Clone Information

BLAST Search Result

Clone Name	FLbaf64k16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Q2R1U4:CK5P1_ORYSJ CDK5RAP1-like protein - Oryza sativa subsp. j...	922	0.0
2	Q8H0V1:CK5P1_ARATH CDK5RAP1-like protein - Arabidopsis thaliana ...	776	0.0
3	Q9JLH6:CK5P1_RAT CDK5 regulatory subunit-associated protein 1 - ...	489	e-137
4	Q8BTW8:CK5P1_MOUSE CDK5 regulatory subunit-associated protein 1 ...	481	e-135
5	Q96SZ6:CK5P1_HUMAN CDK5 regulatory subunit-associated protein 1 ...	473	e-132
6	Q9VGZ1:CK5P1_DROME CDK5RAP1-like protein - Drosophila melanogast...	461	e-129
7	Q09316:CK5P1_CAEEL CDK5RAP1-like protein - Caenorhabditis elegans	399	e-110
8	O31778:YMCB_BACSU UPF0004 protein ymcB - Bacillus subtilis	247	2e-64
9	O83735:Y754_TREPA UPF0004 protein TP_0754 - Treponema pallidum	243	2e-63
10	Q89AC2:Y392_BUCBP UPF0004 protein bbp_392 - Buchnera aphidicola ...	242	5e-63
11	Q9L699:Y1001_PASMU UPF0004 protein PM1001 - Pasteurella multocida	239	4e-62
12	Q57163:Y019_HAEIN UPF0004 protein HI0019 - Haemophilus influenzae	238	6e-62
13	O66638:Y284_AQUAE UPF0004 protein aq_284 - Aquifex aeolicus	230	2e-59
14	P57516:Y441_BUCAI UPF0004 protein BU441 - Buchnera aphidicola su...	229	3e-59
15	Q8K9C2:Y426_BUCAP UPF0004 protein BUsg_426 - Buchnera aphidicola...	227	1e-58
16	Q9ZCE8:Y808_RICPR UPF0004 protein RP808 - Rickettsia prowazekii	222	4e-57
17	P0AEI1:YLEA_ECOLI UPF0004 protein yleA - Escherichia coli	220	2e-56
18	P0AEI2:YLEA_ECOL6 UPF0004 protein yleA - Escherichia coli O6	220	2e-56
19	P0AEI3:YLEA_ECO57 UPF0004 protein yleA - Escherichia coli O157:H7	220	2e-56
20	P73127:Y996_SYNY3 UPF0004 protein sll0996 - Synechocystis sp. (s...	219	3e-56
21	P56131:Y269_HELPY UPF0004 protein HP_0269 - Helicobacter pylori ...	216	2e-55
22	Q51470:Y3980_PSEAE UPF0004 protein PA3980 - Pseudomonas aeruginosa	215	5e-55
23	Q9ZMG6:Y269_HELPJ UPF0004 protein jhp_0254 - Helicobacter pylori...	214	9e-55
24	P67086:Y2752_MYCBO UPF0004 protein Mb2752c - Mycobacterium bovis	213	3e-54
25	P67085:Y2733_MYCTU UPF0004 protein Rv2733c/MT2803 - Mycobacteriu...	213	3e-54
26	Q49842:Y989_MYCLE UPF0004 protein ML0989 - Mycobacterium leprae	199	4e-50
27	P54462:YQEV_BACSU UPF0004 protein yqeV - Bacillus subtilis	140	3e-32
28	Q9Z874:Y477_CHLPN UPF0004 protein CPn_0477/CP_0277/CPj0477/CpB04...	138	1e-31
29	Q9UXX9:Y1729_PYRAB UPF0004 protein PYRAB17290 - Pyrococcus abyssi	137	2e-31
30	O59545:Y1875_PYRHO UPF0004 protein PH1875 - Pyrococcus horikoshii	130	2e-29
31	Q58277:Y867_METJA UPF0004 protein MJ0867 - Methanococcus jannaschii	130	3e-29
32	Q9ZDB6:Y416_RICPR UPF0004 protein RP416 - Rickettsia prowazekii	129	4e-29
33	Q9CKN9:Y1571_PASMU UPF0004 protein PM1571 - Pasteurella multocida	129	5e-29
34	O67016:Y849_AQUAE UPF0004 protein aq_849 - Aquifex aeolicus	129	7e-29
35	O66772:Y474_AQUAE UPF0004 protein aq_474 - Aquifex aeolicus	125	6e-28
36	Q9WZT7:Y830_THEMA UPF0004 protein TM_0830 - Thermotoga maritima	124	2e-27
37	Q49573:Y16R_MYCIO UPF0004 protein in 16S RNA 5'region - Mycoplas...	122	5e-27
38	P0AEI4:YLIG_ECOLI UPF0004 protein yliG - Escherichia coli	122	8e-27
39	P0AEI5:YLIG_ECO57 UPF0004 protein yliG - Escherichia coli O157:H7	122	8e-27
40	O26914:Y826_METTH UPF0004 protein MTH_826 - Methanobacterium the...	120	2e-26
41	Q55803:Y082_SYNY3 UPF0004 protein slr0082 - Synechocystis sp. (s...	112	5e-24
42	O29021:Y1247_ARCFU UPF0004 protein AF_1247 - Archaeoglobus fulgidus	111	1e-23
43	O83293:Y269_TREPA UPF0004 protein TP_0269 - Treponema pallidum	91	2e-17
44	Q9ZMF0:Y285_HELPJ UPF0004 protein jhp_0270 - Helicobacter pylori...	84	3e-15
45	P56130:Y285_HELPY UPF0004 protein HP_0285 - Helicobacter pylori ...	83	6e-15
46	Q58882:Y1487_METJA Uncharacterized protein MJ1487 - Methanococcu...	42	0.011
47	Q58275:Y865_METJA UPF0004 protein MJ0865 - Methanococcus jannaschii	40	0.032
48	Q5UP06:YR756_MIMIV Uncharacterized protein R756 - Mimivirus	35	1.0
49	P59342:BARA_SHIFL Signal transduction histidine-protein kinase b...	35	1.3
50	P0AEC5:BARA_ECOLI Signal transduction histidine-protein kinase b...	35	1.7
51	P0AEC6:BARA_ECOL6 Signal transduction histidine-protein kinase b...	35	1.7
52	P0AEC7:BARA_ECO57 Signal transduction histidine-protein kinase b...	35	1.7
53	Q9K7C9:LIPA_BACHD Lipoyl synthase - Bacillus halodurans	33	6.6
54	Q8DLC2:LIPA1_SYNEL Lipoyl synthase 1 - Synechococcus elongatus (...	33	6.6
55	P20702:ITAX_HUMAN Integrin alpha-X precursor - Homo sapiens (Human)	33	6.6

>Q2R1U4:CK5P1_ORYSJ CDK5RAP1-like protein - Oryza sativa subsp. japonica (Rice)|
          Length = 600
 Score =  922 bits (2382), Expect = 0.0
 Identities = 453/536 (84%), Positives = 483/536 (90%)
 Frame = +2

Query: 209  SRSVRHLAATDVSEPQTDSESGTATVKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDI 388
            SR +   AAT VSE QTD ESG  T  KGRIYHETYGCQMNVNDMEIVLSIMK EGY++I
Sbjct: 65   SRPLAASAATAVSEAQTDLESGPVTASKGRIYHETYGCQMNVNDMEIVLSIMKNEGYDEI 124

Query: 389  VPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLG 568
            VPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWK NVA GRS+SLRPPKIAVLG
Sbjct: 125  VPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKANVAAGRSRSLRPPKIAVLG 184

Query: 569  CMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVR 748
            CMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVR
Sbjct: 185  CMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVR 244

Query: 749  ISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQ 928
            ISDNSVTAFVS+MRGCNNMCSFCIVPFT                  LW AGVKEVMLLGQ
Sbjct: 245  ISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWKAGVKEVMLLGQ 304

Query: 929  NVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSP 1108
            NVNSYNDTSEVEELEPGKNW+LSEGFSS CKVKN GLRFADLLDQLSLEYPEMRFRFTSP
Sbjct: 305  NVNSYNDTSEVEELEPGKNWELSEGFSSMCKVKNMGLRFADLLDQLSLEYPEMRFRFTSP 364

Query: 1109 HPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPD 1288
            HPKD+PDELLYLMRDRHN+CKLIH+PAQSGS+ VLERM+RGYTREAYLELVQKIR++IPD
Sbjct: 365  HPKDYPDELLYLMRDRHNVCKLIHMPAQSGSSAVLERMRRGYTREAYLELVQKIRSIIPD 424

Query: 1289 VGLSSDFISGFCEETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVK 1468
            VGLSSDFISGFC ETE++HA+TL++VRAVGYDMAYMFAYSMREKTHAHRNY DDVP+DVK
Sbjct: 425  VGLSSDFISGFCGETEEEHAETLTLVRAVGYDMAYMFAYSMREKTHAHRNYVDDVPDDVK 484

Query: 1469 QRRLAELINTFRETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPV 1648
            QRRLAELI+TFRETT KIYDSQ+GT Q+VLVEGPNKRAPETE+ GKTDRGHRVSF S+PV
Sbjct: 485  QRRLAELISTFRETTAKIYDSQVGTVQLVLVEGPNKRAPETEMIGKTDRGHRVSFASVPV 544

Query: 1649 THTSEGDGARKPVVGDFVEVKILRSSTASLSGEPIARTSLGMYCKNHASDAHVVGA 1816
             HT EGD  RKPVVGDF+EVKI +SSTASLSG+ IARTSL  + KNH+S+AH V A
Sbjct: 545  PHTFEGDELRKPVVGDFIEVKITKSSTASLSGDVIARTSLSKFYKNHSSEAHAVAA 600

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>Q8H0V1:CK5P1_ARATH CDK5RAP1-like protein - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 640

 Score =  776 bits (2003), Expect = 0.0
 Identities = 376/522 (72%), Positives = 441/522 (84%), Gaps = 6/522 (1%)
 Frame = +2

Query: 230  AATDVSEPQTDSES--GTATVKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPE 403
            A   ++ P+T+SES   +    KGRIYHETYGCQMN+NDMEIVL+IMK  GY ++V DPE
Sbjct: 106  AHASLTTPETESESTLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPE 165

Query: 404  SAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAER 583
            SAE+IF+NTCAIR+NAEQ+VWQRLNYFWFLKR+WK N A GR+KSL+PPK+ VLGCMAER
Sbjct: 166  SAEVIFVNTCAIRENAEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAER 225

Query: 584  LKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNS 763
            LK+KILDSDKMVDVVCGPDAYRDLPRLL+EVDYGQKGINTLLSLEETYADI+PVRIS+NS
Sbjct: 226  LKDKILDSDKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENS 285

Query: 764  VTAFVSVMRGCNNMCSFCIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSY 943
            +TAFVSVMRGCNNMC+FCIVPFT                  LW +GVKEV LLGQNVNSY
Sbjct: 286  ITAFVSVMRGCNNMCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSY 345

Query: 944  NDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDF 1123
            ND S   + E G NW+ SEGFSSRCKVKN GLRFADLLD+LS+E+PEMRFRFTSPHPKD+
Sbjct: 346  NDDSA--DRESGANWEYSEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDY 403

Query: 1124 PDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSS 1303
            PDELLYLMRDRHNIC LIHLPAQSG++ +LE+M+RGYTREAYL+LV+KIR++IPDV ++S
Sbjct: 404  PDELLYLMRDRHNICNLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITS 463

Query: 1304 DFISGFCEETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLA 1483
            DFI+GFC ETE++H +TLS+VRAVGYDMAYMFAYSMREKTHAHRNY DDVP +VKQRRL 
Sbjct: 464  DFITGFCGETEEEHQETLSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLT 523

Query: 1484 ELINTFRETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTS- 1660
            ELI+ FRETT   YDSQ+G+TQ+VLVEGPNKRAPETEL GKTD+GHRVSF + P+   + 
Sbjct: 524  ELIDAFRETTGPCYDSQVGSTQLVLVEGPNKRAPETELIGKTDKGHRVSFVTKPLFDKAC 583

Query: 1661 --EGDG-ARKPVVGDFVEVKILRSSTASLSGEPIARTSLGMY 1777
              +GD   R P +GDFVEV+I +S+ ASL GE +A + + ++
Sbjct: 584  LLDGDDLKRNPGIGDFVEVQIEKSTRASLFGEALAISKMSLF 625

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>Q9JLH6:CK5P1_RAT CDK5 regulatory subunit-associated protein 1 - Rattus norvegicus|
            (Rat)
          Length = 586

 Score =  489 bits (1260), Expect = e-137
 Identities = 261/513 (50%), Positives = 344/513 (67%)
 Frame = +2

Query: 230  AATDVSEPQTDSESGTATVKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESA 409
            ++ +V +P           ++ ++Y ETYGCQMNVND EI  SI++K GY     + + A
Sbjct: 76   SSPEVEDPPPYLSGDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLR-TSNLQEA 134

Query: 410  EIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLK 589
            ++I + TC+IR+ AEQ +W RL+    LK +        R +S  P +I +LGCMAERLK
Sbjct: 135  DVILLVTCSIREKAEQTIWNRLHQLKVLKAK--------RPRSRVPLRIGILGCMAERLK 186

Query: 590  EKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVT 769
             +IL+ +KMVD++ GPDAYRDLPRLL  V+ GQ+  N LLSL+ETYADI PV+ S ++ +
Sbjct: 187  GEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQAANVLLSLDETYADIMPVQTSPSATS 246

Query: 770  AFVSVMRGCNNMCSFCIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYND 949
            AFVS+MRGC+NMCS+CIVPFT                  L   G+KEV LLGQNVNS+ D
Sbjct: 247  AFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILDEVRKLSEQGLKEVTLLGQNVNSFRD 306

Query: 950  TSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPD 1129
             SEV+    G    LS GF++  K K  GLRF+ LLDQ+S   PEMR RFTSPHPKDFPD
Sbjct: 307  NSEVQFSSTGSA-NLSRGFTTNYKPKQGGLRFSHLLDQVSRIDPEMRIRFTSPHPKDFPD 365

Query: 1130 ELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDF 1309
            E+L L+R+RHNICK IHLPAQSGS+ VLE M+RGY+REAY+ LV  IR  IP VGLSSDF
Sbjct: 366  EVLQLIRERHNICKQIHLPAQSGSSRVLEAMRRGYSREAYVALVHHIREAIPGVGLSSDF 425

Query: 1310 ISGFCEETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAEL 1489
            I+GFC ETEDDH  T+S++R V Y+  ++FAYSMR+KT A+   +DDVP +VK RRL EL
Sbjct: 426  ITGFCGETEDDHLQTVSLLREVQYNTGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEEL 485

Query: 1490 INTFRETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGD 1669
            I  FRE   K+  + +G TQ+VLVEG +KR+  T+L G+ D   +V F    V   ++  
Sbjct: 486  ITVFREEASKVNATSVGCTQLVLVEGFSKRS-TTDLCGRNDANLKVIFPDAEVEDITDPG 544

Query: 1670 GARKPVVGDFVEVKILRSSTASLSGEPIARTSL 1768
               +   GD+V VKI+ +S+ +L G  + RT++
Sbjct: 545  LKVRAQPGDYVLVKIISASSQTLKGHILCRTTM 577

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>Q8BTW8:CK5P1_MOUSE CDK5 regulatory subunit-associated protein 1 - Mus musculus (Mouse)|
          Length = 588

 Score =  481 bits (1237), Expect = e-135
 Identities = 257/513 (50%), Positives = 340/513 (66%)
 Frame = +2

Query: 230  AATDVSEPQTDSESGTATVKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESA 409
            ++ +V +P           ++ ++Y ETYGCQMNVND EI  SI++K GY     + + A
Sbjct: 78   SSPEVEDPPPYLSGDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLR-TSNLQEA 136

Query: 410  EIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLK 589
            ++I + TC+IR+ AEQ +W RL+    LK +        R +S  P +I +LGCMAERLK
Sbjct: 137  DVILLVTCSIREKAEQTIWNRLHQLKVLKTK--------RPRSRVPLRIGILGCMAERLK 188

Query: 590  EKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVT 769
             +IL+ +KMVD++ GPDAYRDLPRLL  V+ GQ+  N LLSL+ETYADI PV+ S ++ +
Sbjct: 189  GEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQAANVLLSLDETYADIMPVQTSPSATS 248

Query: 770  AFVSVMRGCNNMCSFCIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYND 949
            AFVS+MRGC+NMCS+CIVPFT                  L   G+KEV LLGQNVNS+ D
Sbjct: 249  AFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILDEVRKLSEQGLKEVTLLGQNVNSFRD 308

Query: 950  TSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPD 1129
             SEV+    G    LS GF++  K K  GLRF+ LLDQ+S   PEMR RFTSPHPKDFPD
Sbjct: 309  NSEVQFNNAGSA-NLSRGFTTNYKPKQGGLRFSHLLDQVSRIDPEMRIRFTSPHPKDFPD 367

Query: 1130 ELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDF 1309
            E+L L+R+RHNICK IHLPAQSGS+ VL+ M+RGY+REAY+ LV  +R  IP V LSSDF
Sbjct: 368  EVLQLIRERHNICKQIHLPAQSGSSRVLDAMRRGYSREAYVALVHHVRETIPGVSLSSDF 427

Query: 1310 ISGFCEETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAEL 1489
            I+GFC ETEDDH  T+S++R V Y+  ++FAYSMR+KT A+   +DDVP +VK RRL EL
Sbjct: 428  ITGFCGETEDDHRQTVSLLREVQYNTGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEEL 487

Query: 1490 INTFRETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGD 1669
            I  FRE   K   + +G +Q+VLVEG +KR+  T+L G+ D   +V F    V   +   
Sbjct: 488  ITVFREEASKANKTSVGCSQLVLVEGFSKRS-TTDLCGRNDANLKVIFPDAEVEDITNPG 546

Query: 1670 GARKPVVGDFVEVKILRSSTASLSGEPIARTSL 1768
               +   GD+V VKI  +S+ +L G  + RT++
Sbjct: 547  LKVRAQPGDYVLVKITSASSQTLKGHILCRTTM 579

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>Q96SZ6:CK5P1_HUMAN CDK5 regulatory subunit-associated protein 1 - Homo sapiens (Human)|
          Length = 601

 Score =  473 bits (1218), Expect = e-132
 Identities = 258/515 (50%), Positives = 335/515 (65%), Gaps = 17/515 (3%)
 Frame = +2

Query: 287  KKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVW 466
            ++ ++Y ETYGCQMNVND EI  SI++K GY     + + A++I + TC+IR+ AEQ +W
Sbjct: 98   RQRKVYLETYGCQMNVNDTEIAWSILQKSGYLR-TSNLQEADVILLVTCSIREKAEQTIW 156

Query: 467  QRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAY 646
             RL+    LK +        R +S  P +I +LGCMAERLKE+IL+ +KMVD++ GPDAY
Sbjct: 157  NRLHQLKALKTR--------RPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAY 208

Query: 647  RDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVP 826
            RDLPRLL   + GQ+  N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVP
Sbjct: 209  RDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVP 268

Query: 827  FTXXXXXXXXXXXXXXXXXXL--------------WYAGVKEVMLLGQNVNSYNDTSEVE 964
            FT                  L                 G+KEV LLGQNVNS+ D SEV+
Sbjct: 269  FTRGRERSRPIASILEEVKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNSEVQ 328

Query: 965  ELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYL 1144
                     LS GF++  K K  GLRFA LLDQ+S   PEMR RFTSPHPKDFPDE+L L
Sbjct: 329  -FNSAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQL 387

Query: 1145 MRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFC 1324
            + +R NICK IHLPAQSGS+ VLE M+RGY+REAY+ELV  IR  IP V LSSDFI+GFC
Sbjct: 388  IHERDNICKQIHLPAQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFC 447

Query: 1325 EETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFR 1504
             ETE+DH  T+S++R V Y+M ++FAYSMR+KT A+   +DDVP +VK RRL ELI  FR
Sbjct: 448  GETEEDHVQTVSLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFR 507

Query: 1505 ETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKP 1684
            E   K   + +G TQ+VLVEG +KR+  T+L G+ D   +V F    +   +      + 
Sbjct: 508  EEATKANQTSVGCTQLVLVEGLSKRS-ATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRA 566

Query: 1685 VVGDFVEVKILRSSTASLSGEPIARTSL---GMYC 1780
              GD+V VKI  +S+ +L G  + RT+L     YC
Sbjct: 567  QPGDYVLVKITSASSQTLRGHVLCRTTLRDSSAYC 601

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>Q9VGZ1:CK5P1_DROME CDK5RAP1-like protein - Drosophila melanogaster (Fruit fly)|
          Length = 583

 Score =  461 bits (1187), Expect = e-129
 Identities = 245/511 (47%), Positives = 334/511 (65%), Gaps = 1/511 (0%)
 Frame = +2

Query: 239  DVSEPQTDSESGTATVKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEII 418
            D S P  +S       +K  ++ E YGCQMN ND E+V SI+K+ GY     +PE A++I
Sbjct: 76   DTSVPYLNSIDFNGNGRK--VHFEVYGCQMNTNDTEVVFSILKENGYLRC-QEPEEADVI 132

Query: 419  FINTCAIRDNAEQKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKI 598
             + TCA+RD AEQ++  RL +   +K +        RS    P ++ +LGCMAERLKEK+
Sbjct: 133  MLVTCAVRDGAEQRIRNRLKHLRAMKNK--------RSTRRHPLQLTLLGCMAERLKEKL 184

Query: 599  LDSDKMVDVVCGPDAYRDLPRLLQ-EVDYGQKGINTLLSLEETYADITPVRISDNSVTAF 775
            L+ ++ VDV+ GPD+Y+DLPRLL     YG   IN LLSL+ETYAD+ PVR++  S TAF
Sbjct: 185  LEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLLSLDETYADVMPVRLNSESPTAF 244

Query: 776  VSVMRGCNNMCSFCIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTS 955
            VS+MRGC+NMC++CIVPFT                  L   GVKEV LLGQNVNSY D +
Sbjct: 245  VSIMRGCDNMCTYCIVPFTRGRERSRPLASIVAEVKALAEQGVKEVTLLGQNVNSYRDRT 304

Query: 956  EVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDEL 1135
              EE +  K   +  GFS+  K K  G  FA LL  ++   P+MR RFTSPHPKDF DE+
Sbjct: 305  AQEEQDSLKATPVP-GFSTVYKPKTGGTPFAALLRSVAQAVPDMRIRFTSPHPKDFSDEV 363

Query: 1136 LYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFIS 1315
            L ++RD  N+CK +HLPAQSG+T+VLERM+RGY+REAYLELVQ IR  +P+VGLSSDFI 
Sbjct: 364  LEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIRQFLPNVGLSSDFIC 423

Query: 1316 GFCEETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELIN 1495
            GFC ETE++  DT+S+++ V Y++AY+FAYSMREKT AHR Y+DDVP +VK  RL  ++ 
Sbjct: 424  GFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRYKDDVPINVKNERLQRMVQ 483

Query: 1496 TFRETTRKIYDSQIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGA 1675
             FRE   +++    G  Q++L+EG +KR+ +   FG+ D   +V   S+ V  + +    
Sbjct: 484  VFREGATQLHRKMEGQEQLILIEGKSKRS-DAHWFGRNDANIKVIVPSIYVPISGDSTAR 542

Query: 1676 RKPVVGDFVEVKILRSSTASLSGEPIARTSL 1768
            +   VGDF+ V+I  S++  L G P+  +++
Sbjct: 543  KSFGVGDFLAVRIEESNSQVLKGTPLELSNI 573

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>Q09316:CK5P1_CAEEL CDK5RAP1-like protein - Caenorhabditis elegans|
          Length = 547

 Score =  399 bits (1026), Expect = e-110
 Identities = 219/493 (44%), Positives = 305/493 (61%), Gaps = 3/493 (0%)
 Frame = +2

Query: 299  IYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLN 478
            + + TYGCQMNV+DMEIV SIM K G+ +     E+A+I+ + TC+IRD AE+KVW +L 
Sbjct: 81   VCYVTYGCQMNVSDMEIVRSIMTKYGFVES-DKKENADIVLLMTCSIRDGAEKKVWNQLK 139

Query: 479  YFWFLKRQWKTNVAGGRSKSLRPPKIA-VLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
                            RS S+   +I  VLGCMAER++  +L+   +V++V GPD+YRDL
Sbjct: 140  LI--------------RSNSVNKGQIVGVLGCMAERVRHDLLEKRNLVNIVAGPDSYRDL 185

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
            PRL+     G  GIN  LSL+ETYAD+ P+R+   S TAF+S+MRGC+NMC++C+VPFT 
Sbjct: 186  PRLVAVAAGGSNGINVQLSLDETYADVQPIRVDSASKTAFISIMRGCDNMCTYCVVPFTR 245

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVE-ELEPGKNWQ-LSEGFS 1009
                             L   G K+V LLGQNVNSY D + ++  + P  + +    GF 
Sbjct: 246  GRERSRPIESIVEEVQRLRDQGYKQVTLLGQNVNSYRDMTSMDFSMAPSTSQEDRVPGFK 305

Query: 1010 SRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPA 1189
            +  K K+ GL F  LL++++   P++RFRFTSPHPKDFP +L+ L+  R N+CK +HLPA
Sbjct: 306  TVYKPKSGGLTFTTLLEKVADAAPDIRFRFTSPHPKDFPMQLIELIASRPNLCKQLHLPA 365

Query: 1190 QSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVR 1369
            QSG  E LERM+RGYTR+ YL LV  IR+V+P V L+SDFI+GFC ETE  H +TLS++R
Sbjct: 366  QSGDDETLERMERGYTRDLYLRLVDDIRHVLPSVSLTSDFIAGFCGETEQAHQNTLSLIR 425

Query: 1370 AVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQ 1549
            AV Y   ++F YSMR KT AH    DDVP DVK RR  +L   FRE   K+  + IG+ Q
Sbjct: 426  AVRYSFCFVFPYSMRGKTRAHHRLTDDVPEDVKARRHLDLTTVFREEALKLNQALIGSEQ 485

Query: 1550 VVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSST 1729
             VL+EG +KR       G+ D G +  F +  +          +P  G + ++ I  +++
Sbjct: 486  TVLLEGKSKRDASFS-HGRIDGGVKAVFDNSKL--------CLEP--GQYAKILITDANS 534

Query: 1730 ASLSGEPIARTSL 1768
             +L  + I ++S+
Sbjct: 535  QTLKAQLIGQSSI 547

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>O31778:YMCB_BACSU UPF0004 protein ymcB - Bacillus subtilis|
          Length = 509

 Score =  247 bits (630), Expect = 2e-64
 Identities = 167/489 (34%), Positives = 244/489 (49%), Gaps = 3/489 (0%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            + Y  TYGCQMN +D E++  I    GY +     + A +I +NTCAIR+NAE KV+  L
Sbjct: 67   KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMA--ERLKEKILDSDKMVDVVCGPDAYR 649
             +   LK+     + G            V GCM+  E +  +IL     VD++ G     
Sbjct: 126  GHLKALKKNNPDLILG------------VCGCMSQEESVVNRILKKHPFVDMIFGTHNIH 173

Query: 650  DLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPF 829
             LP LL E    ++ +  + S E    +  P ++ +  +  +V++M GC+  C++CIVP+
Sbjct: 174  RLPELLSEAYLSKEMVVEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIVPY 232

Query: 830  TXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFS 1009
            T                  L   G KE+ LLGQNVN+Y    + E++  G          
Sbjct: 233  TRGKERSRRPEDIIQEVRRLASEGYKEITLLGQNVNAYG--KDFEDMTYG---------- 280

Query: 1010 SRCKVKNTGLRFADLLDQL-SLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLP 1186
                         DL+D+L  ++ P  R RFT+ HP+DF D L+ ++    N+   IHLP
Sbjct: 281  -----------LGDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHIHLP 327

Query: 1187 AQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIV 1366
             QSGS+EVL+ M R Y RE Y+ELV+KI+  +P+  L++D I GF  ET++   +TLS+ 
Sbjct: 328  VQSGSSEVLKLMARKYDRERYMELVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSLY 387

Query: 1367 RAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTT 1546
            R V +D AY F YS RE T A +  +D+VP  VK+ RL  L     E + K      G  
Sbjct: 388  REVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYEGKV 446

Query: 1547 QVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSS 1726
              VLVEG +K  P+  L G T++   V+F               K  +G  V VKI ++ 
Sbjct: 447  VEVLVEGESKNNPDI-LAGYTEKSKLVNFK------------GPKEAIGKIVRVKIQQAK 493

Query: 1727 TASLSGEPI 1753
            T SL GE +
Sbjct: 494  TWSLDGEMV 502

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>O83735:Y754_TREPA UPF0004 protein TP_0754 - Treponema pallidum|
          Length = 456

 Score =  243 bits (620), Expect = 2e-63
 Identities = 158/448 (35%), Positives = 232/448 (51%), Gaps = 9/448 (2%)
 Frame = +2

Query: 302  YHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNY 481
            + ETYGCQMNV +   V  ++   G+   V D ++ +++ INTC++R  AE +V+ RL  
Sbjct: 4    FFETYGCQMNVAESASVEQLLLARGWTKAV-DAQTCDVLIINTCSVRITAETRVFGRLGL 62

Query: 482  FWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPR 661
            F  LK++             R   I ++GCMA+RL +KI      +D V G  A+     
Sbjct: 63   FSSLKKK-------------RAFFIILMGCMAQRLHDKIQQQFPRIDYVVGTFAHARFES 109

Query: 662  LLQEVDYG--QKGINTLLSLEETYAD--ITPVRI-----SDNSVTAFVSVMRGCNNMCSF 814
            + QE++    QK       + E Y +  ++  R      S+ S  +F+ +M GCNN CSF
Sbjct: 110  IFQEIEQKLTQKDYRFEF-ISERYREHPVSGYRFFASSYSEGSFQSFIPIMNGCNNFCSF 168

Query: 815  CIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQL 994
            CIVP+                   L   GV+E+ LLGQNVNSY        +      QL
Sbjct: 169  CIVPYVRGREISRDLDAILQEVDVLSEKGVREITLLGQNVNSYRGRDREGNIVTFP--QL 226

Query: 995  SEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKL 1174
                  RC+VK          DQ+         RF S HPKD  D+L+  +     +C+L
Sbjct: 227  LRHLVRRCEVK----------DQIKW------IRFVSSHPKDLSDDLIATIAQESRLCRL 270

Query: 1175 IHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADT 1354
            +HLP Q G+  VL+RM+R YTRE YL LV K++  +P+V LS+D + GF  ETE+D   T
Sbjct: 271  VHLPVQHGANGVLKRMRRSYTREQYLSLVGKLKASVPNVALSTDILIGFPGETEEDFEQT 330

Query: 1355 LSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQ 1534
            L ++R V +D A+M+ Y+ RE T A+ ++ D +P+  +  RL  +I     TT K   ++
Sbjct: 331  LDLMREVEFDSAFMYHYNPREGTPAY-DFPDRIPDATRIARLQRVIALQMSTTLKKMRAR 389

Query: 1535 IGTTQVVLVEGPNKRAPETELFGKTDRG 1618
            +G T  VLVE  ++  PE ELFG T+ G
Sbjct: 390  VGKTLPVLVESRSRNNPE-ELFGHTELG 416

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>Q89AC2:Y392_BUCBP UPF0004 protein bbp_392 - Buchnera aphidicola subsp. Baizongia|
            pistaciae
          Length = 445

 Score =  242 bits (617), Expect = 5e-63
 Identities = 166/489 (33%), Positives = 247/489 (50%), Gaps = 2/489 (0%)
 Frame = +2

Query: 284  VKKGRIYHETYGCQMNVNDMEIVLSIMK-KEGYNDIVPDPESAEIIFINTCAIRDNAEQK 460
            +K  +IY +T+GCQMN  D  ++  I+K K GY +   DP+ A ++ +NTC+IR+ A++K
Sbjct: 1    MKNNKIYIKTWGCQMNEYDSALITQILKQKHGYEN-TKDPKLANVLILNTCSIREKAQEK 59

Query: 461  VWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPD 640
            V+ +L   W   +Q   N+            IAV GC+A +  + I      VD++ G  
Sbjct: 60   VFHQLGR-WKKLKQKNPNLI-----------IAVGGCVATQEGKNIYKRANYVDIIFGTQ 107

Query: 641  AYRDLPRLLQEVDYGQKGINTL-LSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFC 817
                LP ++QEV   +K +  +   L E +  I   R     VTAFVS+M GCN  CSFC
Sbjct: 108  TLHYLPNMIQEVKKNKKSVTNIDFPLTEKFNFIEYPR--KPKVTAFVSIMEGCNKFCSFC 165

Query: 818  IVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLS 997
            IVP+T                  L   GVKE+ LLGQNVNSY           GK +   
Sbjct: 166  IVPYTRGHEISRPVDDILLEISTLSSRGVKEIHLLGQNVNSYK----------GKTFN-- 213

Query: 998  EGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLI 1177
                  CK  N  LR    +D +       R RFT+ +P +F D+++ +  +   I   +
Sbjct: 214  ---GDICKFSNL-LRLVASIDGID------RIRFTTSNPFEFTDDIIEIYAEIPKIVSFL 263

Query: 1178 HLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTL 1357
            HLP QSGS  +L+ MKR +T + Y  ++ KI  + P++ +SSDFI GF  ET  D   TL
Sbjct: 264  HLPVQSGSNRILQLMKRMHTIDEYKTIINKILKLRPNIQISSDFIIGFPGETLIDFEQTL 323

Query: 1358 SIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQI 1537
             +++ +  DM+Y F YS R  T A    +D+V    KQ+RL  L    R  T       +
Sbjct: 324  QLIKDLNIDMSYSFIYSPRPGTPA-SELQDNVTLCEKQKRLHILQTLIRNNTTMWNQKML 382

Query: 1538 GTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKIL 1717
            G+ Q VLVEG +++ P+ ELFG+T+    V+F               + ++G+F+ +KI 
Sbjct: 383  GSIQSVLVEGRSQKNPK-ELFGRTENNRIVNFK------------GNQNMIGEFINLKIT 429

Query: 1718 RSSTASLSG 1744
            + +  SL G
Sbjct: 430  KINPNSLRG 438

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>Q9L699:Y1001_PASMU UPF0004 protein PM1001 - Pasteurella multocida|
          Length = 474

 Score =  239 bits (610), Expect = 4e-62
 Identities = 156/490 (31%), Positives = 242/490 (49%), Gaps = 4/490 (0%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            +++ +T+GCQMN  D   +  ++      ++   PE A+++ +NTC+IR+ A++KV+ +L
Sbjct: 4    KLHIKTWGCQMNEYDSSKMADLLNSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPK----IAVLGCMAERLKEKILDSDKMVDVVCGPDA 643
                            GR K L+  K    I V GC+A +  E I      VD++ GP  
Sbjct: 64   ----------------GRWKELKKHKPGLVIGVGGCVASQEGEHIRTRAPYVDIIFGPQT 107

Query: 644  YRDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIV 823
               LP ++ ++  G+  +  +   E    D  P   ++   TAFVS+M GCN  CSFC+V
Sbjct: 108  LHRLPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVV 166

Query: 824  PFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEG 1003
            P+T                  L   GV+EV LLGQNVN+Y   +  + +           
Sbjct: 167  PYTRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYRGATHDDGI----------- 215

Query: 1004 FSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHL 1183
                         FA+LL  ++      R RFT+ HP +F D+++ + RD   +   +HL
Sbjct: 216  -----------CTFAELLRLVAAIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHL 264

Query: 1184 PAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSI 1363
            P QSGS  VL  MKR +T   Y  +++K+R V P++ +SSDFI GF  ET +D   T+++
Sbjct: 265  PVQSGSDRVLSMMKRNHTALEYKSIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMNL 324

Query: 1364 VRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGT 1543
            +  V +DM++ F YS R  T A  +  DDV  + K++RL  L         +   + +GT
Sbjct: 325  IAQVNFDMSFSFIYSARPGTPA-ADMPDDVTEEEKKQRLYVLQQRINNQAAQFSRAMLGT 383

Query: 1544 TQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRS 1723
             Q VLVEGP+K+    EL G+T+    V+F   P             ++G FV++KI   
Sbjct: 384  EQRVLVEGPSKK-DLMELTGRTETNRIVNFVGTP------------DMIGKFVDIKITDV 430

Query: 1724 STASLSGEPI 1753
             T SL GE +
Sbjct: 431  FTNSLRGEVV 440

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>Q57163:Y019_HAEIN UPF0004 protein HI0019 - Haemophilus influenzae|
          Length = 474

 Score =  238 bits (608), Expect = 6e-62
 Identities = 157/486 (32%), Positives = 242/486 (49%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            +++ +T+GCQMN  D   +  ++      ++   PE A+++ +NTC+IR+ A++KV+ +L
Sbjct: 4    KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEAPEEADVLLLNTCSIREKAQEKVFHQL 63

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
              +  LK+     V G            V GC+A +  E I      VD++ GP     L
Sbjct: 64   GRWKELKKNNPNLVIG------------VGGCVASQEGEHIRHRAPYVDIIFGPQTLHRL 111

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
            P ++ ++  G+  +  +   E    D  P   ++   TAFVS+M GCN  C+FC+VP+T 
Sbjct: 112  PEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTFCVVPYTR 170

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                             L   GV+EV LLGQNVN+Y          P  + Q+       
Sbjct: 171  GEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYRG--------PTHDGQICS----- 217

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
                     FA+LL  ++      R RFT+ HP +F D+++ + RD   +   +HLP Q+
Sbjct: 218  ---------FAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQA 268

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
            GS  VL  MKR +T   Y  +++K+R V PD+ +SSDFI GF  ET +D   T++++  V
Sbjct: 269  GSDRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQV 328

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVV 1555
             +DM++ F YS R  T A  +  DDV  D K++RL  L     +   +     +GT Q V
Sbjct: 329  NFDMSFSFVYSARPGTPA-ADMPDDVTEDEKKQRLYVLQERINQQAAQFSRRMLGTEQRV 387

Query: 1556 LVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTAS 1735
            LVEGP+K+    EL G+T+    V+F   P             ++G FV+VKI    T S
Sbjct: 388  LVEGPSKK-DIMELTGRTETNRIVNFQGSP------------EMIGKFVDVKITDVYTNS 434

Query: 1736 LSGEPI 1753
            L GE +
Sbjct: 435  LRGEVV 440

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>O66638:Y284_AQUAE UPF0004 protein aq_284 - Aquifex aeolicus|
          Length = 440

 Score =  230 bits (587), Expect = 2e-59
 Identities = 149/485 (30%), Positives = 239/485 (49%), Gaps = 1/485 (0%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            + + +T+GCQMN ND E +  ++K  GY     + E A++I +NTC IR+  +QKV   L
Sbjct: 4    KFFIKTFGCQMNFNDSERIRGLLKTIGYEQ-TDNWEEADLIILNTCTIREKPDQKVLSHL 62

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
              +  +K +          K+L    IAV GC+A+R   +++    ++D++        L
Sbjct: 63   GEYKKIKEK--------NPKAL----IAVAGCLAQRTGWELVKKAPVIDIMFSSFNMHQL 110

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRIS-DNSVTAFVSVMRGCNNMCSFCIVPFT 832
            P L+ +   G K I  L  L +    I    +  DN   A+V++++GC+  C++C+VP T
Sbjct: 111  PELINQAQAGYKAIAILDELPQDEDKIWEYPVERDNKYCAYVTIIKGCDKNCTYCVVPRT 170

Query: 833  XXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSS 1012
                              L   GV+E+ LLGQNV ++           GK+++       
Sbjct: 171  RGKERSRALHSILDEVKRLVDDGVREIHLLGQNVTAW-----------GKDFEKP----- 214

Query: 1013 RCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQ 1192
                    + F++LL Q+S      R RFT+ HP+D  D+++  M D   +C  +HLP Q
Sbjct: 215  --------IPFSELLYQVSKIDGVERIRFTTGHPRDLTDDIIEAMADIPQVCNALHLPFQ 266

Query: 1193 SGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRA 1372
            +GS  +L  M RGYT+E YLE ++K++  + D+ +S+D I GF  ETE+D   TL +++ 
Sbjct: 267  AGSNRILALMDRGYTKEEYLEKIEKLKEKVKDIAMSTDVIVGFPTETEEDFEHTLDVLKK 326

Query: 1373 VGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQV 1552
            V ++  + F +S R  T A    E  +P+DVK  R+  L+   +    +I     GT Q 
Sbjct: 327  VRFEQVFSFKFSPRPGTPA-AEMEGQIPDDVKTERMRRLLELQKSILSEIAKKYEGTVQE 385

Query: 1553 VLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTA 1732
            VLVE         EL G+T      SF   P             ++G  V++K+++SS  
Sbjct: 386  VLVE----EEKNGELIGRTTTNKWASFKGDP------------SLLGKIVKIKVIKSSPF 429

Query: 1733 SLSGE 1747
            SL GE
Sbjct: 430  SLEGE 434

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>P57516:Y441_BUCAI UPF0004 protein BU441 - Buchnera aphidicola subsp. Acyrthosiphon|
            pisum (Acyrthosiphon pisum symbiotic bacterium)
          Length = 439

 Score =  229 bits (585), Expect = 3e-59
 Identities = 150/487 (30%), Positives = 244/487 (50%), Gaps = 4/487 (0%)
 Frame = +2

Query: 299  IYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLN 478
            IY +T+GCQMN  D  +++++++K     +    E+A+I+ +NTC+IR+ A++KV+ +L 
Sbjct: 4    IYIKTWGCQMNEYDSSMIITLLEKNNQYSLTKSAENADILILNTCSIREKAQEKVFHQLG 63

Query: 479  YFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLP 658
                   +WK  +     K +    IAV GC+A +  ++I      VD++ G      LP
Sbjct: 64   -------RWK-KIKNNNPKVI----IAVGGCVATQEGKEIFKRANYVDIIFGTQTLHRLP 111

Query: 659  RLLQEVDYGQKGINTLLSLEETYADITPVRI----SDNSVTAFVSVMRGCNNMCSFCIVP 826
            +++ EV+  +K     LS++ ++  +   +          TA +S+M GCN  CSFC+VP
Sbjct: 112  KMIDEVEKKRK-----LSIDISFPKLEKFKYFLAPKKKGYTADISIMEGCNKYCSFCVVP 166

Query: 827  FTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGF 1006
            +T                  L   G+KE+ LLGQNVN+Y   +                F
Sbjct: 167  YTRGNEISRPCDDVLFEISLLAKQGIKEINLLGQNVNAYQGPT----------------F 210

Query: 1007 SSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLP 1186
            + +    +  +R    +D +       R RFT+ +P +F D+++ + +D   +   +HLP
Sbjct: 211  NGKVCYFSELIRLVAEIDGIE------RIRFTTSNPLEFTDDIIEVYKDTPKLVSFLHLP 264

Query: 1187 AQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIV 1366
             QSGS ++L  MKR YT E Y  +++K+    PD+ +SSDFI GF  E+E D   T+  +
Sbjct: 265  VQSGSNKILNLMKRSYTTEDYTSIIKKLTIARPDIQISSDFIVGFPGESEIDFEKTIEFI 324

Query: 1367 RAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTT 1546
            + + +DM++ F YS R  T A  N  DD+    K+RRL  L       T        G+ 
Sbjct: 325  KNINFDMSFSFIYSARPGTPA-SNMNDDLDLKEKKRRLYILQERINIQTMLWSRKMFGSI 383

Query: 1547 QVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSS 1726
            Q VLVEG + +    +L+G+T+    V+F            G+ K ++G FV VKI +  
Sbjct: 384  QSVLVEGVSDK-NIMDLYGRTENNRVVTF-----------QGSSK-MIGQFVNVKIKKVH 430

Query: 1727 TASLSGE 1747
            T SL GE
Sbjct: 431  THSLKGE 437

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>Q8K9C2:Y426_BUCAP UPF0004 protein BUsg_426 - Buchnera aphidicola subsp. Schizaphis|
            graminum
          Length = 439

 Score =  227 bits (579), Expect = 1e-58
 Identities = 151/488 (30%), Positives = 251/488 (51%), Gaps = 3/488 (0%)
 Frame = +2

Query: 299  IYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLN 478
            IY +T+GCQMN  D  ++   ++K G   I  + E A+I+ +NTC+IR+ A++KV+ +L 
Sbjct: 4    IYIKTWGCQMNEYDSSMITVFLEKTGRYLITKEVEKADILILNTCSIREKAQEKVFHQLG 63

Query: 479  YFWFLKRQWKTNVAGGRSKSLRPPKI-AVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
                   +WK      + K+ +P  I AV GC+A +  ++I      VD+V G      L
Sbjct: 64   -------RWK------KLKNKKPDVIIAVGGCVATQEGKEIFKRANYVDIVFGTQTLHKL 110

Query: 656  PRLLQEVDYGQKGINTLL--SLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPF 829
             +++ +V+  ++ +  +    LE+    + P +      TA +S+M GCN  CSFC+VP+
Sbjct: 111  AQMIDKVEKNRRFMIDISFPQLEKFNYSLEPKK---TGYTASISIMEGCNKYCSFCVVPY 167

Query: 830  TXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFS 1009
            T                  L   GV+E+ LLGQNVN+Y   +                F+
Sbjct: 168  TRGHEISRPSDDILLEISILAENGVREINLLGQNVNAYRGRT----------------FN 211

Query: 1010 SRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPA 1189
             +    +  LR    +D +       R RFT+ +P +F D+++ + +D   +   +HLP 
Sbjct: 212  GKICFFSELLRLVSEIDGID------RIRFTTSNPLEFTDDIIEVYQDTPKLVSFLHLPV 265

Query: 1190 QSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVR 1369
            QSGS  +L+ MKR YT E Y ++++K+     ++ +SSDFI GF  E+E+D   T++ ++
Sbjct: 266  QSGSNRILQLMKRSYTTEEYEKIIEKLILARSNIQISSDFIVGFPSESEEDFQKTINFIK 325

Query: 1370 AVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQ 1549
             + +DM++ F YS R  T A    +D++    K++RL  L N   + T       + +TQ
Sbjct: 326  KINFDMSFSFIYSSRPGTPA-SEMKDNIDLQEKKKRLYTLQNCINKQTMSWSRKMLKSTQ 384

Query: 1550 VVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSST 1729
             VLVEG +K+    EL+GKT+    V+F            G+ K ++G F+++KI +  T
Sbjct: 385  SVLVEGVSKK-NIMELYGKTENNRIVTF-----------KGSHK-MIGKFIKLKIKKVHT 431

Query: 1730 ASLSGEPI 1753
             SL GE I
Sbjct: 432  HSLQGELI 439

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>Q9ZCE8:Y808_RICPR UPF0004 protein RP808 - Rickettsia prowazekii|
          Length = 445

 Score =  222 bits (566), Expect = 4e-57
 Identities = 149/484 (30%), Positives = 226/484 (46%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            ++Y +TYGCQMNV D   +  ++   GY     D + A+II +NTC IR+ A +K +  L
Sbjct: 4    KLYIKTYGCQMNVYDSVKIQDLLYPFGYES-TEDIKEADIIILNTCHIREKAAEKTYSEL 62

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
                 +K+   T     + + L P  I V GC+A+   E+I      VD+V GP +Y +L
Sbjct: 63   GR---IKKLQNTR----KQEGLNPAIIVVAGCVAQAEGEEIFSRTPYVDIVVGPQSYYNL 115

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
            P L+ +V   +K +  L  +EE   D  P ++     ++F+SV  GC+  C+FC+VP+T 
Sbjct: 116  PELISKVVRHEKQLIDLDFVEEAKFDNLPEQLYPQGASSFISVQEGCDKFCTFCVVPYTR 175

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                                   KE++LLGQNVN+Y+     +++               
Sbjct: 176  GAEFSRSVEQVYRESLKAVSNDAKEIILLGQNVNAYHGKGPKDKI--------------- 220

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
                      ADLL  L+      R R+ + HP D  D+L+ L      +   +HLP QS
Sbjct: 221  -------FTLADLLKCLAQIPNLARLRYMTSHPIDMTDDLIKLHGTEPKLMPFLHLPVQS 273

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
            GS ++L+ M R + R+ Y  ++ ++R    D+ LSSDFI GF  ETE D  DTL +V  V
Sbjct: 274  GSNKILKAMNRKHDRDYYFNIINRLREARSDIVLSSDFIVGFPGETEQDFEDTLDLVHRV 333

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVV 1555
             Y   Y F YS R  T       D +P  +K +RL  L             S +G+T  V
Sbjct: 334  KYGQCYSFKYSPRPGTPGAIR-TDQIPEHIKSKRLTILQQELATQQLAFNQSCVGSTMRV 392

Query: 1556 LVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTAS 1735
            L +   K   E ++ GKT           P   +       K ++G  V+V I +++  S
Sbjct: 393  LFDRDGKF--EDQIIGKT-----------PYMQSVYIHNPNKSLLGKIVDVIITKAALNS 439

Query: 1736 LSGE 1747
            L+GE
Sbjct: 440  LTGE 443

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>P0AEI1:YLEA_ECOLI UPF0004 protein yleA - Escherichia coli|
          Length = 474

 Score =  220 bits (561), Expect = 2e-56
 Identities = 148/486 (30%), Positives = 237/486 (48%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            +++ +T+GCQMN  D   +  ++       +    E A+++ +NTC+IR+ A++KV+ +L
Sbjct: 4    KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 63

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
              +  LK +    + G            V GC+A +  E I      VD++ GP     L
Sbjct: 64   GRWKLLKEKNPDLIIG------------VGGCVASQEGEHIRQRAHYVDIIFGPQTLHRL 111

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
            P ++  V   +  +  +   E    D  P   ++   TAFVS+M GCN  C++C+VP+T 
Sbjct: 112  PEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTYCVVPYTR 170

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                             L   GV+EV LLGQNVN++           G+N+  + G    
Sbjct: 171  GEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWR----------GENYDGTTG---- 216

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
                     FADLL  ++      R RFT+ HP +F D+++ + RD   +   +HLP QS
Sbjct: 217  --------SFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQS 268

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
            GS  +L  M R +T   Y  +++K+R   PD+ +SSDFI GF  ET +D   T+ ++  V
Sbjct: 269  GSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADV 328

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVV 1555
             +DM+Y F +S R  T A  +  DDVP + K++RL  L     +         +GTTQ +
Sbjct: 329  NFDMSYSFIFSARPGTPA-ADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRI 387

Query: 1556 LVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTAS 1735
            LVEG ++++   EL G+T+    V+F   P             ++G FV+V+I      S
Sbjct: 388  LVEGTSRKS-IMELSGRTENNRVVNFEGTP------------DMIGKFVDVEITDVYPNS 434

Query: 1736 LSGEPI 1753
            L G+ +
Sbjct: 435  LRGKVV 440

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>P0AEI2:YLEA_ECOL6 UPF0004 protein yleA - Escherichia coli O6|
          Length = 474

 Score =  220 bits (561), Expect = 2e-56
 Identities = 148/486 (30%), Positives = 237/486 (48%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            +++ +T+GCQMN  D   +  ++       +    E A+++ +NTC+IR+ A++KV+ +L
Sbjct: 4    KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 63

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
              +  LK +    + G            V GC+A +  E I      VD++ GP     L
Sbjct: 64   GRWKLLKEKNPDLIIG------------VGGCVASQEGEHIRQRAHYVDIIFGPQTLHRL 111

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
            P ++  V   +  +  +   E    D  P   ++   TAFVS+M GCN  C++C+VP+T 
Sbjct: 112  PEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTYCVVPYTR 170

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                             L   GV+EV LLGQNVN++           G+N+  + G    
Sbjct: 171  GEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWR----------GENYDGTTG---- 216

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
                     FADLL  ++      R RFT+ HP +F D+++ + RD   +   +HLP QS
Sbjct: 217  --------SFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQS 268

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
            GS  +L  M R +T   Y  +++K+R   PD+ +SSDFI GF  ET +D   T+ ++  V
Sbjct: 269  GSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADV 328

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVV 1555
             +DM+Y F +S R  T A  +  DDVP + K++RL  L     +         +GTTQ +
Sbjct: 329  NFDMSYSFIFSARPGTPA-ADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRI 387

Query: 1556 LVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTAS 1735
            LVEG ++++   EL G+T+    V+F   P             ++G FV+V+I      S
Sbjct: 388  LVEGTSRKS-IMELSGRTENNRVVNFEGTP------------DMIGKFVDVEITDVYPNS 434

Query: 1736 LSGEPI 1753
            L G+ +
Sbjct: 435  LRGKVV 440

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>P0AEI3:YLEA_ECO57 UPF0004 protein yleA - Escherichia coli O157:H7|
          Length = 474

 Score =  220 bits (561), Expect = 2e-56
 Identities = 148/486 (30%), Positives = 237/486 (48%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            +++ +T+GCQMN  D   +  ++       +    E A+++ +NTC+IR+ A++KV+ +L
Sbjct: 4    KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 63

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
              +  LK +    + G            V GC+A +  E I      VD++ GP     L
Sbjct: 64   GRWKLLKEKNPDLIIG------------VGGCVASQEGEHIRQRAHYVDIIFGPQTLHRL 111

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
            P ++  V   +  +  +   E    D  P   ++   TAFVS+M GCN  C++C+VP+T 
Sbjct: 112  PEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTYCVVPYTR 170

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                             L   GV+EV LLGQNVN++           G+N+  + G    
Sbjct: 171  GEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWR----------GENYDGTTG---- 216

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
                     FADLL  ++      R RFT+ HP +F D+++ + RD   +   +HLP QS
Sbjct: 217  --------SFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQS 268

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
            GS  +L  M R +T   Y  +++K+R   PD+ +SSDFI GF  ET +D   T+ ++  V
Sbjct: 269  GSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADV 328

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVV 1555
             +DM+Y F +S R  T A  +  DDVP + K++RL  L     +         +GTTQ +
Sbjct: 329  NFDMSYSFIFSARPGTPA-ADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRI 387

Query: 1556 LVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTAS 1735
            LVEG ++++   EL G+T+    V+F   P             ++G FV+V+I      S
Sbjct: 388  LVEGTSRKS-IMELSGRTENNRVVNFEGTP------------DMIGKFVDVEITDVYPNS 434

Query: 1736 LSGEPI 1753
            L G+ +
Sbjct: 435  LRGKVV 440

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>P73127:Y996_SYNY3 UPF0004 protein sll0996 - Synechocystis sp. (strain PCC 6803)|
          Length = 451

 Score =  219 bits (559), Expect = 3e-56
 Identities = 163/492 (33%), Positives = 255/492 (51%), Gaps = 5/492 (1%)
 Frame = +2

Query: 296  RIYHE-TYGCQMNVNDMEIVLSIMKKEG--YNDIVPDPESAEIIFINTCAIRDNAEQKVW 466
            R YH  T+GCQMN  D E +  I++  G  Y D   DP  A+++  NTC+IRDNAEQKV+
Sbjct: 6    RRYHIITFGCQMNKADSERMAGILENLGMTYTD---DPNQADLVLYNTCSIRDNAEQKVY 62

Query: 467  QRLNYFWFLKRQWKTNVAGGRSKSLRPP-KIAVLGCMAERLKEKILDSDKMVDVVCGPDA 643
                   +L RQ K        K + P   + V GC+A++  E++L     +D+V GP  
Sbjct: 63   S------YLGRQAKR-------KQVEPELTLVVAGCVAQQEGEQLLRRVPELDLVMGPQH 109

Query: 644  YRDLPRLLQEVDYGQKGINT-LLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCI 820
               L +LL++V  G + + T  L + E   DIT  R  +++V+A+V+++ GCN  CS+C+
Sbjct: 110  ANRLDQLLEQVWAGSQVVATESLHIME---DITKPR-RESTVSAWVNIIYGCNERCSYCV 165

Query: 821  VPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSE 1000
            VP                    L   G KEV LLGQN+++Y           G++     
Sbjct: 166  VPNVRGVEQSRTPEAIYGEMEVLAQQGFKEVTLLGQNIDAY-----------GRDLP--- 211

Query: 1001 GFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIH 1180
            G +   +  +T     DLL  +       R RF + HP+ F + L+   ++   +C+  H
Sbjct: 212  GTTPSGRHLHT---LTDLLYHVHDIEGIDRLRFATSHPRYFTERLIQACQELPKVCEHFH 268

Query: 1181 LPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLS 1360
            +P QSG  ++L+ MKRGYTRE YL++++KIR  +PD  +S+D I GF  ETE    +TL+
Sbjct: 269  IPFQSGDNDILKAMKRGYTREKYLQIIEKIRRYMPDAAISADVIVGFPGETEAQFENTLN 328

Query: 1361 IVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIG 1540
            ++  VG+D+    AYS R  T A   +++ +  +VK  RL  L +       +     +G
Sbjct: 329  LIEEVGFDLLNTAAYSPRPGTPA-AFWDNQLSEEVKGDRLQRLNHLVSTQAMERSQRYLG 387

Query: 1541 TTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILR 1720
              + VLVEG N ++P  ++ G+T RG+R++F            G    ++G  V VKI  
Sbjct: 388  RVEEVLVEGENLKSP-GQVMGRT-RGNRLTFF----------QGEISELLGKTVPVKITE 435

Query: 1721 SSTASLSGEPIA 1756
            +   SL+GE ++
Sbjct: 436  ARAFSLTGEALS 447

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>P56131:Y269_HELPY UPF0004 protein HP_0269 - Helicobacter pylori (Campylobacter pylori)|
          Length = 437

 Score =  216 bits (551), Expect = 2e-55
 Identities = 150/481 (31%), Positives = 235/481 (48%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            ++Y ET GC MN  D E +LS + K  Y +   DP++A++I INTC++R+  E+K++  +
Sbjct: 2    KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TNDPKTADLILINTCSVREKPERKLFSEI 60

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
              F  +K   K N            KI V GC A  +   IL     V  V G    R++
Sbjct: 61   GQFAKIK---KPNA-----------KIGVCGCTASHMGADILKKAPSVSFVLGA---RNV 103

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
             ++ Q + + +K +   +  +E+ A           + + +++  GC+  C++CIVP T 
Sbjct: 104  SKISQVI-HKEKAVEVAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTR 161

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                             L   G KE+MLLGQNVN+Y                      +R
Sbjct: 162  GKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYG---------------------AR 200

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
               ++  + F+DLLD+LS      R RFTSPHP    D  L        +CK IH+P QS
Sbjct: 201  FSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQS 260

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
            GS+ VL+ M+RGY++E +L  V++++ ++P+VG+S+D I GF  E++ D  DT+ ++  V
Sbjct: 261  GSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKV 320

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVV 1555
             +D  Y F YS R  T A   +++ VP +V   RL  L N  +E   +    ++G T VV
Sbjct: 321  RFDTLYSFIYSPRPFTEAGA-WKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVV 379

Query: 1556 LVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTAS 1735
            LVE  N+R  + ++ G   R     F  +           R P  G+ V+V+I+  S   
Sbjct: 380  LVE--NRREMDNQIVGFEGRSDTGKFIEVTCKE------KRNP--GELVKVEIISHSKGR 429

Query: 1736 L 1738
            L
Sbjct: 430  L 430

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>Q51470:Y3980_PSEAE UPF0004 protein PA3980 - Pseudomonas aeruginosa|
          Length = 446

 Score =  215 bits (548), Expect = 5e-55
 Identities = 154/490 (31%), Positives = 236/490 (48%), Gaps = 1/490 (0%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            +++ ET+GCQMN  D   +  ++ +    ++  +   A++I +NTC+IR+ A++KV+ +L
Sbjct: 4    KLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVILLNTCSIREKAQEKVFSKL 63

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
              +  LK+Q    V G            V GC+A +    I +    VDVV GP     L
Sbjct: 64   GMWRELKQQNPDLVIG------------VGGCVASQEGAAIRERAPYVDVVFGPQTLHRL 111

Query: 656  PRLLQEVDYGQKG-INTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFT 832
            P ++      +K  ++      E +  +   R+  +  TAFVSVM GC+  CSFC+VP+T
Sbjct: 112  PEMIDAARSTRKPQVDVSFPEIEKFDRLPEPRV--DGPTAFVSVMEGCSKYCSFCVVPYT 169

Query: 833  XXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSS 1012
                              L   GV+EV LLGQNVN +   +    L              
Sbjct: 170  RGEEVSRPFDDVIAEVIHLAENGVREVTLLGQNVNGFRGLTHDGRLAD------------ 217

Query: 1013 RCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQ 1192
                      FA+LL  ++      R R+T+ HP +F D L+    +   + K IHLP Q
Sbjct: 218  ----------FAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQ 267

Query: 1193 SGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRA 1372
            SGS  VL  MKR +T   Y   ++K++  +PD+ +SSDFI GF  ETE D   T+ +V  
Sbjct: 268  SGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVED 327

Query: 1373 VGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQV 1552
            VG+D ++ F YS R  T A  +  DD+P +VK++RL  L +   +   +I    +G+TQ 
Sbjct: 328  VGFDFSFSFIYSARPGTPA-ADLADDLPEEVKKQRLQILQSRIHQQGYEISRRMVGSTQR 386

Query: 1553 VLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTA 1732
            +LV   +K+ P   L G+T+    V+F           D  R  ++G F +V I  +   
Sbjct: 387  ILVTDFSKKDPGM-LQGRTENNRIVNFRC---------DNPR--LIGQFAQVHIDDALPH 434

Query: 1733 SLSGEPIART 1762
            SL G  I  T
Sbjct: 435  SLRGTLIDST 444

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>Q9ZMG6:Y269_HELPJ UPF0004 protein jhp_0254 - Helicobacter pylori J99 (Campylobacter|
            pylori J99)
          Length = 437

 Score =  214 bits (546), Expect = 9e-55
 Identities = 150/484 (30%), Positives = 233/484 (48%), Gaps = 3/484 (0%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            ++Y ET GC MN  D E +LS + K  Y +   DP+ A++I INTC++R+  E+K++  +
Sbjct: 2    KVYIETMGCAMNSRDSEHLLSELSKLDYKE-TSDPKMADLILINTCSVREKPERKLFSEI 60

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
              F  +K   K N            KI V GC A  +   IL     V  V G    R++
Sbjct: 61   GQFAKIK---KPNA-----------KIGVCGCTASHMGADILKKAPSVSFVLGA---RNV 103

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
             ++ Q + + +K +   +  +E+ A           + + +++  GC+  C++CIVP T 
Sbjct: 104  SKISQVI-HKEKAVEVAIDYDES-AYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTR 161

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                             L   G KE+MLLGQNVN+Y      E  + G            
Sbjct: 162  GKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGVRFSSEHAKVG------------ 209

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
                     F+DLLD+LS      R RFTSPHP    D  L        +CK IH+P QS
Sbjct: 210  ---------FSDLLDKLSEIQGIERIRFTSPHPLHMNDAFLERFAQNPKVCKSIHMPLQS 260

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
            GS+ VL+ M+RGY++E +L  V++++ ++P+VG+S+D I GF  E++ D  DT+ ++  V
Sbjct: 261  GSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKV 320

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVV 1555
             +D  Y F YS R  T A   +++ VP ++   RL  L N  +E   +    ++G T VV
Sbjct: 321  RFDTLYSFIYSPRPFTEAGA-WKERVPLEISSLRLERLQNRHKEILEEKAKLEVGKTHVV 379

Query: 1556 LVEGPNKRAPETELF---GKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSS 1726
            LVE  N+R  + ++    G++D G  +  T              K   G+ V V+I+  S
Sbjct: 380  LVE--NRREMDGQIVGFEGRSDTGKFIEVTC-----------KEKKNPGELVRVEIISHS 426

Query: 1727 TASL 1738
               L
Sbjct: 427  KGRL 430

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>P67086:Y2752_MYCBO UPF0004 protein Mb2752c - Mycobacterium bovis|
          Length = 512

 Score =  213 bits (542), Expect = 3e-54
 Identities = 152/504 (30%), Positives = 233/504 (46%), Gaps = 3/504 (0%)
 Frame = +2

Query: 311  TYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWF 490
            TYGCQMNV+D E +  +++  GY     D   A+++  NTCA+R+NA+ +++  L++   
Sbjct: 31   TYGCQMNVHDSERLAGLLEAAGYRRAT-DGSEADVVVFNTCAVRENADNRLYGNLSHL-- 87

Query: 491  LKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQ 670
                        R ++    +IAV GC+A++ ++ +L     VDVV G      LP LL+
Sbjct: 88   ----------APRKRANPDMQIAVGGCLAQKDRDAVLRRAPWVDVVFGTHNIGSLPTLLE 137

Query: 671  EVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXXX 850
               + +     +    + +    P    +++  A+VS+  GCNN C+FCIVP        
Sbjct: 138  RARHNKVAQVEIAEALQQFPSSLPSS-RESAYAAWVSISVGCNNSCTFCIVPSLRGREVD 196

Query: 851  XXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKN 1030
                        L   GV EV LLGQNVN+Y  +                 F+     +N
Sbjct: 197  RSPADILAEVRSLVNDGVLEVTLLGQNVNAYGVS-----------------FADPALPRN 239

Query: 1031 TGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEV 1210
             G  FA+LL          R RFTSPHP +F D+++  M    N+C  +H+P QSGS  +
Sbjct: 240  RGA-FAELLRACGDIDGLERVRFTSPHPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRI 298

Query: 1211 LERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDMA 1390
            L  M+R Y  E YL +++++R  IP   +++D I GF  ETE+D A TL +VR   +  A
Sbjct: 299  LRAMRRSYRAERYLGIIERVRAAIPHAAITTDLIVGFPGETEEDFAATLDVVRRARFAAA 358

Query: 1391 YMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLV--- 1561
            + F YS R  T A    +  +P  V Q R   LI    + + +   + +G    VLV   
Sbjct: 359  FTFQYSKRPGTPA-AQLDGQLPKAVVQERYERLIALQEQISLEANRALVGQAVEVLVATG 417

Query: 1562 EGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTASLS 1741
            EG  K      + G+   G  V FT+          G  +   GD +  K+  ++   L 
Sbjct: 418  EG-RKDTVTARMSGRARDGRLVHFTA----------GQPRVRPGDVITTKVTEAAPHHL- 465

Query: 1742 GEPIARTSLGMYCKNHASDAHVVG 1813
               IA   +  + +  A DAH  G
Sbjct: 466  ---IADAGVLTHRRTRAGDAHTAG 486

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>P67085:Y2733_MYCTU UPF0004 protein Rv2733c/MT2803 - Mycobacterium tuberculosis|
          Length = 512

 Score =  213 bits (542), Expect = 3e-54
 Identities = 152/504 (30%), Positives = 233/504 (46%), Gaps = 3/504 (0%)
 Frame = +2

Query: 311  TYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWF 490
            TYGCQMNV+D E +  +++  GY     D   A+++  NTCA+R+NA+ +++  L++   
Sbjct: 31   TYGCQMNVHDSERLAGLLEAAGYRRAT-DGSEADVVVFNTCAVRENADNRLYGNLSHL-- 87

Query: 491  LKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQ 670
                        R ++    +IAV GC+A++ ++ +L     VDVV G      LP LL+
Sbjct: 88   ----------APRKRANPDMQIAVGGCLAQKDRDAVLRRAPWVDVVFGTHNIGSLPTLLE 137

Query: 671  EVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXXX 850
               + +     +    + +    P    +++  A+VS+  GCNN C+FCIVP        
Sbjct: 138  RARHNKVAQVEIAEALQQFPSSLPSS-RESAYAAWVSISVGCNNSCTFCIVPSLRGREVD 196

Query: 851  XXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKN 1030
                        L   GV EV LLGQNVN+Y  +                 F+     +N
Sbjct: 197  RSPADILAEVRSLVNDGVLEVTLLGQNVNAYGVS-----------------FADPALPRN 239

Query: 1031 TGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEV 1210
             G  FA+LL          R RFTSPHP +F D+++  M    N+C  +H+P QSGS  +
Sbjct: 240  RGA-FAELLRACGDIDGLERVRFTSPHPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRI 298

Query: 1211 LERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDMA 1390
            L  M+R Y  E YL +++++R  IP   +++D I GF  ETE+D A TL +VR   +  A
Sbjct: 299  LRAMRRSYRAERYLGIIERVRAAIPHAAITTDLIVGFPGETEEDFAATLDVVRRARFAAA 358

Query: 1391 YMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLV--- 1561
            + F YS R  T A    +  +P  V Q R   LI    + + +   + +G    VLV   
Sbjct: 359  FTFQYSKRPGTPA-AQLDGQLPKAVVQERYERLIALQEQISLEANRALVGQAVEVLVATG 417

Query: 1562 EGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTASLS 1741
            EG  K      + G+   G  V FT+          G  +   GD +  K+  ++   L 
Sbjct: 418  EG-RKDTVTARMSGRARDGRLVHFTA----------GQPRVRPGDVITTKVTEAAPHHL- 465

Query: 1742 GEPIARTSLGMYCKNHASDAHVVG 1813
               IA   +  + +  A DAH  G
Sbjct: 466  ---IADAGVLTHRRTRAGDAHTAG 486

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>Q49842:Y989_MYCLE UPF0004 protein ML0989 - Mycobacterium leprae|
          Length = 517

 Score =  199 bits (506), Expect = 4e-50
 Identities = 152/504 (30%), Positives = 231/504 (45%), Gaps = 6/504 (1%)
 Frame = +2

Query: 311  TYGCQMNVNDMEIVLSIMKKEGYNDIVPDPE--SAEIIFINTCAIRDNAEQKVWQRLNYF 484
            TYGCQMNV+D E +  +++  GY     + +   A+++  NTCA+R+NA+ +++  L++ 
Sbjct: 24   TYGCQMNVHDSERLAGLLEAAGYQRAADEADVGDADVVVFNTCAVRENADNRLYGNLSHL 83

Query: 485  WFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRL 664
                          R ++    +IAV GC+A++ K  +L     VD+V G      LP L
Sbjct: 84   ------------APRKRNNPDMQIAVGGCLAQKDKHTVLSKAPWVDIVFGTHNLGSLPTL 131

Query: 665  LQEVDYGQKG-INTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXX 841
            L    + +   +  + +L+   + +   R SD +  A+VS+  GCNN C+FCIVP     
Sbjct: 132  LDRARHNKVAQVEIVEALQHFPSSLPSARESDYA--AWVSISVGCNNSCTFCIVPSLRGK 189

Query: 842  XXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCK 1021
                           L   GV EV LLGQNVN+Y  +                 F+    
Sbjct: 190  EVDRSPADILAEVEALVADGVLEVTLLGQNVNAYGVS-----------------FADPAL 232

Query: 1022 VKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGS 1201
             +N G  FA+LL          R RFTSPHP +F  +++  M    N+C  +H+P QSGS
Sbjct: 233  ARNRG-SFAELLRSCGSIDGLERVRFTSPHPAEFTYDVIEAMAQTPNVCPSLHMPLQSGS 291

Query: 1202 TEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGY 1381
              VL  M+R Y  E YL ++ ++R  +P   +++D I GF  ETE+D A TL +VR V +
Sbjct: 292  DRVLRAMRRSYRVERYLGIIGQVRAAMPHAAITTDLIVGFPGETEEDFAATLDVVRQVRF 351

Query: 1382 DMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLV 1561
              A+ F YS R  T A       +P  V Q R   L+    +   +     IG    +LV
Sbjct: 352  TAAFTFQYSKRPGTPA-AELGGQLPKAVVQERYERLVELQEQICMEENRVLIGRIVELLV 410

Query: 1562 ---EGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTA 1732
               EG  K A      G+   G  V F        +  +   +P  GD + V +  ++  
Sbjct: 411  TTGEG-RKDARTARRTGRARDGRLVHFAL-----DTPWEAQVRP--GDIITVMVTEAAPH 462

Query: 1733 SLSGEPIARTSLGMYCKNHASDAH 1804
             L    IA   +  + +  A DAH
Sbjct: 463  HL----IADAGILTHRRTRAGDAH 482

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>P54462:YQEV_BACSU UPF0004 protein yqeV - Bacillus subtilis|
          Length = 451

 Score =  140 bits (352), Expect = 3e-32
 Identities = 118/479 (24%), Positives = 209/479 (43%), Gaps = 8/479 (1%)
 Frame = +2

Query: 311  TYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWF 490
            T GC++N  + E +  + K+ GY +     ++A++  INTC + +  ++K  Q       
Sbjct: 8    TLGCKVNHYETEAIWQLFKEAGY-ERRDFEQTADVYVINTCTVTNTGDKKSRQ------V 60

Query: 491  LKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQ 670
            ++R  + N  G          I V GC A+    +I+ +   VD+V G    +D  ++L 
Sbjct: 61   IRRAIRQNPDG---------VICVTGCYAQTSPAEIM-AIPGVDIVVGT---QDREKMLG 107

Query: 671  EVDYGQK------GINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFT 832
             +D  ++      G++ ++     Y ++     +D +  A + +  GCNN C+FCI+P+ 
Sbjct: 108  YIDQYREERQPINGVSNIMKAR-VYEELDVPAFTDRT-RASLKIQEGCNNFCTFCIIPWA 165

Query: 833  XXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSS 1012
                              L  AG KE++L G +   Y +  +                  
Sbjct: 166  RGLLRSRDPEEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMK------------------ 207

Query: 1013 RCKVKNTGLRFADLLDQLSLEYPEM-RFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPA 1189
                      FA LL +L      + R R +S       DE++ ++     I   +H+P 
Sbjct: 208  -------DYNFAKLLSELDTRVEGVKRIRISSIEASQITDEVIEVLDRSDKIVNHLHIPI 260

Query: 1190 QSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVR 1369
            QSGS  VL+RM+R YT E + + + K++  +P + ++SD I GF  ETE++  +T + ++
Sbjct: 261  QSGSNTVLKRMRRKYTMEFFADRLNKLKKALPGLAVTSDVIVGFPGETEEEFMETYNFIK 320

Query: 1370 AVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQ 1549
               +   ++F YS R  T A R  ED V  +VK  R+  LI    +  ++          
Sbjct: 321  EHKFSELHVFPYSKRTGTPAAR-MEDQVDENVKNERVHRLIALSDQLAKEYASQYENEVL 379

Query: 1550 VVLVEGPNKRAPETELF-GKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRS 1723
             ++ E   K   E  +F G TD   +V F               + ++G  V+VKIL++
Sbjct: 380  EIIPEEAFKETEEENMFVGYTDNYMKVVFK------------GTEDMIGKIVKVKILKA 426

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>Q9Z874:Y477_CHLPN UPF0004 protein CPn_0477/CP_0277/CPj0477/CpB0496 - Chlamydia|
            pneumoniae (Chlamydophila pneumoniae)
          Length = 421

 Score =  138 bits (347), Expect = 1e-31
 Identities = 122/493 (24%), Positives = 197/493 (39%), Gaps = 2/493 (0%)
 Frame = +2

Query: 275  TATVKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAE 454
            T    KG       GC++N  +++     +   GY +++     A++  INTCA+  +AE
Sbjct: 2    TVAEVKGTFKLVCLGCRVNQYEVQAYRDQLTILGYQEVLDSEIPADLCIINTCAVTASAE 61

Query: 455  QKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCG 634
                  +     L RQ  T              I V GC+ E  KE     D+   +V  
Sbjct: 62   SSGRHAVRQ---LCRQNPT------------AHIVVTGCLGESDKEFFASLDRQCTLVSN 106

Query: 635  PDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSF 814
                ++  RL++++           S + T+ +   +   +    AF+ V  GCN+ CS+
Sbjct: 107  ----KEKSRLIEKI----------FSYDTTFPEFK-IHSFEGKSRAFIKVQDGCNSFCSY 151

Query: 815  CIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQL 994
            CI+P+                   +   G +EV++ G NV  Y D               
Sbjct: 152  CIIPYLRGRSVSRPAEKILAEIAGVVDQGYREVVIAGINVGDYCDGER------------ 199

Query: 995  SEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKL 1174
                             A L++Q+       R R +S  P D  ++L   +    + C  
Sbjct: 200  ---------------SLASLIEQVDQIPGIERIRISSIDPDDITEDLHRAITSSRHTCPS 244

Query: 1175 IHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADT 1354
             HL  QSGS  +L+RM R Y+R  +L+ V+K R   P    ++D I GF  E++ D  DT
Sbjct: 245  SHLVLQSGSNSILKRMNRKYSRGDFLDCVEKFRASDPRYAFTTDVIVGFPGESDQDFEDT 304

Query: 1355 LSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQ 1534
            L I+  VG+   + F +S R +T A+  +++ +PN V   R   L    +   +K    +
Sbjct: 305  LRIIEDVGFIKVHSFPFSARRRTKAY-TFDNQIPNQVIYERKKYLAEVAKRVGQKEMMKR 363

Query: 1535 IGTTQVVLVEGPNKRAPETELFGKTDRGHRVSF--TSLPVTHTSEGDGARKPVVGDFVEV 1708
            +G T  VLVE         ++ G+   GH   F   S PV  T          +   V V
Sbjct: 364  LGETTEVLVE---------KVTGQVATGHSPYFEKVSFPVVGT--------VAINTLVSV 406

Query: 1709 KILRSSTASLSGE 1747
            ++ R     L GE
Sbjct: 407  RLDRVEEEGLIGE 419

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>Q9UXX9:Y1729_PYRAB UPF0004 protein PYRAB17290 - Pyrococcus abyssi|
          Length = 425

 Score =  137 bits (344), Expect = 2e-31
 Identities = 114/435 (26%), Positives = 190/435 (43%), Gaps = 7/435 (1%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            +IY E YGC  N  D EI+ +++   G+ +IV DP+  EI+ +N+CA++D  E+K+ +R+
Sbjct: 3    KIYIENYGCARNRADGEIMAALLHLAGH-EIVYDPDEGEIVVVNSCAVKDPTERKIARRI 61

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
                      K  +  G+       K+ V GC+        ++ D + + V G    + +
Sbjct: 62   ----------KELLDSGK-------KVIVTGCLPH------VNPDVIDERVSGILGVKSI 98

Query: 656  PRLLQEVDYGQKGINTLLSL----EETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIV 823
             R++Q V+Y  +G   L+S+    +     +   R+S  +V   V +  GC N C++C  
Sbjct: 99   DRIIQAVEYALRG-EKLISVPDWRKRNLDKLDFPRLSPRTVYFIVPIAEGCLNACTYCAT 157

Query: 824  PFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEG 1003
             F                       G KE+ L  ++   Y                   G
Sbjct: 158  RFARGVLKSYSPEKIVGWVKWAIKQGYKEIWLSAEDTGCY-------------------G 198

Query: 1004 FSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPK---DFPDELLYLMRDRHNICKL 1174
            F       + G   A LLD+++    E R R    +P     F DEL+   +D   I K 
Sbjct: 199  F-------DIGTNLAKLLDEITAIEGEFRVRVGMMNPNHVLKFLDELIEAYQD-EKIYKF 250

Query: 1175 IHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADT 1354
            +HLP QSG  ++L RM R YT E + E+V++ R   PD+ L +D I GF  E ++    +
Sbjct: 251  LHLPVQSGDNDILRRMGRNYTVEEFEEIVKEFRKKFPDLNLHTDIIVGFPGEDDEAFQRS 310

Query: 1355 LSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQ 1534
            + ++R +  D   +  YS R  T A +     +P  + + R   L     + + +I    
Sbjct: 311  VELIRRIRPDKVNVSRYSPRPGTIAAK--WKQLPGWIVKERSRLLHRIRLQISYEINQKY 368

Query: 1535 IGTTQVVLVEGPNKR 1579
            IG    VL+ G  K+
Sbjct: 369  IGKKVEVLIHGEGKK 383

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>O59545:Y1875_PYRHO UPF0004 protein PH1875 - Pyrococcus horikoshii|
          Length = 425

 Score =  130 bits (327), Expect = 2e-29
 Identities = 119/493 (24%), Positives = 206/493 (41%), Gaps = 7/493 (1%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            ++Y E YGC  N  D EI+ +++   G+ +IV  PE +EI+ +N+CA++D  E+K+ +R+
Sbjct: 3    KVYIENYGCARNRADGEIMAALLYLSGH-EIVESPEESEIVVVNSCAVKDPTERKIARRI 61

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
                             R       K+ V GC+     + I   D+ V  + G    + +
Sbjct: 62   -----------------RELLDNGKKVIVTGCLPHVNPDVI---DERVSAILG---VKSI 98

Query: 656  PRLLQEVDYGQKGINTLLSL----EETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIV 823
             R++Q V+Y  +G   L+S+    +     +   R+S  +V   + +  GC N C++C  
Sbjct: 99   DRIVQAVEYAMRG-EKLISVPDWKKRNLDKLDFPRLSPRNVYFILPIAEGCLNACTYCAT 157

Query: 824  PFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEG 1003
                                     G KE+ L  ++   Y                   G
Sbjct: 158  RLARGVLKSYSPEKIIGWVKWAIKQGYKEIWLSAEDTGCY-------------------G 198

Query: 1004 FSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPK---DFPDELLYLMRDRHNICKL 1174
            F       + G   A L+D+++    E R R    +P     F DEL+   +D   + K 
Sbjct: 199  F-------DIGTNLAKLIDEITAIEGEFRIRVGMMNPNHVLKFLDELIDAYKD-EKVYKF 250

Query: 1175 IHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADT 1354
            +HLP QSG  E+L +M R YT E + E+V+  R   P++ L +D I GF  E+E+    +
Sbjct: 251  LHLPVQSGDNEILRKMGRMYTVEEFEEIVKAFRREFPELNLHTDIIVGFPGESEEAFQRS 310

Query: 1355 LSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQ 1534
            + +++ +  D   +  YS R  T A +     +P  V + R   L     + + +I    
Sbjct: 311  VELIKRIRPDKVNVSRYSPRPGTIAAK--WKQLPGWVVKERSRLLHRIRLQISYEINRKY 368

Query: 1535 IGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKI 1714
            IG    VL+ G  K+               V   ++   H    +G +    G+F E ++
Sbjct: 369  IGKKVKVLIHGEGKKG-------------NVDAVTMNYKHIILPEGRK----GEFREARV 411

Query: 1715 LRSSTASLSGEPI 1753
              +++  L GE I
Sbjct: 412  KNAASTYLLGEII 424

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>Q58277:Y867_METJA UPF0004 protein MJ0867 - Methanococcus jannaschii|
          Length = 427

 Score =  130 bits (326), Expect = 3e-29
 Identities = 134/494 (27%), Positives = 208/494 (42%), Gaps = 8/494 (1%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            R+Y E YGC +N  D EI+ + +KK G+ ++V + E A+I  INTC +R   E ++  R+
Sbjct: 13   RVYVEGYGCVLNTADTEIIKNSLKKHGF-EVVNNLEEADIAIINTCVVRLETENRMIYRI 71

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMV--DVVCGPDAYR 649
            N    LK   K              ++ V GC+ + LK K+     +   +     +  +
Sbjct: 72   NE---LKNLGK--------------EVVVAGCLPKALKNKVKGFLHIYPREAHKAGEILK 114

Query: 650  DLPRLLQEVDYGQKGINTLLSLEETYAD---ITPVRISDNSVTAFVSVMRGCNNMCSFCI 820
            +       + Y ++ IN  L  +  Y     ITP+ I +           GC   CS+CI
Sbjct: 115  NYVEKHYRMPYIEEDINKTLYKKLDYLKPSLITPLPICE-----------GCIGNCSYCI 163

Query: 821  VPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSE 1000
            V                     L   G K +++  Q+   Y                   
Sbjct: 164  VKIARGGLISYPREKIVNKAKELINKGAKCLLITAQDTACY------------------- 204

Query: 1001 GFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKD---FPDELLYLMRDRHNICK 1171
            GF       + G   A+LL++L+    E   R    H K+     DEL+ + ++   + K
Sbjct: 205  GF-------DIGDNLANLLNELTQIKGEFIMRVGMMHAKNAELILDELIEVYQN-EKVGK 256

Query: 1172 LIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHAD 1351
             +HLP QSG  E+L+RMKRGYT + + ++V + R  I ++  ++D I GF  ETE+   +
Sbjct: 257  FLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTTDIIVGFPGETEEQFQN 316

Query: 1352 TLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDS 1531
            TL ++R +  D  +   YS R+ T A +  + D    +++RR   L    RE +      
Sbjct: 317  TLEVLRELKPDYIHGAKYSQRKGTEAAKMKQID--TKIRKRRSEILDKLRRELSYLNNKK 374

Query: 1532 QIGTTQVVLVEGPNKRAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVK 1711
             IG    VLV    K        G TD    V F         EG       VG+F +VK
Sbjct: 375  YIGKAMKVLVLDEGK--------GYTDNFKVVKF---------EGG-----EVGEFRKVK 412

Query: 1712 ILRSSTASLSGEPI 1753
            I  + T  L GE I
Sbjct: 413  ITDAKTFGLKGELI 426

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>Q9ZDB6:Y416_RICPR UPF0004 protein RP416 - Rickettsia prowazekii|
          Length = 421

 Score =  129 bits (325), Expect = 4e-29
 Identities = 111/437 (25%), Positives = 186/437 (42%), Gaps = 2/437 (0%)
 Frame = +2

Query: 311  TYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWF 490
            T+GC++N+ + EI+   ++  G +++            NTCA+  +AE++  Q +     
Sbjct: 16   TFGCRLNIYESEIIRKNLELSGLDNVA---------IFNTCAVTKSAEKQARQAIR---- 62

Query: 491  LKRQWKTNVAGGRSKSLRPP-KIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLL 667
                        ++K   P  KI V GC A+    K+  +   VD V G +  + L    
Sbjct: 63   ------------KAKKNNPDLKIIVTGCSAQA-NPKMYGNMSEVDKVIGNEE-KLLSHYY 108

Query: 668  QEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXX 847
            Q  D  +  +N ++S++ET   +  V   D    AF+ V  GC++ C+FCI+P+      
Sbjct: 109  QITDQ-KISVNDIMSVKETACHL--VSSFDGKSRAFIQVQNGCDHNCTFCIIPYVRGKSR 165

Query: 848  XXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVK 1027
                         L   G KEV++ G +V +Y          PG                
Sbjct: 166  SIPIGTIVAQVKHLVLKGFKEVVITGVDVTAYGSDL------PGSP-------------- 205

Query: 1028 NTGLRFADLLDQLSLEYPEM-RFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGST 1204
                 FA ++ ++    PE+ R R +S    +  DEL  L+     I    H+  QSG  
Sbjct: 206  ----TFAQMIKRVLKLVPELKRMRLSSIDIAEIDDELFELIAYSERIMPHFHISVQSGDD 261

Query: 1205 EVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYD 1384
             +L+RMKR + R + +E  QK+R + P+V   +D I+GF  ET +   +T  ++      
Sbjct: 262  MILKRMKRRHNRASVIEFCQKLRAIRPEVSFGADIIAGFPTETNEMFENTRKLILEAELQ 321

Query: 1385 MAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVE 1564
              ++F YS RE T A R     VP ++++ R   L         + +   IG    +L+E
Sbjct: 322  YLHVFPYSEREGTPAAR--MPQVPQNIRKERAKILRQDGFNQLNEFFKRHIGQKVELLIE 379

Query: 1565 GPNKRAPETELFGKTDR 1615
              N    E  +  K D+
Sbjct: 380  NNNIAHTENFIPVKLDK 396

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>Q9CKN9:Y1571_PASMU UPF0004 protein PM1571 - Pasteurella multocida|
          Length = 446

 Score =  129 bits (324), Expect = 5e-29
 Identities = 122/487 (25%), Positives = 212/487 (43%), Gaps = 13/487 (2%)
 Frame = +2

Query: 317  GCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLK 496
            GC  N+ D E +L+ ++ +GYN I+P  E+A+++ +NTC   D+A Q+  + +       
Sbjct: 14   GCPKNLVDSERILTELRSDGYN-IIPSYENADLVIVNTCGFIDSAVQESLEAIG------ 66

Query: 497  RQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEV 676
                              K+ V GC+  + +++I +    V  V GP +Y     ++Q+V
Sbjct: 67   -----------EALEENGKVIVTGCLGAK-EDRIREVHPKVLEVTGPHSYE---AVMQQV 111

Query: 677  -DYGQKGINTLLSLEETYADITP---VRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXX 844
              Y  K           Y ++ P   V+++     A++ +  GC++ C+FCI+P      
Sbjct: 112  HKYVPK------PAYNPYVNLVPKQGVKLTPKHY-AYLKISEGCDHRCTFCIIPSMRGDL 164

Query: 845  XXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKV 1024
                          L  AGVKE++++ Q+ ++Y        L+  K  Q    F +   +
Sbjct: 165  DSRSITQVLDEAKRLVEAGVKEILVVSQDTSAY-------ALDRSKEEQNKTVFWNGMPI 217

Query: 1025 KNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGST 1204
            KN  +   + L +L +    +R  +  P+P    D+L+ LM +   I   + +P Q  S 
Sbjct: 218  KNNLISLCEQLGKLGV---WVRLHYVYPYP--HVDQLIPLMAE-GKILPYLDIPLQHASP 271

Query: 1205 EVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYD 1384
            ++L+ MKR  + E  LE ++K R + PD+ L S FI GF  E+E+D    L  ++    D
Sbjct: 272  KILKAMKRPGSIERTLERIKKWREICPDLTLRSTFIVGFPGESEEDFQLLLDFLKEALLD 331

Query: 1385 MAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVE 1564
                F +S  E   A     D VP +VK+ R    +   +E +      ++G    VLV+
Sbjct: 332  RVGCFKFSPVEGAIA-TEMPDQVPEEVKEARFHRFMQLQQEISAARLQQKVGKVFTVLVD 390

Query: 1565 GPNKR---------APETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKIL 1717
              ++          APE +     D  +RV+  +                 G F+EVKI 
Sbjct: 391  EVDEEGIIARSIADAPEIDGVVYIDNPNRVAVKA-----------------GQFIEVKIT 433

Query: 1718 RSSTASL 1738
            R+    L
Sbjct: 434  RADAYDL 440

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>O67016:Y849_AQUAE UPF0004 protein aq_849 - Aquifex aeolicus|
          Length = 432

 Score =  129 bits (323), Expect = 7e-29
 Identities = 118/476 (24%), Positives = 201/476 (42%)
 Frame = +2

Query: 317  GCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLK 496
            GC  N+ D EI+L  +K  G  ++ P+PE A++I +NTC   + A+ +  + +  F    
Sbjct: 9    GCAKNLVDSEILLGKLKGAGV-ELTPNPEEADVIIVNTCGFIEPAKLESIETILEF---- 63

Query: 497  RQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEV 676
                     G+       ++ V+GC+ ER KE++      V    G +++ ++   L   
Sbjct: 64   ------AESGK-------EVIVMGCLVERYKEELEKEIPEVKAYFGTESWNEILNYLGLK 110

Query: 677  DYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXXXXX 856
            +  +K I  +LS   +YA              ++ +  GCN +CSFC +P          
Sbjct: 111  E--KKEIKRILSTPRSYA--------------YLKIAEGCNRLCSFCAIPKIRGRHRSRK 154

Query: 857  XXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNTG 1036
                      L   GVKE+ ++ Q+   Y      E     K  +L EG       K  G
Sbjct: 155  IEEIVDEAKFLADQGVKEICVVSQDTTYYGKDLYKEY----KLVELLEGLE-----KVEG 205

Query: 1037 LRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLE 1216
            +++  LL                 +P +  ++L+  + +   +     +P Q  S  VL+
Sbjct: 206  IKWIRLLYL---------------YPTEVHEDLIDYVANSEKVLPYFDVPLQHVSDRVLK 250

Query: 1217 RMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDMAYM 1396
             M+RGY  +    L++ IR  I +    + FI GF  E+E+D  +    V    +    +
Sbjct: 251  DMRRGYDGKFVRNLIENIRKKIENAVFRTTFIVGFPTESEEDFKELKKFVEEGHFHWLGV 310

Query: 1397 FAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVEGPNK 1576
            F YS  E THA+    D +P +VK+ R  EL+   R  TRK  +  +G    VL++G   
Sbjct: 311  FTYSPEEGTHAY-PLGDPIPREVKEERREELMAIQRGITRKKNEEFLGKEIEVLIDG--- 366

Query: 1577 RAPETELFGKTDRGHRVSFTSLPVTHTSEGDGARKPVVGDFVEVKILRSSTASLSG 1744
                 E F    +G R  F +  V      + +R    GD ++VK+ + +   L+G
Sbjct: 367  ---YEEEFSFVPKG-RAYFQAPEVDGVVYVESSRDLKSGDILKVKVTQVADYDLAG 418

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>O66772:Y474_AQUAE UPF0004 protein aq_474 - Aquifex aeolicus|
          Length = 410

 Score =  125 bits (315), Expect = 6e-28
 Identities = 110/433 (25%), Positives = 186/433 (42%), Gaps = 2/433 (0%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            ++  ET GC+MN  D +++ +   ++GY ++V   + A++  INTC +    ++   Q +
Sbjct: 2    KVAFETLGCRMNQFDTDLLKNKFIQKGY-EVVSFEDMADVYVINTCTVTVGGDRSSRQAI 60

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVL-GCMAERLKEKILDSDKMVDVVCGPDAYRD 652
                             ++K   P  I V  GC A+ +  + L   K VD+V G     +
Sbjct: 61   Y----------------QAKRRNPKAIVVATGCYAQ-VNPQELAKLKEVDLVVGNTHKSE 103

Query: 653  LPRLLQE-VDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPF 829
            L ++L+E ++  +K +       E         +    V  F+ V  GCN  C+FC++P+
Sbjct: 104  LLKILEEYLERREKKVVVGEIFREKEVRNFDTVLYFEGVRPFLKVQEGCNKFCTFCVIPY 163

Query: 830  TXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFS 1009
                               L   G KEV+L G  ++ Y              W   +G++
Sbjct: 164  ARGKVRSVDLEKIVHQVKLLAQKGFKEVVLTGTQLSQY-------------GW--DKGYN 208

Query: 1010 SRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPA 1189
                       +  L + + +E  E+  R +S H K+   ELL L+     I    HL  
Sbjct: 209  ----------LYTLLTELIKIEGIEL-IRLSSMHIKEMDKELLKLIVSEEKIAPHFHLSL 257

Query: 1190 QSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVR 1369
            QSGS  +LE M RGYTRE Y E+V  I    P   + +D I GF  E+E+D  +T   ++
Sbjct: 258  QSGSNRILELMDRGYTREEYEEVVNFIVENRPISSIGTDVIVGFPTESEEDFQETYEFLK 317

Query: 1370 AVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQ 1549
             +     ++F YS R  T A +  +  +P  +K+ R+  L    ++  ++ Y+   G   
Sbjct: 318  RIPISYMHIFPYSDRPFTKASK-LKPKLPERIKKERVRILKELDQKKRQEFYEKNKGKEL 376

Query: 1550 VVLVEGPNKRAPE 1588
              LV   N+   E
Sbjct: 377  RALVIEENRLLTE 389

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>Q9WZT7:Y830_THEMA UPF0004 protein TM_0830 - Thermotoga maritima|
          Length = 434

 Score =  124 bits (311), Expect = 2e-27
 Identities = 108/426 (25%), Positives = 188/426 (44%), Gaps = 7/426 (1%)
 Frame = +2

Query: 308  ETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFW 487
            ET+GC++N  + E +   ++K GY  ++PD  +A  I +N+CA+    E+KV        
Sbjct: 7    ETFGCKVNQYESEYMAEQLEKAGYV-VLPDGNAAYYI-VNSCAVTKEVEKKV-------- 56

Query: 488  FLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLL 667
              KR  K+     R+K+    KI + GC A+   ++    +  VD+V G D  + +   +
Sbjct: 57   --KRLIKS--IRNRNKNA---KIILTGCFAQLSPDEA--KNLPVDMVLGIDEKKHIVDHI 107

Query: 668  ------QEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPF 829
                  Q+V   + G      ++ ++ D T          +++ V  GC+N C++C +  
Sbjct: 108  NSLNGKQQVVVSEPGRPVYEKVKGSFEDRT---------RSYIKVEDGCDNTCTYCAIRL 158

Query: 830  TXXXXXXXXXXXXXXXXXX-LWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGF 1006
                                +   G KE+++ G N+  Y                     
Sbjct: 159  ARGTRIRSKPLEIFKEEFAEMVMKGYKEIVITGVNLGKYG-------------------- 198

Query: 1007 SSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLP 1186
                  K+ G   A+LL  +     + R R +S + +D  DE++   +    +C  +H+ 
Sbjct: 199  ------KDMGSSLAELLKVIEKVPGDYRVRLSSINVEDVNDEIVKAFKRNPRLCPHLHIS 252

Query: 1187 AQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIV 1366
             QSGS +VL+RM R Y    ++ +V K+R++ PD  +++D I GF  ET+ D   TL +V
Sbjct: 253  VQSGSDDVLKRMGRKYKISDFMRVVDKLRSIDPDFSITTDIIVGFPGETDADFQRTLELV 312

Query: 1367 RAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTT 1546
              V +   ++F +S R  T A R  E  VP   K+ RL  L    ++ + +     IG  
Sbjct: 313  EKVEFSRVHIFRFSPRPGTPASR-MEGGVPESKKKERLDVLKEKAKDVSIRYRKRIIGKE 371

Query: 1547 QVVLVE 1564
            + VL E
Sbjct: 372  RKVLAE 377

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>Q49573:Y16R_MYCIO UPF0004 protein in 16S RNA 5'region - Mycoplasma iowae|
          Length = 438

 Score =  122 bits (307), Expect = 5e-27
 Identities = 110/422 (26%), Positives = 191/422 (45%), Gaps = 4/422 (0%)
 Frame = +2

Query: 311  TYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWF 490
            T GC++N+ +   + + +   G  + VP    A++  INTC + + A+ K   RL    +
Sbjct: 14   TLGCKVNLFESNSIKNDLIMNGLVE-VPFDSKADVYIINTCTVTNKADAK--SRL----Y 66

Query: 491  LKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQ 670
            +KR    N         +   I V GCM++  K+ ++D  K + +  G      +  L+ 
Sbjct: 67   IKRAHVQN---------KDAIIIVAGCMSQVNKD-LMDKLK-ISIQIGNKYKNSVFDLIN 115

Query: 671  EVDYGQKGINTLLSL--EETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXX 844
            E    ++ I  + ++  E+ +   T   I   +  AF+ +  GCN MCS+CI+PF+    
Sbjct: 116  EYLKKRERIYRVENILAEKKFEQTTQDFIFLENTRAFIKIQDGCNFMCSYCIIPFSRGRQ 175

Query: 845  XXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKV 1024
                          L     KE++L G N   Y D +                       
Sbjct: 176  RSQKMESILEKIKTLVSKXFKEIVLTGVNTAGYLDENN---------------------- 213

Query: 1025 KNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMR-DRHNICKLIHLPAQSGS 1201
             NT   F DLL+ ++    + R R +S  P    DE++ L+  ++   C+  H+  QSGS
Sbjct: 214  -NT---FFDLLNNINKLDGDFRVRISSLEPFQINDEIIDLVTSNKKRFCQHWHICLQSGS 269

Query: 1202 TEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVG- 1378
             +VL++M R YT + + +L+QKI N  P    ++D+I GF  ET++D   ++  +  +  
Sbjct: 270  DDVLKKMNRKYTTDEFYKLMQKILNKSPLTNFTTDYIVGFPTETDEDQKKSIDFLNKIKL 329

Query: 1379 YDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVL 1558
            YDM ++F YS R  T +  ++  D+ +  K+ R+ E+        ++     IG T  VL
Sbjct: 330  YDM-HIFPYSKRNNTRS--SHYKDINDSTKKDRVKEITKLNYLNKKENLKKYIGKTCEVL 386

Query: 1559 VE 1564
             E
Sbjct: 387  FE 388

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>P0AEI4:YLIG_ECOLI UPF0004 protein yliG - Escherichia coli|
          Length = 441

 Score =  122 bits (305), Expect = 8e-27
 Identities = 104/419 (24%), Positives = 192/419 (45%), Gaps = 3/419 (0%)
 Frame = +2

Query: 317  GCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLK 496
            GC  N+ D E +L+ ++ EGY D+VP  + A+++ +NTC   D+A Q+  + +       
Sbjct: 16   GCPKNLVDSERILTELRTEGY-DVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE----- 69

Query: 497  RQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEV 676
                 N  G         K+ V GC+  + +++I +    V  + GP +Y    ++L+ V
Sbjct: 70   ---ALNENG---------KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYE---QVLEHV 113

Query: 677  DY--GQKGINTLLSL-EETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXX 847
             +   +   N  LSL  E    +TP         A++ +  GCN+ C+FCI+P       
Sbjct: 114  HHYVPKPKHNPFLSLVPEQGVKLTPRHY------AYLKISEGCNHRCTFCIIPSMRGDLV 167

Query: 848  XXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVK 1027
                         L  AGVKE++++ Q+ ++Y           G + +   GF +   VK
Sbjct: 168  SRPIGEVLSEAKRLVDAGVKEILVISQDTSAY-----------GVDVKHRTGFHNGEPVK 216

Query: 1028 NTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTE 1207
             + +   + L +L + +  + + +  PH     D+++ LM +   I   + +P Q  S  
Sbjct: 217  TSMVSLCEQLSKLGI-WTRLHYVYPYPHV----DDVIPLMAEG-KILPYLDIPLQHASPR 270

Query: 1208 VLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDM 1387
            +L+ MKR  + +  L  +++ R + P++ L S FI GF  ETE+D    L  ++    D 
Sbjct: 271  ILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDR 330

Query: 1388 AYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVE 1564
               F YS  E   A+    D VP +VK+ R    +   ++ + +    ++G   +V+++
Sbjct: 331  VGCFKYSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388

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>P0AEI5:YLIG_ECO57 UPF0004 protein yliG - Escherichia coli O157:H7|
          Length = 441

 Score =  122 bits (305), Expect = 8e-27
 Identities = 104/419 (24%), Positives = 192/419 (45%), Gaps = 3/419 (0%)
 Frame = +2

Query: 317  GCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLK 496
            GC  N+ D E +L+ ++ EGY D+VP  + A+++ +NTC   D+A Q+  + +       
Sbjct: 16   GCPKNLVDSERILTELRTEGY-DVVPSYDDADMVIVNTCGFIDSAVQESLEAIGE----- 69

Query: 497  RQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEV 676
                 N  G         K+ V GC+  + +++I +    V  + GP +Y    ++L+ V
Sbjct: 70   ---ALNENG---------KVIVTGCLGAK-EDQIREVHPKVLEITGPHSYE---QVLEHV 113

Query: 677  DY--GQKGINTLLSL-EETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXX 847
             +   +   N  LSL  E    +TP         A++ +  GCN+ C+FCI+P       
Sbjct: 114  HHYVPKPKHNPFLSLVPEQGVKLTPRHY------AYLKISEGCNHRCTFCIIPSMRGDLV 167

Query: 848  XXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVK 1027
                         L  AGVKE++++ Q+ ++Y           G + +   GF +   VK
Sbjct: 168  SRPIGEVLSEAKRLVDAGVKEILVISQDTSAY-----------GVDVKHRTGFHNGEPVK 216

Query: 1028 NTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTE 1207
             + +   + L +L + +  + + +  PH     D+++ LM +   I   + +P Q  S  
Sbjct: 217  TSMVSLCEQLSKLGI-WTRLHYVYPYPHV----DDVIPLMAEG-KILPYLDIPLQHASPR 270

Query: 1208 VLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDM 1387
            +L+ MKR  + +  L  +++ R + P++ L S FI GF  ETE+D    L  ++    D 
Sbjct: 271  ILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDR 330

Query: 1388 AYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVE 1564
               F YS  E   A+    D VP +VK+ R    +   ++ + +    ++G   +V+++
Sbjct: 331  VGCFKYSPVEGADANA-LPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIID 388

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>O26914:Y826_METTH UPF0004 protein MTH_826 - Methanobacterium thermoautotrophicum|
          Length = 424

 Score =  120 bits (301), Expect = 2e-26
 Identities = 101/427 (23%), Positives = 177/427 (41%), Gaps = 5/427 (1%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            R+Y ET+GC  N  D EI+  ++++EG   ++   + A++I INTC ++   E KV  R 
Sbjct: 5    RVYIETFGCTFNQADSEIMAGVLREEG--AVLTGIDDADVIIINTCYVKHPTEHKVINR- 61

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAY--- 646
                 +K+  +T    G         + V GCM E      +D  K+ + + G  ++   
Sbjct: 62   -----IKKIQETYPEKG---------LVVAGCMVE------IDPSKL-EAISGDASWLGP 100

Query: 647  RDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVP 826
              L R  Q V     G+   ++   +   +   R+  N +   + +  GCN  CS+C   
Sbjct: 101  HQLRRAPQAVRAASNGLVERITGFTSDVKVKVPRVRSNPLIHIIPICEGCNGSCSYCCTR 160

Query: 827  FTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGF 1006
            F                      +G +E+ L  Q+  +Y                     
Sbjct: 161  FARGRIQSYPSDLIISEAREAVASGCREIQLTAQDTAAYG-------------------- 200

Query: 1007 SSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMR--DRHNICKLIH 1180
                   +TG + +D++  +S      R R    HP     +L  L+       +   +H
Sbjct: 201  ------VDTGEKLSDIIKGISGIPGNFRIRVGMMHPASVLRDLDGLVEAFKSEKVYSFLH 254

Query: 1181 LPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLS 1360
            LP QSGS  VL  M+RG+T + +  +V++ R+ IPD+ +++D I G+  E  +D  DT S
Sbjct: 255  LPVQSGSDSVLADMERGHTVDEFRMIVERFRSEIPDISIATDIIVGYPTEEREDFMDTCS 314

Query: 1361 IVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIG 1540
            ++  V     ++  Y  R +  A  +  D++     +RR   L       T +     +G
Sbjct: 315  LLEEVKPSFIHLSKY--RHRPRARSSSLDEIDFRELRRRSRALEELKMRITEEENRRLVG 372

Query: 1541 TTQVVLV 1561
            + Q +LV
Sbjct: 373  SFQEILV 379

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>Q55803:Y082_SYNY3 UPF0004 protein slr0082 - Synechocystis sp. (strain PCC 6803)|
          Length = 443

 Score =  112 bits (281), Expect = 5e-24
 Identities = 102/436 (23%), Positives = 186/436 (42%), Gaps = 3/436 (0%)
 Frame = +2

Query: 317  GCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLK 496
            GC+ N  D E +L ++ + GY  +  + E A+ + +NTC+   +A Q+            
Sbjct: 13   GCEKNRIDSEHMLGLLVEAGYQ-VDANEELADYVIVNTCSFIQDARQE------------ 59

Query: 497  RQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEV 676
               +T V    +K     KI + GC+A+  +E++L+       V G   Y+++  +++  
Sbjct: 60   -SVRTLVELAEAKK----KIVISGCLAQHFQEQLLEEIPEAVAVVGTGDYQNIVDIIRRT 114

Query: 677  DYGQKGINTLLSLEETYADITPVRI-SDNSVTAFVSVMRGCNNMCSFCIVPFTXXXXXXX 853
            + GQ+ +  +       AD    R  + N   A++ V  GC+  C+FCI+P         
Sbjct: 115  EQGQR-VKAISPNPSFIADENLPRYRTTNEAIAYLRVAEGCDYRCAFCIIPQLRGKQRSR 173

Query: 854  XXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNT 1033
                       L   GVKE++L+ Q   +Y      E                       
Sbjct: 174  PIESIVAEAEQLASQGVKELILISQITTNYGLDLYGEP---------------------- 211

Query: 1034 GLRFADLLDQL-SLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEV 1210
              + A+LL  L  ++ P +R  +   +P     +++  +RD  N+   + LP Q    ++
Sbjct: 212  --KLAELLQALGKVDIPWIRIHYA--YPTGLTPKVIEAIRDTPNVLPYLDLPLQHSHPDI 267

Query: 1211 LERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDMA 1390
            L  M R +  +   +++ +++  +PD  L + FI GF  ETE+     L  V+   +D  
Sbjct: 268  LRAMNRPWQGQVNDDIITRLKTALPDAVLRTTFIVGFPGETEEHFGHLLDFVQRHQFDHV 327

Query: 1391 YMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVEGP 1570
             +F +S  E T A  +  + VP +V   R   L+   +  + +   + +G T  VL+E  
Sbjct: 328  GVFTFSPEEGTAAF-DLPNAVPEEVMGDRRDRLMALQQPISAQKNAACLGQTLDVLIEQE 386

Query: 1571 NKRAPET-ELFGKTDR 1615
            N   P T E  G++ R
Sbjct: 387  N---PSTGEFIGRSTR 399

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>O29021:Y1247_ARCFU UPF0004 protein AF_1247 - Archaeoglobus fulgidus|
          Length = 405

 Score =  111 bits (278), Expect = 1e-23
 Identities = 114/443 (25%), Positives = 183/443 (41%), Gaps = 5/443 (1%)
 Frame = +2

Query: 401  ESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAE 580
            E AE++ IN+C + D  E+K+ +R+     LKR+ K              K+ + GC+  
Sbjct: 15   EDAEVVIINSCGVIDFTERKIIRRM---LDLKREGK--------------KVVLAGCLTR 57

Query: 581  RLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDN 760
              KE +     + D    PD    +   +     G+K       +++        R+ +N
Sbjct: 58   ISKEAL----SVADSALSPDNLDMVVDAVYSALNGRKLFTERRFIDKAEFSHLKCRLREN 113

Query: 761  SVTAFVSVMRGCNNMCSFCIVPFTXXXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNS 940
            ++ A VS+  GC   CSFC   F                      AG +E+ L  Q+  +
Sbjct: 114  AI-AIVSISEGCLGKCSFCATKFARGRLRSFSMDAIVREAERAVRAGYREIQLTSQDTGA 172

Query: 941  YNDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKD 1120
            Y        ++ G+                      +LL ++S    E R R    +P+ 
Sbjct: 173  YG-------MDKGR------------------AMLPELLRKISEIEGEFRVRVGMMNPQH 207

Query: 1121 ---FPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDV 1291
                 DEL+        I K +H+P QSG   +LE MKR +T E Y+E+V+  RN   DV
Sbjct: 208  AVRMLDELINAYSSE-KIYKFLHIPVQSGDNRILEDMKRNHTVEDYVEVVEAFRNSFDDV 266

Query: 1292 GLSSDFISGFCEETEDDHADTLSIVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQ 1471
             +S+D I GF  ETE+    +  +++    D+  +  YS R+ T A R    D+P  +K+
Sbjct: 267  LISTDIIVGFPTETEEAFWKSYELIKETRPDIVNITRYSARKGTPAAR--LRDIPGWIKK 324

Query: 1472 RRLAELINTFRETTRKIYDSQIGTTQVVLV--EGPNKRAPETELFGKTDRGHRVSFTSLP 1645
             R  +L +  R+   +     +G    VLV  EG N R          +     S+ ++ 
Sbjct: 325  ERSRKLTDLMRKIGLENNKRFVGKKLRVLVTKEGKNGR----------NLARMNSYRAV- 373

Query: 1646 VTHTSEGDGARKPVVGDFVEVKI 1714
                +EG       VG+FVEVKI
Sbjct: 374  ---VTEG------AVGEFVEVKI 387

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>O83293:Y269_TREPA UPF0004 protein TP_0269 - Treponema pallidum|
          Length = 482

 Score = 90.9 bits (224), Expect = 2e-17
 Identities = 115/478 (24%), Positives = 178/478 (37%), Gaps = 59/478 (12%)
 Frame = +2

Query: 308  ETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIF--INTCAIRDNAEQKVWQRLNY 481
            ET GC++N  + E + ++  +EG+     +  +A ++   INTC +   AEQK  + +  
Sbjct: 7    ETLGCRLNHVESESLAALFLQEGFAVCRGNTSTAPVVLCVINTCTVTSKAEQKARRLVR- 65

Query: 482  FWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGP--DAYRDL 655
               L R + T +A             V GC A+     +   D  V    G   DA   L
Sbjct: 66   --LLLRTYPTAIA------------LVTGCYAQLEPASLEAMDDRVLAFPGKQKDALSLL 111

Query: 656  PRLLQE---------VDYGQKGINTLL--------SLEET--------------YADITP 742
            P  L+          +D    G+  LL        SLE T                 +T 
Sbjct: 112  PSCLRALLVQRGPAPIDQYVCGMRALLASLKKKIISLELTSEFPSQTHMPTRNALPQLTG 171

Query: 743  V----RISDNSVT--------------------AFVSVMRGCNNMCSFCIVPFTXXXXXX 850
            V    R+S +S +                    A + V  GCN+ C+FC + F       
Sbjct: 172  VPHAPRVSVSSFSEPTAVPRFALYAPRFLFHSRASIKVQDGCNSGCAFCRIRFARGRAVS 231

Query: 851  XXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKN 1030
                        L   G+ EV+L G N++ Y   S                         
Sbjct: 232  LETHEVIGRVQALEARGMSEVVLTGVNLSQYRSGS------------------------- 266

Query: 1031 TGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEV 1210
              + FA LL+ +  E   +  R +S +P+      L  +     +    HL  QSGS  V
Sbjct: 267  --IDFAGLLELIVQETHTIHIRISSLYPESVTSAFLRAIAHTR-VSPHFHLSVQSGSDRV 323

Query: 1211 LERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDMA 1390
            L RM+R YTR    + V  +R+V  +  L  D I GF  ETE+D ADT  + + + +   
Sbjct: 324  LRRMRRAYTRADIYQAVSDLRSVREEPFLGCDIIVGFPGETEEDFADTQRMCKTLRFAGI 383

Query: 1391 YMFAYSMREKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVE 1564
            ++F +S R  T A    +  VP  +   R+A +     +  R   +   G     +VE
Sbjct: 384  HVFPFSARPGTEAFA-MDAKVPQRIAGERVAAMQQLAEKNYRAYLEYWNGRELCAVVE 440

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>Q9ZMF0:Y285_HELPJ UPF0004 protein jhp_0270 - Helicobacter pylori J99 (Campylobacter|
            pylori J99)
          Length = 418

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 89/393 (22%), Positives = 155/393 (39%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            ++Y +T+GC+ N+ D +++   +K         + + A+II IN+C + +  +  V    
Sbjct: 3    KVYFKTFGCRTNLFDTQVMGENLKDFS---ATLEEQEADIIIINSCTVTNGTDSAV---- 55

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
                   R +       R  +    ++   GC  +   +++ +   ++  V G D    +
Sbjct: 56   -------RSY------ARKMARLDKEVLFTGCGVKTQGKELFEKG-LLKGVFGHDNKEKI 101

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
              LLQE    +K      +LE  + D T V        AF+ +  GC+  C++CI+P   
Sbjct: 102  NALLQE----KKRFFIDDNLENKHLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVR 157

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                             L   GV+EV+L G NV SY                        
Sbjct: 158  GRARSFEERKILEQVGLLCSKGVQEVVLTGTNVGSYG----------------------- 194

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
               K+ G   A L+ +LS      R R  S  P    DE L L+ +   + K +H+  Q 
Sbjct: 195  ---KDRGSNIARLIKKLSQITGLKRIRIGSLEPNQINDEFLELLEEDF-LEKHLHIALQH 250

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
                +LERM R    ++  EL++ I +   +  + +DFI G   E+E         + ++
Sbjct: 251  SHDFMLERMNRRNRTKSDRELLEIIAS--KNFAIGTDFIVGHPGESESVFEKAFKNLESL 308

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQR 1474
                 + F YS R+ T +    +     D K+R
Sbjct: 309  PLTHIHPFIYSKRKDTPSSLMRDSVSLEDSKKR 341

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>P56130:Y285_HELPY UPF0004 protein HP_0285 - Helicobacter pylori (Campylobacter pylori)|
          Length = 418

 Score = 82.8 bits (203), Expect = 6e-15
 Identities = 89/393 (22%), Positives = 158/393 (40%)
 Frame = +2

Query: 296  RIYHETYGCQMNVNDMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRL 475
            ++Y +T+GC+ N+ D +++   +K   ++  + + E A+II IN+C + + A+  V    
Sbjct: 3    KVYFKTFGCRTNLFDTQVMSENLKD--FSTTLEEQE-ADIIIINSCTVTNGADSAVRS-- 57

Query: 476  NYFWFLKRQWKTNVAGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDL 655
                + K+  + +            ++   GC  +   +++ +   +  V  G D    +
Sbjct: 58   ----YAKKMARLD-----------KEVLFTGCGVKTQGKELFEKGFLKGVF-GHDNKEKI 101

Query: 656  PRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTX 835
              LLQE    +K      +LE  + D T V        AF+ +  GC+  C++CI+P   
Sbjct: 102  NALLQE----KKRFFIDDNLENKHLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVR 157

Query: 836  XXXXXXXXXXXXXXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSR 1015
                             L   GV+EV+L G NV SY                        
Sbjct: 158  GRARSFEERKILEQVGLLCSKGVQEVVLTGTNVGSYG----------------------- 194

Query: 1016 CKVKNTGLRFADLLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQS 1195
               K+ G   A L+ +LS      R R  S  P    DE L L+ +   + K +H+  Q 
Sbjct: 195  ---KDRGSNIARLIKKLSQIAGLKRIRIGSLEPNQINDEFLELLEEDF-LEKHLHIALQH 250

Query: 1196 GSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAV 1375
                +LERM R    ++  EL++ I +   +  + +DFI G   E+          + ++
Sbjct: 251  SHDLMLERMNRRNRTKSDRELLETIAS--KNFAIGTDFIVGHPGESGSVFEKAFKNLESL 308

Query: 1376 GYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQR 1474
                 + F YS R+ T +    +     D K+R
Sbjct: 309  PLTHIHPFIYSKRKDTPSSLMTDSVSLEDSKKR 341

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>Q58882:Y1487_METJA Uncharacterized protein MJ1487 - Methanococcus jannaschii|
          Length = 426

 Score = 42.0 bits (97), Expect = 0.011
 Identities = 30/88 (34%), Positives = 43/88 (48%)
 Frame = +2

Query: 1169 KLIHLPAQSGSTEVLERMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHA 1348
            K + + AQSGS +VLE   RG+T E     V+  R     +G+  DFI G   ETE+D  
Sbjct: 292  KNLVIGAQSGSEKVLELCHRGHTVEDVYNAVRVARKA--GLGVDVDFIFGLPGETEEDVE 349

Query: 1349 DTLSIVRAVGYDMAYMFAYSMREKTHAH 1432
             T+ +++ +           M  K HAH
Sbjct: 350  KTIKVMKDL---------IKMGAKIHAH 368

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>Q58275:Y865_METJA UPF0004 protein MJ0865 - Methanococcus jannaschii|
          Length = 449

 Score = 40.4 bits (93), Expect = 0.032
 Identities = 58/285 (20%), Positives = 117/285 (41%), Gaps = 13/285 (4%)
 Frame = +2

Query: 551  KIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYG---QKGINTLLSLEE 721
            K+ V GC++     +I+ ++  VD V   +     P++++    G   ++G   +++  +
Sbjct: 86   KVYVAGCVSTY--PEIILNELNVDGVIVGEGEITTPKIIEGDKEGLAYKEGDEIVINYPK 143

Query: 722  TYADIT------PVRISDNSV---TAFVSVMRGCNNMCSFCIVP-FTXXXXXXXXXXXXX 871
               D+       P  I   S+     ++   RGC   C+FC VP F              
Sbjct: 144  EKPDLNHPLPLIPKDIEQQSIRGANVYIETHRGCLGNCTFCQVPKFFGKTIRSRDVEDVV 203

Query: 872  XXXXXLWYAGVKEVMLLGQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFAD 1051
                    AG K + + G   + Y   +  + +   K ++L E             + ++
Sbjct: 204  EEVKAFKRAGAKRIAISGGTGSLY---AFKKSINRDKFFELLE-------------KVSE 247

Query: 1052 LLDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRG 1231
            ++ + +L  P+MR         D+ DE + L   ++     +    +SGS ++L+ MK+G
Sbjct: 248  VIGKNNLSVPDMRV--------DYVDEEI-LEAIKNYTIGWVFYGIESGSDKILKDMKKG 298

Query: 1232 YTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIV 1366
              RE  L+ ++  ++    V ++  FI  +  ETE D+  T   +
Sbjct: 299  TNREKNLDAIKLAKDC--GVKVAGSFIVAYPTETEMDYLLTKDFI 341

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>Q5UP06:YR756_MIMIV Uncharacterized protein R756 - Mimivirus|
          Length = 298

 Score = 35.4 bits (80), Expect = 1.0
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 653 LPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFC 817
           + RL+ ++D     +NT L  E  Y     VR +D  ++A++S   GC   C FC
Sbjct: 1   MKRLVSKIDKSVNFVNTTLGTECRY-----VRRNDKYISAYLSSHNGCKMACKFC 50

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>P59342:BARA_SHIFL Signal transduction histidine-protein kinase barA - Shigella flexneri|
          Length = 918

 Score = 35.0 bits (79), Expect = 1.3
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
 Frame = +2

Query: 923  GQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFT 1102
            G  ++S   T EV E+    N  L    + R     T L   D+L  L    PE+R +  
Sbjct: 787  GSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLA-RDMLQMLLDFLPEVRNKVE 845

Query: 1103 SPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTRE-----AYLELVQK 1267
                 + P+ L+ L+   H  C    +P      +++E+  R  T+E       LEL+ +
Sbjct: 846  EQLAGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDE 905

Query: 1268 IRNV 1279
            + NV
Sbjct: 906  MDNV 909

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>P0AEC5:BARA_ECOLI Signal transduction histidine-protein kinase barA - Escherichia coli|
          Length = 918

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
 Frame = +2

Query: 923  GQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFT 1102
            G  ++S   T EV E+    N  L    + R     T L   D+L  L    PE+R +  
Sbjct: 787  GSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLA-RDMLQMLLDFLPEVRNKVE 845

Query: 1103 SPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTRE-----AYLELVQK 1267
                 + P+ L+ L+   H  C    +P      +++E+  R  T+E       LEL+ +
Sbjct: 846  EQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDE 905

Query: 1268 IRNV 1279
            + NV
Sbjct: 906  MDNV 909

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>P0AEC6:BARA_ECOL6 Signal transduction histidine-protein kinase barA - Escherichia coli|
            O6
          Length = 918

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
 Frame = +2

Query: 923  GQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFT 1102
            G  ++S   T EV E+    N  L    + R     T L   D+L  L    PE+R +  
Sbjct: 787  GSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLA-RDMLQMLLDFLPEVRNKVE 845

Query: 1103 SPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTRE-----AYLELVQK 1267
                 + P+ L+ L+   H  C    +P      +++E+  R  T+E       LEL+ +
Sbjct: 846  EQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDE 905

Query: 1268 IRNV 1279
            + NV
Sbjct: 906  MDNV 909

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>P0AEC7:BARA_ECO57 Signal transduction histidine-protein kinase barA - Escherichia coli|
            O157:H7
          Length = 918

 Score = 34.7 bits (78), Expect = 1.7
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
 Frame = +2

Query: 923  GQNVNSYNDTSEVEELEPGKNWQLSEGFSSRCKVKNTGLRFADLLDQLSLEYPEMRFRFT 1102
            G  ++S   T EV E+    N  L    + R     T L   D+L  L    PE+R +  
Sbjct: 787  GSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLA-RDMLQMLLDFLPEVRNKVE 845

Query: 1103 SPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGYTRE-----AYLELVQK 1267
                 + P+ L+ L+   H  C    +P      +++E+  R  T+E       LEL+ +
Sbjct: 846  EQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDE 905

Query: 1268 IRNV 1279
            + NV
Sbjct: 906  MDNV 909

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>Q9K7C9:LIPA_BACHD Lipoyl synthase - Bacillus halodurans|
          Length = 303

 Score = 32.7 bits (73), Expect = 6.6
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
 Frame = +2

Query: 1217 RMKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDMAYM 1396
            R++   T E  LE +++ + + PD+   S  + G   ET+D+  +T+  +RA   D+  +
Sbjct: 176  RVRARATYERSLEFLRRAKEMQPDIPTKSSLMIGL-GETKDEIIETMDDLRANNVDIMTI 234

Query: 1397 FAYSMREKTH--AHRNYEDDVPNDVKQRRLAE 1486
              Y    K H    + Y  D   ++K+  L++
Sbjct: 235  GQYLQPTKKHLKVQKYYHPDEFAELKEIALSK 266

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>Q8DLC2:LIPA1_SYNEL Lipoyl synthase 1 - Synechococcus elongatus (Thermosynechococcus|
            elongatus)
          Length = 290

 Score = 32.7 bits (73), Expect = 6.6
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +2

Query: 1220 MKRGYTREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSIVRAVGYDMAYMF 1399
            ++RG T E+ L ++  ++ + PD+   S  + G   ETE +  +TL  +R VG D   + 
Sbjct: 180  VRRGATYESSLRVLATVKELNPDIPTKSGLMLGL-GETEAEIIETLKDLRRVGCDRLTLG 238

Query: 1400 AYSMREKTH 1426
             Y     +H
Sbjct: 239  QYLPPSLSH 247

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>P20702:ITAX_HUMAN Integrin alpha-X precursor - Homo sapiens (Human)|
          Length = 1163

 Score = 32.7 bits (73), Expect = 6.6
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = +2

Query: 296 RIYHETYGCQMNVNDMEIVLSIMKKEG----YNDIVPDPESAEII 418
           R++H +YG + +   + IV++  KKEG    Y D++P  ++A II
Sbjct: 238 RLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGII 282


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 383,395,728
Number of extensions: 8404364
Number of successful extensions: 21558
Number of sequences better than 10.0: 55
Number of HSP's gapped: 21371
Number of HSP's successfully gapped: 60
Length of query: 745
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 624
Effective length of database: 67,496,744
Effective search space: 42117968256
Effective search space used: 42117968256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result