| Clone Name | FLbaf67g05 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os09g28510:12009.t02529:unspliced-genomic EF hand family protein, expressed| Length = 693 Score = 145 bits (312), Expect = 2e-34 Identities = 64/92 (69%), Positives = 70/92 (76%) Frame = +3 / +1 Query: 114 VTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGIEYA 293 V TRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELR AMR IR RF+G++S++GI YA Sbjct: 160 VATTTRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRRAMRAIRARFTGWRSRQGISYA 339 Query: 294 XXXXXXXXXXXXXXXLIEYAQRSLGLRIVAY* 389 LIEYAQ+SLGLRIVAY* Sbjct: 340 DADGDGYIDDGEVDGLIEYAQKSLGLRIVAY* 435 Score = 68.0 bits (142), Expect(2) = 2e-15 Identities = 35/67 (52%), Positives = 39/67 (58%) Frame = -1 / -2 Query: 295 SAYSMPRLLLYPEKRVRMVRIAHXXXXXXXXXXXXXSNRRSHSLNSSTVMSPSSDRVAAV 116 SA MP LLL+P R RM RIA SNR SHSLNSSTVMSPS DRV Sbjct: 341 SA*LMPCLLLHPVNRARMARIARRSSSRLMRPSRSTSNRLSHSLNSSTVMSPSRDRVVVA 162 Query: 115 TFLIAIS 95 T ++ I+ Sbjct: 161 TVMLLIA 141 Score = 34.1 bits (68), Expect(2) = 2e-15 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -1 / -2 Query: 388 **ATILSPRLLCAYSMR 338 **ATIL PRL CAYSMR Sbjct: 434 **ATILRPRLFCAYSMR 384 Score = 32.2 bits (64), Expect(3) = 7e-07 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +2 / +3 Query: 125 DAVAGRGHDGGRVQ 166 DAV+GR HDGGRVQ Sbjct: 171 DAVSGRRHDGGRVQ 212 Score = 29.5 bits (58), Expect(3) = 7e-07 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +2 / +3 Query: 233 DAHHPDALLGVQEQAWH 283 DA HP A+ GV+EQA H Sbjct: 279 DARHPGAVHGVEEQAGH 329 Score = 27.6 bits (54), Expect(3) = 7e-07 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = +2 / +3 Query: 353 AEEPRAQDRRLL 388 AEEPR QDRRLL Sbjct: 399 AEEPRPQDRRLL 434 Score = 29.0 bits (57), Expect(2) = 0.058 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = -3 / -1 Query: 263 PREARPDGAHR 231 PRE RPDGAHR Sbjct: 309 PREPRPDGAHR 277 Score = 26.7 bits (52), Expect(2) = 0.058 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -3 / -1 Query: 389 LVGDDPEPEAPLR 351 LVGDDPE EA LR Sbjct: 435 LVGDDPEAEALLR 397
>LOC_Os09g28500:12009.t02528:unspliced-genomic EF hand family protein, expressed| Length = 814 Score = 89.0 bits (188), Expect = 3e-17 Identities = 39/78 (50%), Positives = 49/78 (62%) Frame = +3 / +1 Query: 156 DEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGIEYAXXXXXXXXXXXXXX 335 ++FKEW+R+FD D DGRISRDELR AMR + RF+G K +RG+ +A Sbjct: 181 EKFKEWIRQFDTDGDGRISRDELRRAMRAVGVRFTGIKCRRGMSHADADGDGYIDDSEID 360 Query: 336 XLIEYAQRSLGLRIVAY* 389 LIEY R LGL + AY* Sbjct: 361 GLIEYWGRRLGLGVAAY* 414 Score = 31.3 bits (62), Expect(2) = 0.14 Identities = 19/47 (40%), Positives = 21/47 (44%) Frame = -1 / -3 Query: 295 SAYSMPRLLLYPEKRVRMVRIAHXXXXXXXXXXXXXSNRRSHSLNSS 155 SA+ MPRL L P R R+A SN R HSLN S Sbjct: 320 SAWLMPRLHLIPVNRTPTARMARRSSSRLMRPSPSVSNCRIHSLNFS 180 Score = 23.1 bits (44), Expect(2) = 0.14 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -3 / -2 Query: 407 T*LDSSLVGDDPEPEAP 357 T + SLVG D E EAP Sbjct: 432 TSVSGSLVGGDAEAEAP 382
>LOC_Os07g42714:12007.t03921:unspliced-genomic expressed protein| Length = 3625 Score = 81.7 bits (172), Expect = 4e-15 Identities = 35/82 (42%), Positives = 51/82 (62%) Frame = +3 / +1 Query: 144 DMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGIEYAXXXXXXXXXX 323 +MTVD+FK WL++FD D DGRISR ELR A+R FSG K+ R + +A Sbjct: 3058 EMTVDDFKNWLKQFDTDNDGRISRGELREAIRRRGGWFSGLKAGRAVRHADRDNSGFVDE 3237 Query: 324 XXXXXLIEYAQRSLGLRIVAY* 389 L+ +AQ++LG+++ A+* Sbjct: 3238 SEIENLVAFAQKTLGMKVTAW* 3303
>LOC_Os06g11030:12006.t00980:unspliced-genomic EF hand family protein| Length = 300 Score = 67.0 bits (140), Expect = 1e-10 Identities = 25/51 (49%), Positives = 39/51 (76%) Frame = +3 / +1 Query: 141 GDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGIEYA 293 G++TV+EF+ WL +FD D DGRISRDEL+ A+R++ F+ +K++ G+ A Sbjct: 34 GEVTVEEFRAWLGQFDADGDGRISRDELQRALRSLNLWFAWWKARAGVRAA 186
>LOC_Os02g52540:12002.t04835:unspliced-genomic EF hand family protein, expressed| Length = 578 Score = 62.5 bits (130), Expect = 3e-09 Identities = 27/79 (34%), Positives = 44/79 (55%) Frame = +3 / +1 Query: 141 GDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGIEYAXXXXXXXXX 320 G+ TV+EF+ WL +FD + DGRI R+EL A+R++ F+ +K++ + A Sbjct: 76 GETTVEEFRAWLSQFDANGDGRIGREELERALRSLNLWFAWWKAREAMREADANRNGVVD 255 Query: 321 XXXXXXLIEYAQRSLGLRI 377 L +AQR L L++ Sbjct: 256 RDEMVRLYAFAQRHLHLKM 312
>LOC_Os03g27790:12003.t02452:unspliced-genomic EF hand family protein| Length = 574 Score = 46.0 bits (94), Expect = 3e-04 Identities = 19/40 (47%), Positives = 28/40 (70%) Frame = +3 / +1 Query: 147 MTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGY 266 MT++EFK+W +F+ + DGRIS ELR A+R+ FS + Sbjct: 73 MTLEEFKKWFMKFNTNNDGRISGVELREAIRSKGFGFSAW 192
>LOC_Os07g42730:12007.t03922:unspliced-genomic EF hand family protein, expressed| Length = 1207 Score = 42.8 bits (87), Expect = 0.002 Identities = 19/36 (52%), Positives = 23/36 (63%) Frame = +3 / +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFS 260 +D FK WL FD D D ISR ELR A+R+ RF+ Sbjct: 159 LDRFKAWLMHFDGDGDEHISRRELRDAIRSGGARFA 266
>LOC_Os10g31460:12010.t02469:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 8917 Score = 35.0 bits (70), Expect = 0.53 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 / -3 Query: 572 RLRHTLQIHHDRSQTHTSAQISQ*VHKKAKVQ 477 R HTLQ+ H +SQ+HT +I VH + V+ Sbjct: 8558 RTAHTLQLDHTQSQSHTQIRIHHFVHHRHLVR 8463
>LOC_Os12g04360:12012.t00325:unspliced-genomic calmodulin-like protein 1, putative, expressed| Length = 795 Score = 34.5 bits (69), Expect = 0.72 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 / +1 Query: 159 EFKEWLRRFDVDRDGRISRDELRCAMRTI 245 E KE FD D DGRIS +ELR + ++ Sbjct: 409 ELKETFAVFDADGDGRISAEELRAVLASL 495
>LOC_Os11g04560:12011.t00349:unspliced-genomic calmodulin-like protein 1, putative, expressed| Length = 1100 Score = 34.5 bits (69), Expect = 0.72 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 / +2 Query: 159 EFKEWLRRFDVDRDGRISRDELRCAMRTI 245 E KE FD D DGRIS +ELR + ++ Sbjct: 410 ELKETFAVFDADGDGRISAEELRAVLASL 496
>LOC_Os05g31620:12005.t02759:unspliced-genomic polcalcin Jun o 2, putative, expressed| Length = 975 Score = 34.5 bits (69), Expect = 0.72 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 / +1 Query: 156 DEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 DE + R+FD + DGRISR EL R++ Sbjct: 259 DETERVFRKFDANGDGRISRAELAALFRSV 348
>LOC_Os01g72080:12001.t06498:unspliced-genomic calmodulin-like protein 1, putative, expressed| Length = 1207 Score = 34.1 bits (68), Expect = 0.99 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +3 / +3 Query: 87 EQFDMAIRNVTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 E D + V A + DE E + FD D DGRI+ +ELR M I Sbjct: 447 EPDDEELDAVAAIAAEAEAGGGEDELMEAFKVFDADGDGRITAEELRGVMVAI 605
>LOC_Os12g41110:12012.t03788:unspliced-genomic calmodulin, putative, expressed| Length = 886 Score = 33.6 bits (67), Expect = 1.4 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +3 / +2 Query: 141 GDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGIEYA 293 GD +E +E + FD D+DG IS ELR M ++ + + + ++ I A Sbjct: 374 GDAADEELREAFKVFDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIREA 526
>LOC_Os08g24946:12008.t02265:unspliced-genomic expressed protein| Length = 5803 Score = 32.7 bits (65), Expect = 2.6 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 / -2 Query: 536 SQTHTSAQISQ*VHKKAKVQAIDQSLF*QVTC 441 S S Q Q HKK +QA+DQ+ F*++ C Sbjct: 5010 SDVSFSMQSEQKYHKKVYIQAVDQNSF*KLPC 4915
>LOC_Os05g13580:12005.t01136:unspliced-genomic calmodulin-related protein 2, touch-induced, putative, expressed| Length = 941 Score = 32.7 bits (65), Expect = 2.6 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +3 / +1 Query: 147 MTVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 M + E ++ RR+D + DG+IS +EL +R + Sbjct: 124 MPMAELEQVFRRYDANGDGKISAEELASVLRAL 222
>LOC_Os12g33070:12012.t03000:unspliced-genomic myb transcription factor, putative, expressed| Length = 2976 Score = 32.7 bits (65), Expect = 2.6 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +1 / -3 Query: 478 CTFAFLCTYWLICADVCVCDLS*CICSVWRR 570 C+ C + C C C *C CSVW R Sbjct: 2788 CSSCC*CCCYYHCCSCCCCCCL*CCCSVWPR 2696
>LOC_Os05g03010:12005.t00198:unspliced-genomic hypothetical protein| Length = 2006 Score = 26.3 bits (51), Expect(2) = 2.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +2 / -3 Query: 398 QARSIKGS*LHIYPCMLPARISFDQSP 478 Q ++ G+ LH+ PC LP S D P Sbjct: 1170 QRETLLGALLHVTPCHLPPHGSDDLLP 1090 Score = 23.5 bits (45), Expect(2) = 2.6 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = +1 / -1 Query: 556 SVWRRRPAGSPLP 594 S WRRRP P P Sbjct: 1076 SYWRRRPLTQPSP 1038
>LOC_Os02g51040:12002.t04688:unspliced-genomic alpha-expansin 15 precursor, putative, expressed| Length = 1660 Score = 27.6 bits (54), Expect(2) = 2.7 Identities = 10/34 (29%), Positives = 15/34 (44%) Frame = +1 / +1 Query: 415 GKLAPYLSMHVTC*NKL*SIACTFAFLCTYWLIC 516 G + + S C*N + S C F C + + C Sbjct: 313 GTMGTFFSRCALC*NVVTSACCAHCFACAFLVAC 414 Score = 22.1 bits (42), Expect(2) = 2.7 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = +2 / +2 Query: 560 CGAGGRQVRLCLPG 601 C AGG CLPG Sbjct: 533 CDAGGGGSHSCLPG 574
>LOC_Os07g22710:12007.t01974:unspliced-genomic CDPK-related protein kinase, putative, expressed| Length = 8609 Score = 32.2 bits (64), Expect = 3.5 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 / +2 Query: 174 LRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGI 284 L D+DRDG+IS DE R ++T ++ R + Sbjct: 8207 LEEADIDRDGKISLDEFRRLLKTASMSSRNVQTPRSV 8317
>LOC_Os01g56030:12001.t05012:unspliced-genomic calmodulin-like protein 41, putative, expressed| Length = 1113 Score = 32.2 bits (64), Expect = 3.5 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = +3 / +2 Query: 159 EFKEWLRRFDVDRDGRISRDELR 227 E +E FD D DGRIS DELR Sbjct: 290 ELREIFGHFDRDMDGRISGDELR 358
>LOC_Os01g72540:12001.t06542:unspliced-genomic calmodulin-like protein 41, putative| Length = 456 Score = 31.8 bits (63), Expect = 4.9 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 / +1 Query: 156 DEFKEWLRRFDVDRDGRISRDELRCAMR 239 DEF+ FD D DG+IS ELR ++ Sbjct: 13 DEFRRVFGSFDQDGDGKISATELRLCVK 96
>LOC_Os01g72100:12001.t06499:unspliced-genomic polcalcin Jun o 2, putative, expressed| Length = 1093 Score = 31.3 bits (62), Expect = 6.7 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +3 / +3 Query: 156 DEFKEWLRRFDVDRDGRISRDEL 224 +E + R+FD + DGRISR EL Sbjct: 183 EEMERVFRKFDANGDGRISRSEL 251
>LOC_Os01g17190:12001.t01566:unspliced-genomic calmodulin, putative, expressed| Length = 1701 Score = 31.3 bits (62), Expect = 6.7 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +3 / +1 Query: 132 SLDGDMTVDEFKEWLRRFDVDRDGRISRDE 221 +L +T +E +E +R DVD DG+I+ DE Sbjct: 1222 NLGEKLTDEEVEEMIREADVDGDGQINYDE 1311
>LOC_Os01g04330:12001.t00321:unspliced-genomic calmodulin-related protein 2, touch-induced, putative, expressed| Length = 911 Score = 31.3 bits (62), Expect = 6.7 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +3 / +3 Query: 159 EFKEWLRRFDVDRDGRISRDELRCAMRTI 245 E + RFD D DGRIS EL R I Sbjct: 162 EIERVFTRFDADGDGRISPSELAAVTRAI 248
>LOC_Os11g35060:12011.t03055:unspliced-genomic agenet domain containing protein| Length = 4334 Score = 31.3 bits (62), Expect = 6.7 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +2 / -3 Query: 101 GDQERDGGDAVAGRGHDGG 157 GD ERDG DA A HD G Sbjct: 507 GDGERDGDDAAAAAEHDAG 451
>LOC_Os07g13880:12007.t01252:unspliced-genomic soluble starch synthase 2-3, chloroplast precursor, putative| Length = 845 Score = 31.3 bits (62), Expect = 6.7 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +1 / -3 Query: 556 SVWRRRPAGSPLPTRLPSML 615 S WRRRP +P P R P L Sbjct: 429 SCWRRRPVSAPAPVRSPCAL 370
>LOC_Os07g06950:12007.t00574:unspliced-genomic ubiquitin carboxyl-terminal hydrolase 7, putative, expressed| Length = 12788 Score = 31.3 bits (62), Expect = 6.7 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 / +1 Query: 479 VPSLSCVLIG*SVPTCAFVIYHDVF 553 V L VL G ++PTC FV HD+F Sbjct: 1795 VKLLIYVLRGCTIPTCTFVHIHDIF 1869
>LOC_Os04g37430:12004.t03314:unspliced-genomic lipoxygenase 5, putative, expressed| Length = 4257 Score = 31.3 bits (62), Expect = 6.7 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = -1 / -3 Query: 559 RCKYIMIDHKRTRRHRLANKYTRKRRYRRLIKAYSSR*HAWIDMELASLNRPS 401 R ++ H TR ++ NK++ +R R + + R H + + + S RPS Sbjct: 3292 RLARVLHGHASTRHNQTPNKFSHRRCTRTALWSLQERKHFDVYLRMRSAGRPS 3134
>LOC_Os01g64920:12001.t05858:unspliced-genomic nuclear matrix protein 1, putative, expressed| Length = 3431 Score = 31.3 bits (62), Expect = 6.7 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +1 / +2 Query: 478 CTFAFLCTYWLICADVCVCDLS*CICS 558 C+ + +C WL+ +C L C+CS Sbjct: 2615 CSKSIICFLWLVVLPLCQLSLCSCVCS 2695
>LOC_Os06g45460:12006.t04234:unspliced-genomic UNUSUAL FLORAL ORGANS protein, putative| Length = 1306 Score = 25.8 bits (50), Expect(2) = 6.9 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = +2 / +1 Query: 524 CAFVIYHDVFAACGAGGRQ 580 C+ V+ H++ A CG+G R+ Sbjct: 712 CS*VLLHELVAVCGSGVRR 768 Score = 25.4 bits (49), Expect(2) = 6.9 Identities = 9/20 (45%), Positives = 10/20 (50%) Frame = +1 / +3 Query: 562 WRRRPAGSPLPTRLPSMLIC 621 WRRRP S P R + C Sbjct: 1236 WRRRPLASSTPRRPSPCMAC 1295
>LOC_Os08g44660:12008.t04189:unspliced-genomic EF hand family protein, expressed| Length = 2280 Score = 30.9 bits (61), Expect = 9.2 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +3 / +1 Query: 177 RRFDVDRDGRISRDELRCAMRTI 245 +RFD + DG+IS EL A+RT+ Sbjct: 40 KRFDTNGDGKISLSELTDALRTL 108
>LOC_Os06g49450:12006.t04629:unspliced-genomic expressed protein| Length = 6454 Score = 30.9 bits (61), Expect = 9.2 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -3 / -1 Query: 626 RGQINIDGNLVGKGEPAGRLRHTLQIHHDRSQTHTSAQISQ 504 RG G L G EPA RLRH +H +Q + + Q Sbjct: 448 RGTSGFRGALDGDREPARRLRHPAALHRPVNQLKPNKESKQ 326
>LOC_Os01g72550:12001.t06543:unspliced-genomic calmodulin-like protein 41, putative| Length = 441 Score = 30.9 bits (61), Expect = 9.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 / +1 Query: 159 EFKEWLRRFDVDRDGRISRDELRCAMR 239 EF+ FD D DG+IS ELR M+ Sbjct: 19 EFRRVFSAFDRDADGKISAAELRLCMK 99
>LOC_Os03g15740:12003.t01360:unspliced-genomic calcium ion binding protein, putative, expressed| Length = 3159 Score = 30.9 bits (61), Expect = 9.2 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +2 / -1 Query: 107 QERDGGDAVAGRGHDGGRV 163 QER GG GRG GGRV Sbjct: 579 QERRGGGGAGGRGRGGGRV 523
>LOC_Os01g11940:12001.t01063:unspliced-genomic OsFTL1 - Rice FT-Like1 homogous to Arabidopsis Flowering Locus T| gene, expressed Length = 5254 Score = 30.9 bits (61), Expect = 9.2 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +2 / -1 Query: 557 ACGAGGRQVRLCLPGCRRC 613 A G GG VR +PGCRRC Sbjct: 625 AGGDGGGGVRTYVPGCRRC 569 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 171,590,017 Number of extensions: 2442408 Number of successful extensions: 12547 Number of sequences better than 10.0: 35 Length of query: 217 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 169 Effective length of database: 52,912,542 Effective search space: 8942219598 Effective search space used: 8942219598 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)