ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf70h19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160O05, full insert sequence Length = 1941 Score = 462 bits (233), Expect = e-126 Identities = 463/539 (85%), Gaps = 3/539 (0%) Strand = Plus / Plus Query: 1086 aagacacgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctg 1145 |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 931 aagacacgaatgagatggactcctgaacttcatgagcgctttgtagatgctgtcaatcta 990 Query: 1146 cttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataat 1205 |||||||||||||||||||||||||| || || ||| | ||| ||||||||||||| ||| Sbjct: 991 cttggtggcagtgaaaaagctactcccaagggtgtgttaaagctaatgaaggcagacaat 1050 Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaactgcccgatatagacca 1265 ||||||||||||||||| |||||||| |||||||| |||||||| || ||||| |||||| Sbjct: 1051 ttgaccatttatcatgttaaaagtcaccttcagaaatacagaacagctcgatacagacca 1110 Query: 1266 gaattatctgaaggttcatcagaaaggttggaggcctcaaaagaggatttgccatctata 1325 ||||| ||||||||||| ||||||| | || |||||||||||||| | ||||| ||| Sbjct: 1111 gaattgtctgaaggttcttcagaaaagaaggcagcctcaaaagaggacataccatcaata 1170 Query: 1326 gaccttaaagg---gaattttgatctcaccgaagcattacgtctccagttagaacttcaa 1382 || || ||||| ||| ||||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 1171 gatctgaaaggagggaactttgatctcactgaggcattgcgtctccagttagaactccaa 1230 Query: 1383 aagcggctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaa 1442 ||| |||| |||||||| |||||| | ||||||||| ||||||||||||| ||||||||| Sbjct: 1231 aagaggcttcatgaacagcttgagatccaaagaagtttgcagctgagaattgaggagcaa 1290 Query: 1443 gggaagtgccttcagattatgatcgagcagcaatgcaatcctgctgcagacaaggcgctg 1502 ||||||||||||||||| ||| |||||||||| |||| |||| ||||||||||| || Sbjct: 1291 gggaagtgccttcagatgatgctcgagcagcagtgcatacctgggacagacaaggcggtg 1350 Query: 1503 gatgcttcaacgtcggcagaaggatcaaagttaccttctgaccccccagaatcttctacc 1562 ||||||||||| || ||||||||| ||||| | ||||||| | |||||||||||| || Sbjct: 1351 gatgcttcaacctcagcagaaggaacaaagccatcttctgatcttccagaatcttctgcc 1410 Query: 1563 gtgaaggatgttccaaataacagtcaaaatggaacaaccgagcgagcagaatcaggtga 1621 ||||||||||||||| | |||||||| || |||| | || | | | ||||||||||||| Sbjct: 1411 gtgaaggatgttccagagaacagtcagaacggaatagccaaacaaacagaatcaggtga 1469 Score = 182 bits (92), Expect = 3e-42 Identities = 515/656 (78%), Gaps = 15/656 (2%) Strand = Plus / Plus Query: 321 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 380 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 190 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 249 Query: 381 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 434 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 250 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 309 Query: 435 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaa-- 492 | ||||||||||| || |||||||||| ||||||| |||||| | || |||||||| | Sbjct: 310 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 369 Query: 493 ----gtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 548 || ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 370 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 429 Query: 549 ttgcgttcgcccccggctgtaaggttctcttcagttccgaaccccgagcagtatgccggt 608 |||||||| ||| ||| ||||||||||||||||| | | | ||||| ||| | | Sbjct: 430 ctgcgttcgtcccaggcgataaggttctcttcagtttcaagcaatgagcaatatacaaat 489 Query: 609 gccaatccttacatttctcagacgccaagcactggaagttcttcagcgatgatttatgga 668 ||||||||||||| |||||| |||| || | ||| ||||||||| || | | ||||||| Sbjct: 490 gccaatccttacaattctcaaccgccgagtagtgggagttcttcaacgctcaattatgga 549 Query: 669 tcacaccatgaaggctttgaacctacttttaatggttttccaagagatgttggaccaacg 728 ||||| ||| ||||||||||||| | || | || |||||||||||||| ||| || ||| Sbjct: 550 tcacaatatggaggctttgaaccttccttgactgattttccaagagatgctgggccgacg 609 Query: 729 tggtgccctgatccagttgagagcatgcttgaattctccgatgacgtccctgttggaaac 788 ||||| |||||||||||||| || |||||| || | ||||| ||||||| ||| ||| Sbjct: 610 tggtgtcctgatccagttgatggcttgcttggatatacagatgatgtccctgctgggaac 669 Query: 789 aatttgactggcatcagtcctattgcagctacagatgagctcgctaagcagactgaatgg 848 |||||||||| | |||| ||||||||||| ||||| || || ||||| | ||||||| Sbjct: 670 aatttgactgaaaacagttctattgcagctggtgatgaacttgccaagcaaagtgaatgg 729 Query: 849 tggacggattttatgaacgatgactggaaggacattgctgacaacgtaggtggtgcgaaa 908 |||| ||||||||||| |||||||||| || || ||| ||| || | || | || Sbjct: 730 tggaatgattttatgaattatgactggaaagatat---tgataacacagcttgtactgaa 786 Query: 909 actcaaccacaggctggaccggctgtgcaaccatcgatttcagttcaccaatcagc 964 ||||||||||||| |||||| |||| |||| |||| | |||||||||||||||| Sbjct: 787 actcaaccacaggttggaccagctgcgcaatcatctgtcgcagttcaccaatcagc 842 Score = 61.9 bits (31), Expect = 8e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 1838 cagaaggcagcgcaagcaaattcgcactgatgtactgttt-tgagggggtttgacttct 1895 ||||||||||| |||||||||| ||||||||||||| ||| | ||| |||||||||||| Sbjct: 1720 cagaaggcagcacaagcaaatttgcactgatgtactctttgtcaggtggtttgacttct 1778
>dbj|AK060412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E04, full insert sequence Length = 1873 Score = 462 bits (233), Expect = e-126 Identities = 463/539 (85%), Gaps = 3/539 (0%) Strand = Plus / Plus Query: 1086 aagacacgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctg 1145 |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 949 aagacacgaatgagatggactcctgaacttcatgagcgctttgtagatgctgtcaatcta 1008 Query: 1146 cttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataat 1205 |||||||||||||||||||||||||| || || ||| | ||| ||||||||||||| ||| Sbjct: 1009 cttggtggcagtgaaaaagctactcccaagggtgtgttaaagctaatgaaggcagacaat 1068 Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaactgcccgatatagacca 1265 ||||||||||||||||| |||||||| |||||||| |||||||| || ||||| |||||| Sbjct: 1069 ttgaccatttatcatgttaaaagtcaccttcagaaatacagaacagctcgatacagacca 1128 Query: 1266 gaattatctgaaggttcatcagaaaggttggaggcctcaaaagaggatttgccatctata 1325 ||||| ||||||||||| ||||||| | || |||||||||||||| | ||||| ||| Sbjct: 1129 gaattgtctgaaggttcttcagaaaagaaggcagcctcaaaagaggacataccatcaata 1188 Query: 1326 gaccttaaagg---gaattttgatctcaccgaagcattacgtctccagttagaacttcaa 1382 || || ||||| ||| ||||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 1189 gatctgaaaggagggaactttgatctcactgaggcattgcgtctccagttagaactccaa 1248 Query: 1383 aagcggctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaa 1442 ||| |||| |||||||| |||||| | ||||||||| ||||||||||||| ||||||||| Sbjct: 1249 aagaggcttcatgaacagcttgagatccaaagaagtttgcagctgagaattgaggagcaa 1308 Query: 1443 gggaagtgccttcagattatgatcgagcagcaatgcaatcctgctgcagacaaggcgctg 1502 ||||||||||||||||| ||| |||||||||| |||| |||| ||||||||||| || Sbjct: 1309 gggaagtgccttcagatgatgctcgagcagcagtgcatacctgggacagacaaggcggtg 1368 Query: 1503 gatgcttcaacgtcggcagaaggatcaaagttaccttctgaccccccagaatcttctacc 1562 ||||||||||| || ||||||||| ||||| | ||||||| | |||||||||||| || Sbjct: 1369 gatgcttcaacctcagcagaaggaacaaagccatcttctgatcttccagaatcttctgcc 1428 Query: 1563 gtgaaggatgttccaaataacagtcaaaatggaacaaccgagcgagcagaatcaggtga 1621 ||||||||||||||| | |||||||| || |||| | || | | | ||||||||||||| Sbjct: 1429 gtgaaggatgttccagagaacagtcagaacggaatagccaaacaaacagaatcaggtga 1487 Score = 182 bits (92), Expect = 3e-42 Identities = 515/656 (78%), Gaps = 15/656 (2%) Strand = Plus / Plus Query: 321 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 380 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 208 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 267 Query: 381 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 434 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 268 ccatcgcctctgcctgctatactagctaccctggatgaaaacattcccaggattccagat 327 Query: 435 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaa-- 492 | ||||||||||| || |||||||||| ||||||| |||||| | || |||||||| | Sbjct: 328 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 387 Query: 493 ----gtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 548 || ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 388 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 447 Query: 549 ttgcgttcgcccccggctgtaaggttctcttcagttccgaaccccgagcagtatgccggt 608 |||||||| ||| ||| ||||||||||||||||| | | | ||||| ||| | | Sbjct: 448 ctgcgttcgtcccaggcgataaggttctcttcagtttcaagcaatgagcaatatacaaat 507 Query: 609 gccaatccttacatttctcagacgccaagcactggaagttcttcagcgatgatttatgga 668 ||||||||||||| |||||| |||| || | ||| ||||||||| || | | ||||||| Sbjct: 508 gccaatccttacaattctcaaccgccgagtagtgggagttcttcaacgctcaattatgga 567 Query: 669 tcacaccatgaaggctttgaacctacttttaatggttttccaagagatgttggaccaacg 728 ||||| ||| ||||||||||||| | || | || |||||||||||||| ||| || ||| Sbjct: 568 tcacaatatggaggctttgaaccttccttgactgattttccaagagatgctgggccgacg 627 Query: 729 tggtgccctgatccagttgagagcatgcttgaattctccgatgacgtccctgttggaaac 788 ||||| |||||||||||||| || |||||| || | ||||| ||||||| ||| ||| Sbjct: 628 tggtgtcctgatccagttgatggcttgcttggatatacagatgatgtccctgctgggaac 687 Query: 789 aatttgactggcatcagtcctattgcagctacagatgagctcgctaagcagactgaatgg 848 |||||||||| | |||| ||||||||||| ||||| || || ||||| | ||||||| Sbjct: 688 aatttgactgaaaacagttctattgcagctggtgatgaacttgccaagcaaagtgaatgg 747 Query: 849 tggacggattttatgaacgatgactggaaggacattgctgacaacgtaggtggtgcgaaa 908 |||| ||||||||||| |||||||||| || || ||| ||| || | || | || Sbjct: 748 tggaatgattttatgaattatgactggaaagatat---tgataacacagcttgtactgaa 804 Query: 909 actcaaccacaggctggaccggctgtgcaaccatcgatttcagttcaccaatcagc 964 ||||||||||||| |||||| |||| |||| |||| | |||||||||||||||| Sbjct: 805 actcaaccacaggttggaccagctgcgcaatcatctgtcgcagttcaccaatcagc 860 Score = 61.9 bits (31), Expect = 8e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 1838 cagaaggcagcgcaagcaaattcgcactgatgtactgttt-tgagggggtttgacttct 1895 ||||||||||| |||||||||| ||||||||||||| ||| | ||| |||||||||||| Sbjct: 1738 cagaaggcagcacaagcaaatttgcactgatgtactctttgtcaggtggtttgacttct 1796
>dbj|AK103195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121P15, full insert sequence Length = 1210 Score = 244 bits (123), Expect = 1e-60 Identities = 201/227 (88%) Strand = Plus / Plus Query: 1086 aagacacgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctg 1145 |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 944 aagacacgaatgagatggactcctgaacttcatgagcgctttgtagatgctgtcaatcta 1003 Query: 1146 cttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataat 1205 |||||||||||||||||||||||||| || || ||| | ||| ||||||||||||| ||| Sbjct: 1004 cttggtggcagtgaaaaagctactcccaagggtgtgttaaagctaatgaaggcagacaat 1063 Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaactgcccgatatagacca 1265 ||||||||||||||||| |||||||| |||||||| |||||||| || ||||| |||||| Sbjct: 1064 ttgaccatttatcatgttaaaagtcaccttcagaaatacagaacagctcgatacagacca 1123 Query: 1266 gaattatctgaaggttcatcagaaaggttggaggcctcaaaagagga 1312 ||||| ||||||||||| ||||||| | || |||||||||||||| Sbjct: 1124 gaattgtctgaaggttcttcagaaaagaaggcagcctcaaaagagga 1170 Score = 167 bits (84), Expect = 2e-37 Identities = 514/656 (78%), Gaps = 16/656 (2%) Strand = Plus / Plus Query: 321 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 380 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 204 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 263 Query: 381 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 434 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 264 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 323 Query: 435 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaa-- 492 | ||||||||||| || || ||||||| ||||||| |||||| | || |||||||| | Sbjct: 324 gggcagaatgttccgcggg-gagagaattgagaagcacacctatgccacctcatcagaat 382 Query: 493 ----gtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 548 || ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 383 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 442 Query: 549 ttgcgttcgcccccggctgtaaggttctcttcagttccgaaccccgagcagtatgccggt 608 |||||||| ||| ||| ||||||||||||||||| | | | ||||| ||| | | Sbjct: 443 ctgcgttcgtcccaggcgataaggttctcttcagtttcaagcaatgagcaatatacaaat 502 Query: 609 gccaatccttacatttctcagacgccaagcactggaagttcttcagcgatgatttatgga 668 ||||||||||||| |||||| |||| || | ||| ||||||||| || | | ||||||| Sbjct: 503 gccaatccttacaattctcaaccgccgagtagtgggagttcttcaacgctcaattatgga 562 Query: 669 tcacaccatgaaggctttgaacctacttttaatggttttccaagagatgttggaccaacg 728 ||||| ||| ||||||||||||| | || | || |||||||||||||| ||| || ||| Sbjct: 563 tcacaatatggaggctttgaaccttccttgactgattttccaagagatgctgggccgacg 622 Query: 729 tggtgccctgatccagttgagagcatgcttgaattctccgatgacgtccctgttggaaac 788 ||||| |||||||||||||| || |||||| || | ||||| ||||||| ||| ||| Sbjct: 623 tggtgtcctgatccagttgatggcttgcttggatatacagatgatgtccctgctgggaac 682 Query: 789 aatttgactggcatcagtcctattgcagctacagatgagctcgctaagcagactgaatgg 848 |||||||||| | |||| ||||||||||| ||||| || || ||||| | ||||||| Sbjct: 683 aatttgactgaaaacagttctattgcagctggtgatgaacttgccaagcaaagtgaatgg 742 Query: 849 tggacggattttatgaacgatgactggaaggacattgctgacaacgtaggtggtgcgaaa 908 |||| ||||||||||| |||||||||| || || ||| ||| || | || | || Sbjct: 743 tggaatgattttatgaattatgactggaaagatat---tgataacacagcttgtactgaa 799 Query: 909 actcaaccacaggctggaccggctgtgcaaccatcgatttcagttcaccaatcagc 964 ||||||||||||| |||||| |||| |||| |||| | |||||||||||||||| Sbjct: 800 actcaaccacaggttggaccagctgcgcaatcatctgtcgcagttcaccaatcagc 855
>gb|AY105646.1| Zea mays PCO146542 mRNA sequence Length = 645 Score = 244 bits (123), Expect = 1e-60 Identities = 256/299 (85%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 1182 ctgaagttaatgaaggcagataatttgaccatttatcatgtaaaaagtcatcttcagaag 1241 |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19 ctgaagctaatgaaggcagacaatttgaccatttatcatgtaaaaagtcatcttcagaaa 78 Query: 1242 tacagaactgcccgatatagaccagaattatctgaaggttcatcagaaaggttggaggcc 1301 |||||||| || |||| |||||||| ||||||||||| || || |||| | | ||| Sbjct: 79 tacagaacagctagatacagaccagagttatctgaaggctcttctgaaaagaaagtggca 138 Query: 1302 tcaaaagaggatttgccatctatagaccttaaagggaattttgatctcaccgaagcatta 1361 |||||||| ||| | |||||||| ||| | ||||||| |||||||||||| |||||| | Sbjct: 139 tcaaaagaagatataccatctattgacttgaaagggagttttgatctcactgaagcactt 198 Query: 1362 cgtctccagttagaacttcaaaagcggctccatgaacaacttgaggtgcaaagaagtctg 1421 | |||||||| ||||||||||||||||| |||||||| |||||| | ||||||||| || Sbjct: 199 aggctccagttggaacttcaaaagcggcttcatgaacagcttgagatacaaagaagtttg 258 Query: 1422 cagctgagaatcgaggagcaagggaagtgcctt-cagattatgatcgagcagcaatgca 1479 ||||| ||||||||||| ||||||||||| ||| ||||| ||| | |||||||| |||| Sbjct: 259 cagctaagaatcgaggaacaagggaagtgtcttccagatgatgctagagcagcagtgca 317 Score = 42.1 bits (21), Expect = 7.6 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 1547 cccagaatcttctaccgtgaaggatg-ttccaaataacagtcaaaatgg 1594 |||||||||||||||||| ||||| | ||||| | ||| |||||||||| Sbjct: 394 cccagaatcttctaccgtcaaggaagtttccagaaaaccgtcaaaatgg 442
>ref|NM_001066050.1| Oryza sativa (japonica cultivar-group) Os07g0438800 (Os07g0438800) mRNA, complete cds Length = 1086 Score = 228 bits (115), Expect = 6e-56 Identities = 175/195 (89%) Strand = Plus / Plus Query: 1086 aagacacgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctg 1145 |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 736 aagacacgaatgagatggactcctgaacttcatgagcgctttgtagatgctgtcaatcta 795 Query: 1146 cttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataat 1205 |||||||||||||||||||||||||| || || ||| | ||| ||||||||||||| ||| Sbjct: 796 cttggtggcagtgaaaaagctactcccaagggtgtgttaaagctaatgaaggcagacaat 855 Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaactgcccgatatagacca 1265 ||||||||||||||||| |||||||| |||||||| |||||||| || ||||| |||||| Sbjct: 856 ttgaccatttatcatgttaaaagtcaccttcagaaatacagaacagctcgatacagacca 915 Query: 1266 gaattatctgaaggt 1280 ||||| ||||||||| Sbjct: 916 gaattgtctgaaggt 930 Score = 178 bits (90), Expect = 5e-41 Identities = 510/650 (78%), Gaps = 15/650 (2%) Strand = Plus / Plus Query: 327 atggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtgccatca 386 |||||||| |||| |||||| | | |||||| |||||| || || || ||||||||||| Sbjct: 1 atggagagaataagcaccaatcagctctacaattctggaattccggtgactgtgccatcg 60 Query: 387 cctctgccttc------agccgccatggatgaaagctttcccaggctgccagatgcgcag 440 ||||||||| | ||| || ||||||||| | |||||||| | ||||||| |||| Sbjct: 61 cctctgcctgctataccagctaccctggatgaaaacattcccaggattccagatgggcag 120 Query: 441 aatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaa------gt 494 ||||||| || |||||||||| ||||||| |||||| | || |||||||| | || Sbjct: 121 aatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaatcagagt 180 Query: 495 gctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggccccttgcgt 554 ||||||||||| |||||| ||||| ||||||| |||||||| || || ||||| Sbjct: 181 actgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcctctgcgt 240 Query: 555 tcgcccccggctgtaaggttctcttcagttccgaaccccgagcagtatgccggtgccaat 614 ||| ||| ||| ||||||||||||||||| | | | ||||| ||| | ||||||| Sbjct: 241 tcgtcccaggcgataaggttctcttcagtttcaagcaatgagcaatatacaaatgccaat 300 Query: 615 ccttacatttctcagacgccaagcactggaagttcttcagcgatgatttatggatcacac 674 ||||||| |||||| |||| || | ||| ||||||||| || | | |||||||||||| Sbjct: 301 ccttacaattctcaaccgccgagtagtgggagttcttcaacgctcaattatggatcacaa 360 Query: 675 catgaaggctttgaacctacttttaatggttttccaagagatgttggaccaacgtggtgc 734 ||| ||||||||||||| | || | || |||||||||||||| ||| || |||||||| Sbjct: 361 tatggaggctttgaaccttccttgactgattttccaagagatgctgggccgacgtggtgt 420 Query: 735 cctgatccagttgagagcatgcttgaattctccgatgacgtccctgttggaaacaatttg 794 |||||||||||||| || |||||| || | ||||| ||||||| ||| ||||||||| Sbjct: 421 cctgatccagttgatggcttgcttggatatacagatgatgtccctgctgggaacaatttg 480 Query: 795 actggcatcagtcctattgcagctacagatgagctcgctaagcagactgaatggtggacg 854 |||| | |||| ||||||||||| ||||| || || ||||| | ||||||||||| Sbjct: 481 actgaaaacagttctattgcagctggtgatgaacttgccaagcaaagtgaatggtggaat 540 Query: 855 gattttatgaacgatgactggaaggacattgctgacaacgtaggtggtgcgaaaactcaa 914 ||||||||||| |||||||||| || || ||| ||| || | || | |||||||| Sbjct: 541 gattttatgaattatgactggaaagatat---tgataacacagcttgtactgaaactcaa 597 Query: 915 ccacaggctggaccggctgtgcaaccatcgatttcagttcaccaatcagc 964 ||||||| |||||| |||| |||| |||| | |||||||||||||||| Sbjct: 598 ccacaggttggaccagctgcgcaatcatctgtcgcagttcaccaatcagc 647
>gb|AY224478.1| Oryza sativa (japonica cultivar-group) isolate 29112 phosphate starvation response regulator-like protein mRNA, complete cds Length = 1086 Score = 228 bits (115), Expect = 6e-56 Identities = 175/195 (89%) Strand = Plus / Plus Query: 1086 aagacacgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctg 1145 |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 736 aagacacgaatgagatggactcctgaacttcatgagcgctttgtagatgctgtcaatcta 795 Query: 1146 cttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataat 1205 |||||||||||||||||||||||||| || || ||| | ||| ||||||||||||| ||| Sbjct: 796 cttggtggcagtgaaaaagctactcccaagggtgtgttaaagctaatgaaggcagacaat 855 Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaactgcccgatatagacca 1265 ||||||||||||||||| |||||||| |||||||| |||||||| || ||||| |||||| Sbjct: 856 ttgaccatttatcatgttaaaagtcaccttcagaaatacagaacagctcgatacagacca 915 Query: 1266 gaattatctgaaggt 1280 ||||| ||||||||| Sbjct: 916 gaattgtctgaaggt 930 Score = 178 bits (90), Expect = 5e-41 Identities = 510/650 (78%), Gaps = 15/650 (2%) Strand = Plus / Plus Query: 327 atggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtgccatca 386 |||||||| |||| |||||| | | |||||| |||||| || || || ||||||||||| Sbjct: 1 atggagagaataagcaccaatcagctctacaattctggaattccggtgactgtgccatcg 60 Query: 387 cctctgccttc------agccgccatggatgaaagctttcccaggctgccagatgcgcag 440 ||||||||| | ||| || ||||||||| | |||||||| | ||||||| |||| Sbjct: 61 cctctgcctgctataccagctaccctggatgaaaacattcccaggattccagatgggcag 120 Query: 441 aatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaa------gt 494 ||||||| || |||||||||| ||||||| |||||| | || |||||||| | || Sbjct: 121 aatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaatcagagt 180 Query: 495 gctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggccccttgcgt 554 ||||||||||| |||||| ||||| ||||||| |||||||| || || ||||| Sbjct: 181 actgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcctctgcgt 240 Query: 555 tcgcccccggctgtaaggttctcttcagttccgaaccccgagcagtatgccggtgccaat 614 ||| ||| ||| ||||||||||||||||| | | | ||||| ||| | ||||||| Sbjct: 241 tcgtcccaggcgataaggttctcttcagtttcaagcaatgagcaatatacaaatgccaat 300 Query: 615 ccttacatttctcagacgccaagcactggaagttcttcagcgatgatttatggatcacac 674 ||||||| |||||| |||| || | ||| ||||||||| || | | |||||||||||| Sbjct: 301 ccttacaattctcaaccgccgagtagtgggagttcttcaacgctcaattatggatcacaa 360 Query: 675 catgaaggctttgaacctacttttaatggttttccaagagatgttggaccaacgtggtgc 734 ||| ||||||||||||| | || | || |||||||||||||| ||| || |||||||| Sbjct: 361 tatggaggctttgaaccttccttgactgattttccaagagatgctgggccgacgtggtgt 420 Query: 735 cctgatccagttgagagcatgcttgaattctccgatgacgtccctgttggaaacaatttg 794 |||||||||||||| || |||||| || | ||||| ||||||| ||| ||||||||| Sbjct: 421 cctgatccagttgatggcttgcttggatatacagatgatgtccctgctgggaacaatttg 480 Query: 795 actggcatcagtcctattgcagctacagatgagctcgctaagcagactgaatggtggacg 854 |||| | |||| ||||||||||| ||||| || || ||||| | ||||||||||| Sbjct: 481 actgaaaacagttctattgcagctggtgatgaacttgccaagcaaagtgaatggtggaat 540 Query: 855 gattttatgaacgatgactggaaggacattgctgacaacgtaggtggtgcgaaaactcaa 914 ||||||||||| |||||||||| || || ||| ||| || | || | |||||||| Sbjct: 541 gattttatgaattatgactggaaagatat---tgataacacagcttgtactgaaactcaa 597 Query: 915 ccacaggctggaccggctgtgcaaccatcgatttcagttcaccaatcagc 964 ||||||| |||||| |||| |||| |||| | |||||||||||||||| Sbjct: 598 ccacaggttggaccagctgcgcaatcatctgtcgcagttcaccaatcagc 647
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 180 bits (91), Expect = 1e-41 Identities = 449/569 (78%), Gaps = 12/569 (2%) Strand = Plus / Plus Query: 321 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 380 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 14700991 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 14701050 Query: 381 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 434 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 14701051 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 14701110 Query: 435 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaa-- 492 | ||||||||||| || |||||||||| ||||||| |||||| | || |||||||| | Sbjct: 14701111 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 14701170 Query: 493 ----gtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 548 || ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 14701171 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 14701230 Query: 549 ttgcgttcgcccccggctgtaaggttctcttcagttccgaaccccgagcagtatgccggt 608 |||||||| ||| ||| ||||||||||||||||| | | | ||||| ||| | | Sbjct: 14701231 ctgcgttcgtcccaggcgataaggttctcttcagtttcaagcaatgagcaatatacaaat 14701290 Query: 609 gccaatccttacatttctcagacgccaagcactggaagttcttcagcgatgatttatgga 668 ||||||||||||| |||||| |||| || | ||| ||||||||| || | | ||||||| Sbjct: 14701291 gccaatccttacaattctcaaccgccgagtagtgggagttcttcaacgctcaattatgga 14701350 Query: 669 tcacaccatgaaggctttgaacctacttttaatggttttccaagagatgttggaccaacg 728 ||||| ||| ||||||||||||| | || | || |||||||||||||| ||| || ||| Sbjct: 14701351 tcacaatatggaggctttgaaccttccttgactgattttccaagagatgctgggccgacg 14701410 Query: 729 tggtgccctgatccagttgagagcatgcttgaattctccgatgacgtccctgttggaaac 788 ||||| |||||||||||||| || |||||| || | ||||| ||||||| ||| ||| Sbjct: 14701411 tggtgtcctgatccagttgatggcttgcttggatatacagatgatgtccctgctgggaac 14701470 Query: 789 aatttgactggcatcagtcctattgcagctacagatgagctcgctaagcagactgaatgg 848 |||||||||| | |||| ||||||||||| ||||| || || ||||| | ||||||| Sbjct: 14701471 aatttgactgaaaacagttctattgcagctggtgatgaacttgccaagcaaagtgaatgg 14701530 Query: 849 tggacggattttatgaacgatgactggaa 877 |||| ||||||||||| |||||||||| Sbjct: 14701531 tggaatgattttatgaattatgactggaa 14701559 Score = 172 bits (87), Expect = 3e-39 Identities = 156/179 (87%) Strand = Plus / Plus Query: 1410 caaagaagtctgcagctgagaatcgaggagcaagggaagtgccttcagattatgatcgag 1469 ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 14705017 caaagaagtttgcagctgagaattgaggagcaagggaagtgccttcagatgatgctcgag 14705076 Query: 1470 cagcaatgcaatcctgctgcagacaaggcgctggatgcttcaacgtcggcagaaggatca 1529 ||||| |||| |||| ||||||||||| ||||||||||||| || ||||||||| || Sbjct: 14705077 cagcagtgcatacctgggacagacaaggcggtggatgcttcaacctcagcagaaggaaca 14705136 Query: 1530 aagttaccttctgaccccccagaatcttctaccgtgaaggatgttccaaataacagtca 1588 ||| | ||||||| | |||||||||||| ||||||||||||||||| | |||||||| Sbjct: 14705137 aagccatcttctgatcttccagaatcttctgccgtgaaggatgttccagagaacagtca 14705195 Score = 103 bits (52), Expect = 2e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 1086 aagacacgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctg 1145 |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 14702945 aagacacgaatgagatggactcctgaacttcatgagcgctttgtagatgctgtcaatcta 14703004 Query: 1146 cttggtggcagtgaaa 1161 |||||||||||||||| Sbjct: 14703005 cttggtggcagtgaaa 14703020 Score = 81.8 bits (41), Expect = 9e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1162 aagctactccaaaaggagtgctgaagttaatgaaggcagataatttgaccatttatcatg 1221 |||||||||| || || ||| | ||| ||||||||||||| ||||||||||||||||||| Sbjct: 14703102 aagctactcccaagggtgtgttaaagctaatgaaggcagacaatttgaccatttatcatg 14703161 Query: 1222 taaaaagtcatcttcag 1238 | |||||||| |||||| Sbjct: 14703162 ttaaaagtcaccttcag 14703178 Score = 81.8 bits (41), Expect = 9e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 1336 ggaattttgatctcaccgaagcattacgtctccagttagaacttcaaaagcggctccatg 1395 |||| ||||||||||| || ||||| ||||||||||||||||| |||||| |||| |||| Sbjct: 14704119 ggaactttgatctcactgaggcattgcgtctccagttagaactccaaaagaggcttcatg 14704178 Query: 1396 aacaacttgaggt 1408 |||| |||||||| Sbjct: 14704179 aacagcttgaggt 14704191 Score = 61.9 bits (31), Expect = 8e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 1838 cagaaggcagcgcaagcaaattcgcactgatgtactgttt-tgagggggtttgacttct 1895 ||||||||||| |||||||||| ||||||||||||| ||| | ||| |||||||||||| Sbjct: 14705574 cagaaggcagcacaagcaaatttgcactgatgtactctttgtcaggtggtttgacttct 14705632 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 1434 gaggagcaagggaagtgccttcagat 1459 |||||||||||||||||||||||||| Sbjct: 14706178 gaggagcaagggaagtgccttcagat 14706203 Score = 50.1 bits (25), Expect = 0.031 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1236 cagaagtacagaactgcccgatatagaccagaattatctgaaggt 1280 ||||| |||||||| || ||||| ||||||||||| ||||||||| Sbjct: 14703260 cagaaatacagaacagctcgatacagaccagaattgtctgaaggt 14703304 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1838 cagaaggcagcgcaagcaaattcgcactgatgtact 1873 ||||| ||||| |||||||||| ||||||||||||| Sbjct: 14716243 cagaacgcagcacaagcaaatttgcactgatgtact 14716278
>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0443H10 Length = 144695 Score = 180 bits (91), Expect = 1e-41 Identities = 449/569 (78%), Gaps = 12/569 (2%) Strand = Plus / Plus Query: 321 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 380 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 25758 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 25817 Query: 381 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 434 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 25818 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 25877 Query: 435 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaa-- 492 | ||||||||||| || |||||||||| ||||||| |||||| | || |||||||| | Sbjct: 25878 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 25937 Query: 493 ----gtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 548 || ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 25938 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 25997 Query: 549 ttgcgttcgcccccggctgtaaggttctcttcagttccgaaccccgagcagtatgccggt 608 |||||||| ||| ||| ||||||||||||||||| | | | ||||| ||| | | Sbjct: 25998 ctgcgttcgtcccaggcgataaggttctcttcagtttcaagcaatgagcaatatacaaat 26057 Query: 609 gccaatccttacatttctcagacgccaagcactggaagttcttcagcgatgatttatgga 668 ||||||||||||| |||||| |||| || | ||| ||||||||| || | | ||||||| Sbjct: 26058 gccaatccttacaattctcaaccgccgagtagtgggagttcttcaacgctcaattatgga 26117 Query: 669 tcacaccatgaaggctttgaacctacttttaatggttttccaagagatgttggaccaacg 728 ||||| ||| ||||||||||||| | || | || |||||||||||||| ||| || ||| Sbjct: 26118 tcacaatatggaggctttgaaccttccttgactgattttccaagagatgctgggccgacg 26177 Query: 729 tggtgccctgatccagttgagagcatgcttgaattctccgatgacgtccctgttggaaac 788 ||||| |||||||||||||| || |||||| || | ||||| ||||||| ||| ||| Sbjct: 26178 tggtgtcctgatccagttgatggcttgcttggatatacagatgatgtccctgctgggaac 26237 Query: 789 aatttgactggcatcagtcctattgcagctacagatgagctcgctaagcagactgaatgg 848 |||||||||| | |||| ||||||||||| ||||| || || ||||| | ||||||| Sbjct: 26238 aatttgactgaaaacagttctattgcagctggtgatgaacttgccaagcaaagtgaatgg 26297 Query: 849 tggacggattttatgaacgatgactggaa 877 |||| ||||||||||| |||||||||| Sbjct: 26298 tggaatgattttatgaattatgactggaa 26326 Score = 172 bits (87), Expect = 3e-39 Identities = 156/179 (87%) Strand = Plus / Plus Query: 1410 caaagaagtctgcagctgagaatcgaggagcaagggaagtgccttcagattatgatcgag 1469 ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 29784 caaagaagtttgcagctgagaattgaggagcaagggaagtgccttcagatgatgctcgag 29843 Query: 1470 cagcaatgcaatcctgctgcagacaaggcgctggatgcttcaacgtcggcagaaggatca 1529 ||||| |||| |||| ||||||||||| ||||||||||||| || ||||||||| || Sbjct: 29844 cagcagtgcatacctgggacagacaaggcggtggatgcttcaacctcagcagaaggaaca 29903 Query: 1530 aagttaccttctgaccccccagaatcttctaccgtgaaggatgttccaaataacagtca 1588 ||| | ||||||| | |||||||||||| ||||||||||||||||| | |||||||| Sbjct: 29904 aagccatcttctgatcttccagaatcttctgccgtgaaggatgttccagagaacagtca 29962 Score = 103 bits (52), Expect = 2e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 1086 aagacacgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctg 1145 |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 27712 aagacacgaatgagatggactcctgaacttcatgagcgctttgtagatgctgtcaatcta 27771 Query: 1146 cttggtggcagtgaaa 1161 |||||||||||||||| Sbjct: 27772 cttggtggcagtgaaa 27787 Score = 81.8 bits (41), Expect = 9e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1162 aagctactccaaaaggagtgctgaagttaatgaaggcagataatttgaccatttatcatg 1221 |||||||||| || || ||| | ||| ||||||||||||| ||||||||||||||||||| Sbjct: 27869 aagctactcccaagggtgtgttaaagctaatgaaggcagacaatttgaccatttatcatg 27928 Query: 1222 taaaaagtcatcttcag 1238 | |||||||| |||||| Sbjct: 27929 ttaaaagtcaccttcag 27945 Score = 81.8 bits (41), Expect = 9e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 1336 ggaattttgatctcaccgaagcattacgtctccagttagaacttcaaaagcggctccatg 1395 |||| ||||||||||| || ||||| ||||||||||||||||| |||||| |||| |||| Sbjct: 28886 ggaactttgatctcactgaggcattgcgtctccagttagaactccaaaagaggcttcatg 28945 Query: 1396 aacaacttgaggt 1408 |||| |||||||| Sbjct: 28946 aacagcttgaggt 28958 Score = 61.9 bits (31), Expect = 8e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 1838 cagaaggcagcgcaagcaaattcgcactgatgtactgttt-tgagggggtttgacttct 1895 ||||||||||| |||||||||| ||||||||||||| ||| | ||| |||||||||||| Sbjct: 30341 cagaaggcagcacaagcaaatttgcactgatgtactctttgtcaggtggtttgacttct 30399 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 1434 gaggagcaagggaagtgccttcagat 1459 |||||||||||||||||||||||||| Sbjct: 30945 gaggagcaagggaagtgccttcagat 30970 Score = 50.1 bits (25), Expect = 0.031 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1236 cagaagtacagaactgcccgatatagaccagaattatctgaaggt 1280 ||||| |||||||| || ||||| ||||||||||| ||||||||| Sbjct: 28027 cagaaatacagaacagctcgatacagaccagaattgtctgaaggt 28071 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1838 cagaaggcagcgcaagcaaattcgcactgatgtact 1873 ||||| ||||| |||||||||| ||||||||||||| Sbjct: 41010 cagaacgcagcacaagcaaatttgcactgatgtact 41045
>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0026I22 Length = 143302 Score = 180 bits (91), Expect = 1e-41 Identities = 449/569 (78%), Gaps = 12/569 (2%) Strand = Plus / Plus Query: 321 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 380 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 93989 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 94048 Query: 381 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 434 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 94049 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 94108 Query: 435 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaa-- 492 | ||||||||||| || |||||||||| ||||||| |||||| | || |||||||| | Sbjct: 94109 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 94168 Query: 493 ----gtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 548 || ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 94169 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 94228 Query: 549 ttgcgttcgcccccggctgtaaggttctcttcagttccgaaccccgagcagtatgccggt 608 |||||||| ||| ||| ||||||||||||||||| | | | ||||| ||| | | Sbjct: 94229 ctgcgttcgtcccaggcgataaggttctcttcagtttcaagcaatgagcaatatacaaat 94288 Query: 609 gccaatccttacatttctcagacgccaagcactggaagttcttcagcgatgatttatgga 668 ||||||||||||| |||||| |||| || | ||| ||||||||| || | | ||||||| Sbjct: 94289 gccaatccttacaattctcaaccgccgagtagtgggagttcttcaacgctcaattatgga 94348 Query: 669 tcacaccatgaaggctttgaacctacttttaatggttttccaagagatgttggaccaacg 728 ||||| ||| ||||||||||||| | || | || |||||||||||||| ||| || ||| Sbjct: 94349 tcacaatatggaggctttgaaccttccttgactgattttccaagagatgctgggccgacg 94408 Query: 729 tggtgccctgatccagttgagagcatgcttgaattctccgatgacgtccctgttggaaac 788 ||||| |||||||||||||| || |||||| || | ||||| ||||||| ||| ||| Sbjct: 94409 tggtgtcctgatccagttgatggcttgcttggatatacagatgatgtccctgctgggaac 94468 Query: 789 aatttgactggcatcagtcctattgcagctacagatgagctcgctaagcagactgaatgg 848 |||||||||| | |||| ||||||||||| ||||| || || ||||| | ||||||| Sbjct: 94469 aatttgactgaaaacagttctattgcagctggtgatgaacttgccaagcaaagtgaatgg 94528 Query: 849 tggacggattttatgaacgatgactggaa 877 |||| ||||||||||| |||||||||| Sbjct: 94529 tggaatgattttatgaattatgactggaa 94557 Score = 172 bits (87), Expect = 3e-39 Identities = 156/179 (87%) Strand = Plus / Plus Query: 1410 caaagaagtctgcagctgagaatcgaggagcaagggaagtgccttcagattatgatcgag 1469 ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||| Sbjct: 98015 caaagaagtttgcagctgagaattgaggagcaagggaagtgccttcagatgatgctcgag 98074 Query: 1470 cagcaatgcaatcctgctgcagacaaggcgctggatgcttcaacgtcggcagaaggatca 1529 ||||| |||| |||| ||||||||||| ||||||||||||| || ||||||||| || Sbjct: 98075 cagcagtgcatacctgggacagacaaggcggtggatgcttcaacctcagcagaaggaaca 98134 Query: 1530 aagttaccttctgaccccccagaatcttctaccgtgaaggatgttccaaataacagtca 1588 ||| | ||||||| | |||||||||||| ||||||||||||||||| | |||||||| Sbjct: 98135 aagccatcttctgatcttccagaatcttctgccgtgaaggatgttccagagaacagtca 98193 Score = 103 bits (52), Expect = 2e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 1086 aagacacgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctg 1145 |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 95943 aagacacgaatgagatggactcctgaacttcatgagcgctttgtagatgctgtcaatcta 96002 Query: 1146 cttggtggcagtgaaa 1161 |||||||||||||||| Sbjct: 96003 cttggtggcagtgaaa 96018 Score = 81.8 bits (41), Expect = 9e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 1162 aagctactccaaaaggagtgctgaagttaatgaaggcagataatttgaccatttatcatg 1221 |||||||||| || || ||| | ||| ||||||||||||| ||||||||||||||||||| Sbjct: 96100 aagctactcccaagggtgtgttaaagctaatgaaggcagacaatttgaccatttatcatg 96159 Query: 1222 taaaaagtcatcttcag 1238 | |||||||| |||||| Sbjct: 96160 ttaaaagtcaccttcag 96176 Score = 81.8 bits (41), Expect = 9e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 1336 ggaattttgatctcaccgaagcattacgtctccagttagaacttcaaaagcggctccatg 1395 |||| ||||||||||| || ||||| ||||||||||||||||| |||||| |||| |||| Sbjct: 97117 ggaactttgatctcactgaggcattgcgtctccagttagaactccaaaagaggcttcatg 97176 Query: 1396 aacaacttgaggt 1408 |||| |||||||| Sbjct: 97177 aacagcttgaggt 97189 Score = 61.9 bits (31), Expect = 8e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 1838 cagaaggcagcgcaagcaaattcgcactgatgtactgttt-tgagggggtttgacttct 1895 ||||||||||| |||||||||| ||||||||||||| ||| | ||| |||||||||||| Sbjct: 98572 cagaaggcagcacaagcaaatttgcactgatgtactctttgtcaggtggtttgacttct 98630 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Plus Query: 1434 gaggagcaagggaagtgccttcagat 1459 |||||||||||||||||||||||||| Sbjct: 99176 gaggagcaagggaagtgccttcagat 99201 Score = 50.1 bits (25), Expect = 0.031 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1236 cagaagtacagaactgcccgatatagaccagaattatctgaaggt 1280 ||||| |||||||| || ||||| ||||||||||| ||||||||| Sbjct: 96258 cagaaatacagaacagctcgatacagaccagaattgtctgaaggt 96302 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1838 cagaaggcagcgcaagcaaattcgcactgatgtact 1873 ||||| ||||| |||||||||| ||||||||||||| Sbjct: 109241 cagaacgcagcacaagcaaatttgcactgatgtact 109276
>gb|AY106726.1| Zea mays PCO106271 mRNA sequence Length = 943 Score = 107 bits (54), Expect = 2e-19 Identities = 201/251 (80%) Strand = Plus / Plus Query: 633 ccaagcactggaagttcttcagcgatgatttatggatcacaccatgaaggctttgaacct 692 |||||||||| |||||| ||| || ||| |||||| ||||| ||| |||||||||||| Sbjct: 566 ccaagcactgcaagttcctcaacgctgaattatgggtcacaatatggaggctttgaacca 625 Query: 693 acttttaatggttttccaagagatgttggaccaacgtggtgccctgatccagttgagagc 752 | | | | ||| |||||||| ||| |||||| |||||||| || |||||||||| Sbjct: 626 tccataaccgatttcccaagagacattgaaccaacttggtgccccgannnagttgagagc 685 Query: 753 atgcttgaattctccgatgacgtccctgttggaaacaatttgactggcatcagtcctatt 812 || |||| || ||| | ||| ||||||| ||| || ||||||||||| | || | ||||| Sbjct: 686 attcttggatactctggtgatgtccctgctgggaataatttgactgggaccacttctatt 745 Query: 813 gcagctacagatgagctcgctaagcagactgaatggtggacggattttatgaacgatgac 872 | |||| ||||||| || ||||||| |||||||||||||| || |||||||| || || Sbjct: 746 ggagcttcagatgatcttactaagcaaactgaatggtggacagagtttatgaatgaggat 805 Query: 873 tggaaggacat 883 ||||||||||| Sbjct: 806 tggaaggacat 816 Score = 61.9 bits (31), Expect = 8e-06 Identities = 139/175 (79%) Strand = Plus / Plus Query: 406 tggatgaaagctttcccaggctgccagatgcgcagaatgttctgctggagagagaactga 465 ||||||| ||||| || ||||| || ||||| |||| |||| || ||||||||||| ||| Sbjct: 339 tggatgagagcttcccgaggcttcccgatgcacagagtgttttgatggagagagaattga 398 Query: 466 gaagaacacctctcccgcctcatcaaagtgctgttgctcctaccggtgggcagtttcacc 525 | || || || || || ||||| || | |||||||||||| | |||| | ||||||| Sbjct: 399 ggagcactccactaccacctcaccagacaactgttgctcctatccgtggtctgtttcact 458 Query: 526 ccagtactgggtctgtcggccccttgcgttcgcccccggctgtaaggttctcttc 580 ||| |||||| ||||| || || ||| | || || ||| |||||||||||||||| Sbjct: 459 ccaatactggatctgttggtcctttgtgctcacctccgtctgtaaggttctcttc 513
>gb|DQ100348.1| Zea mays carotenoid cleavage dioxygenase 1 (CCD1) gene, partial cds Length = 6188 Score = 105 bits (53), Expect = 6e-19 Identities = 159/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 1410 caaagaagtctgcagctgagaatcgaggagcaagggaagtgccttcagattatgatcgag 1469 ||||||||| ||||||| ||||||||||| ||||||||||| |||||||| ||| | ||| Sbjct: 2348 caaagaagtttgcagctaagaatcgaggaacaagggaagtgtcttcagatgatgctagag 2289 Query: 1470 cagcaatgcaatcctgctgcagacaaggcgctggatgcttcaacgtcggcagaaggatca 1529 ||||| |||| || | ||||| ||||||| |||||||||||| | ||||| | || Sbjct: 2288 cagcagtgcatacccggggcagaaaaggcgcaggatgcttcaaccgctgcagatgaattg 2229 Query: 1530 aagttaccttctgacccccca-gaatcttctaccgtgaaggatgttccaaataacagtca 1588 | || ||||||||| ||| |||||||||||||| ||||| |||||| | |||||||| Sbjct: 2228 aggtcaccttctgagattccaggaatcttctaccgtcaaggaagttccagaaaacagtca 2169 Query: 1589 aaatggaacaacc 1601 ||||||| ||||| Sbjct: 2168 aaatggatcaacc 2156
>ref|NM_001056541.1| Oryza sativa (japonica cultivar-group) Os03g0329900 (Os03g0329900) mRNA, complete cds Length = 1989 Score = 79.8 bits (40), Expect = 3e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 1145 gcttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataa 1204 ||||||||| ||||||||||||||||||||||| ||||| ||| | ||||| | ||| Sbjct: 1055 gcttggtggtagtgaaaaagctactccaaaaggtgtgctcaagcttatgaaagttgatgg 1114 Query: 1205 tttgaccatttatcatgtaaaaagtcatcttcagaagtac 1244 |||||| || |||||||| || |||||||| ||||||||| Sbjct: 1115 tttgacaatctatcatgttaagagtcatctgcagaagtac 1154
>dbj|AK109510.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-D09, full insert sequence Length = 1750 Score = 79.8 bits (40), Expect = 3e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 1145 gcttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataa 1204 ||||||||| ||||||||||||||||||||||| ||||| ||| | ||||| | ||| Sbjct: 1034 gcttggtggtagtgaaaaagctactccaaaaggtgtgctcaagcttatgaaagttgatgg 1093 Query: 1205 tttgaccatttatcatgtaaaaagtcatcttcagaagtac 1244 |||||| || |||||||| || |||||||| ||||||||| Sbjct: 1094 tttgacaatctatcatgttaagagtcatctgcagaagtac 1133
>dbj|AK063486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-C05, full insert sequence Length = 2003 Score = 79.8 bits (40), Expect = 3e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 1145 gcttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataa 1204 ||||||||| ||||||||||||||||||||||| ||||| ||| | ||||| | ||| Sbjct: 1056 gcttggtggtagtgaaaaagctactccaaaaggtgtgctcaagcttatgaaagttgatgg 1115 Query: 1205 tttgaccatttatcatgtaaaaagtcatcttcagaagtac 1244 |||||| || |||||||| || |||||||| ||||||||| Sbjct: 1116 tttgacaatctatcatgttaagagtcatctgcagaagtac 1155
>gb|AY107734.1| Zea mays PCO065209 mRNA sequence Length = 851 Score = 65.9 bits (33), Expect = 5e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 1095 atgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtggc 1154 ||||| ||||| || ||||| ||||| ||||||| || ||||| |||| |||||| || Sbjct: 95 atgagatggaccccagaactccatgaatgttttgtagatgctgtaaatcagcttggcggt 154 Query: 1155 agtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataatttgaccatt 1214 || |||||||||||||| || || ||||| ||| | ||||| | ||| |||||| || Sbjct: 155 agcgaaaaagctactcctaagggtgtgctaaagcttatgaaagttgatggtttgactata 214 Query: 1215 tatcatgtaaaaagtcatcttcagaagtacagaactgcccgatatagaccaga 1267 |||||||| ||||| || || ||||||||| | || ||||| |||| |||||| Sbjct: 215 tatcatgtcaaaagccacctgcagaagtaccgcacagcccgctataaaccaga 267
>emb|CT830069.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA051M08, full insert sequence Length = 1505 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1383 aagcggctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaa 1442 ||||| |||||||||||||||||||||||||| |||||||||||||| || | ||| Sbjct: 822 aagcgactccatgaacaacttgaggtgcaaaggcagctgcagctgagaattgaagcacaa 881 Query: 1443 gggaagt 1449 ||||||| Sbjct: 882 gggaagt 888
>ref|NM_001062445.1| Oryza sativa (japonica cultivar-group) Os05g0491500 (Os05g0491500) mRNA, complete cds Length = 1535 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1383 aagcggctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaa 1442 ||||| |||||||||||||||||||||||||| |||||||||||||| || | ||| Sbjct: 827 aagcgactccatgaacaacttgaggtgcaaaggcagctgcagctgagaattgaagcacaa 886 Query: 1443 gggaagt 1449 ||||||| Sbjct: 887 gggaagt 893
>gb|AF219972.1|AF219972 Mesembryanthemum crystallinum CDPK substrate protein 1 (csp1) mRNA, complete cds Length = 2101 Score = 61.9 bits (31), Expect = 8e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 1092 cgcatgaggtggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggt 1151 |||||| | ||||| || ||||||||||| |||||||| |||||||||| |||||| Sbjct: 1174 cgcatgcgttggacaccggaacttcatgaagcctttgtggatgctgtcaatcagcttggc 1233 Query: 1152 ggcagtgaaaaagctactccaaa 1174 || ||||||| |||||||||||| Sbjct: 1234 ggtagtgaaagagctactccaaa 1256
>dbj|AK069306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H08, full insert sequence Length = 1823 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1383 aagcggctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaa 1442 ||||| |||||||||||||||||||||||||| |||||||||||||| || | ||| Sbjct: 758 aagcgactccatgaacaacttgaggtgcaaaggcagctgcagctgagaattgaagcacaa 817 Query: 1443 gggaagt 1449 ||||||| Sbjct: 818 gggaagt 824
>dbj|AK061987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B07, full insert sequence Length = 1535 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1383 aagcggctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaa 1442 ||||| |||||||||||||||||||||||||| |||||||||||||| || | ||| Sbjct: 827 aagcgactccatgaacaacttgaggtgcaaaggcagctgcagctgagaattgaagcacaa 886 Query: 1443 gggaagt 1449 ||||||| Sbjct: 887 gggaagt 893
>gb|AY625680.1| Triticum aestivum MYB transcription factor (MYB80) mRNA, complete cds Length = 1199 Score = 58.0 bits (29), Expect = 1e-04 Identities = 64/73 (87%), Gaps = 2/73 (2%) Strand = Plus / Plus Query: 1378 ttcaaaagcggctccatgaacaacttgaggtgc-aaagaagtctgcagctgagaatcgag 1436 |||| |||||||||||||||||||| ||||| | |||| ||| |||||||||||||||| Sbjct: 494 ttcagaagcggctccatgaacaactcgaggttcaaaagcagt-tgcagctgagaatcgaa 552 Query: 1437 gagcaagggaagt 1449 | |||||||||| Sbjct: 553 gcacaagggaagt 565
>ref|NM_001055028.1| Oryza sativa (japonica cultivar-group) Os02g0814500 (Os02g0814500) mRNA, complete cds Length = 1056 Score = 56.0 bits (28), Expect = 5e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtggcagtgaa 1160 ||||| ||||| || |||||||| ||||| || ||||| || ||||||||| |||||| Sbjct: 553 tggacacctgagctccatgagcggtttgttgatgctgttaacaagcttggtggaagtgaa 612 Query: 1161 aaagctactccaaaag 1176 ||||| |||||||||| Sbjct: 613 aaagcaactccaaaag 628
>ref|NM_127599.2| Arabidopsis thaliana DNA binding / transcription factor (AT2G20400) mRNA, complete cds Length = 1737 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtggcagtgaa 1160 ||||| ||||||||||||||| |||||| |||||||| || | ||| ||||||||| | Sbjct: 897 tggacgcctgaacttcatgaggtttttgttgacgctgttaaccagctcggtggcagtaat 956 Query: 1161 aaagctactccaaaaggagtgctgaag 1187 |||| ||||| ||||| || |||||| Sbjct: 957 gaagcaactcctaaaggtgtcctgaag 983
>gb|BT006119.1| Arabidopsis thaliana clone U50843 unknown protein (At2g20400) mRNA, complete cds Length = 1225 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtggcagtgaa 1160 ||||| ||||||||||||||| |||||| |||||||| || | ||| ||||||||| | Sbjct: 706 tggacgcctgaacttcatgaggtttttgttgacgctgttaaccagctcggtggcagtaat 765 Query: 1161 aaagctactccaaaaggagtgctgaag 1187 |||| ||||| ||||| || |||||| Sbjct: 766 gaagcaactcctaaaggtgtcctgaag 792
>dbj|AK118313.1| Arabidopsis thaliana At2g20400 mRNA for unknown protein, complete cds, clone: RAFL19-59-J02 Length = 1672 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtggcagtgaa 1160 ||||| ||||||||||||||| |||||| |||||||| || | ||| ||||||||| | Sbjct: 897 tggacgcctgaacttcatgaggtttttgttgacgctgttaaccagctcggtggcagtaat 956 Query: 1161 aaagctactccaaaaggagtgctgaag 1187 |||| ||||| ||||| || |||||| Sbjct: 957 gaagcaactcctaaaggtgtcctgaag 983
>emb|BX820306.1|CNS0A8K8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH20ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1527 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtggcagtgaa 1160 ||||| ||||||||||||||| |||||| |||||||| || | ||| ||||||||| | Sbjct: 883 tggacgcctgaacttcatgaggtttttgttgacgctgttaaccagctcggtggcagtaat 942 Query: 1161 aaagctactccaaaaggagtgctgaag 1187 |||| ||||| ||||| || |||||| Sbjct: 943 gaagcaactcctaaaggtgtcctgaag 969
>emb|BX819989.1|CNS0A8F4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS57ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1685 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtggcagtgaa 1160 ||||| ||||||||||||||| |||||| |||||||| || | ||| ||||||||| | Sbjct: 886 tggacgcctgaacttcatgaggtttttgttgacgctgttaaccagctcggtggcagtaat 945 Query: 1161 aaagctactccaaaaggagtgctgaag 1187 |||| ||||| ||||| || |||||| Sbjct: 946 gaagcaactcctaaaggtgtcctgaag 972
>dbj|AB017693.1| Nicotiana tabacum WERBP-1 mRNA, complete cds Length = 1120 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 1146 cttggtggcagtgaaaaagctactccaaaaggagtgctgaagttaatgaaggcagataat 1205 |||||||| ||||||| ||||||||| || || ||| ||||||||||||| | || | Sbjct: 308 cttggtggaagtgaaagagctactcccaagggtgtgttgaagttaatgaaagttgaaggt 367 Query: 1206 ttgaccatttatcatgtaaaaag 1228 |||||||| ||||| |||||||| Sbjct: 368 ttgaccatctatcacgtaaaaag 390 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1392 catgaacaacttgaggtgcaaagaagtctgcagctg 1427 ||||||||||||||| | ||||||| |||||||||| Sbjct: 554 catgaacaacttgagattcaaagaaatctgcagctg 589
>gb|AY019185.1| Oryza sativa microsatellite MRG1510 containing (AT)X28, genomic sequence Length = 256 Score = 52.0 bits (26), Expect = 0.008 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1434 gaggagcaagggaagtgccttcagat 1459 |||||||||||||||||||||||||| Sbjct: 228 gaggagcaagggaagtgccttcagat 203
>emb|CT836022.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN044E14, full insert sequence Length = 892 Score = 50.1 bits (25), Expect = 0.031 Identities = 25/25 (100%) Strand = Plus / Plus Query: 257 tctcgcgagcagagcaggggaggga 281 ||||||||||||||||||||||||| Sbjct: 470 tctcgcgagcagagcaggggaggga 494
>gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete sequence Length = 151417 Score = 50.1 bits (25), Expect = 0.031 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtgg 1153 |||||||| |||||||||||| |||||||| || ||||||| ||||||||| Sbjct: 134898 tggactccagaacttcatgaggcctttgtggaagcagtcaatcagcttggtgg 134950 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1353 gaagcattacgtctccagttagaacttcaaaagcggctccatgaacaacttgaggt 1408 |||||||| || || ||| | ||||| || |||||||| ||||||||||||||||| Sbjct: 136068 gaagcattgcggctgcagatggaactccagaagcggcttcatgaacaacttgaggt 136123
>gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete sequence Length = 132875 Score = 50.1 bits (25), Expect = 0.031 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtgg 1153 |||||||| |||||||||||| |||||||| || ||||||| ||||||||| Sbjct: 29617 tggactccagaacttcatgaggcctttgtggaagcagtcaatcagcttggtgg 29565 Score = 48.1 bits (24), Expect = 0.12 Identities = 48/56 (85%) Strand = Plus / Minus Query: 1353 gaagcattacgtctccagttagaacttcaaaagcggctccatgaacaacttgaggt 1408 |||||||| || || ||| | ||||| || |||||||| ||||||||||||||||| Sbjct: 28447 gaagcattgcggctgcagatggaactccagaagcggcttcatgaacaacttgaggt 28392
>gb|AC006569.5| Arabidopsis thaliana chromosome 2 clone F11A3 map mi148, complete sequence Length = 93868 Score = 50.1 bits (25), Expect = 0.031 Identities = 49/57 (85%) Strand = Plus / Minus Query: 1101 tggactcctgaacttcatgagcgttttgtggacgctgtcaatctgcttggtggcagt 1157 ||||| ||||||||||||||| |||||| |||||||| || | ||| ||||||||| Sbjct: 11329 tggacgcctgaacttcatgaggtttttgttgacgctgttaaccagctcggtggcagt 11273
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 50.1 bits (25), Expect = 0.031 Identities = 25/25 (100%) Strand = Plus / Plus Query: 257 tctcgcgagcagagcaggggaggga 281 ||||||||||||||||||||||||| Sbjct: 20248241 tctcgcgagcagagcaggggaggga 20248265
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 50.1 bits (25), Expect = 0.031 Identities = 25/25 (100%) Strand = Plus / Plus Query: 257 tctcgcgagcagagcaggggaggga 281 ||||||||||||||||||||||||| Sbjct: 114027 tctcgcgagcagagcaggggaggga 114051
>emb|CT830983.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA208P17, full insert sequence Length = 2444 Score = 48.1 bits (24), Expect = 0.12 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1389 ctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaagggaag 1448 ||||||||||| || ||| | || |||| |||||||||||| || |||||||| |||||| Sbjct: 1879 ctccatgaacagctagagattcagagaaatctgcagctgaggatagaggagcaggggaag 1938
>ref|NM_001060713.1| Oryza sativa (japonica cultivar-group) Os04g0665600 (Os04g0665600) mRNA, complete cds Length = 1956 Score = 48.1 bits (24), Expect = 0.12 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1389 ctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaagggaag 1448 ||||||||||| || ||| | || |||| |||||||||||| || |||||||| |||||| Sbjct: 1278 ctccatgaacagctagagattcagagaaatctgcagctgaggatagaggagcaggggaag 1337
>ref|NM_001058794.1| Oryza sativa (japonica cultivar-group) Os04g0218100 (Os04g0218100) mRNA, partial cds Length = 3508 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 257 tctcgcgagcagagcaggggaggg 280 |||||||||||||||||||||||| Sbjct: 388 tctcgcgagcagagcaggggaggg 411
>ref|NM_122784.4| Arabidopsis thaliana DNA binding / transcription factor (AT5G29000) mRNA, complete cds Length = 1541 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 857 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 900
>ref|NM_180759.2| Arabidopsis thaliana DNA binding / transcription factor (AT5G29000) mRNA, complete cds Length = 1446 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 762 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 805
>gb|AY045943.1| Arabidopsis thaliana unknown protein (At5g29000) mRNA, partial cds Length = 1270 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 728 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 771
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 257 tctcgcgagcagagcaggggaggg 280 |||||||||||||||||||||||| Sbjct: 7836715 tctcgcgagcagagcaggggaggg 7836738 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 257 tctcgcgagcagagcaggggaggg 280 |||||||||||||||||||||||| Sbjct: 7860337 tctcgcgagcagagcaggggaggg 7860314
>gb|AY085154.1| Arabidopsis thaliana clone 13378 mRNA, complete sequence Length = 1443 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 858 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 901
>emb|AL662948.4|OSJN00150 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060B20, complete sequence Length = 147254 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 257 tctcgcgagcagagcaggggaggg 280 |||||||||||||||||||||||| Sbjct: 42412 tctcgcgagcagagcaggggaggg 42435 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 257 tctcgcgagcagagcaggggaggg 280 |||||||||||||||||||||||| Sbjct: 66034 tctcgcgagcagagcaggggaggg 66011
>gb|BT002344.1| Arabidopsis thaliana clone C104936 unknown protein (At5g29000) mRNA, complete cds Length = 1273 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 811 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 854
>dbj|AK101951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I07, full insert sequence Length = 1959 Score = 48.1 bits (24), Expect = 0.12 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1389 ctccatgaacaacttgaggtgcaaagaagtctgcagctgagaatcgaggagcaagggaag 1448 ||||||||||| || ||| | || |||| |||||||||||| || |||||||| |||||| Sbjct: 1279 ctccatgaacagctagagattcagagaaatctgcagctgaggatagaggagcaggggaag 1338
>emb|BX831423.1|CNS0A0TE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 691 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 734
>emb|BX829796.1|CNS0A1F0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1334 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 738 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 781
>emb|BX830876.1|CNS0A0NM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS34ZF03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1364 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 763 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 806
>emb|BX830755.1|CNS0A0PP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaac 1249 ||||||||||||||||||||||| ||| | ||||| || ||||| Sbjct: 697 ttgaccatttatcatgtaaaaagccatttgcagaaatatagaac 740
>dbj|AK066074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057F06, full insert sequence Length = 3509 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 257 tctcgcgagcagagcaggggaggg 280 |||||||||||||||||||||||| Sbjct: 389 tctcgcgagcagagcaggggaggg 412
>ref|NM_001064580.1| Oryza sativa (japonica cultivar-group) Os06g0609500 (Os06g0609500) mRNA, complete cds Length = 1422 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1380 caaaagcggctccatgaacaacttgaggtgcaaag 1414 ||||||||||| ||||||||| | ||||||||||| Sbjct: 596 caaaagcggctacatgaacaattagaggtgcaaag 630
>ref|NM_001062486.1| Oryza sativa (japonica cultivar-group) Os05g0498700 (Os05g0498700) mRNA, complete cds Length = 1543 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 258 ctcgcgagcagagcaggggaggg 280 ||||||||||||||||||||||| Sbjct: 76 ctcgcgagcagagcaggggaggg 98
>ref|NM_111316.1| Arabidopsis thaliana transcription factor (AT3G04450) mRNA, complete cds Length = 1317 Score = 46.1 bits (23), Expect = 0.49 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaactgc 1252 |||||| |||||||||| ||||| ||| | ||||| ||||||||||| Sbjct: 832 ttgaccgtttatcatgtcaaaagccatttgcagaaatacagaactgc 878
>ref|XM_600341.2| PREDICTED: Bos taurus similar to small optic lobes (LOC522068), mRNA Length = 3204 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1056 ccctcaccctctgccagctccaa 1078 ||||||||||||||||||||||| Sbjct: 898 ccctcaccctctgccagctccaa 920
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 ctcgcgagcagagcaggggaggg 280 ||||||||||||||||||||||| Sbjct: 12524 ctcgcgagcagagcaggggaggg 12502
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 ctcgcgagcagagcaggggaggg 280 ||||||||||||||||||||||| Sbjct: 95641 ctcgcgagcagagcaggggaggg 95619
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 tctcgcgagcagagcaggggagg 279 ||||||||||||||||||||||| Sbjct: 4956468 tctcgcgagcagagcaggggagg 4956490 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 cgagcagagcaggggagggaa 282 ||||||||||||||||||||| Sbjct: 3221842 cgagcagagcaggggagggaa 3221822
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 ctcgcgagcagagcaggggaggg 280 ||||||||||||||||||||||| Sbjct: 24409851 ctcgcgagcagagcaggggaggg 24409829 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1383 aagcggctccatgaacaacttgaggt 1408 ||||| |||||||||||||||||||| Sbjct: 24009802 aagcgactccatgaacaacttgaggt 24009777
>gb|BT005352.1| Arabidopsis thaliana At3g04445 mRNA, complete cds Length = 1209 Score = 46.1 bits (23), Expect = 0.49 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaactgc 1252 |||||| |||||||||| ||||| ||| | ||||| ||||||||||| Sbjct: 712 ttgaccgtttatcatgtcaaaagccatttgcagaaatacagaactgc 758
>dbj|AK118630.1| Arabidopsis thaliana At3g04450 mRNA for putative transfactor, complete cds, clone: RAFL19-89-P11 Length = 1824 Score = 46.1 bits (23), Expect = 0.49 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaagtcatcttcagaagtacagaactgc 1252 |||||| |||||||||| ||||| ||| | ||||| ||||||||||| Sbjct: 1248 ttgaccgtttatcatgtcaaaagccatttgcagaaatacagaactgc 1294
>dbj|AK071731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114F03, full insert sequence Length = 1423 Score = 46.1 bits (23), Expect = 0.49 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1380 caaaagcggctccatgaacaacttgaggtgcaaag 1414 ||||||||||| ||||||||| | ||||||||||| Sbjct: 597 caaaagcggctacatgaacaattagaggtgcaaag 631
>dbj|AK065975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D18, full insert sequence Length = 1546 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 258 ctcgcgagcagagcaggggaggg 280 ||||||||||||||||||||||| Sbjct: 79 ctcgcgagcagagcaggggaggg 101
>gb|AC018632.1|AC018632 Genomic Sequence For Arabidopsis thaliana Clone F3F24, Chromosome V, complete sequence Length = 151828 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1206 ttgaccatttatcatgtaaaaag 1228 ||||||||||||||||||||||| Sbjct: 56319 ttgaccatttatcatgtaaaaag 56341
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Minus Query: 257 tctcgcgagcagagcaggggagg 279 ||||||||||||||||||||||| Sbjct: 3491 tctcgcgagcagagcaggggagg 3469
>gb|AC186761.1| Pongo pygmaeus abelii chromosome UNK clone CH276-23H12, complete sequence Length = 194996 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1673 catgaatttgacttcaatttga 1694 |||||||||||||||||||||| Sbjct: 59553 catgaatttgacttcaatttga 59532
>ref|NM_116102.3| Arabidopsis thaliana unknown protein (AT3G62370) mRNA, complete cds Length = 1147 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 864 aacgatgactggaaggacattg 885 |||||||||||||||||||||| Sbjct: 184 aacgatgactggaaggacattg 205
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1383 aagcggctccatgaacaacttgaggt 1408 ||||| |||||||||||||||||||| Sbjct: 78291 aagcgactccatgaacaacttgaggt 78266
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1383 aagcggctccatgaacaacttgaggt 1408 ||||| |||||||||||||||||||| Sbjct: 2597 aagcgactccatgaacaacttgaggt 2622
>gb|AF083748.1| Arabidopsis thaliana clone sps512 unknown mRNA Length = 533 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 864 aacgatgactggaaggacattg 885 |||||||||||||||||||||| Sbjct: 165 aacgatgactggaaggacattg 186
>gb|AY133773.1| Arabidopsis thaliana clone U10771 unknown protein (At3g62370) mRNA, complete cds Length = 1117 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 864 aacgatgactggaaggacattg 885 |||||||||||||||||||||| Sbjct: 154 aacgatgactggaaggacattg 175
>gb|AY080841.1| Arabidopsis thaliana unknown protein (At3g62370) mRNA, complete cds Length = 1170 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 864 aacgatgactggaaggacattg 885 |||||||||||||||||||||| Sbjct: 184 aacgatgactggaaggacattg 205
>gb|AC125336.4| Homo sapiens BAC clone RP11-698E18 from 4, complete sequence Length = 17697 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1188 ttaatgaaggcagataatttga 1209 |||||||||||||||||||||| Sbjct: 9627 ttaatgaaggcagataatttga 9648
>emb|AL162507.1|ATT12C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T12C14 Length = 77720 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 864 aacgatgactggaaggacattg 885 |||||||||||||||||||||| Sbjct: 24179 aacgatgactggaaggacattg 24200
>gb|AC190140.3| Pan troglodytes BAC clone CH251-439F7 from chromosome 7, complete sequence Length = 157282 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1295 ggaggcctcaaaagaggattt 1315 ||||||||||||||||||||| Sbjct: 133514 ggaggcctcaaaagaggattt 133494
>gb|AC105137.18| Homo sapiens chromosome 15, clone CTD-2562G15, complete sequence Length = 171820 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1036 aatcatctgtagttgctgcac 1056 ||||||||||||||||||||| Sbjct: 87081 aatcatctgtagttgctgcac 87101
>ref|NM_001072763.1| Oryza sativa (japonica cultivar-group) Os12g0163500 (Os12g0163500) mRNA, complete cds Length = 1755 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 cgagcagagcaggggagggaa 282 ||||||||||||||||||||| Sbjct: 93 cgagcagagcaggggagggaa 113
>gb|AC188108.1| Pongo pygmaeus abelii chromosome UNK clone CH276-60H12, complete sequence Length = 198664 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1295 ggaggcctcaaaagaggattt 1315 ||||||||||||||||||||| Sbjct: 145283 ggaggcctcaaaagaggattt 145303
>gb|AC146273.2| Pan troglodytes BAC clone RP43-30B6 from 7, complete sequence Length = 190721 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1295 ggaggcctcaaaagaggattt 1315 ||||||||||||||||||||| Sbjct: 162147 ggaggcctcaaaagaggattt 162167
>gb|AC125064.6| Mus musculus BAC clone RP23-430F7 from chromosome 14, complete sequence Length = 188477 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 gagagagaactgagaagaaca 473 ||||||||||||||||||||| Sbjct: 93999 gagagagaactgagaagaaca 94019
>gb|AC114569.7| Mus musculus chromosome 6, clone RP23-139J6, complete sequence Length = 179927 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1727 tttatctgtgggagaaagggg 1747 ||||||||||||||||||||| Sbjct: 127349 tttatctgtgggagaaagggg 127369
>gb|AC112649.9| Homo sapiens 3 BAC RP11-65J14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70655 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 634 caagcactggaagttcttcag 654 ||||||||||||||||||||| Sbjct: 44669 caagcactggaagttcttcag 44689
>gb|AC161513.5| Mus musculus chromosome 3, clone RP23-238A12, complete sequence Length = 160438 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1204 atttgaccatttatcatgtaaaaag 1228 ||||||||||||||||| ||||||| Sbjct: 52276 atttgaccatttatcatataaaaag 52252
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 7.6 Identities = 60/73 (82%) Strand = Plus / Plus Query: 1162 aagctactccaaaaggagtgctgaagttaatgaaggcagataatttgaccatttatcatg 1221 |||||||||||||||| ||||| ||| | ||||| | ||| |||||| || ||||||| Sbjct: 12099050 aagctactccaaaaggtgtgctcaagcttatgaaagttgatggtttgacaatctatcatg 12099109 Query: 1222 taaaaagtcatct 1234 | || |||||||| Sbjct: 12099110 ttaagagtcatct 12099122
>emb|AL355515.12| Human DNA sequence from clone RP4-640F2 on chromosome 1 Contains the 5' end of a novel gene (KIAA1573), complete sequence Length = 105208 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gagcagagcaggggagggaag 283 ||||||||||||||||||||| Sbjct: 8669 gagcagagcaggggagggaag 8689
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 agcagagcaggggagggaagg 284 ||||||||||||||||||||| Sbjct: 85943 agcagagcaggggagggaagg 85923
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 946 tttcagttcaccaatcagccagcca 970 |||||||| |||||||||||||||| Sbjct: 137302 tttcagttaaccaatcagccagcca 137326
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 42.1 bits (21), Expect = 7.6 Identities = 60/73 (82%) Strand = Plus / Plus Query: 1162 aagctactccaaaaggagtgctgaagttaatgaaggcagataatttgaccatttatcatg 1221 |||||||||||||||| ||||| ||| | ||||| | ||| |||||| || ||||||| Sbjct: 122867 aagctactccaaaaggtgtgctcaagcttatgaaagttgatggtttgacaatctatcatg 122926 Query: 1222 taaaaagtcatct 1234 | || |||||||| Sbjct: 122927 ttaagagtcatct 122939
>gb|AY989168.1| Uncultured soil bacterium clone L1A.9B01 16S ribosomal RNA gene, partial sequence Length = 659 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 786 aacaatttgactggcatcagt 806 ||||||||||||||||||||| Sbjct: 73 aacaatttgactggcatcagt 93
>gb|AC084608.1|CBRG44A22 Caenorhabditis briggsae cosmid G44A22, complete sequence Length = 37682 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1228 gtcatcttcagaagtacagaa 1248 ||||||||||||||||||||| Sbjct: 6738 gtcatcttcagaagtacagaa 6758
>gb|AC084596.1|CBRG42F08 Caenorhabditis briggsae cosmid G42F08, complete sequence Length = 44999 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1228 gtcatcttcagaagtacagaa 1248 ||||||||||||||||||||| Sbjct: 41737 gtcatcttcagaagtacagaa 41757
>dbj|AK103122.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119K12, full insert sequence Length = 1756 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 cgagcagagcaggggagggaa 282 ||||||||||||||||||||| Sbjct: 94 cgagcagagcaggggagggaa 114
>dbj|AP003060.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-628J23, complete sequence Length = 165097 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1311 gatttgccatctatagacctt 1331 ||||||||||||||||||||| Sbjct: 2390 gatttgccatctatagacctt 2410
>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109081 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 cgagcagagcaggggagggaa 282 ||||||||||||||||||||| Sbjct: 12228 cgagcagagcaggggagggaa 12208
>dbj|AP001179.4| Homo sapiens genomic DNA, chromosome 11q14, clone:RP11-816L8, complete sequence Length = 221198 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1311 gatttgccatctatagacctt 1331 ||||||||||||||||||||| Sbjct: 220999 gatttgccatctatagacctt 221019 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 333,850,117 Number of extensions: 16781663 Number of successful extensions: 81487 Number of sequences better than 10.0: 95 Number of HSP's gapped: 81469 Number of HSP's successfully gapped: 175 Length of query: 1992 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1969 Effective length of database: 18,503,978,556 Effective search space: 36434333776764 Effective search space used: 36434333776764 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
