ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf67e04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066574:Os01g0968700 | 591 | e-169 | 2 | AK058395:Os01g0968700 | 177 | 1e-44 | 3 | AK070756:Os03g0810100 | 98 | 2e-20 | 4 | Os03g0356900:Os03g0356900 | 97 | 3e-20 | 5 | Os06g0729800:Os06g0729800 | 80 | 6e-15 | 6 | AK107474:Os05g0551700 | 75 | 2e-13 | 7 | AK071216:Os05g0551700 | 75 | 2e-13 | 8 | AK070523:Os04g0115400 | 32 | 1.7 | 9 | AK119878: | 31 | 2.3 | 10 | AK109804:Os12g0238900 | 31 | 3.0 | 11 | AK071783:Os11g0424400 | 31 | 3.0 | 12 | Os06g0272000:Os06g0272000 | 30 | 6.6 | 13 | AK110058:Os06g0275700 | 29 | 8.6 |
|---|
>AK066574:Os01g0968700 | Length = 462 Score = 591 bits (1524), Expect = e-169 Identities = 296/412 (71%), Positives = 330/412 (80%), Gaps = 4/412 (0%) Frame = +2 Query: 182 KSRLAVDLAGHFTGVEVVSADSMQVYRGLDVLTNKVSLHEQNGVPHHLLSIVDPSVEFTC 361 KSRLAVDLA HF GVEVVSADSMQVY GLDVLTNKV LHEQ GVPHHLLS++DPSVEFTC Sbjct: 47 KSRLAVDLASHFAGVEVVSADSMQVYGGLDVLTNKVPLHEQKGVPHHLLSVIDPSVEFTC 106 Query: 362 RDFRDHALPIIEDILDHGGLPVIVGGTNFYIQALVSPFLFEDMSEDMQGCTLSDQLDDIG 541 RDFRDHA+PIIE ILD GGLPVIVGGTNFYIQALVSPFLF+DM++D++G TL+D LD+IG Sbjct: 107 RDFRDHAVPIIEGILDRGGLPVIVGGTNFYIQALVSPFLFDDMAQDIEGLTLNDHLDEIG 166 Query: 542 LATDDVRSGYEHLKEIDPIAAQRIHPNNHRKINRYLELYATTGALPSDLFQGEAAEDKWG 721 L DD YEHLK+IDP+AAQRIHPNNHRKI RYLELY +TGALPSDLFQG+A E KWG Sbjct: 167 LDNDDEAGLYEHLKKIDPVAAQRIHPNNHRKIKRYLELYESTGALPSDLFQGQATE-KWG 225 Query: 722 RPTSSRFDCCFLWVDAELHVLDNYVNERVDCMINAGLLDEVRNIYNPGAVYTQGLRQAIG 901 RP++SRFDCCFLW+DA+LHVLD YVNERVDCMI+ GLLDEV NIY+ A YTQGLRQAIG Sbjct: 226 RPSNSRFDCCFLWLDADLHVLDRYVNERVDCMIDDGLLDEVCNIYDREATYTQGLRQAIG 285 Query: 902 VREFDEFFISYFTKKEPNNEMK----AGMXXXXXXXXXXXXXEAVSQLKANTXXXXXXXX 1069 VREFDEFF YF +KE E+K M EAVSQLKANT Sbjct: 286 VREFDEFFRFYFARKE-TGEIKMDSCTTMAGLHDDNLKGLLDEAVSQLKANTRRLVRRQR 344 Query: 1070 XXXXXXNKDFGWHLHHIDATEAFQCTTGDSWHVKVIKPCVDTVRRFLSNDTSLASKDCSN 1249 NK F W+L HIDATEAF T DSW++KV+KPCVD VR FLS+DT LAS+D S+ Sbjct: 345 RRLHRLNKYFEWNLRHIDATEAFYGATADSWNMKVVKPCVDIVRDFLSDDTILASRDGSS 404 Query: 1250 DGGGTRLASRELWTQYVCEACDNRILRGAHEWEQHKQGRGHRKRTQRLKRKS 1405 G R++SRELWTQYVCEACDNR+LRG HEWEQHKQGR HRKR QRLK+K+ Sbjct: 405 VTGSPRMSSRELWTQYVCEACDNRVLRGTHEWEQHKQGRCHRKRVQRLKQKA 456
>AK058395:Os01g0968700 | Length = 156 Score = 177 bits (450), Expect = 1e-44 Identities = 86/130 (66%), Positives = 98/130 (75%) Frame = +2 Query: 1016 EAVSQLKANTXXXXXXXXXXXXXXNKDFGWHLHHIDATEAFQCTTGDSWHVKVIKPCVDT 1195 EAVSQLKANT NK F W+L HIDATEAF T DSW++KV+KPCVD Sbjct: 21 EAVSQLKANTRRLVRRQRRRLHRLNKYFEWNLRHIDATEAFYGATADSWNMKVVKPCVDI 80 Query: 1196 VRRFLSNDTSLASKDCSNDGGGTRLASRELWTQYVCEACDNRILRGAHEWEQHKQGRGHR 1375 VR FLS+DT LAS+D S+ G R++SRELWTQYVCEACDNR+LRG HEWEQHKQGR HR Sbjct: 81 VRDFLSDDTILASRDGSSVTGSPRMSSRELWTQYVCEACDNRVLRGTHEWEQHKQGRCHR 140 Query: 1376 KRTQRLKRKS 1405 KR QRLK+K+ Sbjct: 141 KRVQRLKQKA 150
>AK070756:Os03g0810100 | Length = 357 Score = 97.8 bits (242), Expect = 2e-20 Identities = 50/95 (52%), Positives = 65/95 (68%) Frame = +2 Query: 182 KSRLAVDLAGHFTGVEVVSADSMQVYRGLDVLTNKVSLHEQNGVPHHLLSIVDPSVEFTC 361 KSRLAVDLA F G EV+++D MQ++ GLDV+TNKV+ E GVPHHL+S+ P EFT Sbjct: 65 KSRLAVDLALRFGG-EVINSDKMQIHSGLDVVTNKVTEEECAGVPHHLISVARPDDEFTA 123 Query: 362 RDFRDHALPIIEDILDHGGLPVIVGGTNFYIQALV 466 DFR A ++ G LP+I GG+N Y++ LV Sbjct: 124 ADFRREAARAAAGAVERGRLPIIAGGSNSYVEELV 158 Score = 84.3 bits (207), Expect = 2e-16 Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 4/176 (2%) Frame = +2 Query: 719 GRPTSSRFDCCFLWVDAELHVLDNYVNERVDCMINAGLLDEVRNIYNPGAV-YTQGLRQA 895 GR R++CCFLWVD +L VL +V RVD M GL+ EV ++P Y++G+ +A Sbjct: 162 GRAFRERYECCFLWVDVDLEVLRGFVARRVDEMCRRGLVREVAAAFDPRRTDYSRGIWRA 221 Query: 896 IGVREFDEFFISYFTKKEPNNEMKAGMXXXXXXXXXXXXXEAVSQLKANTXXXXXXXXXX 1075 IGV E D + S + E +A M AV+++K NT Sbjct: 222 IGVPELDAYLRS--RGDGADEEERARM-----------LAAAVAEIKLNT--FRLACRQH 266 Query: 1076 XXXXNKDFGWHLHHIDATEAFQ---CTTGDSWHVKVIKPCVDTVRRFLSNDTSLAS 1234 D W +DATE F+ D+W V PC+D VR FL D +S Sbjct: 267 RKIERLDRMWRARRVDATEVFRRRGHAADDAWQRLVAAPCIDAVRSFLFEDQERSS 322
>Os03g0356900:Os03g0356900 | Length = 325 Score = 97.1 bits (240), Expect = 3e-20 Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 15/192 (7%) Frame = +2 Query: 182 KSRLAVDLAGHFTGVEVVSADSMQVYRGLDVLTNKVSLHEQNGVPHHLLSIVDPSVEFTC 361 KS+LA+ +A F G EV+++D +QV+ G ++TNKV+ E+ GVPHHLL ++ P +FT Sbjct: 28 KSKLAISIAERFGG-EVINSDKIQVHDGFPIITNKVTEEERAGVPHHLLGVLHPDADFTA 86 Query: 362 RDFRDHALPIIEDILDHGGLPVIVGGTNFYIQALVSP------------FLFEDMSEDMQ 505 DFR A + +L G LPV+ GG+N Y++ALV FL+ D++ + Sbjct: 87 EDFRREAAAAVARVLAAGRLPVVAGGSNTYVEALVEGGGGAFRAAHDCLFLWTDVAPGLL 146 Query: 506 GCTLSDQLDDI---GLATDDVRSGYEHLKEIDPIAAQRIHPNNHRKINRYLELYATTGAL 676 + ++DD+ GL + R+G+ +D A + R + R + + G L Sbjct: 147 RWYTAARVDDMVRRGL-VGEARAGF-----VDGAGAADYYT---RGVRRAIGIPEMHGYL 197 Query: 677 PSDLFQGEAAED 712 ++ GEAA+D Sbjct: 198 LAERSGGEAADD 209 Score = 67.4 bits (163), Expect = 3e-11 Identities = 57/201 (28%), Positives = 82/201 (40%), Gaps = 9/201 (4%) Frame = +2 Query: 698 EAAEDKWGRPTSSRFDCCFLWVDAELHVLDNYVNERVDCMINAGLLDEVRNIYNPGA--- 868 EA + G + DC FLW D +L Y RVD M+ GL+ E R + GA Sbjct: 118 EALVEGGGGAFRAAHDCLFLWTDVAPGLLRWYTAARVDDMVRRGLVGEARAGFVDGAGAA 177 Query: 869 -VYTQGLRQAIGVREFDEFFISYFTKKEPNNEMKAGMXXXXXXXXXXXXXEAVSQLKANT 1045 YT+G+R+AIG+ E + ++ ++G AV ++KANT Sbjct: 178 DYYTRGVRRAIGIPEMHGYLLA----------ERSGGEAADDGELAAMLDGAVREIKANT 227 Query: 1046 XXXXXXXXXXXXXXNKDFGWHLHHIDAT-----EAFQCTTGDSWHVKVIKPCVDTVRRFL 1210 + GW + +DAT A ++W V KPC + V RFL Sbjct: 228 YRLAATQVAKIRRLSALDGWDVRRVDATVVVARMAEGAPHRETWEAVVWKPCEEMVGRFL 287 Query: 1211 SNDTSLASKDCSNDGGGTRLA 1273 + S A D N G+ A Sbjct: 288 --EASAAVDDDDNAAAGSPAA 306
>Os06g0729800:Os06g0729800 | Length = 463 Score = 79.7 bits (195), Expect = 6e-15 Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 4/171 (2%) Frame = +2 Query: 182 KSRLAVDLAGHFTGVEVVSADSMQVYRGLDVLTNKVSLHEQNGVPHHLLSIVDPSVEFTC 361 K+RLA+DLA +G E++SADS+QVYRGLDV + K S ++ VPHHL+ I+ S +++ Sbjct: 84 KTRLALDLAKRLSG-EIISADSVQVYRGLDVGSAKPSSSDRAAVPHHLIDILHASDDYSA 142 Query: 362 RDFRDHALPIIEDILDHGGLPVIVGGTNFYIQALV--SPFLFEDMSEDMQGCTLSD--QL 529 DF A + +L +P++ GGT Y++ + P + S D+ S+ + Sbjct: 143 GDFFHDARAATDHLLARARVPIVAGGTGLYLRWYIYGKPSV-PQSSMDVTSAVWSELSRF 201 Query: 530 DDIGLATDDVRSGYEHLKEIDPIAAQRIHPNNHRKINRYLELYATTGALPS 682 D G + V + + A+ + NN ++ R LE+ ++G+ PS Sbjct: 202 RDTGRWEEAV----DLVANAGDPKARDLSVNNWSRLRRSLEIIRSSGSPPS 248
>AK107474:Os05g0551700 | Length = 376 Score = 74.7 bits (182), Expect = 2e-13 Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Frame = +2 Query: 182 KSRLAVDLAGHFTGVEVVSADSMQVYRGLDVLTNKVSLHEQNGVPHHLLSIVDPSV-EFT 358 K++L++D A G EVV+AD +Q+Y GLDV TNKVSL ++ GVPHHLL + P E Sbjct: 46 KTKLSID-AAKVIGGEVVNADKIQLYDGLDVTTNKVSLADRRGVPHHLLGAIRPEAGELP 104 Query: 359 CRDFRDHALPIIEDILDHGGLPVIVGGTNFYIQALVS 469 FR A I +PVI GG+N I AL++ Sbjct: 105 PSSFRSLAAATAASIAARRLVPVIAGGSNSLIHALLA 141 Score = 72.8 bits (177), Expect = 7e-13 Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 12/184 (6%) Frame = +2 Query: 737 RFDCCFLWVDAELHVLDNYVNERVDCMINAGLLDEVRNIYNPGAVYTQ----GLRQAIGV 904 RF CC LWV + +LD Y++ RVD M++AG+++E+R + + GL +AIGV Sbjct: 166 RFPCCLLWVHVDEALLDEYLDRRVDDMVDAGMVEELREYFATTTAAERAAHSGLGKAIGV 225 Query: 905 REFDEFFISYFTKKEPNNEMKAGMXXXXXXXXXXXXXEAVSQLKANTXXXXXXXXXXXXX 1084 E ++F T EA+ +KANT Sbjct: 226 PELGDYFAGRKT-----------------------FSEAIDDIKANTRVLAAAQVSKIRR 262 Query: 1085 XNKDFGWHLHHIDA--------TEAFQCTTGDSWHVKVIKPCVDTVRRFLSNDTSLASKD 1240 + +GW +H +DA T A SW V P + T+R FL++ + + Sbjct: 263 MSDAWGWPIHRLDASDTVRARLTRAGSAAESASWERDVRGPGLATIRSFLADQSPPPRSE 322 Query: 1241 CSND 1252 +ND Sbjct: 323 GTND 326
>AK071216:Os05g0551700 | Length = 376 Score = 74.7 bits (182), Expect = 2e-13 Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Frame = +2 Query: 182 KSRLAVDLAGHFTGVEVVSADSMQVYRGLDVLTNKVSLHEQNGVPHHLLSIVDPSV-EFT 358 K++L++D A G EVV+AD +Q+Y GLDV TNKVSL ++ GVPHHLL + P E Sbjct: 46 KTKLSID-AAKVIGGEVVNADKIQLYDGLDVTTNKVSLADRRGVPHHLLGAIRPEAGELP 104 Query: 359 CRDFRDHALPIIEDILDHGGLPVIVGGTNFYIQALVS 469 FR A I +PVI GG+N I AL++ Sbjct: 105 PSSFRSLAAATAASIAARRLVPVIAGGSNSLIHALLA 141 Score = 72.8 bits (177), Expect = 7e-13 Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 12/184 (6%) Frame = +2 Query: 737 RFDCCFLWVDAELHVLDNYVNERVDCMINAGLLDEVRNIYNPGAVYTQ----GLRQAIGV 904 RF CC LWV + +LD Y++ RVD M++AG+++E+R + + GL +AIGV Sbjct: 166 RFPCCLLWVHVDEALLDEYLDRRVDDMVDAGMVEELREYFATTTAAERAAHSGLGKAIGV 225 Query: 905 REFDEFFISYFTKKEPNNEMKAGMXXXXXXXXXXXXXEAVSQLKANTXXXXXXXXXXXXX 1084 E ++F T EA+ +KANT Sbjct: 226 PELGDYFAGRKT-----------------------FSEAIDDIKANTRVLAAAQVSKIRR 262 Query: 1085 XNKDFGWHLHHIDA--------TEAFQCTTGDSWHVKVIKPCVDTVRRFLSNDTSLASKD 1240 + +GW +H +DA T A SW V P + T+R FL++ + + Sbjct: 263 MSDAWGWPIHRLDASDTVRARLTRAGSAAESASWERDVRGPGLATIRSFLADQSPPPRSE 322 Query: 1241 CSND 1252 +ND Sbjct: 323 GTND 326
>AK070523:Os04g0115400 | Length = 345 Score = 31.6 bits (70), Expect = 1.7 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = +2 Query: 1277 RELWTQYVCEACDNRILRGAHEWEQHKQGRGHRKRTQRLKRKSKMKSTSSEA 1432 +E+ + C C N+ + AHE+E H H R +R K +M+S+SS + Sbjct: 196 KEIQKVFFCSLC-NKQYKLAHEFESHLSSYDHNHR-KRFKEMKEMQSSSSSS 245
>AK119878: | Length = 630 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -1 Query: 349 HGRIDDAKEMVRNTVLLMEGDLVSEDIETAVDLHGVGADHLDAG 218 H RIDD +++V+ T + + E + +A+ GV DHL G Sbjct: 275 HLRIDDLRDLVKKTGAQLPREPTKEGVISALVAKGVSLDHLTRG 318
>AK109804:Os12g0238900 | Length = 520 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Frame = -1 Query: 316 RNTVLLMEGDLVSEDIE------TAVDLHGVGADHLDAGKVARQVNGKPGLAGARRA 164 R T LL+ D V+ E A +L GADH D +VAR VN + G A Sbjct: 355 RGTRLLLNTDAVARAAEQVGFEAVASELDMAGADHDDVARVARLVNSFDAVVGVHGA 411
>AK071783:Os11g0424400 | Length = 325 Score = 30.8 bits (68), Expect = 3.0 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 Query: 1398 RFKRCVLFRWPRPCLCCSHSCAPR 1327 RF +C F+ P P CCS SC R Sbjct: 300 RFPKCCAFKLPSPSSCCSCSCFRR 323
>Os06g0272000:Os06g0272000 | Length = 1094 Score = 29.6 bits (65), Expect = 6.6 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%) Frame = -1 Query: 598 NRINLLQVFIPTSNIIRGKAYIIKLVTQSATLHIF*HILKKEWT--------NKSLYIEV 443 N +L Q+ I +N+ Y + +++ L +I +T N S + V Sbjct: 415 NMNSLKQLSIAQNNLQGDIGYFLSILSNCINLSTL-YIYSNHFTGSLPGSVGNLSSLLRV 473 Query: 442 CAANNNRQAAMIQYIFYNRQGM-ITEIAASELHGRIDDAKEMVRNTVLL 299 +A N + + N G+ + ++ ++LHG+I ++ M+RN V L Sbjct: 474 FSAFENSFTGELPAMISNLTGIQVLDLGGNQLHGKIPESIMMMRNLVFL 522
>AK110058:Os06g0275700 | Length = 973 Score = 29.3 bits (64), Expect = 8.6 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = -1 Query: 442 CAANNNRQAAMIQYIFYNRQGMITEIAASELHGRIDDAKEMVRNTVLLMEGDLVSEDIET 263 C A A++ + N G + + L +DDA ++ R +L E D + Sbjct: 829 CLAEAGAVEALVGVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHDAARHVLRA 888 Query: 262 AVDLHGVGADHLDAGKVARQ 203 VG D AG V+R+ Sbjct: 889 LRQHRDVGGD--TAGAVSRR 906 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 48,046,571 Number of extensions: 1114194 Number of successful extensions: 3212 Number of sequences better than 10.0: 13 Number of HSP's gapped: 3199 Number of HSP's successfully gapped: 17 Length of query: 553 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 447 Effective length of database: 11,155,509 Effective search space: 4986512523 Effective search space used: 4986512523 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
