ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf67h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001068891.1| Oryza sativa (japonica cultivar-group) Os08g... 125 2e-25
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
3dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
4dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
5dbj|AK121683.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
6gb|AY111264.1| Zea mays CL5926_1 mRNA sequence 100 1e-17
7gb|AF150084.1|AF150084 Malus domestica small zinc finger-like pr... 62 2e-06
8ref|NM_124459.2| Arabidopsis thaliana TIM8; protein translocase ... 54 5e-04
9gb|AY087301.1| Arabidopsis thaliana clone 33833 mRNA, complete s... 54 5e-04
10gb|BT004405.1| Arabidopsis thaliana clone U20415 putative small ... 54 5e-04
11gb|BT002881.1| Arabidopsis thaliana clone RAFL14-80-H13 (R20415)... 54 5e-04
12dbj|AB025617.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 5e-04
13emb|BX833846.1|CNS0A0HF Arabidopsis thaliana Full-length cDNA Co... 54 5e-04
14gb|AF150083.1|AF150083 Arabidopsis thaliana small zinc finger-li... 54 5e-04
15dbj|AK224772.1| Solanum lycopersicum cDNA, clone: FC14BG03, HTC ... 52 0.002
16gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete seq... 52 0.002
17emb|CT837484.1| Oryza sativa (indica cultivar-group) cDNA clone:... 46 0.13
18dbj|AK243327.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 46 0.13
19ref|NM_001072593.1| Oryza sativa (japonica cultivar-group) Os12g... 46 0.13
20ref|NM_001072190.1| Oryza sativa (japonica cultivar-group) Os11g... 46 0.13
21gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
24dbj|AK120379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
25dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone... 46 0.13
26emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003... 46 0.13
27gb|BC078465.1| Xenopus laevis MGC85218 protein, mRNA (cDNA clone... 44 0.51
28ref|NM_001017099.2| Xenopus tropicalis translocase of inner mito... 44 0.51
29gb|AC104856.19| Mus musculus chromosome 5, clone RP23-53G23, com... 42 2.0
30gb|AC127296.4| Mus musculus BAC clone RP23-395A17 from chromosom... 42 2.0
31gb|AC143329.3| Mus musculus BAC clone RP23-347I6 from chromosome... 42 2.0
32dbj|AK164820.1| Mus musculus 16 days neonate heart cDNA, RIKEN f... 42 2.0
33ref|XM_746712.1| Aspergillus fumigatus Af293 phospholipid-transp... 42 2.0
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
35dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
36gb|AC133477.2| Homo sapiens 3 BAC RP11-364M20 (Roswell Park Canc... 42 2.0
37gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosom... 42 2.0
38gb|AF150085.1|AF150085 Brassica rapa small zinc finger-like prot... 42 2.0
39ref|XM_001030439.1| Tetrahymena thermophila SB210 EGF-like domai... 40 7.9
40gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete s... 40 7.9
41gb|AC183773.2| Pan troglodytes BAC clone CH251-2N7 from chromoso... 40 7.9
42gb|AC183385.3| Pan troglodytes BAC clone CH251-277F20 from chrom... 40 7.9
43gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome... 40 7.9
44ref|NM_080081.2| Drosophila melanogaster net CG11450-RA (net), mRNA 40 7.9
45emb|CR626881.4| Zebrafish DNA sequence from clone CH211-77G19 in... 40 7.9
46emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chr... 40 7.9
47emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chr... 40 7.9
48gb|BT022752.1| Drosophila melanogaster IP14710 full insert cDNA 40 7.9
49gb|BT022740.1| Drosophila melanogaster IP14510 full insert cDNA 40 7.9
50gb|AC008318.7|AC008318 Drosophila melanogaster, chromosome 2L, r... 40 7.9
51gb|AF303350.1|AF303350 Drosophila melanogaster DNA-binding trans... 40 7.9
52gb|AC073289.12| Homo sapiens 3 BAC RP11-478O19 (Roswell Park Can... 40 7.9
53gb|DQ068020.1| Catathelasma imperiale RNA polymerase II largest ... 40 7.9
54emb|AL929338.9| Zebrafish DNA sequence from clone CH211-139G18 i... 40 7.9
55ref|XM_723354.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 7.9
56gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 7.9
57ref|XM_734594.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.9
58emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on ch... 40 7.9 
>ref|NM_001068891.1| Oryza sativa (japonica cultivar-group) Os08g0535600 (Os08g0535600)
           mRNA, complete cds
          Length = 456
 Score =  125 bits (63), Expect = 2e-25
 Identities = 117/135 (86%)
 Strand = Plus / Plus

                                                                       
Query: 174 gtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaaact 233
           |||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| 
Sbjct: 170 gtgtgctgggacaagtgcatcaccagcactccaggaagcaagttcagctccggggaaacg 229

                                                                       
Query: 234 acctgcctgaccaattgcgctcagaggtatctggacatgagtatgataattgcgaagagg 293
           || ||||||||||| |||||||||||||  || ||||||||  |||| || || ||  ||
Sbjct: 230 acttgcctgaccaactgcgctcagaggttccttgacatgagcgtgatcatcgccaaacgg 289

                          
Query: 294 tttcagatgcagtag 308
           ||| |||||||||||
Sbjct: 290 tttgagatgcagtag 304
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  125 bits (63), Expect = 2e-25
 Identities = 117/135 (86%)
 Strand = Plus / Minus

                                                                            
Query: 174      gtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaaact 233
                |||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| 
Sbjct: 26742828 gtgtgctgggacaagtgcatcaccagcactccaggaagcaagttcagctccggggaaacg 26742769

                                                                            
Query: 234      acctgcctgaccaattgcgctcagaggtatctggacatgagtatgataattgcgaagagg 293
                || ||||||||||| |||||||||||||  || ||||||||  |||| || || ||  ||
Sbjct: 26742768 acttgcctgaccaactgcgctcagaggttccttgacatgagcgtgatcatcgccaaacgg 26742709

                               
Query: 294      tttcagatgcagtag 308
                ||| |||||||||||
Sbjct: 26742708 tttgagatgcagtag 26742694
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>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0033D24
          Length = 186132

 Score =  125 bits (63), Expect = 2e-25
 Identities = 117/135 (86%)
 Strand = Plus / Minus

                                                                         
Query: 174   gtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaaact 233
             |||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| 
Sbjct: 86170 gtgtgctgggacaagtgcatcaccagcactccaggaagcaagttcagctccggggaaacg 86111

                                                                         
Query: 234   acctgcctgaccaattgcgctcagaggtatctggacatgagtatgataattgcgaagagg 293
             || ||||||||||| |||||||||||||  || ||||||||  |||| || || ||  ||
Sbjct: 86110 acttgcctgaccaactgcgctcagaggttccttgacatgagcgtgatcatcgccaaacgg 86051

                            
Query: 294   tttcagatgcagtag 308
             ||| |||||||||||
Sbjct: 86050 tttgagatgcagtag 86036
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>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0665C04
          Length = 177054

 Score =  125 bits (63), Expect = 2e-25
 Identities = 117/135 (86%)
 Strand = Plus / Minus

                                                                        
Query: 174  gtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaaact 233
            |||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| 
Sbjct: 5618 gtgtgctgggacaagtgcatcaccagcactccaggaagcaagttcagctccggggaaacg 5559

                                                                        
Query: 234  acctgcctgaccaattgcgctcagaggtatctggacatgagtatgataattgcgaagagg 293
            || ||||||||||| |||||||||||||  || ||||||||  |||| || || ||  ||
Sbjct: 5558 acttgcctgaccaactgcgctcagaggttccttgacatgagcgtgatcatcgccaaacgg 5499

                           
Query: 294  tttcagatgcagtag 308
            ||| |||||||||||
Sbjct: 5498 tttgagatgcagtag 5484
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>dbj|AK121683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070B21, full
           insert sequence
          Length = 458

 Score =  125 bits (63), Expect = 2e-25
 Identities = 117/135 (86%)
 Strand = Plus / Plus

                                                                       
Query: 174 gtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaaact 233
           |||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| 
Sbjct: 171 gtgtgctgggacaagtgcatcaccagcactccaggaagcaagttcagctccggggaaacg 230

                                                                       
Query: 234 acctgcctgaccaattgcgctcagaggtatctggacatgagtatgataattgcgaagagg 293
           || ||||||||||| |||||||||||||  || ||||||||  |||| || || ||  ||
Sbjct: 231 acttgcctgaccaactgcgctcagaggttccttgacatgagcgtgatcatcgccaaacgg 290

                          
Query: 294 tttcagatgcagtag 308
           ||| |||||||||||
Sbjct: 291 tttgagatgcagtag 305
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>gb|AY111264.1| Zea mays CL5926_1 mRNA sequence
          Length = 587

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 176 gtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaaactac 235
           |||||||||||||||||||||| || | || || ||||||||||||||||| ||| | ||
Sbjct: 213 gtgctgggacaaatgcatcaccagcgctcccgggagcaagttcagctccggggaatcaac 272

                                     
Query: 236 ctgcctgaccaattgcgctcagaggt 261
           |||||||||||| |||||||||||||
Sbjct: 273 ctgcctgaccaactgcgctcagaggt 298
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>gb|AF150084.1|AF150084 Malus domestica small zinc finger-like protein (TIM8) mRNA, partial
           cds
          Length = 279

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 162 aagctgacgaatgtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcag 220
           ||||| ||||||||||| |||||||| |||||||| || ||||| || |||||||||||
Sbjct: 154 aagcttacgaatgtgtgttgggacaagtgcatcactggtacccccgggagcaagttcag 212
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>ref|NM_124459.2| Arabidopsis thaliana TIM8; protein translocase (TIM8) mRNA,
           complete cds
          Length = 560

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 173 tgtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctc 223
           ||||||||||||||||||||||||  || | || ||||| |||||||||||
Sbjct: 184 tgtgtgctgggacaaatgcatcacaagcgcaccgggaagtaagttcagctc 234
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>gb|AY087301.1| Arabidopsis thaliana clone 33833 mRNA, complete sequence
          Length = 489

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 173 tgtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctc 223
           ||||||||||||||||||||||||  || | || ||||| |||||||||||
Sbjct: 190 tgtgtgctgggacaaatgcatcacaagcgcaccgggaagtaagttcagctc 240
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>gb|BT004405.1| Arabidopsis thaliana clone U20415 putative small zinc finger
           protein (At5g50810) mRNA, complete cds
          Length = 265

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 173 tgtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctc 223
           ||||||||||||||||||||||||  || | || ||||| |||||||||||
Sbjct: 99  tgtgtgctgggacaaatgcatcacaagcgcaccgggaagtaagttcagctc 149
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>gb|BT002881.1| Arabidopsis thaliana clone RAFL14-80-H13 (R20415) putative small
           zinc finger protein (At5g50810) mRNA, complete cds
          Length = 576

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 173 tgtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctc 223
           ||||||||||||||||||||||||  || | || ||||| |||||||||||
Sbjct: 180 tgtgtgctgggacaaatgcatcacaagcgcaccgggaagtaagttcagctc 230
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>dbj|AB025617.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K7B16
          Length = 26721

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 173   tgtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctc 223
             ||||||||||||||||||||||||  || | || ||||| |||||||||||
Sbjct: 14070 tgtgtgctgggacaaatgcatcacaagcgcaccgggaagtaagttcagctc 14020
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>emb|BX833846.1|CNS0A0HF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL7ZC07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 489

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 173 tgtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctc 223
           ||||||||||||||||||||||||  || | || ||||| |||||||||||
Sbjct: 152 tgtgtgctgggacaaatgcatcacaagcgcaccgggaagtaagttcagctc 202
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>gb|AF150083.1|AF150083 Arabidopsis thaliana small zinc finger-like protein (TIM8) mRNA,
           complete cds
          Length = 518

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 173 tgtgtgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctc 223
           ||||||||||||||||||||||||  || | || ||||| |||||||||||
Sbjct: 170 tgtgtgctgggacaaatgcatcacaagcgcaccgggaagtaagttcagctc 220
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>dbj|AK224772.1| Solanum lycopersicum cDNA, clone: FC14BG03, HTC in fruit
          Length = 341

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 177 tgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaa 230
           ||||||||||||||| | || || || || |||||||||||||||||| |||||
Sbjct: 116 tgctgggacaaatgcgtgactggtactcccggaagcaagttcagctccagtgaa 169
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>gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete sequence
          Length = 129204

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 177   tgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaaacta 234
             |||||||||||||||||||| ||||| || || |  |||||||| |||||||| ||||
Sbjct: 54390 tgctgggacaaatgcatcacaggcacgccggggaataagttcagttccggtgagacta 54333
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>emb|CT837484.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA014J18, full
           insert sequence
          Length = 552

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 162 aagctgacgaatgtgtgctgggacaaatgcatcac 196
           ||||||||  |||| ||||||||||||||||||||
Sbjct: 168 aagctgactgatgtttgctgggacaaatgcatcac 202
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>dbj|AK243327.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100058A16,
           full insert sequence
          Length = 551

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 162 aagctgacgaatgtgtgctgggacaaatgcatcac 196
           ||||||||  |||| ||||||||||||||||||||
Sbjct: 166 aagctgactgatgtttgctgggacaaatgcatcac 200
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>ref|NM_001072593.1| Oryza sativa (japonica cultivar-group) Os12g0128600 (Os12g0128600)
           mRNA, complete cds
          Length = 491

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 162 aagctgacgaatgtgtgctgggacaaatgcatcac 196
           ||||||||  |||| ||||||||||||||||||||
Sbjct: 163 aagctgactgatgtttgctgggacaaatgcatcac 197
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>ref|NM_001072190.1| Oryza sativa (japonica cultivar-group) Os11g0131700 (Os11g0131700)
           mRNA, complete cds
          Length = 237

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 162 aagctgacgaatgtgtgctgggacaaatgcatcac 196
           ||||||||  |||| ||||||||||||||||||||
Sbjct: 88  aagctgactgatgtttgctgggacaaatgcatcac 122
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>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035B18, complete sequence
          Length = 123425

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 162   aagctgacgaatgtgtgctgggacaaatgcatcac 196
             ||||||||  |||| ||||||||||||||||||||
Sbjct: 63190 aagctgactgatgtttgctgggacaaatgcatcac 63156
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 162     aagctgacgaatgtgtgctgggacaaatgcatcac 196
               ||||||||  |||| ||||||||||||||||||||
Sbjct: 1354389 aagctgactgatgtttgctgggacaaatgcatcac 1354355
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 162     aagctgacgaatgtgtgctgggacaaatgcatcac 196
               ||||||||  |||| ||||||||||||||||||||
Sbjct: 1444395 aagctgactgatgtttgctgggacaaatgcatcac 1444361
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>dbj|AK120379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072B16, full
           insert sequence
          Length = 492

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 162 aagctgacgaatgtgtgctgggacaaatgcatcac 196
           ||||||||  |||| ||||||||||||||||||||
Sbjct: 164 aagctgactgatgtttgctgggacaaatgcatcac 198
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>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266,
             complete sequence
          Length = 113459

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 177   tgctgggacaaatgcatcaccggcaccccaggaagcaagttcagctccggtgaaactac 235
             |||||||||||||||||||| ||||| || || || ||| |||| || |||||| ||||
Sbjct: 15566 tgctgggacaaatgcatcactggcacacctgggagtaagctcagttctggtgaagctac 15508
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>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157453

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 162   aagctgacgaatgtgtgctgggacaaatgcatcac 196
             ||||||||  |||| ||||||||||||||||||||
Sbjct: 74780 aagctgactgatgtttgctgggacaaatgcatcac 74814
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>gb|BC078465.1| Xenopus laevis MGC85218 protein, mRNA (cDNA clone MGC:85218
           IMAGE:6871849), complete cds
          Length = 738

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 172 atgtgtgctgggacaaatgcat 193
           ||||||||||||||||||||||
Sbjct: 161 atgtgtgctgggacaaatgcat 182
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>ref|NM_001017099.2| Xenopus tropicalis translocase of inner mitochondrial membrane 8
           homolog B (yeast) (timm8b), mRNA
 emb|CR761299.2| Xenopus tropicalis finished cDNA, clone TEgg013c16
          Length = 502

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 172 atgtgtgctgggacaaatgcat 193
           ||||||||||||||||||||||
Sbjct: 138 atgtgtgctgggacaaatgcat 159
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>gb|AC104856.19| Mus musculus chromosome 5, clone RP23-53G23, complete sequence
          Length = 169800

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 362    ttccttttcacatgccaacaa 382
              |||||||||||||||||||||
Sbjct: 104360 ttccttttcacatgccaacaa 104340
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>gb|AC127296.4| Mus musculus BAC clone RP23-395A17 from chromosome 7, complete sequence
          Length = 205162

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 362    ttccttttcacatgccaacaa 382
              |||||||||||||||||||||
Sbjct: 159610 ttccttttcacatgccaacaa 159630
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>gb|AC143329.3| Mus musculus BAC clone RP23-347I6 from chromosome 7, complete sequence
          Length = 201979

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   ttccttttcacatgccaacaa 382
             |||||||||||||||||||||
Sbjct: 87419 ttccttttcacatgccaacaa 87399
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>dbj|AK164820.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
           library, clone:D830045I08 product:phosphodiesterase 4D,
           cAMP specific, full insert sequence
          Length = 1533

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 447 tgtggtgaacctttggttagctttc 471
           |||||| ||||||||||||||||||
Sbjct: 705 tgtggttaacctttggttagctttc 729
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>ref|XM_746712.1| Aspergillus fumigatus Af293 phospholipid-transporting ATPase DRS2
            (Afu4g10210) partial mRNA
          Length = 4599

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 13   ttctcctccttgtccaagcaa 33
            |||||||||||||||||||||
Sbjct: 1166 ttctcctccttgtccaagcaa 1146
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 127      agaagcaaaggatgatgatga 147
                |||||||||||||||||||||
Sbjct: 12040105 agaagcaaaggatgatgatga 12040125
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>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0441A12
          Length = 185437

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    agaagcaaaggatgatgatga 147
              |||||||||||||||||||||
Sbjct: 144585 agaagcaaaggatgatgatga 144605
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>gb|AC133477.2| Homo sapiens 3 BAC RP11-364M20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 101061

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 387   gagttttaacagtgaaaatat 407
             |||||||||||||||||||||
Sbjct: 55930 gagttttaacagtgaaaatat 55910
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>gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosome 13, complete
             sequence
          Length = 205673

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 447   tgtggtgaacctttggttagctttc 471
             |||||| ||||||||||||||||||
Sbjct: 74335 tgtggttaacctttggttagctttc 74311
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>gb|AF150085.1|AF150085 Brassica rapa small zinc finger-like protein (TIM8) mRNA, partial
           cds
          Length = 235

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 204 ccaggaagcaagttcagctcc 224
           |||||||||||||||||||||
Sbjct: 189 ccaggaagcaagttcagctcc 209
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>ref|XM_001030439.1| Tetrahymena thermophila SB210 EGF-like domain containing protein
            (TTHERM_01082860) mRNA, complete cds
          Length = 3990

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 261  tatctggacatgagtatgataatt 284
            |||||||| |||||||||||||||
Sbjct: 3650 tatctggatatgagtatgataatt 3673
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>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence
          Length = 23011544

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   tcaaaaactttccaaactct 357
             ||||||||||||||||||||
Sbjct: 83448 tcaaaaactttccaaactct 83429
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>gb|AC183773.2| Pan troglodytes BAC clone CH251-2N7 from chromosome 7, complete
            sequence
          Length = 168126

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  agcaaaggatgatgatgagt 149
            ||||||||||||||||||||
Sbjct: 3935 agcaaaggatgatgatgagt 3916
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>gb|AC183385.3| Pan troglodytes BAC clone CH251-277F20 from chromosome 7, complete
              sequence
          Length = 148939

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    agcaaaggatgatgatgagt 149
              ||||||||||||||||||||
Sbjct: 131293 agcaaaggatgatgatgagt 131274
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>gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome 8, complete sequence
          Length = 205525

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   tggttagtagttgtatctgt 449
             ||||||||||||||||||||
Sbjct: 91707 tggttagtagttgtatctgt 91688
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>ref|NM_080081.2| Drosophila melanogaster net CG11450-RA (net), mRNA
          Length = 2185

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  tcaaaaactttccaaactct 357
            ||||||||||||||||||||
Sbjct: 1193 tcaaaaactttccaaactct 1212
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>emb|CR626881.4| Zebrafish DNA sequence from clone CH211-77G19 in linkage group 17,
            complete sequence
          Length = 25803

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  tgtgtgctgggacaaatgca 192
            ||||||||||||||||||||
Sbjct: 8768 tgtgtgctgggacaaatgca 8787
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>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the
             3' end of the PEX14 gene for peroxisomal biogenesis factor
             14, the 3' end of the gene for a novel protein (FLJ34970,
             FLJ20321, FLJ12223) and two CpG islands, complete sequence
          Length = 143285

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 253   ctcagaggtatctggacatgagtatgat 280
             |||||||  |||||||||||||||||||
Sbjct: 10735 ctcagagcgatctggacatgagtatgat 10708
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>emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chromosome 11 Contains the 5'
              end of a novel gene, the Sfrs1 gene for
              arginine/serine-rich splicing factor 1 (ASF/SF2), the Vezf1
              gene for vascular endothelial zinc finger 1, a novel gene
              (2210416O15Rik), the gene for the likely ortholog of H.
              sapiens CUE domain containing 1 CUEDC1 (C330016O16Rik), the
              Mrps23 gene for mitochondrial ribosomal protein S23 and two
              CpG islands, complete sequence
          Length = 223276

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 343    aactttccaaactctgagcttcct 366
              ||||||||||||||| ||||||||
Sbjct: 145701 aactttccaaactctcagcttcct 145678
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>gb|BT022752.1| Drosophila melanogaster IP14710 full insert cDNA
          Length = 1664

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  tcaaaaactttccaaactct 357
            ||||||||||||||||||||
Sbjct: 1170 tcaaaaactttccaaactct 1189
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>gb|BT022740.1| Drosophila melanogaster IP14510 full insert cDNA
          Length = 1572

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  tcaaaaactttccaaactct 357
            ||||||||||||||||||||
Sbjct: 1168 tcaaaaactttccaaactct 1187
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>gb|AC008318.7|AC008318 Drosophila melanogaster, chromosome 2L, region 21A-21A, BAC clone
             BACR09J20, complete sequence
          Length = 166626

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   tcaaaaactttccaaactct 357
             ||||||||||||||||||||
Sbjct: 74090 tcaaaaactttccaaactct 74071
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>gb|AF303350.1|AF303350 Drosophila melanogaster DNA-binding transcription factor NET (net)
            mRNA, complete cds
          Length = 2185

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  tcaaaaactttccaaactct 357
            ||||||||||||||||||||
Sbjct: 1192 tcaaaaactttccaaactct 1211
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>gb|AC073289.12| Homo sapiens 3 BAC RP11-478O19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 130251

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 27     caagcaaaaaccagaaggggttta 50
              |||||||| |||||||||||||||
Sbjct: 109098 caagcaaagaccagaaggggttta 109121
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>gb|DQ068020.1| Catathelasma imperiale RNA polymerase II largest subunit (RPB1)
           gene, partial sequence
          Length = 895

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 aagcaaaggatgatgatgag 148
           ||||||||||||||||||||
Sbjct: 410 aagcaaaggatgatgatgag 429
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>emb|AL929338.9| Zebrafish DNA sequence from clone CH211-139G18 in linkage group 17,
             complete sequence
          Length = 179399

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   tgtgtgctgggacaaatgca 192
             ||||||||||||||||||||
Sbjct: 38144 tgtgtgctgggacaaatgca 38163
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>ref|XM_723354.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00094)
           partial mRNA
          Length = 9000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 398 gtgaaaatatttaatcttgt 417
           ||||||||||||||||||||
Sbjct: 155 gtgaaaatatttaatcttgt 136
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 383     tggcgagttttaacagtgaa 402
               ||||||||||||||||||||
Sbjct: 3760597 tggcgagttttaacagtgaa 3760616
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>ref|XM_734594.1| Plasmodium chabaudi chabaudi hypothetical protein (PC001121.02.0)
           partial mRNA
          Length = 1029

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 398 gtgaaaatatttaatcttgt 417
           ||||||||||||||||||||
Sbjct: 155 gtgaaaatatttaatcttgt 136
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>emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on chromosome 2, complete
              sequence
          Length = 196078

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    ccagttcctggagcaagaga 129
              ||||||||||||||||||||
Sbjct: 105463 ccagttcctggagcaagaga 105482


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 97,401,546
Number of extensions: 5343978
Number of successful extensions: 108066
Number of sequences better than 10.0: 58
Number of HSP's gapped: 108066
Number of HSP's successfully gapped: 58
Length of query: 541
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 519
Effective length of database: 18,508,616,841
Effective search space: 9605972140479
Effective search space used: 9605972140479
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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