ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf67d17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105875.1| Zea mays PCO125270 mRNA sequence Length = 1555 Score = 644 bits (325), Expect = 0.0 Identities = 520/585 (88%) Strand = Plus / Plus Query: 355 tttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaagt 414 ||||||||||| ||||| || ||||||||||| |||||||| ||||||||||||||| | Sbjct: 432 tttgagcaaacataccgttgttatccagcatcgttttttgataagccacacctggaaggc 491 Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 ||||| |||||||||||||| || |||||||| |||||||| |||||| ||||||| ||| Sbjct: 492 ggtgataaagtaataatgccaccttctgcccttgatcgtcttgcttccttgcacatcgag 551 Query: 475 tatcctatgctatttgaactgcacaatggtgtcaccgacaggatttcacactgtggtgta 534 || |||||||||||||| |||||||||| || ||| | ||||||||||||||||||| Sbjct: 552 taccctatgctatttgagctgcacaatgatgcaacccagcggatttcacactgtggtgtt 611 Query: 535 ttggagtttgtagcagaagaagggttgatcatcatgccctactggatgatgcaaaacatg 594 ||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 612 ttggagtttgttgcagaagaaggcatgatcatcatgccctattggatgatgcaaaacatg 671 Query: 595 cttcttcaagagggtgacattgtgcgtgtcaagaatgctactcttcccaagggtacatat 654 || |||||||||||||||| ||| | ||| || ||||| |||||||||||||| |||||| Sbjct: 672 ctgcttcaagagggtgacactgtccatgtaaaaaatgcgactcttcccaagggcacatat 731 Query: 655 gtgaagctgcagcctcacacgactgatttcctagacatctccaaccccaaagccatcttg 714 ||||| |||| |||||||| |||||||| || || || || ||||| |||||||||||| Sbjct: 732 gtgaaattgcaacctcacacaactgattttctggatatttcaaacccgaaagccatcttg 791 Query: 715 gagaaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagcttac 774 || |||||| ||||||| ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 792 gaaaaaactttaagaaatttctcctgcttaaccacgggagacagcatcatggtagcctac 851 Query: 775 aacaacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagcatt 834 ||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||| Sbjct: 852 aacaacaaacaatattatattgatattgttgaaacaaagcctgcttctgcggttagcatt 911 Query: 835 attgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaaaa 894 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 912 attgagacagactgtgaagtggactttgcgcctcctcttgattataaagaacctgagaaa 971 Query: 895 ccacagcgtcccatagttcctgcaggcaaggcacctgctgaagat 939 |||| | || | |||||||||| |||||||||||||||||||| Sbjct: 972 ccacgacaaccaacagttcctgcaagcaaggcacctgctgaagat 1016 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 958 gatgaaccaaagttcaaaccattcactggttcaggaaaacggttggatgg 1007 ||||||||||| ||||||||||| ||||||| ||||| ||||||||||| Sbjct: 1035 gatgaaccaaaattcaaaccatttactggttttggaaagcggttggatgg 1084 Score = 50.1 bits (25), Expect = 0.023 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1255 gcgttcactgggaagagctactccttgaagcgttagctgct 1295 ||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 1326 gcgttcagcgggaagagctactcattgaaacgttagctgct 1366 Score = 48.1 bits (24), Expect = 0.092 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1063 tctgcaccttcagacacaaacaaaagggcaaaccagcaaa 1102 |||||||||||||| |||||||||| ||||| ||||||| Sbjct: 1131 tctgcaccttcagattcaaacaaaagagcaaatcagcaaa 1170 Score = 48.1 bits (24), Expect = 0.092 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1138 cagaaaacaggaaagcttgtgtttggttcaagtgcaagca 1177 |||||||| || || ||||| ||||||||||||||||||| Sbjct: 1212 cagaaaactgggaaacttgtttttggttcaagtgcaagca 1251
>dbj|AK073711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061G23, full insert sequence Length = 1306 Score = 626 bits (316), Expect = e-176 Identities = 598/692 (86%) Strand = Plus / Plus Query: 319 atgttttatgcaggatatggttaccatgctaataattttgagcaaacgtaccgctgctat 378 |||||||||||||||||||| ||||||| | ||| ||||||||||| ||||| || ||| Sbjct: 156 atgttttatgcaggatatggctaccatgggagtaactttgagcaaacataccgttgttat 215 Query: 379 ccagcatccttttttgacaagccacacctggaaagtggtgacaaagtaataatgccgcca 438 |||||||| || ||||||||||||||||||||| |||| ||||||||||| ||||| ||| Sbjct: 216 ccagcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccacca 275 Query: 439 tctgccctggatcgtctggcttccctgcacattgagtatcctatgctatttgaactgcac 498 ||||| || ||||| || ||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 276 tctgctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttgagttgcat 335 Query: 499 aatggtgtcaccgacaggatttcacactgtggtgtattggagtttgtagcagaagaaggg 558 |||| || || | ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 336 aatgatgcaactcagcggatttcacactgtggtgtgctggaatttgtggcagaagaaggc 395 Query: 559 ttgatcatcatgccctactggatgatgcaaaacatgcttcttcaagagggtgacattgtg 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 396 atgatcatcatgccctactggatgatgcaaaacatgcttcttcaagagggtgacactgtc 455 Query: 619 cgtgtcaagaatgctactcttcccaagggtacatatgtgaagctgcagcctcacacgact 678 ||||| || ||| | || |||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 456 cgtgtaaaaaatacaacccttcccaagggtacatatgtcaagttgcagcctcacacaact 515 Query: 679 gatttcctagacatctccaaccccaaagccatcttggagaaaactctaagaaacttctct 738 || || | |||||||| || || || |||||| |||||||||| ||||||||||||||| Sbjct: 516 gactttttggacatctcaaatccgaaggccatcctggagaaaacactaagaaacttctct 575 Query: 739 tgcttaaccacgggcgacagcatcatggtagcttacaacaacaaacagtattatattgat 798 || |||||||| ||||| || |||||||||||||||||||||||||| || || ||||| Sbjct: 576 tgtttaaccaccggcgatagtatcatggtagcttacaacaacaaacaatactacattgac 635 Query: 799 attgttgaagcaaaacctgcttctgcagttagcattattgagacagactgtgaagtggac 858 ||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 636 attgttgaaacaaaacctgcttccgcagttagtattattgagacggactgtgaagtggac 695 Query: 859 tttgcacctcctcttgattacaaagaacctgaaaaaccacagcgtcccatagttcctgca 918 ||||||||||||||||||||||||||||||||||| || |||| || |||||||||| Sbjct: 696 tttgcacctcctcttgattacaaagaacctgaaaatccgcagcaaccatcagttcctgca 755 Query: 919 ggcaaggcacctgctgaagatcaagaggctaatgttgaagatgaaccaaagttcaaacca 978 | ||||| ||||||||||| || | ||||| ||||||||||||| || ||||| || Sbjct: 756 agtgaggcaactgctgaagatgaaaatgctaaagttgaagatgaactgaaattcaagccg 815 Query: 979 ttcactggttcaggaaaacggttggatggtaa 1010 || |||||||| ||||| || |||||||||| Sbjct: 816 tttactggttctggaaagtggctggatggtaa 847 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1135 cgccagaaaacaggaaagcttgtgtttggttcaagtgcaagcagcaagaaaga 1187 ||||||||| ||||||||||||| || ||||||||||||| || ||| ||||| Sbjct: 969 cgccagaaatcaggaaagcttgttttcggttcaagtgcaaacaacaacaaaga 1021 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 1226 ctccgaagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagc 1285 |||| |||||||| || || |||||| | || || | ||||||||||||||||||||| | Sbjct: 1054 ctccaaagaaggacgagcccaagttccaagcatttagtgggaagagctactccttgaaac 1113 Query: 1286 gttagctg 1293 |||||||| Sbjct: 1114 gttagctg 1121
>ref|NM_001060164.1| Oryza sativa (japonica cultivar-group) Os04g0577000 (Os04g0577000) mRNA, complete cds Length = 1305 Score = 611 bits (308), Expect = e-171 Identities = 596/692 (86%) Strand = Plus / Plus Query: 319 atgttttatgcaggatatggttaccatgctaataattttgagcaaacgtaccgctgctat 378 |||||||||||||||||||| ||||||| | ||| ||||||||||| ||||| || ||| Sbjct: 155 atgttttatgcaggatatggctaccatgggagtaactttgagcaaacataccgttgttat 214 Query: 379 ccagcatccttttttgacaagccacacctggaaagtggtgacaaagtaataatgccgcca 438 |||||||| || ||||||||||||||||||||| |||| ||||||||||| ||||| ||| Sbjct: 215 ccagcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccacca 274 Query: 439 tctgccctggatcgtctggcttccctgcacattgagtatcctatgctatttgaactgcac 498 ||||| || ||||| || ||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 275 tctgctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttgagttgcat 334 Query: 499 aatggtgtcaccgacaggatttcacactgtggtgtattggagtttgtagcagaagaaggg 558 |||| || || | ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 335 aatgatgcaactcagcggatttcacactgtggtgtgctggaatttgtggcagaagaaggc 394 Query: 559 ttgatcatcatgccctactggatgatgcaaaacatgcttcttcaagagggtgacattgtg 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 395 atgatcatcatgccctactggatgatgcaaaacatgcttcttcaagagggtgacactgtc 454 Query: 619 cgtgtcaagaatgctactcttcccaagggtacatatgtgaagctgcagcctcacacgact 678 ||||| || ||| | || |||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 455 cgtgtaaaaaatacaacccttcccaagggtacatatgtcaagttgcagcctcacacaact 514 Query: 679 gatttcctagacatctccaaccccaaagccatcttggagaaaactctaagaaacttctct 738 || || | |||||||| || || || |||||| |||||||||| |||||||| || ||| Sbjct: 515 gactttttggacatctcaaatccgaaggccatcctggagaaaacactaagaaagttgtct 574 Query: 739 tgcttaaccacgggcgacagcatcatggtagcttacaacaacaaacagtattatattgat 798 || ||||||| ||||| || |||||||||||||||||||||||||| || || ||||| Sbjct: 575 tgtataaccaccggcgatagtatcatggtagcttacaacaacaaacaatactacattgac 634 Query: 799 attgttgaagcaaaacctgcttctgcagttagcattattgagacagactgtgaagtggac 858 ||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 635 attgttgaaacaaaacctgcttccgcagttagtattattgagacggactgtgaagtggac 694 Query: 859 tttgcacctcctcttgattacaaagaacctgaaaaaccacagcgtcccatagttcctgca 918 ||||||||||||||||||||||||||||||||||| || |||| || |||||||||| Sbjct: 695 tttgcacctcctcttgattacaaagaacctgaaaatccgcagcaaccatcagttcctgca 754 Query: 919 ggcaaggcacctgctgaagatcaagaggctaatgttgaagatgaaccaaagttcaaacca 978 | ||||| ||||||||||| || | ||||| ||||||||||||| || ||||| || Sbjct: 755 agtgaggcaactgctgaagatgaaaatgctaaagttgaagatgaactgaaattcaagccg 814 Query: 979 ttcactggttcaggaaaacggttggatggtaa 1010 || |||||||| ||||| ||| |||||||||| Sbjct: 815 tttactggttctggaaagcggctggatggtaa 846 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1135 cgccagaaaacaggaaagcttgtgtttggttcaagtgcaagcagcaagaaaga 1187 ||||||||| ||||||||||||| || ||||||||||||| || ||| ||||| Sbjct: 968 cgccagaaatcaggaaagcttgttttcggttcaagtgcaaacaacaacaaaga 1020 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 1226 ctccgaagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagc 1285 |||| |||||||| || || |||||| | || || | ||||||||||||||||||||| | Sbjct: 1053 ctccaaagaaggacgagcccaagttccaagcatttagtgggaagagctactccttgaaac 1112 Query: 1286 gttagctg 1293 |||||||| Sbjct: 1113 gttagctg 1120
>dbj|AK119957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C12, full insert sequence Length = 1108 Score = 577 bits (291), Expect = e-161 Identities = 504/575 (87%) Strand = Plus / Plus Query: 319 atgttttatgcaggatatggttaccatgctaataattttgagcaaacgtaccgctgctat 378 |||||||||||||||||||| ||||||| | ||| ||||||||||| ||||| || ||| Sbjct: 130 atgttttatgcaggatatggctaccatgggagtaactttgagcaaacataccgttgttat 189 Query: 379 ccagcatccttttttgacaagccacacctggaaagtggtgacaaagtaataatgccgcca 438 |||||||| || ||||||||||||||||||||| |||| ||||||||||| ||||| ||| Sbjct: 190 ccagcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccacca 249 Query: 439 tctgccctggatcgtctggcttccctgcacattgagtatcctatgctatttgaactgcac 498 ||||| || ||||| || ||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 250 tctgctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttgagttgcat 309 Query: 499 aatggtgtcaccgacaggatttcacactgtggtgtattggagtttgtagcagaagaaggg 558 |||| || || | ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 310 aatgatgcaactcagcggatttcacactgtggtgtgctggaatttgtggcagaagaaggc 369 Query: 559 ttgatcatcatgccctactggatgatgcaaaacatgcttcttcaagagggtgacattgtg 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 370 atgatcatcatgccctactggatgatgcaaaacatgcttcttcaagagggtgacactgtc 429 Query: 619 cgtgtcaagaatgctactcttcccaagggtacatatgtgaagctgcagcctcacacgact 678 ||||| || ||| | || | |||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 430 cgtgtaaaaaatacaacccctcccaagggtacatatgtcaagttgcagcctcacacaact 489 Query: 679 gatttcctagacatctccaaccccaaagccatcttggagaaaactctaagaaacttctct 738 || || | |||||||| || || | |||||| |||||||||| ||||||||||||||| Sbjct: 490 gactttttggacatctcaaatccgagggccatcctggagaaaacactaagaaacttctct 549 Query: 739 tgcttaaccacgggcgacagcatcatggtagcttacaacaacaaacagtattatattgat 798 || |||||||| ||||| || |||||||||||||||||||||||||| || || ||||| Sbjct: 550 tgtttaaccaccggcgatagtatcatggtagcttacaacaacaaacaatactacattgac 609 Query: 799 attgttgaagcaaaacctgcttctgcagttagcattattgagacagactgtgaagtggac 858 ||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 610 attgttgaaacaaaacctgcttccgcagttagtattattgagacggactgtgaagtggac 669 Query: 859 tttgcacctcctcttgattacaaagaacctgaaaa 893 ||||||||||||||||||||||||||||||||||| Sbjct: 670 tttgcacctcctcttgattacaaagaacctgaaaa 704
>emb|CR855139.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0404F02, complete sequence Length = 130181 Score = 256 bits (129), Expect = 2e-64 Identities = 168/181 (92%) Strand = Plus / Plus Query: 713 tggagaaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagctt 772 |||||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||||| Sbjct: 11713 tggagaaaacactaagaaacttctcttgtttaaccaccggcgatagtatcatggtagctt 11772 Query: 773 acaacaacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagca 832 ||||||||||||| || || ||||| ||||||||| ||||||||||||| |||||||| | Sbjct: 11773 acaacaacaaacaatactacattgacattgttgaaacaaaacctgcttccgcagttagta 11832 Query: 833 ttattgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaa 892 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11833 ttattgagacggactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaa 11892 Query: 893 a 893 | Sbjct: 11893 a 11893 Score = 123 bits (62), Expect = 2e-24 Identities = 92/102 (90%) Strand = Plus / Plus Query: 579 gatgatgcaaaacatgcttcttcaagagggtgacattgtgcgtgtcaagaatgctactct 638 ||||||||||||||||||||||||||||||||||| ||| ||||| || ||| | || || Sbjct: 11484 gatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaaccct 11543 Query: 639 tcccaagggtacatatgtgaagctgcagcctcacacgactga 680 |||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 11544 tcccaagggtacatatgtcaagttgcagcctcacacaactga 11585 Score = 93.7 bits (47), Expect = 2e-15 Identities = 104/123 (84%) Strand = Plus / Plus Query: 457 gcttccctgcacattgagtatcctatgctatttgaactgcacaatggtgtcaccgacagg 516 ||||| ||||||||||| ||||||||||| ||||| |||| |||| || || | || Sbjct: 11262 gcttctctgcacattgaatatcctatgctgtttgagttgcataatgatgcaactcagcgg 11321 Query: 517 atttcacactgtggtgtattggagtttgtagcagaagaagggttgatcatcatgccctac 576 ||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 11322 atttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctac 11381 Query: 577 tgg 579 ||| Sbjct: 11382 tgg 11384 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Plus Query: 321 gttttatgcaggatatggttaccatgctaataattttgagcaaacgtaccgctgctatcc 380 |||||||||||||||||| ||||||| | ||| ||||||||||| ||||| || ||||| Sbjct: 10848 gttttatgcaggatatggctaccatgggagtaactttgagcaaacataccgttgttatcc 10907 Query: 381 agcatccttttttgacaag 399 |||||| || ||||||||| Sbjct: 10908 agcatctttctttgacaag 10926 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1135 cgccagaaaacaggaaagcttgtgtttggttcaagtgcaagcagcaagaaaga 1187 ||||||||| ||||||||||||| || ||||||||||||| || ||| ||||| Sbjct: 12838 cgccagaaatcaggaaagcttgttttcggttcaagtgcaaacaacaacaaaga 12890 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 1226 ctccgaagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagc 1285 |||| |||||||| || || |||||| | || || | ||||||||||||||||||||| | Sbjct: 13349 ctccaaagaaggacgagcccaagttccaagcatttagtgggaagagctactccttgaaac 13408 Query: 1286 gttagctg 1293 |||||||| Sbjct: 13409 gttagctg 13416
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 232 bits (117), Expect = 3e-57 Identities = 165/181 (91%) Strand = Plus / Plus Query: 713 tggagaaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagctt 772 |||||||||| |||||||| || ||||| ||||||| ||||| || ||||||||||||| Sbjct: 29064244 tggagaaaacactaagaaagttgtcttgtataaccaccggcgatagtatcatggtagctt 29064303 Query: 773 acaacaacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagca 832 ||||||||||||| || || ||||| ||||||||| ||||||||||||| |||||||| | Sbjct: 29064304 acaacaacaaacaatactacattgacattgttgaaacaaaacctgcttccgcagttagta 29064363 Query: 833 ttattgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaa 892 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29064364 ttattgagacggactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaa 29064423 Query: 893 a 893 | Sbjct: 29064424 a 29064424 Score = 123 bits (62), Expect = 2e-24 Identities = 92/102 (90%) Strand = Plus / Plus Query: 579 gatgatgcaaaacatgcttcttcaagagggtgacattgtgcgtgtcaagaatgctactct 638 ||||||||||||||||||||||||||||||||||| ||| ||||| || ||| | || || Sbjct: 29064014 gatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaaccct 29064073 Query: 639 tcccaagggtacatatgtgaagctgcagcctcacacgactga 680 |||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 29064074 tcccaagggtacatatgtcaagttgcagcctcacacaactga 29064115 Score = 93.7 bits (47), Expect = 2e-15 Identities = 104/123 (84%) Strand = Plus / Plus Query: 457 gcttccctgcacattgagtatcctatgctatttgaactgcacaatggtgtcaccgacagg 516 ||||| ||||||||||| ||||||||||| ||||| |||| |||| || || | || Sbjct: 29063792 gcttctctgcacattgaatatcctatgctgtttgagttgcataatgatgcaactcagcgg 29063851 Query: 517 atttcacactgtggtgtattggagtttgtagcagaagaagggttgatcatcatgccctac 576 ||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 29063852 atttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctac 29063911 Query: 577 tgg 579 ||| Sbjct: 29063912 tgg 29063914 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Plus Query: 321 gttttatgcaggatatggttaccatgctaataattttgagcaaacgtaccgctgctatcc 380 |||||||||||||||||| ||||||| | ||| ||||||||||| ||||| || ||||| Sbjct: 29063378 gttttatgcaggatatggctaccatgggagtaactttgagcaaacataccgttgttatcc 29063437 Query: 381 agcatccttttttgacaag 399 |||||| || ||||||||| Sbjct: 29063438 agcatctttctttgacaag 29063456 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1135 cgccagaaaacaggaaagcttgtgtttggttcaagtgcaagcagcaagaaaga 1187 ||||||||| ||||||||||||| || ||||||||||||| || ||| ||||| Sbjct: 29065369 cgccagaaatcaggaaagcttgttttcggttcaagtgcaaacaacaacaaaga 29065421 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 1226 ctccgaagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagc 1285 |||| |||||||| || || |||||| | || || | ||||||||||||||||||||| | Sbjct: 29065881 ctccaaagaaggacgagcccaagttccaagcatttagtgggaagagctactccttgaaac 29065940 Query: 1286 gttagctg 1293 |||||||| Sbjct: 29065941 gttagctg 29065948 Score = 50.1 bits (25), Expect = 0.023 Identities = 55/65 (84%) Strand = Plus / Plus Query: 946 gctaatgttgaagatgaaccaaagttcaaaccattcactggttcaggaaaacggttggat 1005 ||||| ||||||||||||| || ||||| || || |||||||| ||||| ||| ||||| Sbjct: 29065183 gctaaagttgaagatgaactgaaattcaagccgtttactggttctggaaagcggctggat 29065242 Query: 1006 ggtaa 1010 ||||| Sbjct: 29065243 ggtaa 29065247
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 232 bits (117), Expect = 3e-57 Identities = 165/181 (91%) Strand = Plus / Plus Query: 713 tggagaaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagctt 772 |||||||||| |||||||| || ||||| ||||||| ||||| || ||||||||||||| Sbjct: 130898 tggagaaaacactaagaaagttgtcttgtataaccaccggcgatagtatcatggtagctt 130957 Query: 773 acaacaacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagca 832 ||||||||||||| || || ||||| ||||||||| ||||||||||||| |||||||| | Sbjct: 130958 acaacaacaaacaatactacattgacattgttgaaacaaaacctgcttccgcagttagta 131017 Query: 833 ttattgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaa 892 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131018 ttattgagacggactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaa 131077 Query: 893 a 893 | Sbjct: 131078 a 131078 Score = 123 bits (62), Expect = 2e-24 Identities = 92/102 (90%) Strand = Plus / Plus Query: 579 gatgatgcaaaacatgcttcttcaagagggtgacattgtgcgtgtcaagaatgctactct 638 ||||||||||||||||||||||||||||||||||| ||| ||||| || ||| | || || Sbjct: 130668 gatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaaccct 130727 Query: 639 tcccaagggtacatatgtgaagctgcagcctcacacgactga 680 |||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 130728 tcccaagggtacatatgtcaagttgcagcctcacacaactga 130769 Score = 93.7 bits (47), Expect = 2e-15 Identities = 104/123 (84%) Strand = Plus / Plus Query: 457 gcttccctgcacattgagtatcctatgctatttgaactgcacaatggtgtcaccgacagg 516 ||||| ||||||||||| ||||||||||| ||||| |||| |||| || || | || Sbjct: 130446 gcttctctgcacattgaatatcctatgctgtttgagttgcataatgatgcaactcagcgg 130505 Query: 517 atttcacactgtggtgtattggagtttgtagcagaagaagggttgatcatcatgccctac 576 ||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 130506 atttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctac 130565 Query: 577 tgg 579 ||| Sbjct: 130566 tgg 130568 Score = 77.8 bits (39), Expect = 1e-10 Identities = 69/79 (87%) Strand = Plus / Plus Query: 321 gttttatgcaggatatggttaccatgctaataattttgagcaaacgtaccgctgctatcc 380 |||||||||||||||||| ||||||| | ||| ||||||||||| ||||| || ||||| Sbjct: 130032 gttttatgcaggatatggctaccatgggagtaactttgagcaaacataccgttgttatcc 130091 Query: 381 agcatccttttttgacaag 399 |||||| || ||||||||| Sbjct: 130092 agcatctttctttgacaag 130110 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1135 cgccagaaaacaggaaagcttgtgtttggttcaagtgcaagcagcaagaaaga 1187 ||||||||| ||||||||||||| || ||||||||||||| || ||| ||||| Sbjct: 132023 cgccagaaatcaggaaagcttgttttcggttcaagtgcaaacaacaacaaaga 132075 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 1226 ctccgaagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagc 1285 |||| |||||||| || || |||||| | || || | ||||||||||||||||||||| | Sbjct: 132535 ctccaaagaaggacgagcccaagttccaagcatttagtgggaagagctactccttgaaac 132594 Query: 1286 gttagctg 1293 |||||||| Sbjct: 132595 gttagctg 132602 Score = 50.1 bits (25), Expect = 0.023 Identities = 55/65 (84%) Strand = Plus / Plus Query: 946 gctaatgttgaagatgaaccaaagttcaaaccattcactggttcaggaaaacggttggat 1005 ||||| ||||||||||||| || ||||| || || |||||||| ||||| ||| ||||| Sbjct: 131837 gctaaagttgaagatgaactgaaattcaagccgtttactggttctggaaagcggctggat 131896 Query: 1006 ggtaa 1010 ||||| Sbjct: 131897 ggtaa 131901
>gb|DQ191648.1| Solanum tuberosum unknown mRNA Length = 1244 Score = 165 bits (83), Expect = 6e-37 Identities = 215/259 (83%) Strand = Plus / Plus Query: 634 actcttcccaagggtacatatgtgaagctgcagcctcacacgactgatttcctagacatc 693 |||||||| ||||||| |||||| |||||||| || ||||||| ||||| || || || Sbjct: 417 actcttcctaagggtaaatatgttaagctgcaaccccacacgaaggattttctggatatt 476 Query: 694 tccaaccccaaagccatcttggagaaaactctaagaaacttctcttgcttaaccacgggc 753 || ||||| || ||||||||||||| || || ||||||||||| ||||||||||| || Sbjct: 477 tctaacccgaaggccatcttggagacgacactcagaaacttctcctgcttaaccacagga 536 Query: 754 gacagcatcatggtagcttacaacaacaaacagtattatattgatattgttgaagcaaaa 813 || || || ||||| ||||||||||| ||| | |||||||| |||||||| || | ||| Sbjct: 537 gatagtattatggtggcttacaacaataaaaaatattatatagatattgtggagaccaaa 596 Query: 814 cctgcttctgcagttagcattattgagacagactgtgaagtggactttgcacctcctctt 873 ||| || || | | || ||||||||||||||||||||||| |||||||| || || ||| Sbjct: 597 ccttctaatggaataagtattattgagacagactgtgaagtagactttgctcccccactt 656 Query: 874 gattacaaagaacctgaaa 892 ||||||||||||||||||| Sbjct: 657 gattacaaagaacctgaaa 675
>gb|DQ235202.1| Solanum tuberosum clone 171H05 ubiquitin fusion-degradation protein-like mRNA, complete cds Length = 1238 Score = 157 bits (79), Expect = 1e-34 Identities = 214/259 (82%) Strand = Plus / Plus Query: 634 actcttcccaagggtacatatgtgaagctgcagcctcacacgactgatttcctagacatc 693 |||||||| ||||||| |||||| ||||| || || || |||| ||||| || || || Sbjct: 389 actcttcctaagggtaaatatgtcaagctacaaccccatacgaaggattttctggatatt 448 Query: 694 tccaaccccaaagccatcttggagaaaactctaagaaacttctcttgcttaaccacgggc 753 || ||||| || ||||||||||||| ||| || |||||||| || ||||||||||| || Sbjct: 449 tctaacccaaaggccatcttggagacaacactcagaaacttttcctgcttaaccacagga 508 Query: 754 gacagcatcatggtagcttacaacaacaaacagtattatattgatattgttgaagcaaaa 813 || ||||||||||| |||||||| || ||| | |||||||| || ||||| ||| | ||| Sbjct: 509 gatagcatcatggtggcttacaataataaaaaatattatatagacattgtggaaaccaaa 568 Query: 814 cctgcttctgcagttagcattattgagacagactgtgaagtggactttgcacctcctctt 873 ||| || |||| | || ||||||||||| || |||||||| |||||||| ||||| ||| Sbjct: 569 ccttctaatgcaataagtattattgagaccgattgtgaagtagactttgctcctccactt 628 Query: 874 gattacaaagaacctgaaa 892 ||||||||||||||||||| Sbjct: 629 gattacaaagaacctgaaa 647 Score = 61.9 bits (31), Expect = 6e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 367 taccgctgctatccagcatccttttttgacaagccacacctggaaagtggtgacaaagta 426 ||||| || ||||| ||||| || ||||||||||||| || |||| ||| |||||| | Sbjct: 122 taccggtgttatcctgcatcattcattgacaagccacaactagaaaatggagacaaaatt 181 Query: 427 ataatgccgccatctgccctggatcgtctggcttccctgcacattga 473 |||||||| || |||||||| |||||||| || || || |||||||| Sbjct: 182 ataatgcctccctctgcccttgatcgtctagcatcacttcacattga 228
>gb|BT012760.1| Lycopersicon esculentum clone 113704F, mRNA sequence Length = 1128 Score = 149 bits (75), Expect = 3e-32 Identities = 213/259 (82%) Strand = Plus / Plus Query: 634 actcttcccaagggtacatatgtgaagctgcagcctcacacgactgatttcctagacatc 693 |||||||| ||||||| |||||| |||||||| || ||||||| ||||| || || || Sbjct: 387 actcttcctaagggtaaatatgtcaagctgcaaccccacacgaaggattttctggatatt 446 Query: 694 tccaaccccaaagccatcttggagaaaactctaagaaacttctcttgcttaaccacgggc 753 || ||||| || ||||||||||||| || || |||||||| || ||||||||||| || Sbjct: 447 tctaacccgaaggccatcttggagacgacactcagaaacttttcctgcttaaccacagga 506 Query: 754 gacagcatcatggtagcttacaacaacaaacagtattatattgatattgttgaagcaaaa 813 || || || ||||| ||||||||||| ||| | || ||||| |||||||| || | ||| Sbjct: 507 gatagtattatggtggcttacaacaataaaaaatactatatagatattgtggagaccaaa 566 Query: 814 cctgcttctgcagttagcattattgagacagactgtgaagtggactttgcacctcctctt 873 ||| || || | | || ||||||||||||||||||||||| |||||||| || || ||| Sbjct: 567 ccttctaatggaataagtattattgagacagactgtgaagtagactttgctcccccactt 626 Query: 874 gattacaaagaacctgaaa 892 ||||||||||||||||||| Sbjct: 627 gattacaaagaacctgaaa 645
>gb|BT016689.1| Zea mays clone Contig522 mRNA sequence Length = 1379 Score = 111 bits (56), Expect = 7e-21 Identities = 371/476 (77%) Strand = Plus / Plus Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 ||||||||| | |||||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 247 ggtgacaaaattataatgccaccatcagctcttgatcgtcttgcatctctgcatattgaa 306 Query: 475 tatcctatgctatttgaactgcacaatggtgtcaccgacaggatttcacactgtggtgta 534 || ||||||||||||||| | ||||||| | | || ||| ||| || |||||||| Sbjct: 307 taccctatgctatttgaagtccacaatgcagcagcagaacggacttcgcattgtggtgtt 366 Query: 535 ttggagtttgtagcagaagaagggttgatcatcatgccctactggatgatgcaaaacatg 594 ||||||| | ||||||||||| ||||| |||||| || |||||||||||||| | Sbjct: 367 ctggagttcattgcagaagaaggcatgatctacatgccatattggatgatgcaaaatctt 426 Query: 595 cttcttcaagagggtgacattgtgcgtgtcaagaatgctactcttcccaagggtacatat 654 ||| | |||||||| || || ||| | || ||||| | || |||||||| |||||| Sbjct: 427 cttttgcaagagggagatatggtgttcataaaaaatgccaacctccccaagggcacatat 486 Query: 655 gtgaagctgcagcctcacacgactgatttcctagacatctccaaccccaaagccatcttg 714 |||||| |||||||||| || || || || ||||| || || ||||||||||| |||||| Sbjct: 487 gtgaagttgcagcctcatacaacagactttctagatatttcaaaccccaaagcaatcttg 546 Query: 715 gagaaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagcttac 774 ||||||||| | | ||||| ||||| |||| || || |||||||| ||||| || || Sbjct: 547 gagaaaactttgcggaacttttcttgtctaactacaggtgacagcattatggttgcatat 606 Query: 775 aacaacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagcatt 834 || ||||| |||| || |||||||| || || ||||||| | ||| | || ||| Sbjct: 607 aataacaagaagtactacattgatatagtggagacaaaaccctccaatgctataagtatt 666 Query: 835 attgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctga 890 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| Sbjct: 667 attgagaccgattgtgaggttgactttgctccaccacttgactacaaagaacctga 722 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 954 tgaagatgaaccaaagttcaaaccattcactggttcaggaaaacggttggatgg 1007 |||||| ||||||||||||| || |||||||||||||||| || |||||||| Sbjct: 777 tgaagaagaaccaaagttcatccccttcactggttcaggaaggcgcttggatgg 830
>ref|NM_001052630.1| Oryza sativa (japonica cultivar-group) Os02g0181800 (Os02g0181800) mRNA, complete cds Length = 1396 Score = 107 bits (54), Expect = 1e-19 Identities = 195/242 (80%) Strand = Plus / Plus Query: 649 acatatgtgaagctgcagcctcacacgactgatttcctagacatctccaaccccaaagcc 708 |||||||||||||||||||||||||| || || ||| ||||||| || ||||| ||||| Sbjct: 542 acatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaacccaaaagca 601 Query: 709 atcttggagaaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggta 768 |||||||||||||| | | || | |||||| ||||||| || |||||||| |||||| Sbjct: 602 atcttggagaaaacattgcggaattactcttgtctaaccactggtgacagcattatggta 661 Query: 769 gcttacaacaacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagtt 828 || || || ||||| | || || |||||||| || ||| |||| ||| | ||| | Sbjct: 662 gcatataataacaagaaatactacattgatatagtggaaacaaagccttccaatgctatc 721 Query: 829 agcattattgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacct 888 || ||||||||||| ||||||||||| |||||||| || || ||||| || ||||||||| Sbjct: 722 agtattattgagaccgactgtgaagtcgactttgctccaccacttgactataaagaacct 781 Query: 889 ga 890 || Sbjct: 782 ga 783 Score = 93.7 bits (47), Expect = 2e-15 Identities = 161/199 (80%) Strand = Plus / Plus Query: 392 ttgacaagccacacctggaaagtggtgacaaagtaataatgccgccatctgccctggatc 451 |||||||||| || || |||| |||||||||| | || ||||| || ||||| ||||||| Sbjct: 285 ttgacaagcctcagcttgaaactggtgacaaaattattatgccaccttctgctctggatc 344 Query: 452 gtctggcttccctgcacattgagtatcctatgctatttgaactgcacaatggtgtcaccg 511 |||| || || ||||| ||||| |||||||||||||||||| | ||||| | | | | Sbjct: 345 gtctagcatctctgcatattgaatatcctatgctatttgaagtccacaacgcggcagcag 404 Query: 512 acaggatttcacactgtggtgtattggagtttgtagcagaagaagggttgatcatcatgc 571 | ||| ||||||||||||||| ||||||| | ||||||||||| ||||| ||||| Sbjct: 405 aacggacttcacactgtggtgtcctggagttcattgcagaagaaggcatgatctacatgc 464 Query: 572 cctactggatgatgcaaaa 590 | || |||||||||||||| Sbjct: 465 catattggatgatgcaaaa 483
>dbj|AK121784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A11, full insert sequence Length = 1398 Score = 107 bits (54), Expect = 1e-19 Identities = 195/242 (80%) Strand = Plus / Plus Query: 649 acatatgtgaagctgcagcctcacacgactgatttcctagacatctccaaccccaaagcc 708 |||||||||||||||||||||||||| || || ||| ||||||| || ||||| ||||| Sbjct: 544 acatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaacccaaaagca 603 Query: 709 atcttggagaaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggta 768 |||||||||||||| | | || | |||||| ||||||| || |||||||| |||||| Sbjct: 604 atcttggagaaaacattgcggaattactcttgtctaaccactggtgacagcattatggta 663 Query: 769 gcttacaacaacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagtt 828 || || || ||||| | || || |||||||| || ||| |||| ||| | ||| | Sbjct: 664 gcatataataacaagaaatactacattgatatagtggaaacaaagccttccaatgctatc 723 Query: 829 agcattattgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacct 888 || ||||||||||| ||||||||||| |||||||| || || ||||| || ||||||||| Sbjct: 724 agtattattgagaccgactgtgaagtcgactttgctccaccacttgactataaagaacct 783 Query: 889 ga 890 || Sbjct: 784 ga 785 Score = 93.7 bits (47), Expect = 2e-15 Identities = 161/199 (80%) Strand = Plus / Plus Query: 392 ttgacaagccacacctggaaagtggtgacaaagtaataatgccgccatctgccctggatc 451 |||||||||| || || |||| |||||||||| | || ||||| || ||||| ||||||| Sbjct: 287 ttgacaagcctcagcttgaaactggtgacaaaattattatgccaccttctgctctggatc 346 Query: 452 gtctggcttccctgcacattgagtatcctatgctatttgaactgcacaatggtgtcaccg 511 |||| || || ||||| ||||| |||||||||||||||||| | ||||| | | | | Sbjct: 347 gtctagcatctctgcatattgaatatcctatgctatttgaagtccacaacgcggcagcag 406 Query: 512 acaggatttcacactgtggtgtattggagtttgtagcagaagaagggttgatcatcatgc 571 | ||| ||||||||||||||| ||||||| | ||||||||||| ||||| ||||| Sbjct: 407 aacggacttcacactgtggtgtcctggagttcattgcagaagaaggcatgatctacatgc 466 Query: 572 cctactggatgatgcaaaa 590 | || |||||||||||||| Sbjct: 467 catattggatgatgcaaaa 485
>ref|NM_201828.1| Arabidopsis thaliana unknown protein (AT2G29070) mRNA, complete cds Length = 1086 Score = 93.7 bits (47), Expect = 2e-15 Identities = 194/243 (79%) Strand = Plus / Plus Query: 658 aagctgcagcctcacacgactgatttcctagacatctccaaccccaaagccatcttggag 717 ||||||||||||||||| |||||| | || || |||||||| ||||||||||||||| Sbjct: 427 aagctgcagcctcacactcaagatttcttggatatttccaacccaaaagccatcttggag 486 Query: 718 aaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagcttacaac 777 | || || || | | |||||||||||||||||| || | || ||||| | || ||| Sbjct: 487 actacgcttaggagttactcttgcttaaccacgggtgatacaattatggttccgtataac 546 Query: 778 aacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagcattatt 837 ||||| || ||||| || || | ||||| ||||||||| |||| || || || ||||| Sbjct: 547 aacaagcaatattacatcaatgtggttgaggcaaaaccttcttcagctgtgagtattatc 606 Query: 838 gagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaaaacca 897 || || || ||||| || || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 607 gaaacggattgtgaggttgattttgctcctcctcttgattacaaagaacctgagaagcca 666 Query: 898 cag 900 ||| Sbjct: 667 cag 669
>ref|NM_128464.2| Arabidopsis thaliana unknown protein (AT2G29070) mRNA, complete cds Length = 1169 Score = 93.7 bits (47), Expect = 2e-15 Identities = 194/243 (79%) Strand = Plus / Plus Query: 658 aagctgcagcctcacacgactgatttcctagacatctccaaccccaaagccatcttggag 717 ||||||||||||||||| |||||| | || || |||||||| ||||||||||||||| Sbjct: 510 aagctgcagcctcacactcaagatttcttggatatttccaacccaaaagccatcttggag 569 Query: 718 aaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagcttacaac 777 | || || || | | |||||||||||||||||| || | || ||||| | || ||| Sbjct: 570 actacgcttaggagttactcttgcttaaccacgggtgatacaattatggttccgtataac 629 Query: 778 aacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagcattatt 837 ||||| || ||||| || || | ||||| ||||||||| |||| || || || ||||| Sbjct: 630 aacaagcaatattacatcaatgtggttgaggcaaaaccttcttcagctgtgagtattatc 689 Query: 838 gagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaaaacca 897 || || || ||||| || || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 690 gaaacggattgtgaggttgattttgctcctcctcttgattacaaagaacctgagaagcca 749 Query: 898 cag 900 ||| Sbjct: 750 cag 752
>gb|BT012260.1| Arabidopsis thaliana At2g29070 gene, complete cds Length = 939 Score = 93.7 bits (47), Expect = 2e-15 Identities = 194/243 (79%) Strand = Plus / Plus Query: 658 aagctgcagcctcacacgactgatttcctagacatctccaaccccaaagccatcttggag 717 ||||||||||||||||| |||||| | || || |||||||| ||||||||||||||| Sbjct: 325 aagctgcagcctcacactcaagatttcttggatatttccaacccaaaagccatcttggag 384 Query: 718 aaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagcttacaac 777 | || || || | | |||||||||||||||||| || | || ||||| | || ||| Sbjct: 385 actacgcttaggagttactcttgcttaaccacgggtgatacaattatggttccgtataac 444 Query: 778 aacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagcattatt 837 ||||| || ||||| || || | ||||| ||||||||| |||| || || || ||||| Sbjct: 445 aacaagcaatattacatcaatgtggttgaggcaaaaccttcttcagctgtgagtattatc 504 Query: 838 gagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaaaacca 897 || || || ||||| || || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 505 gaaacggattgtgaggttgattttgctcctcctcttgattacaaagaacctgagaagcca 564 Query: 898 cag 900 ||| Sbjct: 565 cag 567
>gb|BT011682.1| Arabidopsis thaliana At2g29070 gene, complete cds Length = 1145 Score = 93.7 bits (47), Expect = 2e-15 Identities = 194/243 (79%) Strand = Plus / Plus Query: 658 aagctgcagcctcacacgactgatttcctagacatctccaaccccaaagccatcttggag 717 ||||||||||||||||| |||||| | || || |||||||| ||||||||||||||| Sbjct: 407 aagctgcagcctcacactcaagatttcttggatatttccaacccaaaagccatcttggag 466 Query: 718 aaaactctaagaaacttctcttgcttaaccacgggcgacagcatcatggtagcttacaac 777 | || || || | | |||||||||||||||||| || | || ||||| | || ||| Sbjct: 467 actacgcttaggagttactcttgcttaaccacgggtgatacaattatggttccgtataac 526 Query: 778 aacaaacagtattatattgatattgttgaagcaaaacctgcttctgcagttagcattatt 837 ||||| || ||||| || || | ||||| ||||||||| |||| || || || ||||| Sbjct: 527 aacaagcaatattacatcaatgtggttgaggcaaaaccttcttcagctgtgagtattatc 586 Query: 838 gagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaaaacca 897 || || || ||||| || || ||||| |||||||||||||||||||||||||| || ||| Sbjct: 587 gaaacggattgtgaggttgattttgctcctcctcttgattacaaagaacctgagaagcca 646 Query: 898 cag 900 ||| Sbjct: 647 cag 649
>gb|AY535070.1| Beta vulgaris SNP marker MP0001 genomic sequence Length = 833 Score = 87.7 bits (44), Expect = 1e-13 Identities = 113/136 (83%) Strand = Plus / Plus Query: 757 agcatcatggtagcttacaacaacaaacagtattatattgatattgttgaagcaaaacct 816 ||||||||||| ||||| || ||||| |||| || ||||| ||||| ||| |||| || Sbjct: 53 agcatcatggtggcttataataacaagaagtactacattgacattgtggaaacaaagccc 112 Query: 817 gcttctgcagttagcattattgagacagactgtgaagtggactttgcacctcctcttgat 876 || |||| |||| |||||||||||||| ||||| || || ||||| |||||||||||| Sbjct: 113 tctaatgcaattagtattattgagacagattgtgaggtcgattttgcccctcctcttgat 172 Query: 877 tacaaagaacctgaaa 892 || ||||||||||||| Sbjct: 173 tataaagaacctgaaa 188
>gb|AY587885.1| Triticum aestivum ubiquitin fusion degradation protein (UFD1) mRNA, complete cds Length = 1135 Score = 85.7 bits (43), Expect = 4e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 354 ttttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaag 413 ||||||||| || || |||||||| || ||||| ||| ||||||||||||| || ||| Sbjct: 172 ttttgagcagacctatcgctgctaccctgcatcttttattgacaagccacagcttgaatc 231 Query: 414 tggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattga 473 |||||||||| | || ||||| || || || || |||||||| || || ||||| ||||| Sbjct: 232 tggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 291 Query: 474 gtatcctatgctatttgaa 492 ||| ||||||||||||||| Sbjct: 292 gtaccctatgctatttgaa 310 Score = 79.8 bits (40), Expect = 3e-11 Identities = 196/248 (79%) Strand = Plus / Plus Query: 643 aagggtacatatgtgaagctgcagcctcacacgactgatttcctagacatctccaacccc 702 ||||| ||||||||||||||||||||||| || ||||| ||| | ||||| || || ||| Sbjct: 461 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatccc 520 Query: 703 aaagccatcttggagaaaactctaagaaacttctcttgcttaaccacgggcgacagcatc 762 ||||| |||||||| | ||| | | |||| |||||| ||||||| || |||||||| Sbjct: 521 aaagcaatcttggaagagactttgcggaactactcttgtctaaccactggtgacagcatt 580 Query: 763 atggtagcttacaacaacaaacagtattatattgatattgttgaagcaaaacctgcttct 822 ||||| || || || ||||| ||| || |||||||| |||||| |||| ||||| | Sbjct: 581 atggtggcatataataacaaggggtactacattgatatagttgaaacaaagcctgccagt 640 Query: 823 gcagttagcattattgagacagactgtgaagtggactttgcacctcctcttgattacaaa 882 || | || || |||||||| || ||||| || |||||||| || || ||||| || ||| Sbjct: 641 gctataagtataattgagactgattgtgaggttgactttgccccaccacttgactataaa 700 Query: 883 gaacctga 890 |||||||| Sbjct: 701 gaacctga 708 Score = 48.1 bits (24), Expect = 0.092 Identities = 60/72 (83%) Strand = Plus / Plus Query: 519 ttcacactgtggtgtattggagtttgtagcagaagaagggttgatcatcatgccctactg 578 ||||||||||||||| | ||||| | ||||||||||| ||||| |||||| ||||| Sbjct: 337 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 396 Query: 579 gatgatgcaaaa 590 | |||||||||| Sbjct: 397 ggtgatgcaaaa 408
>gb|AY112612.1| Zea mays CL14668_1 mRNA sequence Length = 1298 Score = 85.7 bits (43), Expect = 4e-13 Identities = 199/251 (79%) Strand = Plus / Plus Query: 640 cccaagggtacatatgtgaagctgcagcctcacacgactgatttcctagacatctccaac 699 |||||||| |||||||||||| |||||||||| || || || || ||||| || || ||| Sbjct: 440 cccaagggcacatatgtgaagttgcagcctcatacaacagactttctagatatttcaaac 499 Query: 700 cccaaagccatcttggagaaaactctaagaaacttctcttgcttaaccacgggcgacagc 759 |||||||| ||||||||||||||| | | ||||| ||||| |||| || || |||||| Sbjct: 500 cccaaagcaatcttggagaaaactttgcggaacttttcttgtctaactacaggtgacagc 559 Query: 760 atcatggtagcttacaacaacaaacagtattatattgatattgttgaagcaaaacctgct 819 || ||||| || || || ||||| |||| || |||||||| || || |||| || | Sbjct: 560 attatggttgcatataataacaagaagtactacattgatatagtagagacaaagccctcc 619 Query: 820 tctgcagttagcattattgagacagactgtgaagtggactttgcacctcctcttgattac 879 ||| | || ||||||||||| || ||||| || |||||||| || || ||||| ||| Sbjct: 620 aatgctataagtattattgagaccgattgtgaggttgactttgctccaccacttgactac 679 Query: 880 aaagaacctga 890 ||||||||||| Sbjct: 680 aaagaacctga 690 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 ||||||||| | |||||||| ||||| || || |||||||| || || ||||| ||||| Sbjct: 214 ggtgacaaaattataatgccaccatcagctcttgatcgtcttgcatctctgcatattgaa 273 Query: 475 tatcctatgctatttgaactgcacaatg 502 || ||||||||||||||| | ||||||| Sbjct: 274 taccctatgctatttgaagtccacaatg 301 Score = 52.0 bits (26), Expect = 0.006 Identities = 47/54 (87%) Strand = Plus / Plus Query: 954 tgaagatgaaccaaagttcaaaccattcactggttcaggaaaacggttggatgg 1007 |||||| ||||||||||||| || |||||||||||||||| || |||||||| Sbjct: 745 tgaagaagaaccaaagttcatccccttcactggttcaggaaggcgcttggatgg 798
>gb|AY087347.1| Arabidopsis thaliana clone 34470 mRNA, complete sequence Length = 1201 Score = 81.8 bits (41), Expect = 7e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 367 taccgctgctatccagcatccttttttgacaagccacacctggaaagtggtgacaaagta 426 ||||| || ||||| ||||| ||| ||||||||||||| || |||||||||||||| | Sbjct: 147 taccggtgttatccggcatcttttattgacaagccacaacttgaaagtggtgacaagatt 206 Query: 427 ataatgccgccatctgccctggatcgtctggcttccctgcacattgagtatcctatgcta 486 |||||||| ||||| ||||| |||||||| || || |||| ||||| ||||| ||||| Sbjct: 207 ataatgccaccatcagcccttgatcgtctagcctctttgcatattgactatccgatgctg 266 Query: 487 tttga 491 ||||| Sbjct: 267 tttga 271 Score = 63.9 bits (32), Expect = 2e-06 Identities = 122/152 (80%) Strand = Plus / Plus Query: 567 catgccctactggatgatgcaaaacatgcttcttcaagagggtgacattgtgcgtgtcaa 626 |||||| || |||||||||||||| |||| || ||||| || ||||||||| | || | Sbjct: 347 catgccatattggatgatgcaaaatctgctgctgcaagaaggagacattgtgagagttag 406 Query: 627 gaatgctactcttcccaagggtacatatgtgaagctgcagcctcacacgactgatttcct 686 |||| |||||||| ||||| || || || || || ||||| ||||| || || ||||| Sbjct: 407 aaatgtcactcttccaaagggaacttacgttaaactacagccccacacaacagacttcct 466 Query: 687 agacatctccaaccccaaagccatcttggaga 718 || || |||||||| |||||||||||||||| Sbjct: 467 ggatatatccaacccgaaagccatcttggaga 498
>ref|NM_202980.1| Arabidopsis thaliana unknown protein (AT4G38930) mRNA, complete cds Length = 1177 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 355 tttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaagt 414 |||||||| || ||||| || ||||| |||||||| |||| ||||| || | |||||| Sbjct: 106 tttgagcagacttaccggtgttatccctcatcctttattgataagcctcaaattgaaagt 165 Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 |||||||| | |||||||| ||||| ||||| |||||||| ||||| |||| ||||| Sbjct: 166 ggtgacaagattataatgccaccatcagcccttgatcgtctagcttctttgcagattgat 225 Query: 475 tatcctatgctatttgaact 494 ||||| ||||| |||||||| Sbjct: 226 tatccaatgctctttgaact 245
>ref|NM_120053.2| Arabidopsis thaliana unknown protein (AT4G38930) mRNA, complete cds Length = 1202 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 355 tttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaagt 414 |||||||| || ||||| || ||||| |||||||| |||| ||||| || | |||||| Sbjct: 126 tttgagcagacttaccggtgttatccctcatcctttattgataagcctcaaattgaaagt 185 Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 |||||||| | |||||||| ||||| ||||| |||||||| ||||| |||| ||||| Sbjct: 186 ggtgacaagattataatgccaccatcagcccttgatcgtctagcttctttgcagattgat 245 Query: 475 tatcctatgctatttgaact 494 ||||| ||||| |||||||| Sbjct: 246 tatccaatgctctttgaact 265
>gb|AY132013.1| Arabidopsis thaliana AT4g38930/F19H22_30 mRNA, complete cds Length = 936 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 355 tttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaagt 414 |||||||| || ||||| || ||||| |||||||| |||| ||||| || | |||||| Sbjct: 37 tttgagcagacttaccggtgttatccctcatcctttattgataagcctcaaattgaaagt 96 Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 |||||||| | |||||||| ||||| ||||| |||||||| ||||| |||| ||||| Sbjct: 97 ggtgacaagattataatgccaccatcagcccttgatcgtctagcttctttgcagattgat 156 Query: 475 tatcctatgctatttgaact 494 ||||| ||||| |||||||| Sbjct: 157 tatccaatgctctttgaact 176
>dbj|AK221534.1| Arabidopsis thaliana mRNA for putative ubiquitin-dependent proteolytic protein, complete cds, clone: RAFL07-69-M16 Length = 1195 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 355 tttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaagt 414 |||||||| || ||||| || ||||| |||||||| |||| ||||| || | |||||| Sbjct: 126 tttgagcagacttaccggtgttatccctcatcctttattgataagcctcaaattgaaagt 185 Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 |||||||| | |||||||| ||||| ||||| |||||||| ||||| |||| ||||| Sbjct: 186 ggtgacaagattataatgccaccatcagcccttgatcgtctagcttctttgcagattgat 245 Query: 475 tatcctatgctatttgaact 494 ||||| ||||| |||||||| Sbjct: 246 tatccaatgctctttgaact 265
>gb|AF419602.1|AF419602 Arabidopsis thaliana AT4g38930/F19H22_30 mRNA, complete cds Length = 1222 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 355 tttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaagt 414 |||||||| || ||||| || ||||| |||||||| |||| ||||| || | |||||| Sbjct: 126 tttgagcagacttaccggtgttatccctcatcctttattgataagcctcaaattgaaagt 185 Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 |||||||| | |||||||| ||||| ||||| |||||||| ||||| |||| ||||| Sbjct: 186 ggtgacaagattataatgccaccatcagcccttgatcgtctagcttctttgcagattgat 245 Query: 475 tatcctatgctatttgaact 494 ||||| ||||| |||||||| Sbjct: 246 tatccaatgctctttgaact 265
>emb|BX827766.1|CNS0A4F5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1061 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 355 tttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaagt 414 |||||||| || ||||| || ||||| |||||||| |||| ||||| || | |||||| Sbjct: 106 tttgagcagacttaccggtgttatccctcatcctttattgataagcctcaaattgaaagt 165 Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 |||||||| | |||||||| ||||| ||||| |||||||| ||||| |||| ||||| Sbjct: 166 ggtgacaagattataatgccaccatcagcccttgatcgtctagcttctttgcagattgat 225 Query: 475 tatcctatgctatttgaact 494 ||||| ||||| |||||||| Sbjct: 226 tatccaatgctctttgaact 245
>emb|BX826549.1|CNS0A4GV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1068 Score = 79.8 bits (40), Expect = 3e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 355 tttgagcaaacgtaccgctgctatccagcatccttttttgacaagccacacctggaaagt 414 |||||||| || ||||| || ||||| |||||||| |||| ||||| || | |||||| Sbjct: 106 tttgagcagacttaccggtgttatccctcatcctttattgataagcctcaaattgaaagt 165 Query: 415 ggtgacaaagtaataatgccgccatctgccctggatcgtctggcttccctgcacattgag 474 |||||||| | |||||||| ||||| ||||| |||||||| ||||| |||| ||||| Sbjct: 166 ggtgacaagattataatgccaccatcagcccttgatcgtctagcttctttgcagattgat 225 Query: 475 tatcctatgctatttgaact 494 ||||| ||||| |||||||| Sbjct: 226 tatccaatgctctttgaact 245
>gb|AC005315.3| Arabidopsis thaliana chromosome 2 clone T9I4 map mi54, complete sequence Length = 108393 Score = 75.8 bits (38), Expect = 4e-10 Identities = 134/166 (80%) Strand = Plus / Plus Query: 735 ctcttgcttaaccacgggcgacagcatcatggtagcttacaacaacaaacagtattatat 794 |||||||||||||||||| || | || ||||| | || |||||||| || ||||| || Sbjct: 68334 ctcttgcttaaccacgggtgatacaattatggttccgtataacaacaagcaatattacat 68393 Query: 795 tgatattgttgaagcaaaacctgcttctgcagttagcattattgagacagactgtgaagt 854 || | ||||| ||||||||| |||| || || || ||||| || || || ||||| || Sbjct: 68394 caatgtggttgaggcaaaaccttcttcagctgtgagtattatcgaaacggattgtgaggt 68453 Query: 855 ggactttgcacctcctcttgattacaaagaacctgaaaaaccacag 900 || ||||| |||||||||||||||||||||||||| || |||||| Sbjct: 68454 tgattttgctcctcctcttgattacaaagaacctgagaagccacag 68499
>dbj|AK226526.1| Arabidopsis thaliana mRNA for putative ubiquitin fusion-degradation protein, complete cds, clone: RAFL06-89-A08 Length = 1216 Score = 73.8 bits (37), Expect = 2e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 367 taccgctgctatccagcatccttttttgacaagccacacctggaaagtggtgacaaagta 426 ||||| || ||||| ||||| ||| | ||||||||||| || |||||||||||||| | Sbjct: 152 taccggtgttatccggcatcttttatcgacaagccacaacttgaaagtggtgacaagatt 211 Query: 427 ataatgccgccatctgccctggatcgtctggcttccctgcacattgagtatcctatgcta 486 |||||||| ||||| ||||| |||||||| || || |||| ||||| ||||| ||||| Sbjct: 212 ataatgccaccatcagcccttgatcgtctagcctctttgcatattgactatccgatgctg 271 Query: 487 tttga 491 ||||| Sbjct: 272 tttga 276 Score = 56.0 bits (28), Expect = 4e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 567 catgccctactggatgatgcaaaacatgcttcttcaagagggtgacattgtgcgtgtcaa 626 |||||| || ||||||||||| || |||| || ||||| || ||||||||| | || | Sbjct: 352 catgccatattggatgatgcagaatctgctgctgcaagaaggagacattgtgagagttag 411 Query: 627 gaatgctactcttcccaagggtacatatgtgaagctgcagcctcacacgactgatttcct 686 |||| |||||||| ||||| || || || || || ||||| ||||| || || ||||| Sbjct: 412 aaatgtcactcttccaaagggaacttacgttaaactacagccccacacaacagacttcct 471 Query: 687 agacatctccaaccccaaagccatcttggaga 718 || || |||||||| |||||||||||||||| Sbjct: 472 ggatatatccaacccgaaagccatcttggaga 503
>ref|NM_001036307.1| Arabidopsis thaliana unknown protein (AT2G21270) mRNA, complete cds Length = 1716 Score = 73.8 bits (37), Expect = 2e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 367 taccgctgctatccagcatccttttttgacaagccacacctggaaagtggtgacaaagta 426 ||||| || ||||| ||||| ||| | ||||||||||| || |||||||||||||| | Sbjct: 556 taccggtgttatccggcatcttttatcgacaagccacaacttgaaagtggtgacaagatt 615 Query: 427 ataatgccgccatctgccctggatcgtctggcttccctgcacattgagtatcctatgcta 486 |||||||| ||||| ||||| |||||||| || || |||| ||||| ||||| ||||| Sbjct: 616 ataatgccaccatcagcccttgatcgtctagcctctttgcatattgactatccgatgctg 675 Query: 487 tttga 491 ||||| Sbjct: 676 tttga 680 Score = 56.0 bits (28), Expect = 4e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 567 catgccctactggatgatgcaaaacatgcttcttcaagagggtgacattgtgcgtgtcaa 626 |||||| || ||||||||||| || |||| || ||||| || ||||||||| | || | Sbjct: 756 catgccatattggatgatgcagaatctgctgctgcaagaaggagacattgtgagagttag 815 Query: 627 gaatgctactcttcccaagggtacatatgtgaagctgcagcctcacacgactgatttcct 686 |||| |||||||| ||||| || || || || || ||||| ||||| || || ||||| Sbjct: 816 aaatgtcactcttccaaagggaacttacgttaaactacagccccacacaacagacttcct 875 Query: 687 agacatctccaaccccaaagccatcttggaga 718 || || |||||||| |||||||||||||||| Sbjct: 876 ggatatatccaacccgaaagccatcttggaga 907
>ref|NM_127699.2| Arabidopsis thaliana unknown protein (AT2G21270) mRNA, complete cds Length = 1204 Score = 73.8 bits (37), Expect = 2e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 367 taccgctgctatccagcatccttttttgacaagccacacctggaaagtggtgacaaagta 426 ||||| || ||||| ||||| ||| | ||||||||||| || |||||||||||||| | Sbjct: 147 taccggtgttatccggcatcttttatcgacaagccacaacttgaaagtggtgacaagatt 206 Query: 427 ataatgccgccatctgccctggatcgtctggcttccctgcacattgagtatcctatgcta 486 |||||||| ||||| ||||| |||||||| || || |||| ||||| ||||| ||||| Sbjct: 207 ataatgccaccatcagcccttgatcgtctagcctctttgcatattgactatccgatgctg 266 Query: 487 tttga 491 ||||| Sbjct: 267 tttga 271 Score = 56.0 bits (28), Expect = 4e-04 Identities = 121/152 (79%) Strand = Plus / Plus Query: 567 catgccctactggatgatgcaaaacatgcttcttcaagagggtgacattgtgcgtgtcaa 626 |||||| || ||||||||||| || |||| || ||||| || ||||||||| | || | Sbjct: 347 catgccatattggatgatgcagaatctgctgctgcaagaaggagacattgtgagagttag 406 Query: 627 gaatgctactcttcccaagggtacatatgtgaagctgcagcctcacacgactgatttcct 686 |||| |||||||| ||||| || || || || || ||||| ||||| || || ||||| Sbjct: 407 aaatgtcactcttccaaagggaacttacgttaaactacagccccacacaacagacttcct 466 Query: 687 agacatctccaaccccaaagccatcttggaga 718 || || |||||||| |||||||||||||||| Sbjct: 467 ggatatatccaacccgaaagccatcttggaga 498
>emb|BX819179.1|CNS0AA8E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1551 Score = 73.8 bits (37), Expect = 2e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 367 taccgctgctatccagcatccttttttgacaagccacacctggaaagtggtgacaaagta 426 ||||| || ||||| ||||| ||| | ||||||||||| || |||||||||||||| | Sbjct: 556 taccggtgttatccggcatcttttatcgacaagccacaacttgaaagtggtgacaagatt 615 Query: 427 ataatgccgccatctgccctggatcgtctggcttccctgcacattgagtatcctatgcta 486 |||||||| ||||| ||||| |||||||| || || |||| ||||| ||||| ||||| Sbjct: 616 ataatgccaccatcagcccttgatcgtctagcctctttgcatattgactatccgatgctg 675 Query: 487 tttga 491 ||||| Sbjct: 676 tttga 680 Score = 44.1 bits (22), Expect = 1.4 Identities = 133/170 (78%) Strand = Plus / Plus Query: 547 gcagaagaagggttgatcatcatgccctactggatgatgcaaaacatgcttcttcaagag 606 ||||||||||| |||| |||||| || ||||||||||| || |||| || ||||| Sbjct: 736 gcagaagaaggcatgatttacatgccatattggatgatgcagaatctgctgctgcaagaa 795 Query: 607 ggtgacattgtgcgtgtcaagaatgctactcttcccaagggtacatatgtgaagctgcag 666 || ||||||||| | || | |||| |||||||| ||||| || || || || || ||| Sbjct: 796 ggagacattgtgagagttagaaatgtcactcttccaaagggaacttacgttaaactacag 855 Query: 667 cctcacacgactgatttcctagacatctccaaccccaaagccatcttgga 716 || ||||| || || ||||| || || |||||||| ||||||||| |||| Sbjct: 856 ccccacacaacagacttcctggatatatccaacccgaaagccatcctgga 905
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 65.9 bits (33), Expect = 4e-07 Identities = 113/137 (82%), Gaps = 2/137 (1%) Strand = Plus / Plus Query: 757 agcatcatggtagcttacaacaacaaacagtattatattgatattgttga-agcaaaacc 815 ||||| ||||| |||||||| ||||| | ||||||||||||||||| || ||||| || Sbjct: 110775 agcattatggtggcttacaataacaagaaatattatattgatattgtagagagcaag-cc 110833 Query: 816 tgcttctgcagttagcattattgagacagactgtgaagtggactttgcacctcctcttga 875 ||| ||| | ||||| |||||||| |||||||||||||||||||| || || | || Sbjct: 110834 tgccaatgctataagcatcattgagaccgactgtgaagtggactttgccccacccttaga 110893 Query: 876 ttacaaagaacctgaaa 892 |||||| |||||||||| Sbjct: 110894 ttacaaggaacctgaaa 110910
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 61.9 bits (31), Expect = 6e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 649 acatatgtgaagctgcagcctcacacgactgatttcctagacatctccaaccccaaagc 707 |||||||||||||||||||||||||| || || ||| ||||||| || ||||| ||||| Sbjct: 4565299 acatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaacccaaaagc 4565357 Score = 61.9 bits (31), Expect = 6e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 832 attattgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctga 890 ||||||||||| ||||||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 4565630 attattgagaccgactgtgaagtcgactttgctccaccacttgactataaagaacctga 4565688 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 463 ctgcacattgagtatcctatgctatttgaa 492 ||||| ||||| |||||||||||||||||| Sbjct: 4565039 ctgcatattgaatatcctatgctatttgaa 4565068
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 61.9 bits (31), Expect = 6e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 649 acatatgtgaagctgcagcctcacacgactgatttcctagacatctccaaccccaaagc 707 |||||||||||||||||||||||||| || || ||| ||||||| || ||||| ||||| Sbjct: 100678 acatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaacccaaaagc 100736 Score = 61.9 bits (31), Expect = 6e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 832 attattgagacagactgtgaagtggactttgcacctcctcttgattacaaagaacctga 890 ||||||||||| ||||||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 101009 attattgagaccgactgtgaagtcgactttgctccaccacttgactataaagaacctga 101067 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 463 ctgcacattgagtatcctatgctatttgaa 492 ||||| ||||| |||||||||||||||||| Sbjct: 100418 ctgcatattgaatatcctatgctatttgaa 100447
>gb|AC189480.1| Brassica rapa subsp. pekinensis clone KBrB082F21, complete sequence Length = 131291 Score = 58.0 bits (29), Expect = 1e-04 Identities = 119/149 (79%) Strand = Plus / Plus Query: 743 taaccacgggcgacagcatcatggtagcttacaacaacaaacagtattatattgatattg 802 ||||||| || || ||||| ||||| | |||||||| || |||| | ||| ||||| | Sbjct: 127634 taaccactggggatagcattatggttccatacaacaataagaagtactttatagatatag 127693 Query: 803 ttgaagcaaaacctgcttctgcagttagcattattgagacagactgtgaagtggactttg 862 ||||| |||| |||||| || | | ||||| || |||||||||||||| || || |||| Sbjct: 127694 ttgaaacaaagcctgctaatggaatcagcatcatagagacagactgtgaggttgattttg 127753 Query: 863 cacctcctcttgattacaaagaacctgaa 891 | ||||| ||||||||||| || |||||| Sbjct: 127754 cgcctccccttgattacaaggagcctgaa 127782 Score = 48.1 bits (24), Expect = 0.092 Identities = 42/48 (87%) Strand = Plus / Plus Query: 960 tgaaccaaagttcaaaccattcactggttcaggaaaacggttggatgg 1007 ||||||||||||||| || |||||||| || |||| |||||| ||||| Sbjct: 127938 tgaaccaaagttcaaccctttcactggatctggaagacggttagatgg 127985
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 58.0 bits (29), Expect = 1e-04 Identities = 119/149 (79%) Strand = Plus / Plus Query: 743 taaccacgggcgacagcatcatggtagcttacaacaacaaacagtattatattgatattg 802 ||||||| || || ||||| ||||| | |||||||| || |||| | ||| ||||| | Sbjct: 11963 taaccactggggatagcattatggttccatacaacaataagaagtactttatagatatag 12022 Query: 803 ttgaagcaaaacctgcttctgcagttagcattattgagacagactgtgaagtggactttg 862 ||||| |||| |||||| || | | ||||| || |||||||||||||| || || |||| Sbjct: 12023 ttgaaacaaagcctgctaatggaatcagcatcatagagacagactgtgaggttgattttg 12082 Query: 863 cacctcctcttgattacaaagaacctgaa 891 | ||||| ||||||||||| || |||||| Sbjct: 12083 cgcctccccttgattacaaggagcctgaa 12111 Score = 48.1 bits (24), Expect = 0.092 Identities = 42/48 (87%) Strand = Plus / Plus Query: 960 tgaaccaaagttcaaaccattcactggttcaggaaaacggttggatgg 1007 ||||||||||||||| || |||||||| || |||| |||||| ||||| Sbjct: 12267 tgaaccaaagttcaaccctttcactggatctggaagacggttagatgg 12314
>ref|NM_001070080.1| Oryza sativa (japonica cultivar-group) Os09g0493500 (Os09g0493500) mRNA, complete cds Length = 2835 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 956 aagatgaaccaaagttcaaaccattcactggttcaggaaaacggttggatggtaagggcc 1015 ||||||| ||| | |||| | |||||||||||||||| || || ||||||||||||| | Sbjct: 844 aagatgagccagaattcagagcattcactggttcagggaatcgtttggatggtaaggcct 903 Query: 1016 caaaac 1021 |||||| Sbjct: 904 caaaac 909 Score = 50.1 bits (25), Expect = 0.023 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1231 aagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagcgttag 1290 ||||||||||| || |||||| | || || |||||| ||||||||| ||||| |||||| Sbjct: 1119 aagaaggaagagcccaagttccaagcattttctgggacgagctactcgttgaaacgttag 1178 Query: 1291 ctgct 1295 ||||| Sbjct: 1179 ctgct 1183 Score = 48.1 bits (24), Expect = 0.092 Identities = 30/32 (93%) Strand = Plus / Plus Query: 862 gcacctcctcttgattacaaagaacctgaaaa 893 |||||||| || |||||||||||||||||||| Sbjct: 750 gcacctccactcgattacaaagaacctgaaaa 781 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 745 accacgggcgacagcatcatggtagcttacaacaacaa 782 ||||| ||||||| ||||||||| || ||||||||||| Sbjct: 633 accaccggcgacaccatcatggtggcctacaacaacaa 670
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Minus Query: 956 aagatgaaccaaagttcaaaccattcactggttcaggaaaacggttggatggtaagggcc 1015 ||||||| ||| | |||| | |||||||||||||||| || || ||||||||||||| | Sbjct: 18826075 aagatgagccagaattcagagcattcactggttcagggaatcgtttggatggtaaggcct 18826016 Query: 1016 caaaac 1021 |||||| Sbjct: 18826015 caaaac 18826010 Score = 50.1 bits (25), Expect = 0.023 Identities = 55/65 (84%) Strand = Plus / Minus Query: 1231 aagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagcgttag 1290 ||||||||||| || |||||| | || || |||||| ||||||||| ||||| |||||| Sbjct: 18825800 aagaaggaagagcccaagttccaagcattttctgggacgagctactcgttgaaacgttag 18825741 Query: 1291 ctgct 1295 ||||| Sbjct: 18825740 ctgct 18825736 Score = 48.1 bits (24), Expect = 0.092 Identities = 30/32 (93%) Strand = Plus / Minus Query: 862 gcacctcctcttgattacaaagaacctgaaaa 893 |||||||| || |||||||||||||||||||| Sbjct: 18826169 gcacctccactcgattacaaagaacctgaaaa 18826138 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Minus Query: 745 accacgggcgacagcatcatggtagcttacaacaacaa 782 ||||| ||||||| ||||||||| || ||||||||||| Sbjct: 18826286 accaccggcgacaccatcatggtggcctacaacaacaa 18826249
>dbj|AK120576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C24, full insert sequence Length = 2233 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 956 aagatgaaccaaagttcaaaccattcactggttcaggaaaacggttggatggtaagggcc 1015 ||||||| ||| | |||| | |||||||||||||||| || || ||||||||||||| | Sbjct: 1847 aagatgagccagaattcagagcattcactggttcagggaatcgtttggatggtaaggcct 1906 Query: 1016 caaaac 1021 |||||| Sbjct: 1907 caaaac 1912 Score = 50.1 bits (25), Expect = 0.023 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1231 aagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagcgttag 1290 ||||||||||| || |||||| | || || |||||| ||||||||| ||||| |||||| Sbjct: 2122 aagaaggaagagcccaagttccaagcattttctgggacgagctactcgttgaaacgttag 2181 Query: 1291 ctgct 1295 ||||| Sbjct: 2182 ctgct 2186 Score = 48.1 bits (24), Expect = 0.092 Identities = 30/32 (93%) Strand = Plus / Plus Query: 862 gcacctcctcttgattacaaagaacctgaaaa 893 |||||||| || |||||||||||||||||||| Sbjct: 1753 gcacctccactcgattacaaagaacctgaaaa 1784 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 745 accacgggcgacagcatcatggtagcttacaacaacaa 782 ||||| ||||||| ||||||||| || ||||||||||| Sbjct: 1636 accaccggcgacaccatcatggtggcctacaacaacaa 1673
>dbj|AK099770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D01, full insert sequence Length = 2836 Score = 52.0 bits (26), Expect = 0.006 Identities = 56/66 (84%) Strand = Plus / Plus Query: 956 aagatgaaccaaagttcaaaccattcactggttcaggaaaacggttggatggtaagggcc 1015 ||||||| ||| | |||| | |||||||||||||||| || || ||||||||||||| | Sbjct: 846 aagatgagccagaattcagagcattcactggttcagggaatcgtttggatggtaaggcct 905 Query: 1016 caaaac 1021 |||||| Sbjct: 906 caaaac 911 Score = 50.1 bits (25), Expect = 0.023 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1231 aagaaggaagaaccgaagttcaacgcgttcactgggaagagctactccttgaagcgttag 1290 ||||||||||| || |||||| | || || |||||| ||||||||| ||||| |||||| Sbjct: 1120 aagaaggaagagcccaagttccaagcattttctgggacgagctactcgttgaaacgttag 1179 Query: 1291 ctgct 1295 ||||| Sbjct: 1180 ctgct 1184 Score = 48.1 bits (24), Expect = 0.092 Identities = 30/32 (93%) Strand = Plus / Plus Query: 862 gcacctcctcttgattacaaagaacctgaaaa 893 |||||||| || |||||||||||||||||||| Sbjct: 752 gcacctccactcgattacaaagaacctgaaaa 783 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 745 accacgggcgacagcatcatggtagcttacaacaacaa 782 ||||| ||||||| ||||||||| || ||||||||||| Sbjct: 635 accaccggcgacaccatcatggtggcctacaacaacaa 672
>ref|XM_627931.1| Cryptosporidium parvum Iowa II DHHC family palmitoyl transferases with 4 transmembrane domains (cgd1_820), partial mRNA Length = 2295 Score = 46.1 bits (23), Expect = 0.36 Identities = 26/27 (96%) Strand = Plus / Plus Query: 789 ttatattgatattgttgaagcaaaacc 815 |||||||||||||||||||| |||||| Sbjct: 1335 ttatattgatattgttgaaggaaaacc 1361
>ref|XM_660972.1| Cryptosporidium hominis TU502 binding protein (Chro.10101), partial mRNA Length = 2295 Score = 46.1 bits (23), Expect = 0.36 Identities = 26/27 (96%) Strand = Plus / Plus Query: 789 ttatattgatattgttgaagcaaaacc 815 |||||||||||||||||||| |||||| Sbjct: 1335 ttatattgatattgttgaaggaaaacc 1361
>emb|BX571771.5| Zebrafish DNA sequence from clone CH211-160F8 in linkage group 21, complete sequence Length = 162245 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 789 ttatattgatattgttgaagcaa 811 ||||||||||||||||||||||| Sbjct: 21425 ttatattgatattgttgaagcaa 21403
>emb|BX640583.7| Zebrafish DNA sequence from clone CH211-186C22 in linkage group 21, complete sequence Length = 130141 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 789 ttatattgatattgttgaagcaa 811 ||||||||||||||||||||||| Sbjct: 112201 ttatattgatattgttgaagcaa 112223
>gb|DQ270212.1| Pristionchus pacificus EGL-17 (egl-17) mRNA, egl-17-tu312 allele, complete cds Length = 798 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1221 cgaacctccgaagaaggaagaa 1242 |||||||||||||||||||||| Sbjct: 570 cgaacctccgaagaaggaagaa 591
>emb|CR932983.13| Zebrafish DNA sequence from clone DKEY-235J21 in linkage group 20, complete sequence Length = 91559 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 tccagcatccttttttgacaa 398 ||||||||||||||||||||| Sbjct: 48767 tccagcatccttttttgacaa 48747
>emb|CR759921.10| Zebrafish DNA sequence from clone DKEY-277D23 in linkage group 25, complete sequence Length = 170745 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 961 gaaccaaagttcaaaccattc 981 ||||||||||||||||||||| Sbjct: 126669 gaaccaaagttcaaaccattc 126689
>gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, complete sequence Length = 227953 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 781 aaacagtattatattgatatt 801 ||||||||||||||||||||| Sbjct: 42004 aaacagtattatattgatatt 42024
>gb|AC139512.20| Mus musculus chromosome 6, clone RP24-540G13, complete sequence Length = 179236 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1142 aaacaggaaagcttgtgtttg 1162 ||||||||||||||||||||| Sbjct: 94903 aaacaggaaagcttgtgtttg 94923
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1175 gcagcaagaaagagggagaag 1195 ||||||||||||||||||||| Sbjct: 92637 gcagcaagaaagagggagaag 92657
>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence Length = 186155 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 917 caggcaaggcacctgctgaag 937 ||||||||||||||||||||| Sbjct: 67711 caggcaaggcacctgctgaag 67731
>gb|BC061998.1| Rattus norvegicus cDNA clone IMAGE:5599620, containing frame-shift errors Length = 1758 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 521 cacactgtggtgtattggagtttgt 545 |||||||||||||| |||||||||| Sbjct: 284 cacactgtggtgtactggagtttgt 308
>gb|AC129601.4| Mus musculus BAC clone RP23-444N1 from chromosome 16, complete sequence Length = 173054 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tatgcaggatatggttaccat 345 ||||||||||||||||||||| Sbjct: 77915 tatgcaggatatggttaccat 77935
>gb|AC161243.2| Mus musculus BAC clone RP24-241A8 from chromosome 12, complete sequence Length = 185031 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 196 gtctcgtctcgtcccgtcgcgtcgcgtcc 224 |||||||||||||||||| |||| ||||| Sbjct: 118982 gtctcgtctcgtcccgtcccgtcccgtcc 119010
>gb|U09989.1|ZMU09989 Zea mays D3L H(+)-transporting ATPase (Mha1) gene, complete cds Length = 9285 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 790 tatattgatattgttgaagca 810 ||||||||||||||||||||| Sbjct: 7626 tatattgatattgttgaagca 7646
>dbj|AK144183.1| Mus musculus RCB-0035 WEHI-3 cDNA, RIKEN full-length enriched library, clone:G430079O13 product:URB precursor, full insert sequence Length = 4024 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tatgcaggatatggttaccat 345 ||||||||||||||||||||| Sbjct: 3356 tatgcaggatatggttaccat 3376
>ref|NM_026439.2| Mus musculus coiled-coil domain containing 80 (Ccdc80), mRNA dbj|AK132178.1| Mus musculus 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3321404F21 product:URB precursor, full insert sequence Length = 3648 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tatgcaggatatggttaccat 345 ||||||||||||||||||||| Sbjct: 3133 tatgcaggatatggttaccat 3153
>dbj|AK009795.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310044C02 product:hypothetical protein, full insert sequence Length = 902 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tatgcaggatatggttaccat 345 ||||||||||||||||||||| Sbjct: 647 tatgcaggatatggttaccat 667
>dbj|AK032359.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430526G15 product:STEROID SENSITIVE GENE-1 PROTEIN homolog [Rattus norvegicus], full insert sequence Length = 3521 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tatgcaggatatggttaccat 345 ||||||||||||||||||||| Sbjct: 3103 tatgcaggatatggttaccat 3123
>dbj|AK011256.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610001E17 product:STEROID SENSITIVE GENE-1 PROTEIN homolog [Rattus norvegicus], full insert sequence Length = 1679 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tatgcaggatatggttaccat 345 ||||||||||||||||||||| Sbjct: 1423 tatgcaggatatggttaccat 1443
>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence Length = 220437 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 caggcaaggcacctgctgaag 937 ||||||||||||||||||||| Sbjct: 51647 caggcaaggcacctgctgaag 51627
>emb|BX062595.1|CNS09KGN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC43DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1023 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 catgccctactggatgatgca 587 ||||||||||||||||||||| Sbjct: 764 catgccctactggatgatgca 744
>emb|BX062594.1|CNS09KGM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC43DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1016 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 catgccctactggatgatgca 587 ||||||||||||||||||||| Sbjct: 361 catgccctactggatgatgca 381
>ref|NM_053418.2| Rattus norvegicus ubiquitin fusion degradation 1-like (Ufd1l), mRNA Length = 1802 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 521 cacactgtggtgtattggagtttgt 545 |||||||||||||| |||||||||| Sbjct: 328 cacactgtggtgtactggagtttgt 352
>emb|CR931957.6| Mouse DNA sequence from clone RP23-21C14 on chromosome 2, complete sequence Length = 89566 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 196 gtctcgtctcgtcccgtcgcgtcgcgtcc 224 |||||||||||||||||| |||| ||||| Sbjct: 55254 gtctcgtctcgtcccgtcccgtcccgtcc 55226
>gb|AF234601.1|AF234601 Rattus norvegicus UFD1 mRNA, complete cds Length = 1041 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 521 cacactgtggtgtattggagtttgt 545 |||||||||||||| |||||||||| Sbjct: 303 cacactgtggtgtactggagtttgt 327
>gb|AF230498.1|AF230498 Canis familiaris NADPH thyroid oxidase 2 (THOX2) mRNA, partial cds Length = 5204 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 691 atctccaaccccaaagccatc 711 ||||||||||||||||||||| Sbjct: 655 atctccaaccccaaagccatc 635
>emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in linkage group 2, complete sequence Length = 184594 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1066 gcaccttcagacacaaacaaa 1086 ||||||||||||||||||||| Sbjct: 16022 gcaccttcagacacaaacaaa 16002
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence Length = 201379 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 869 ctcttgattacaaagaacctg 889 ||||||||||||||||||||| Sbjct: 163631 ctcttgattacaaagaacctg 163611
>ref|XM_321840.2| Anopheles gambiae str. PEST ENSANGP00000020956 (ENSANGG00000018467), partial mRNA Length = 927 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 catgccctactggatgatgca 587 ||||||||||||||||||||| Sbjct: 270 catgccctactggatgatgca 290
>emb|AJ324075.1|HSA324075 Homo sapiens genomic sequence surrounding NotI site, clone NR1-WC1C Length = 549 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 697 aaccccaaagccatcttggag 717 ||||||||||||||||||||| Sbjct: 213 aaccccaaagccatcttggag 233
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tcccgccccctctccgcggca 84 ||||||||||||||||||||| Sbjct: 6165933 tcccgccccctctccgcggca 6165913
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 790 tatattgatattgttgaagca 810 ||||||||||||||||||||| Sbjct: 2066829 tatattgatattgttgaagca 2066809
>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence Length = 192344 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 869 ctcttgattacaaagaacctg 889 ||||||||||||||||||||| Sbjct: 39245 ctcttgattacaaagaacctg 39225
>dbj|AB075019.1| Mus musculus mRNA for URB, complete cds Length = 3277 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tatgcaggatatggttaccat 345 ||||||||||||||||||||| Sbjct: 3022 tatgcaggatatggttaccat 3042 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 272,083,591 Number of extensions: 14843052 Number of successful extensions: 289464 Number of sequences better than 10.0: 77 Number of HSP's gapped: 289451 Number of HSP's successfully gapped: 155 Length of query: 1494 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1471 Effective length of database: 18,503,978,556 Effective search space: 27219352455876 Effective search space used: 27219352455876 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
