| Clone Name | FLbaf67d21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os06g0725400:Os06g0725400 | 34 | 0.060 | 2 | AY224549:Os01g0109700 | 29 | 1.9 | 3 | AK121497:Os01g0109700 | 29 | 1.9 | 4 | AK073919:Os02g0817200 | 28 | 4.3 | 5 | AK068256:Os02g0758100 | 28 | 4.3 | 6 | AK064259:Os02g0758100 | 28 | 4.3 | 7 | Os11g0257200:Os11g0257200 | 27 | 9.5 |
|---|
>Os06g0725400:Os06g0725400 | Length = 53 Score = 33.9 bits (76), Expect = 0.060 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 2/23 (8%) Frame = +3 Query: 117 QGLCS--WVCVILGMAMMITLMV 179 +GLC+ WVCVILGM MM LMV Sbjct: 24 KGLCAVMWVCVILGMVMMTILMV 46
>AY224549:Os01g0109700 | Length = 181 Score = 28.9 bits (63), Expect = 1.9 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -2 Query: 401 PKHFPPQQASNKISLGAKQINTFKQHRDEMTYGCAFISRDSRRDMQHNSS 252 PKH+P A NK LGA +N H +T G S R Q+ S Sbjct: 95 PKHYPMPPAGNKTELGASVLN---DHWVSVTSGSEDYSFKHMRKNQYEES 141
>AK121497:Os01g0109700 | Length = 1326 Score = 28.9 bits (63), Expect = 1.9 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -2 Query: 401 PKHFPPQQASNKISLGAKQINTFKQHRDEMTYGCAFISRDSRRDMQHNSS 252 PKH+P A NK LGA +N H +T G S R Q+ S Sbjct: 397 PKHYPMPPAGNKTELGASVLN---DHWVSVTSGSEDYSFKHMRKNQYEES 443
>AK073919:Os02g0817200 | Length = 375 Score = 27.7 bits (60), Expect = 4.3 Identities = 9/28 (32%), Positives = 20/28 (71%) Frame = +2 Query: 383 AVGNASASMCCCDHHRQSSWVL*EILRK 466 AVG+ + S+C C + + ++W + +++RK Sbjct: 114 AVGSGAKSVCICYYEQDNNWWISKVVRK 141
>AK068256:Os02g0758100 | Length = 734 Score = 27.7 bits (60), Expect = 4.3 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 1 DARTHTERHRGNPDDATPDLGEG 69 DA+T E+ GN DDA P G G Sbjct: 455 DAKTTFEKRMGNIDDAVPFFGRG 477
>AK064259:Os02g0758100 | Length = 618 Score = 27.7 bits (60), Expect = 4.3 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 1 DARTHTERHRGNPDDATPDLGEG 69 DA+T E+ GN DDA P G G Sbjct: 455 DAKTTFEKRMGNIDDAVPFFGRG 477
>Os11g0257200:Os11g0257200 | Length = 375 Score = 26.6 bits (57), Expect = 9.5 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -2 Query: 455 FLKEPMMTVCGDHNNT 408 F+ E + T+C DHNNT Sbjct: 68 FVSEAITTICEDHNNT 83 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,014,053 Number of extensions: 182874 Number of successful extensions: 454 Number of sequences better than 10.0: 7 Number of HSP's gapped: 453 Number of HSP's successfully gapped: 7 Length of query: 167 Length of database: 15,399,855 Length adjustment: 93 Effective length of query: 74 Effective length of database: 11,676,042 Effective search space: 864027108 Effective search space used: 864027108 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)