ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf67d21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os06g0725400:Os06g0725400 34 0.060
2AY224549:Os01g0109700 29 1.9
3AK121497:Os01g0109700 29 1.9
4AK073919:Os02g0817200 28 4.3
5AK068256:Os02g0758100 28 4.3
6AK064259:Os02g0758100 28 4.3
7Os11g0257200:Os11g0257200 27 9.5

>Os06g0725400:Os06g0725400 |
          Length = 53
 Score = 33.9 bits (76), Expect = 0.060
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
 Frame = +3

Query: 117 QGLCS--WVCVILGMAMMITLMV 179
           +GLC+  WVCVILGM MM  LMV
Sbjct: 24  KGLCAVMWVCVILGMVMMTILMV 46



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>AY224549:Os01g0109700 |
          Length = 181

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -2

Query: 401 PKHFPPQQASNKISLGAKQINTFKQHRDEMTYGCAFISRDSRRDMQHNSS 252
           PKH+P   A NK  LGA  +N    H   +T G    S    R  Q+  S
Sbjct: 95  PKHYPMPPAGNKTELGASVLN---DHWVSVTSGSEDYSFKHMRKNQYEES 141



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>AK121497:Os01g0109700 |
          Length = 1326

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -2

Query: 401 PKHFPPQQASNKISLGAKQINTFKQHRDEMTYGCAFISRDSRRDMQHNSS 252
           PKH+P   A NK  LGA  +N    H   +T G    S    R  Q+  S
Sbjct: 397 PKHYPMPPAGNKTELGASVLN---DHWVSVTSGSEDYSFKHMRKNQYEES 443



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>AK073919:Os02g0817200 |
          Length = 375

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = +2

Query: 383 AVGNASASMCCCDHHRQSSWVL*EILRK 466
           AVG+ + S+C C + + ++W + +++RK
Sbjct: 114 AVGSGAKSVCICYYEQDNNWWISKVVRK 141



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>AK068256:Os02g0758100 |
          Length = 734

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 1   DARTHTERHRGNPDDATPDLGEG 69
           DA+T  E+  GN DDA P  G G
Sbjct: 455 DAKTTFEKRMGNIDDAVPFFGRG 477



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>AK064259:Os02g0758100 |
          Length = 618

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 1   DARTHTERHRGNPDDATPDLGEG 69
           DA+T  E+  GN DDA P  G G
Sbjct: 455 DAKTTFEKRMGNIDDAVPFFGRG 477



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>Os11g0257200:Os11g0257200 |
          Length = 375

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 455 FLKEPMMTVCGDHNNT 408
           F+ E + T+C DHNNT
Sbjct: 68  FVSEAITTICEDHNNT 83


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 11,014,053
Number of extensions: 182874
Number of successful extensions: 454
Number of sequences better than 10.0: 7
Number of HSP's gapped: 453
Number of HSP's successfully gapped: 7
Length of query: 167
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 74
Effective length of database: 11,676,042
Effective search space: 864027108
Effective search space used: 864027108
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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