ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf67d21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O60182:RFC1_SCHPO Replication factor C subunit 1 - Schizosacchar... 31 2.0

>O60182:RFC1_SCHPO Replication factor C subunit 1 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 934
 Score = 31.2 bits (69), Expect = 2.0
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +3

Query: 258 IVLHVSTRVSANKSTTICHFIPVLFES--VNLFSTQTDFVAGLL 383
           I +H+  +VSANK     H+IP+L+ES  V L +  +D V  ++
Sbjct: 753 IQVHMRLKVSANKLDLRQHYIPILYESLPVKLSTGHSDVVPEII 796


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 67,412,712
Number of extensions: 1091984
Number of successful extensions: 1994
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1994
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 100,686,439
Length adjustment: 105
Effective length of query: 62
Effective length of database: 71,885,464
Effective search space: 4456898768
Effective search space used: 4456898768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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