVC + Sbjct: 40 ASAAAASSSSHPQLVQQMQVKRARSLLQAPKIDCQGTCSGRCANNWKKEMCNKMCNVCCN 99 Query: 186 KCITGTPGS 212 +C PGS Sbjct: 100 RCNCVPPGS 108
>U04296:Os11g0154800 | Length = 124 Score = 26.9 bits (58), Expect = 8.6 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 Query: 11 SSPPCPSKNQKGFRVLRTSESARGSHGHLPR 103 SSPPC S + G ++ + +A + G+ PR Sbjct: 17 SSPPCSSSSSAGHPAMQPAAAATAAPGYGPR 47 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,670,216 Number of extensions: 280055 Number of successful extensions: 927 Number of sequences better than 10.0: 20 Number of HSP's gapped: 925 Number of HSP's successfully gapped: 20 Length of query: 180 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 86 Effective length of database: 11,636,001 Effective search space: 1000696086 Effective search space used: 1000696086 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
