ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf64k16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK066319:Os11g0592800 922 0.0
2AK101879:Os04g0434300 96 8e-20
3AK100025:Os08g0110400 34 0.38
4AK121455:Os04g0272400 32 1.4
5AK109905:Os08g0133100 32 1.4
6Os04g0446100:Os04g0446100 30 7.1
7Os08g0288500:Os08g0288500 30 9.3
8AK107025:Os06g0703400 30 9.3

>AK066319:Os11g0592800 |
          Length = 600
 Score =  922 bits (2382), Expect = 0.0
 Identities = 453/536 (84%), Positives = 483/536 (90%)
 Frame = +2

Query: 209  SRSVRHLAATDVSEPQTDSESGTATVKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDI 388
            SR +   AAT VSE QTD ESG  T  KGRIYHETYGCQMNVNDMEIVLSIMK EGY++I
Sbjct: 65   SRPLAASAATAVSEAQTDLESGPVTASKGRIYHETYGCQMNVNDMEIVLSIMKNEGYDEI 124

Query: 389  VPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLG 568
            VPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWK NVA GRS+SLRPPKIAVLG
Sbjct: 125  VPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKANVAAGRSRSLRPPKIAVLG 184

Query: 569  CMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVR 748
            CMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVR
Sbjct: 185  CMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVR 244

Query: 749  ISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQ 928
            ISDNSVTAFVS+MRGCNNMCSFCIVPFT                  LW AGVKEVMLLGQ
Sbjct: 245  ISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWKAGVKEVMLLGQ 304

Query: 929  NVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSP 1108
            NVNSYNDTSEVEELEPGKNW+LSEGFSS CKVKN GLRFADLLDQLSLEYPEMRFRFTSP
Sbjct: 305  NVNSYNDTSEVEELEPGKNWELSEGFSSMCKVKNMGLRFADLLDQLSLEYPEMRFRFTSP 364

Query: 1109 HPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPD 1288
            HPKD+PDELLYLMRDRHN+CKLIH+PAQSGS+ VLERM+RGYTREAYLELVQKIR++IPD
Sbjct: 365  HPKDYPDELLYLMRDRHNVCKLIHMPAQSGSSAVLERMRRGYTREAYLELVQKIRSIIPD 424

Query: 1289 VGLSSDFISGFCEETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVK 1468
            VGLSSDFISGFC ETE++HA+TL++VRAVGYDMAYMFAYSMREKTHAHRNY DDVP+DVK
Sbjct: 425  VGLSSDFISGFCGETEEEHAETLTLVRAVGYDMAYMFAYSMREKTHAHRNYVDDVPDDVK 484

Query: 1469 QRRLAELINTFRETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPV 1648
            QRRLAELI+TFRETT KIYDSQ+GT Q+VLVEGPNKRAPETE+ GKTDRGHRVSF S+PV
Sbjct: 485  QRRLAELISTFRETTAKIYDSQVGTVQLVLVEGPNKRAPETEMIGKTDRGHRVSFASVPV 544

Query: 1649 THTSEGDGARKPVVGDFVEVKILRSSTASLSGEPIARTSLGMYCKNHASDAHVVGA 1816
             HT EGD  RKPVVGDF+EVKI +SSTASLSG+ IARTSL  + KNH+S+AH V A
Sbjct: 545  PHTFEGDELRKPVVGDFIEVKITKSSTASLSGDVIARTSLSKFYKNHSSEAHAVAA 600



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>AK101879:Os04g0434300 |
          Length = 621

 Score = 96.3 bits (238), Expect = 8e-20
 Identities = 98/460 (21%), Positives = 188/460 (40%), Gaps = 21/460 (4%)
 Frame = +2

Query: 245  SEPQTDSE-SGTATVKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIF 421
            + PQ ++   GT T     IY +T+GC  N +D E +   +   GY  I  +PE A++  
Sbjct: 41   TRPQPEARIPGTQT-----IYVKTFGCSHNQSDSEYMSGQLSAFGYA-ITEEPEGADLWL 94

Query: 422  INTCAIRDNAEQKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKE-KI 598
            INTC +++ ++  +   ++                + KS   P + V GC+ +  ++ K 
Sbjct: 95   INTCTVKNPSQSAMTTLIS----------------KCKSANKP-LVVAGCVPQGSRDLKE 137

Query: 599  LDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFV 778
            L+   ++ V       + + R+++ V+   KG    L   +T   +   ++  N     +
Sbjct: 138  LEGISVIGV-------QQIDRVVEVVEETLKGHEVRLLSRKTLPSLDLPKVRKNKFIEIL 190

Query: 779  SVMRGCNNMCSFCIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSE 958
             +  GC   C++C                       +   GV+E+ L  ++  +Y     
Sbjct: 191  PINVGCLGACTYCKTKHARGHLGSYTIESLVDRVKIVVSEGVREIWLSSEDTGAYG---- 246

Query: 959  VEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPE-----MRFRFTSP----- 1108
                                  ++ G    +LL+ ++ E P      +R   T+P     
Sbjct: 247  ----------------------RDIGTNLPNLLNGIAAELPADRSTMLRIGMTNPPFILE 284

Query: 1109 HPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPD 1288
            H K+    L +       +   +H+P QSGS  VL  M R YT   +  +V  +  ++P 
Sbjct: 285  HLKEIASVLCHPC-----VYSFLHVPVQSGSDAVLTAMNREYTVSEFRRVVDTLCELVPG 339

Query: 1289 VGLSSDFISGFCEETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVK 1468
            + +++D I GF  ET++D + T+++V+   +   ++  +  R  T A R  +  VP+   
Sbjct: 340  MQIATDIICGFPGETDEDFSQTVNLVKQYLFPQVHISQFYPRPGTPAARMKK--VPSVEV 397

Query: 1469 QRRLAELINTFRE---------TTRKIYDSQIGTTQVVLV 1561
            ++R  EL + F              +I+ ++I T  V LV
Sbjct: 398  KKRSRELTSVFESFSPYQGMEGKVERIWITEIATDGVHLV 437



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>AK100025:Os08g0110400 |
          Length = 407

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -3

Query: 2222 FLSWFQTGPYPGRHKHAHIISVFIVSARNNSRACSKQKQLYEKCQLY 2082
            ++ W + GP+P R+  ++I   FI + RNN   C+   +    C L+
Sbjct: 339  WVDWSRGGPHPARYGASNISEEFIQAIRNNGTRCTYNSKPTSVCYLF 385



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>AK121455:Os04g0272400 |
          Length = 412

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -3

Query: 2222 FLSWFQTGPYPGRHKHAHIISVFIVSARNNSRACSKQKQLYEKCQLY 2082
            ++ W + GP+P R   A +   F+ + RNN   C+   +    C L+
Sbjct: 344  WVDWSRGGPHPARFGKATVTPAFVQAIRNNGTRCAYNGKPTTVCYLF 390



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>AK109905:Os08g0133100 |
          Length = 508

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
 Frame = +2

Query: 1247 YLELVQKIRNVI---PDVGLSSDFISGFCEETEDDHADTLS-IVRAVGYDMAYMFAYSMR 1414
            Y  LV  +R ++   PD+  +  F+S F E   ++H   +  I+R V   M Y   Y   
Sbjct: 286  YRRLVGSLRYLVHTRPDLAFAVGFVSRFMERPTEEHMVAVKRILRYVAGTMEYGLHYKRE 345

Query: 1415 EKTHAHRNYED-DVPNDVKQRR 1477
            ++      Y D D+  D+  RR
Sbjct: 346  KEEQRLIGYSDSDLAGDIDTRR 367



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>Os04g0446100:Os04g0446100 |
          Length = 583

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +2

Query: 521 GGRSKSLRPPK----IAVLG-CMAERLKEKILDSDKMVDVVCGPDA 643
           G   K  RP K    I ++G CM  R+ E I+   +MV+  C PD+
Sbjct: 488 GMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 533



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>Os08g0288500:Os08g0288500 |
          Length = 742

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 21/75 (28%), Positives = 32/75 (42%)
 Frame = +2

Query: 1442 EDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGH 1621
            +  +P+   Q RL +L+ T  E     +++     QV  +  P K A      GK     
Sbjct: 497  DSSLPSSEGQIRLEKLLGTEPEDFTVNWENSKRPAQVKGLSAPGKLARNQTSSGKKSSKK 556

Query: 1622 RVSFTSLPVTHTSEG 1666
            +VSF   PV+  S G
Sbjct: 557  QVSFAERPVSFVSCG 571



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>AK107025:Os06g0703400 |
          Length = 196

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 34/124 (27%), Positives = 48/124 (38%)
 Frame = +2

Query: 1502 RETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARK 1681
            R + R+  D + G     L+EG  +R   T L       H + FTS+     +E   ++ 
Sbjct: 68   RSSRRRRNDDESGAGSESLLEGSFRRQKVTRLDCAMLADHLLRFTSM-----TEHQLSQS 122

Query: 1682 PVVGDFVEVKILRSSTASLSGEPIARTSLGMYCKNHASDAHVVGA*RVAEFMAVHI*SEL 1861
            P   D  E     S  ASLS  P             AS A+V    R   ++A  I S  
Sbjct: 123  PCTRDQTEKAWAASIAASLSAAP-------------ASSAYVTHRCRCRYWLARRIASAA 169

Query: 1862 VKPA 1873
             +PA
Sbjct: 170  QRPA 173


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 62,334,563
Number of extensions: 1404589
Number of successful extensions: 3580
Number of sequences better than 10.0: 8
Number of HSP's gapped: 3571
Number of HSP's successfully gapped: 8
Length of query: 745
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 637
Effective length of database: 11,075,427
Effective search space: 7055046999
Effective search space used: 7055046999
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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