ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf67g05 |
|---|---|
| Clone Library Name | barley_pub |
>P54357:MLC2_DROME Myosin-2 essential light chain - Drosophila melanogaster (Fruit| fly) Length = 147 Score = 34.3 bits (77), Expect = 0.41 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = +3 Query: 93 FDMAIRNVTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 F++ + A +++ GD T D+F E LR FD D G IS ELR + T+ Sbjct: 63 FEVFLPIYQAISKARSGD-TADDFIEGLRHFDKDASGYISSAELRHLLTTL 112
>O77460:IPYR_DROME Inorganic pyrophosphatase - Drosophila melanogaster (Fruit fly)| Length = 338 Score = 34.3 bits (77), Expect = 0.41 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -1 Query: 577 PAACATRCKYIMIDHKRTRRHRLA 506 PAA A+ C+YI I+ KRT+ H +A Sbjct: 27 PAALASNCRYIQIERKRTKSHEMA 50
>O35648:CETN3_MOUSE Centrin-3 - Mus musculus (Mouse)| Length = 167 Score = 32.7 bits (73), Expect = 1.2 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +3 Query: 99 MAIRNVTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAM 236 +++RN+ R L +M+ +E + + FD D DG I+++E M Sbjct: 118 ISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163
>O15182:CETN3_HUMAN Centrin-3 - Homo sapiens (Human)| Length = 167 Score = 32.7 bits (73), Expect = 1.2 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +3 Query: 99 MAIRNVTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAM 236 +++RN+ R L +M+ +E + + FD D DG I+++E M Sbjct: 118 ISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163
>P30188:CALL1_ARATH Calmodulin-like protein 1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 216 Score = 32.3 bits (72), Expect = 1.5 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = +3 Query: 96 DMAIRNVTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDEL 224 D+A R A S +G + +E +E FDVDR+G+IS +EL Sbjct: 127 DLASR---VAGTSGEGSVETEELREVFEIFDVDRNGKISAEEL 166
>P04630:CALL_CAEEL Calmodulin-like protein - Caenorhabditis elegans| Length = 161 Score = 32.0 bits (71), Expect = 2.0 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 +DEF+E FD D +G IS EL AMR++ Sbjct: 23 IDEFREAFMMFDKDGNGTISTKELGIAMRSL 53
>P57796:CABP4_HUMAN Calcium-binding protein 4 - Homo sapiens (Human)| Length = 275 Score = 32.0 bits (71), Expect = 2.0 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +3 Query: 141 GDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 G +DE + FD DRDG IS EL MRT+ Sbjct: 127 GPEELDELQAAFEEFDTDRDGYISHRELGDCMRTL 161
>P32599:FIMB_YEAST Fimbrin - Saccharomyces cerevisiae (Baker's yeast)| Length = 642 Score = 31.6 bits (70), Expect = 2.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +3 Query: 132 SLDGDMTVDEFKEWLRRFDVDRDGRISRDE 221 S DGD T DE +E L+ VD GR+ D+ Sbjct: 46 SKDGDATYDEARETLKHVGVDASGRVELDD 75
>Q6FW76:CLF1_CANGA Pre-mRNA-splicing factor CLF1 - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 695 Score = 31.6 bits (70), Expect = 2.6 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +3 Query: 123 ATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGIE 287 A + D D+ D +K ++F +D + +EL+ R RT F GY + ++ Sbjct: 6 AKQITDNDILKDVYKSQNKQFSIDAIDILDLEELKDVQRRKRTEFEGYLKRNRLD 60
>P05933:CALM_SCHPO Calmodulin - Schizosaccharomyces pombe (Fission yeast)| Length = 150 Score = 31.6 bits (70), Expect = 2.6 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = +3 Query: 126 TRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 TR+L D + EF+E FD D+DG I+ +EL MR++ Sbjct: 3 TRNLT-DEQIAEFREAFSLFDRDQDGNITSNELGVVMRSL 41
>O88751:CABP1_RAT Calcium-binding protein 1 - Rattus norvegicus (Rat)| Length = 298 Score = 31.6 bits (70), Expect = 2.6 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYK 269 V E ++ R FD + DG IS ELR AMR + G++ Sbjct: 232 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR 270
>Q9JLK7:CABP1_MOUSE Calcium-binding protein 1 - Mus musculus (Mouse)| Length = 227 Score = 31.6 bits (70), Expect = 2.6 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYK 269 V E ++ R FD + DG IS ELR AMR + G++ Sbjct: 161 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR 199
>Q9NZU7:CABP1_HUMAN Calcium-binding protein 1 - Homo sapiens (Human)| Length = 227 Score = 31.6 bits (70), Expect = 2.6 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYK 269 V E ++ R FD + DG IS ELR AMR + G++ Sbjct: 161 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR 199
>Q9N1R0:CABP1_BOVIN Calcium-binding protein 1 - Bos taurus (Bovine)| Length = 226 Score = 31.6 bits (70), Expect = 2.6 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYK 269 V E ++ R FD + DG IS ELR AMR + G++ Sbjct: 160 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR 198
>Q9NPB3:CABP2_HUMAN Calcium-binding protein 2 - Homo sapiens (Human)| Length = 220 Score = 31.2 bits (69), Expect = 3.4 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 V E ++ R FD + DGRIS ELR A++ + Sbjct: 154 VRELRDAFREFDTNGDGRISVGELRAALKAL 184
>P25070:TCH2_ARATH Calmodulin-related protein 2, touch-induced - Arabidopsis thaliana| (Mouse-ear cress) Length = 161 Score = 30.8 bits (68), Expect = 4.5 Identities = 13/32 (40%), Positives = 23/32 (71%) Frame = +3 Query: 150 TVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 ++D+ K+ +RFD + DG+IS DEL+ +R + Sbjct: 14 SMDDIKKVFQRFDKNGDGKISVDELKEVIRAL 45
>Q6P698:PLSL_DANRE Plastin-2 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 624 Score = 30.8 bits (68), Expect = 4.5 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGIE 287 ++E +E + DVD +G IS DEL + GY+ + I+ Sbjct: 11 MEELREAFTKVDVDGNGHISTDELNALFKAANLPLPGYRVREIIQ 55
>P06704:CDC31_YEAST Cell division control protein 31 - Saccharomyces cerevisiae| (Baker's yeast) Length = 161 Score = 30.8 bits (68), Expect = 4.5 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = +3 Query: 99 MAIRNVTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDE 221 ++I+N+ + L +T +E + + FD+D DG I+ +E Sbjct: 113 ISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENE 153
>P61859:CALM_NEUCR Calmodulin - Neurospora crassa| Length = 149 Score = 30.8 bits (68), Expect = 4.5 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 V EFKE FD D DG+I+ EL MR++ Sbjct: 10 VSEFKEAFSLFDKDGDGQITTKELGTVMRSL 40
>Q9UWF0:CALM_MAGGR Calmodulin - Magnaporthe grisea (Rice blast fungus) (Pyricularia| grisea) Length = 149 Score = 30.8 bits (68), Expect = 4.5 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 V EFKE FD D DG+I+ EL MR++ Sbjct: 10 VSEFKEAFSLFDKDGDGQITTKELGTVMRSL 40
>P61860:CALM_COLTR Calmodulin - Colletotrichum trifolii| Length = 149 Score = 30.8 bits (68), Expect = 4.5 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 V EFKE FD D DG+I+ EL MR++ Sbjct: 10 VSEFKEAFSLFDKDGDGQITTKELGTVMRSL 40
>P61861:CALM_COLGL Calmodulin - Colletotrichum gloeosporioides (Anthracnose fungus)| (Glomerella cingulata) Length = 149 Score = 30.8 bits (68), Expect = 4.5 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +3 Query: 153 VDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 V EFKE FD D DG+I+ EL MR++ Sbjct: 10 VSEFKEAFSLFDKDGDGQITTKELGTVMRSL 40
>P23286:CALM_CANAL Calmodulin - Candida albicans (Yeast)| Length = 149 Score = 30.8 bits (68), Expect = 4.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 144 DMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 + + EFKE FD D DG+I+ EL MR++ Sbjct: 7 EQQIAEFKEAFSLFDKDSDGKITTKELGTVMRSL 40
>P27164:CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia)| Length = 184 Score = 30.8 bits (68), Expect = 4.5 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +3 Query: 132 SLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFSGYKSKRGI 284 +L +T +E E +R DVD DG+I+ +E M R R +SKR + Sbjct: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMANRRRRRIEESKRSV 162
>P38856:YHW1_YEAST Uncharacterized protein YHR161C - Saccharomyces cerevisiae (Baker's| yeast) Length = 637 Score = 30.4 bits (67), Expect = 5.9 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Frame = +3 Query: 84 LEQFDMAIRNVTAATRSLDGDM-TVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTRFS 260 LE FD I N+ + S GDM +D + +L+ G+I +D +R RT++ Sbjct: 83 LEFFD--IENIRGSNGSASGDMRALDRYDNYLK-VRCREFGKIKKDYVRDGYRTLKLNSG 139 Query: 261 GYKSKRGIEYA 293 Y S R +++ Sbjct: 140 NYGSSRNKQHS 150
>O82040:POLC7_PHLPR Polcalcin Phl p 7 - Phleum pratense (Common timothy)| Length = 78 Score = 30.4 bits (67), Expect = 5.9 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +3 Query: 156 DEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 D+ + +RFD + DG+IS EL A+RT+ Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTL 32
>P09485:LPS1A_LYTPI Calcium-binding protein LPS1-alpha - Lytechinus pictus (Painted sea| urchin) Length = 321 Score = 30.4 bits (67), Expect = 5.9 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = +3 Query: 90 QFDMAIRNVTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTIRTR 254 QFD I + +T+ + + DE K+ D D +GRIS DEL +R I T+ Sbjct: 68 QFDEFILYMEGSTK--ERLYSSDEIKQMFDDLDKDGNGRISPDELNKGVREIYTK 120
>O14815:CAN9_HUMAN Calpain-9 - Homo sapiens (Human)| Length = 690 Score = 30.4 bits (67), Expect = 5.9 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = +3 Query: 156 DEFKEWLR---RFDVDRDGRISRDELRCAMRTIRTRFSGY 266 D+ K+W+ RFD D+ G +S ELR A++ + S + Sbjct: 591 DKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSH 630
>P25071:TCH3_ARATH Calmodulin-related protein 3, touch-induced - Arabidopsis thaliana| (Mouse-ear cress) Length = 324 Score = 30.0 bits (66), Expect = 7.7 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +3 Query: 144 DMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 D + EF+E R FD + DG I+ +ELR MR++ Sbjct: 186 DDQILEFREAFRVFDKNGDGYITVNELRTTMRSL 219
>O74435:CDC31_SCHPO Cell division control protein 31 - Schizosaccharomyces pombe| (Fission yeast) Length = 176 Score = 30.0 bits (66), Expect = 7.7 Identities = 12/46 (26%), Positives = 25/46 (54%) Frame = +3 Query: 99 MAIRNVTAATRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAM 236 +++RN+ + L+ ++ E + + FD+D+DG I+ E M Sbjct: 127 ISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIM 172
>Q24956:CATR_GIALA Caltractin - Giardia lamblia (Giardia intestinalis)| Length = 176 Score = 30.0 bits (66), Expect = 7.7 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 126 TRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRCAMRTI 245 TR+ + E +E FD DR GRI EL+ AMR + Sbjct: 24 TRAEVSEEMKHEIREAFDLFDADRSGRIDFHELKVAMRAL 63 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 77,394,429 Number of extensions: 1452669 Number of successful extensions: 4136 Number of sequences better than 10.0: 31 Number of HSP's gapped: 4096 Number of HSP's successfully gapped: 31 Length of query: 217 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 108 Effective length of database: 70,788,284 Effective search space: 7645134672 Effective search space used: 7645134672 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
