ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64k16 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832792.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110K13, full insert sequence Length = 2213 Score = 1465 bits (739), Expect = 0.0 Identities = 1372/1583 (86%) Strand = Plus / Plus Query: 229 cgccgccacggacgtctctgagccccagacagattcagagtctggtacagcgactgtaaa 288 ||||||||||| ||| || ||| | |||||||||| |||||||||| | | ||| | || Sbjct: 280 cgccgccacggccgtgtccgaggcgcagacagatttagagtctggtccggtgacagcaag 339 Query: 289 gaagggacgcatctaccatgaaacgtacgggtgtcagatgaatgtaaatgatatggagat 348 ||||| ||||| |||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 340 caagggtcgcatttaccatgagacatatgggtgccaaatgaatgtaaacgacatggagat 399 Query: 349 tgtgctgtctatcatgaaaaaggaagggtacaatgacattgttcctgaccctgagagtgc 408 ||||| |||||||||||||| |||||||| |||| ||||| ||||||||||||||||| Sbjct: 400 cgtgctttctatcatgaaaaatgaagggtatgatgaaattgtccctgaccctgagagtgc 459 Query: 409 agagataatatttatcaacacctgtgcaattcgtgacaatgcagaacagaaagtttggca 468 ||||||||||||||||||||| |||||||| |||||||| ||||| |||||||| ||||| Sbjct: 460 agagataatatttatcaacacatgtgcaatccgtgacaacgcagagcagaaagtctggca 519 Query: 469 gcggctcaactacttttggttcctgaaaaggcaatggaaaactaatgtcgctggagggag 528 ||| || ||||||||||||||||||||||||||||||||| ||||||| |||| |||| | Sbjct: 520 gcgactgaactacttttggttcctgaaaaggcaatggaaagctaatgttgctgcagggcg 579 Query: 529 atctaagtctctgcgtcctcctaagattgctgttctcgggtgcatggcagagcgactgaa 588 || | |||||||| ||||| |||||||||||||| |||||||||||||||||| |||| Sbjct: 580 gtcaagatctctgcggcctccaaagattgctgttcttgggtgcatggcagagcgattgaa 639 Query: 589 ggagaaaatactcgactccgataagatggttgatgttgtatgtggtccggatgcgtacag 648 ||||||||| ||||| || |||||||||||||||||||| ||||| || |||||||| || Sbjct: 640 ggagaaaattctcgattctgataagatggttgatgttgtctgtggacctgatgcgtatag 699 Query: 649 ggacttgcctaggctgctgcaagaagtggattatgggcagaagggtatcaacacactcct 708 ||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || Sbjct: 700 ggacttgcctaggttgctgcaggaagttgattatgggcagaagggtatcaacacgcttct 759 Query: 709 ctcactggaggagacttatgctgacatcaccccagttaggatttctgacaattcggttac 768 |||||| |||||||| |||||||||||||||||||||||||| ||||||||||| || || Sbjct: 760 ctcactcgaggagacatatgctgacatcaccccagttaggatctctgacaattcagtgac 819 Query: 769 ggcgttcgtgtcagttatgaggggttgtaacaatatgtgctcgttttgcattgttccctt 828 || || || ||| ||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 820 cgcatttgtatcaattatgaggggttgcaacaatatgtgctccttttgtatcgttccttt 879 Query: 829 cactagaggcagggagaggtcacgcccagtatcttctgttgtccgagaagttggtgagct 888 ||||||||| ||||| ||||| || ||||| || || |||||||||||||||| ||||| Sbjct: 880 cactagaggtagggaaaggtcccgtccagtgtcctcaattgtccgagaagttggggagct 939 Query: 889 ctggtatgctggcgtaaaagaagtaatgcttcttggtcagaatgtaaacagttataatga 948 |||| | || ||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 940 ctggaaagcaggcgtgaaggaagtaatgcttcttggtcagaacgtaaacagttataacga 999 Query: 949 tacttctgaagttgaggagttagagcctggtaaaaactggcagctcagcgaaggattttc 1008 ||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||| ||||| Sbjct: 1000 cacttctgaagttgaggaattagaacctggtaaaaactgggagctcagtgaagggttttc 1059 Query: 1009 cagcaggtgcaaagtgaagaatacggggttgcgctttgccgatctcctggatcagttgtc 1068 |||| |||||| |||||||||| ||||||||| ||||| ||||||||||||||||| || Sbjct: 1060 tagcatgtgcaaggtgaagaatatggggttgcgttttgctgatctcctggatcagttatc 1119 Query: 1069 tctggaataccctgagatgcgattcaggtttacctctccacatccaaaggattttcctga 1128 | ||||||||||||||||||| ||||||||||||||||| ||||||||||||| || || Sbjct: 1120 tttggaataccctgagatgcggttcaggtttacctctccgcatccaaaggattacccaga 1179 Query: 1129 tgagctgctatatttgatgcgggataggcacaatatttgcaaacttattcacttgcctgc 1188 ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||| || Sbjct: 1180 cgagcttctatatttaatgcgggataggcacaatgtttgcaaacttattcatatgccagc 1239 Query: 1189 acaatcaggcagcacagaggtgctggaacgaatgaagcggggttatactcgagaagcata 1248 |||||||||||| ||| ||||||||||| ||| |||||||||||| |||| ||||| Sbjct: 1240 tcaatcaggcagctcagcagtgctggaacgtatgcgtcggggttatactagagaggcata 1299 Query: 1249 tttggagcttgtacagaaaatccgtaatgtcattccagatgttgggctaagcagtgattt 1308 ||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||| Sbjct: 1300 cttggagcttgtgcagaaaatccgtagtatcattccagatgttgggttaagcagtgattt 1359 Query: 1309 cataagtggcttctgtgaagagacagaagatgaccatgccgacactcttagcattgtaag 1368 ||||||||| || |||| |||||||||||| || ||||| || ||||||| | ||||||| Sbjct: 1360 cataagtggtttttgtggagagacagaagaggaacatgctgagactcttacccttgtaag 1419 Query: 1369 ggctgttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgc 1428 ||||||||||||||||||||| ||||||||||| |||||||||||||| || || ||||| Sbjct: 1420 ggctgttggatatgatatggcctacatgtttgcatatagcatgagagaaaagactcatgc 1479 Query: 1429 tcatcggaattatgaggatgatgtccccaatgatgttaagcagaggagacttgcagaact 1488 |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| || Sbjct: 1480 tcatcggaattatgtggatgatgtccctgatgatgtcaagcagaggagacttgcagagct 1539 Query: 1489 gatcaacaccttccgtgagaccacaagaaagatctatgattctcagattggtaccactca 1548 |||| |||||||||||| || ||| |||||||| ||||||||| |||| || || Sbjct: 1540 aatcagcaccttccgtgaaactacagcgaagatctacgattctcaggttgggacagtaca 1599 Query: 1549 agtagttctagtcgagggacctaataagcgagctcctgaaacagagctgtttggtaaaac 1608 ||||||||||||||||||| || ||||| ||||||||||||||| || |||| ||||| Sbjct: 1600 gctagttctagtcgagggaccgaacaagcgggctcctgaaacagagatgattggaaaaac 1659 Query: 1609 tgaccgggggcacagggtttcgtttactagtctccctgtaacacatacatctgaaggtga 1668 ||| ||||||| |||||||||||| | || |||||||| | ||||||| ||||||||| Sbjct: 1660 cgacagggggcatagggtttcgtttgcgagcgtccctgtaccgcatacatttgaaggtga 1719 Query: 1669 cggagctcgtaagccagtggttggtgactttgttgaggtaaaaattctcaggtcatcgac 1728 | | || |||||||||||||||||||| ||||||| ||||| || ||||||||| Sbjct: 1720 tgaactgcgcaagccagtggttggtgacttcattgaggtgaaaatcaccaagtcatcgac 1779 Query: 1729 agcatcgttatctggagagccaattgcacgcacaagcttgggcatgtactgcaagaatca 1788 |||||| ||||| || || ||| || |||||||||||| ||| || || ||||||||| Sbjct: 1780 agcatcattatccggggatgtaatcgcgcgcacaagcttgagcaagttctacaagaatca 1839 Query: 1789 tgcatctgacgcacatgttgttg 1811 | ||||||| ||||||| ||||| Sbjct: 1840 ttcatctgaagcacatgctgttg 1862
>ref|NM_001074728.1| Oryza sativa (japonica cultivar-group) Os11g0592800 (Os11g0592800) mRNA, complete cds Length = 2155 Score = 1457 bits (735), Expect = 0.0 Identities = 1371/1583 (86%) Strand = Plus / Plus Query: 229 cgccgccacggacgtctctgagccccagacagattcagagtctggtacagcgactgtaaa 288 ||||||||||| ||| || ||| | |||||||||| |||||||||| | | ||| | || Sbjct: 222 cgccgccacggccgtgtccgaggcgcagacagatttagagtctggtccggtgacagcaag 281 Query: 289 gaagggacgcatctaccatgaaacgtacgggtgtcagatgaatgtaaatgatatggagat 348 ||||| ||||| |||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 282 caagggtcgcatttaccatgagacatatgggtgccaaatgaatgtaaacgacatggagat 341 Query: 349 tgtgctgtctatcatgaaaaaggaagggtacaatgacattgttcctgaccctgagagtgc 408 ||||| |||||||||||||| |||||||| |||| ||||| ||||||||||||||||| Sbjct: 342 cgtgctttctatcatgaaaaatgaagggtatgatgaaattgtccctgaccctgagagtgc 401 Query: 409 agagataatatttatcaacacctgtgcaattcgtgacaatgcagaacagaaagtttggca 468 ||||||||||||||||||||| |||||||| |||||||| ||||| |||||||| ||||| Sbjct: 402 agagataatatttatcaacacatgtgcaatccgtgacaacgcagagcagaaagtctggca 461 Query: 469 gcggctcaactacttttggttcctgaaaaggcaatggaaaactaatgtcgctggagggag 528 ||| || ||||||||||||||||||||||||||||||||| ||||||| |||| |||| | Sbjct: 462 gcgactgaactacttttggttcctgaaaaggcaatggaaagctaatgttgctgcagggcg 521 Query: 529 atctaagtctctgcgtcctcctaagattgctgttctcgggtgcatggcagagcgactgaa 588 || | |||||||| ||||| |||||||| ||||| |||||||||||||||||| |||| Sbjct: 522 gtcaagatctctgcggcctccaaagattgccgttcttgggtgcatggcagagcgattgaa 581 Query: 589 ggagaaaatactcgactccgataagatggttgatgttgtatgtggtccggatgcgtacag 648 ||||||||| ||||| || |||||||||||||||||||| ||||| || |||||||| || Sbjct: 582 ggagaaaattctcgattctgataagatggttgatgttgtctgtggacctgatgcgtatag 641 Query: 649 ggacttgcctaggctgctgcaagaagtggattatgggcagaagggtatcaacacactcct 708 ||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || Sbjct: 642 ggacttgcctaggttgctgcaggaagttgattatgggcagaagggtatcaacacgcttct 701 Query: 709 ctcactggaggagacttatgctgacatcaccccagttaggatttctgacaattcggttac 768 |||||| |||||||| |||||||||||||||||||||||||| ||||||||||| || || Sbjct: 702 ctcactcgaggagacgtatgctgacatcaccccagttaggatctctgacaattcagtgac 761 Query: 769 ggcgttcgtgtcagttatgaggggttgtaacaatatgtgctcgttttgcattgttccctt 828 || || || ||| ||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 762 cgcatttgtatcaattatgaggggttgcaacaatatgtgctccttttgtatcgttccttt 821 Query: 829 cactagaggcagggagaggtcacgcccagtatcttctgttgtccgagaagttggtgagct 888 ||||||||| ||||| ||||| || ||||| || || |||||||||||||||| ||||| Sbjct: 822 cactagaggtagggaaaggtcccgtccagtgtcctcaattgtccgagaagttggggagct 881 Query: 889 ctggtatgctggcgtaaaagaagtaatgcttcttggtcagaatgtaaacagttataatga 948 |||| | || ||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 882 ctggaaagcaggcgtgaaggaagtaatgcttcttggtcagaacgtaaacagttataacga 941 Query: 949 tacttctgaagttgaggagttagagcctggtaaaaactggcagctcagcgaaggattttc 1008 ||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||| ||||| Sbjct: 942 cacttctgaagttgaggaattagaacctggtaaaaactgggagctcagtgaagggttttc 1001 Query: 1009 cagcaggtgcaaagtgaagaatacggggttgcgctttgccgatctcctggatcagttgtc 1068 |||| |||||| |||||||||| ||||||||| ||||| ||||||||||||||||| || Sbjct: 1002 tagcatgtgcaaggtgaagaatatggggttgcgttttgctgatctcctggatcagttatc 1061 Query: 1069 tctggaataccctgagatgcgattcaggtttacctctccacatccaaaggattttcctga 1128 | ||||||||||||||||||| ||||||||||||||||| ||||||||||||| || || Sbjct: 1062 tttggaataccctgagatgcggttcaggtttacctctccgcatccaaaggattacccaga 1121 Query: 1129 tgagctgctatatttgatgcgggataggcacaatatttgcaaacttattcacttgcctgc 1188 ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||| || Sbjct: 1122 cgagcttctatatttaatgcgggataggcacaatgtttgcaaacttattcatatgccagc 1181 Query: 1189 acaatcaggcagcacagaggtgctggaacgaatgaagcggggttatactcgagaagcata 1248 |||||||||||| ||| ||||||||||| ||| |||||||||||| |||| ||||| Sbjct: 1182 tcaatcaggcagctcagcagtgctggaacgtatgcgtcggggttatactagagaggcata 1241 Query: 1249 tttggagcttgtacagaaaatccgtaatgtcattccagatgttgggctaagcagtgattt 1308 ||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||| Sbjct: 1242 cttggagcttgtgcagaaaatccgtagtatcattccagatgttgggttaagcagtgattt 1301 Query: 1309 cataagtggcttctgtgaagagacagaagatgaccatgccgacactcttagcattgtaag 1368 ||||||||| || |||| |||||||||||| || ||||| || ||||||| | ||||||| Sbjct: 1302 cataagtggtttttgtggagagacagaagaggaacatgctgagactcttacccttgtaag 1361 Query: 1369 ggctgttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgc 1428 ||||||||||||||||||||| ||||||||||| |||||||||||||| || || ||||| Sbjct: 1362 ggctgttggatatgatatggcctacatgtttgcatatagcatgagagaaaagactcatgc 1421 Query: 1429 tcatcggaattatgaggatgatgtccccaatgatgttaagcagaggagacttgcagaact 1488 |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| || Sbjct: 1422 tcatcggaattatgtggatgatgtccccgatgatgtcaagcagaggagacttgcagagct 1481 Query: 1489 gatcaacaccttccgtgagaccacaagaaagatctatgattctcagattggtaccactca 1548 |||| |||||||||||| || ||| |||||||| ||||||||| |||| || || Sbjct: 1482 aatcagcaccttccgtgaaactacagcgaagatctacgattctcaggttgggacagtaca 1541 Query: 1549 agtagttctagtcgagggacctaataagcgagctcctgaaacagagctgtttggtaaaac 1608 ||||||||||||||||||| || ||||| ||||||||||||||| || |||| ||||| Sbjct: 1542 gctagttctagtcgagggaccgaacaagcgggctcctgaaacagagatgattggaaaaac 1601 Query: 1609 tgaccgggggcacagggtttcgtttactagtctccctgtaacacatacatctgaaggtga 1668 ||| ||||||| |||||||||||| | || |||||||| | ||||||| ||||||||| Sbjct: 1602 cgacagggggcatagggtttcgtttgcgagcgtccctgtaccgcatacatttgaaggtga 1661 Query: 1669 cggagctcgtaagccagtggttggtgactttgttgaggtaaaaattctcaggtcatcgac 1728 | | || |||||||||||||||||||| ||||||| ||||| || ||||||||| Sbjct: 1662 tgaactgcgcaagccagtggttggtgacttcattgaggtgaaaatcaccaagtcatcgac 1721 Query: 1729 agcatcgttatctggagagccaattgcacgcacaagcttgggcatgtactgcaagaatca 1788 |||||| ||||| || || ||| || |||||||||||| ||| | || ||||||||| Sbjct: 1722 agcatcattatccggggatgtaatcgcgcgcacaagcttgagcaaattctacaagaatca 1781 Query: 1789 tgcatctgacgcacatgttgttg 1811 | ||||||| ||||||| ||||| Sbjct: 1782 ttcatctgaagcacatgctgttg 1804
>dbj|AK066319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A17, full insert sequence Length = 2156 Score = 1457 bits (735), Expect = 0.0 Identities = 1371/1583 (86%) Strand = Plus / Plus Query: 229 cgccgccacggacgtctctgagccccagacagattcagagtctggtacagcgactgtaaa 288 ||||||||||| ||| || ||| | |||||||||| |||||||||| | | ||| | || Sbjct: 223 cgccgccacggccgtgtccgaggcgcagacagatttagagtctggtccggtgacagcaag 282 Query: 289 gaagggacgcatctaccatgaaacgtacgggtgtcagatgaatgtaaatgatatggagat 348 ||||| ||||| |||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 283 caagggtcgcatttaccatgagacatatgggtgccaaatgaatgtaaacgacatggagat 342 Query: 349 tgtgctgtctatcatgaaaaaggaagggtacaatgacattgttcctgaccctgagagtgc 408 ||||| |||||||||||||| |||||||| |||| ||||| ||||||||||||||||| Sbjct: 343 cgtgctttctatcatgaaaaatgaagggtatgatgaaattgtccctgaccctgagagtgc 402 Query: 409 agagataatatttatcaacacctgtgcaattcgtgacaatgcagaacagaaagtttggca 468 ||||||||||||||||||||| |||||||| |||||||| ||||| |||||||| ||||| Sbjct: 403 agagataatatttatcaacacatgtgcaatccgtgacaacgcagagcagaaagtctggca 462 Query: 469 gcggctcaactacttttggttcctgaaaaggcaatggaaaactaatgtcgctggagggag 528 ||| || ||||||||||||||||||||||||||||||||| ||||||| |||| |||| | Sbjct: 463 gcgactgaactacttttggttcctgaaaaggcaatggaaagctaatgttgctgcagggcg 522 Query: 529 atctaagtctctgcgtcctcctaagattgctgttctcgggtgcatggcagagcgactgaa 588 || | |||||||| ||||| |||||||| ||||| |||||||||||||||||| |||| Sbjct: 523 gtcaagatctctgcggcctccaaagattgccgttcttgggtgcatggcagagcgattgaa 582 Query: 589 ggagaaaatactcgactccgataagatggttgatgttgtatgtggtccggatgcgtacag 648 ||||||||| ||||| || |||||||||||||||||||| ||||| || |||||||| || Sbjct: 583 ggagaaaattctcgattctgataagatggttgatgttgtctgtggacctgatgcgtatag 642 Query: 649 ggacttgcctaggctgctgcaagaagtggattatgggcagaagggtatcaacacactcct 708 ||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || Sbjct: 643 ggacttgcctaggttgctgcaggaagttgattatgggcagaagggtatcaacacgcttct 702 Query: 709 ctcactggaggagacttatgctgacatcaccccagttaggatttctgacaattcggttac 768 |||||| |||||||| |||||||||||||||||||||||||| ||||||||||| || || Sbjct: 703 ctcactcgaggagacgtatgctgacatcaccccagttaggatctctgacaattcagtgac 762 Query: 769 ggcgttcgtgtcagttatgaggggttgtaacaatatgtgctcgttttgcattgttccctt 828 || || || ||| ||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 763 cgcatttgtatcaattatgaggggttgcaacaatatgtgctccttttgtatcgttccttt 822 Query: 829 cactagaggcagggagaggtcacgcccagtatcttctgttgtccgagaagttggtgagct 888 ||||||||| ||||| ||||| || ||||| || || |||||||||||||||| ||||| Sbjct: 823 cactagaggtagggaaaggtcccgtccagtgtcctcaattgtccgagaagttggggagct 882 Query: 889 ctggtatgctggcgtaaaagaagtaatgcttcttggtcagaatgtaaacagttataatga 948 |||| | || ||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 883 ctggaaagcaggcgtgaaggaagtaatgcttcttggtcagaacgtaaacagttataacga 942 Query: 949 tacttctgaagttgaggagttagagcctggtaaaaactggcagctcagcgaaggattttc 1008 ||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||| ||||| Sbjct: 943 cacttctgaagttgaggaattagaacctggtaaaaactgggagctcagtgaagggttttc 1002 Query: 1009 cagcaggtgcaaagtgaagaatacggggttgcgctttgccgatctcctggatcagttgtc 1068 |||| |||||| |||||||||| ||||||||| ||||| ||||||||||||||||| || Sbjct: 1003 tagcatgtgcaaggtgaagaatatggggttgcgttttgctgatctcctggatcagttatc 1062 Query: 1069 tctggaataccctgagatgcgattcaggtttacctctccacatccaaaggattttcctga 1128 | ||||||||||||||||||| ||||||||||||||||| ||||||||||||| || || Sbjct: 1063 tttggaataccctgagatgcggttcaggtttacctctccgcatccaaaggattacccaga 1122 Query: 1129 tgagctgctatatttgatgcgggataggcacaatatttgcaaacttattcacttgcctgc 1188 ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||| || Sbjct: 1123 cgagcttctatatttaatgcgggataggcacaatgtttgcaaacttattcatatgccagc 1182 Query: 1189 acaatcaggcagcacagaggtgctggaacgaatgaagcggggttatactcgagaagcata 1248 |||||||||||| ||| ||||||||||| ||| |||||||||||| |||| ||||| Sbjct: 1183 tcaatcaggcagctcagcagtgctggaacgtatgcgtcggggttatactagagaggcata 1242 Query: 1249 tttggagcttgtacagaaaatccgtaatgtcattccagatgttgggctaagcagtgattt 1308 ||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||| Sbjct: 1243 cttggagcttgtgcagaaaatccgtagtatcattccagatgttgggttaagcagtgattt 1302 Query: 1309 cataagtggcttctgtgaagagacagaagatgaccatgccgacactcttagcattgtaag 1368 ||||||||| || |||| |||||||||||| || ||||| || ||||||| | ||||||| Sbjct: 1303 cataagtggtttttgtggagagacagaagaggaacatgctgagactcttacccttgtaag 1362 Query: 1369 ggctgttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgc 1428 ||||||||||||||||||||| ||||||||||| |||||||||||||| || || ||||| Sbjct: 1363 ggctgttggatatgatatggcctacatgtttgcatatagcatgagagaaaagactcatgc 1422 Query: 1429 tcatcggaattatgaggatgatgtccccaatgatgttaagcagaggagacttgcagaact 1488 |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| || Sbjct: 1423 tcatcggaattatgtggatgatgtccccgatgatgtcaagcagaggagacttgcagagct 1482 Query: 1489 gatcaacaccttccgtgagaccacaagaaagatctatgattctcagattggtaccactca 1548 |||| |||||||||||| || ||| |||||||| ||||||||| |||| || || Sbjct: 1483 aatcagcaccttccgtgaaactacagcgaagatctacgattctcaggttgggacagtaca 1542 Query: 1549 agtagttctagtcgagggacctaataagcgagctcctgaaacagagctgtttggtaaaac 1608 ||||||||||||||||||| || ||||| ||||||||||||||| || |||| ||||| Sbjct: 1543 gctagttctagtcgagggaccgaacaagcgggctcctgaaacagagatgattggaaaaac 1602 Query: 1609 tgaccgggggcacagggtttcgtttactagtctccctgtaacacatacatctgaaggtga 1668 ||| ||||||| |||||||||||| | || |||||||| | ||||||| ||||||||| Sbjct: 1603 cgacagggggcatagggtttcgtttgcgagcgtccctgtaccgcatacatttgaaggtga 1662 Query: 1669 cggagctcgtaagccagtggttggtgactttgttgaggtaaaaattctcaggtcatcgac 1728 | | || |||||||||||||||||||| ||||||| ||||| || ||||||||| Sbjct: 1663 tgaactgcgcaagccagtggttggtgacttcattgaggtgaaaatcaccaagtcatcgac 1722 Query: 1729 agcatcgttatctggagagccaattgcacgcacaagcttgggcatgtactgcaagaatca 1788 |||||| ||||| || || ||| || |||||||||||| ||| | || ||||||||| Sbjct: 1723 agcatcattatccggggatgtaatcgcgcgcacaagcttgagcaaattctacaagaatca 1782 Query: 1789 tgcatctgacgcacatgttgttg 1811 | ||||||| ||||||| ||||| Sbjct: 1783 ttcatctgaagcacatgctgttg 1805
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 1086 bits (548), Expect = 0.0 Identities = 908/1028 (88%) Strand = Plus / Minus Query: 290 aagggacgcatctaccatgaaacgtacgggtgtcagatgaatgtaaatgatatggagatt 349 ||||| ||||| |||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 62309 aagggtcgcatttaccatgagacatatgggtgccaaatgaatgtaaacgacatggagatc 62250 Query: 350 gtgctgtctatcatgaaaaaggaagggtacaatgacattgttcctgaccctgagagtgca 409 ||||| |||||||||||||| |||||||| |||| ||||| |||||||||||||||||| Sbjct: 62249 gtgctttctatcatgaaaaatgaagggtatgatgaaattgtccctgaccctgagagtgca 62190 Query: 410 gagataatatttatcaacacctgtgcaattcgtgacaatgcagaacagaaagtttggcag 469 |||||||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||| Sbjct: 62189 gagataatatttatcaacacatgtgcaatccgtgacaacgcagagcagaaagtctggcag 62130 Query: 470 cggctcaactacttttggttcctgaaaaggcaatggaaaactaatgtcgctggagggaga 529 || || ||||||||||||||||||||||||||||||||| ||||||| |||| |||| | Sbjct: 62129 cgactgaactacttttggttcctgaaaaggcaatggaaagctaatgttgctgcagggcgg 62070 Query: 530 tctaagtctctgcgtcctcctaagattgctgttctcgggtgcatggcagagcgactgaag 589 || | |||||||| ||||| |||||||| ||||| |||||||||||||||||| ||||| Sbjct: 62069 tcaagatctctgcggcctccaaagattgccgttcttgggtgcatggcagagcgattgaag 62010 Query: 590 gagaaaatactcgactccgataagatggttgatgttgtatgtggtccggatgcgtacagg 649 |||||||| ||||| || |||||||||||||||||||| ||||| || |||||||| ||| Sbjct: 62009 gagaaaattctcgattctgataagatggttgatgttgtctgtggacctgatgcgtatagg 61950 Query: 650 gacttgcctaggctgctgcaagaagtggattatgggcagaagggtatcaacacactcctc 709 |||||||||||| ||||||| ||||| |||||||||||||||||||||||||| || ||| Sbjct: 61949 gacttgcctaggttgctgcaggaagttgattatgggcagaagggtatcaacacgcttctc 61890 Query: 710 tcactggaggagacttatgctgacatcaccccagttaggatttctgacaattcggttacg 769 ||||| |||||||| |||||||||||||||||||||||||| ||||||||||| || || Sbjct: 61889 tcactcgaggagacgtatgctgacatcaccccagttaggatctctgacaattcagtgacc 61830 Query: 770 gcgttcgtgtcagttatgaggggttgtaacaatatgtgctcgttttgcattgttcccttc 829 || || || ||| ||||||||||||| |||||||||||||| ||||| || ||||| ||| Sbjct: 61829 gcatttgtatcaattatgaggggttgcaacaatatgtgctccttttgtatcgttcctttc 61770 Query: 830 actagaggcagggagaggtcacgcccagtatcttctgttgtccgagaagttggtgagctc 889 |||||||| ||||| ||||| || ||||| || || |||||||||||||||| |||||| Sbjct: 61769 actagaggtagggaaaggtcccgtccagtgtcctcaattgtccgagaagttggggagctc 61710 Query: 890 tggtatgctggcgtaaaagaagtaatgcttcttggtcagaatgtaaacagttataatgat 949 ||| | || ||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 61709 tggaaagcaggcgtgaaggaagtaatgcttcttggtcagaacgtaaacagttataacgac 61650 Query: 950 acttctgaagttgaggagttagagcctggtaaaaactggcagctcagcgaaggattttcc 1009 ||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||| ||||| Sbjct: 61649 acttctgaagttgaggaattagaacctggtaaaaactgggagctcagtgaagggttttct 61590 Query: 1010 agcaggtgcaaagtgaagaatacggggttgcgctttgccgatctcctggatcagttgtct 1069 |||| |||||| |||||||||| ||||||||| ||||| ||||||||||||||||| ||| Sbjct: 61589 agcatgtgcaaggtgaagaatatggggttgcgttttgctgatctcctggatcagttatct 61530 Query: 1070 ctggaataccctgagatgcgattcaggtttacctctccacatccaaaggattttcctgat 1129 ||||||||||||||||||| ||||||||||||||||| ||||||||||||| || || Sbjct: 61529 ttggaataccctgagatgcggttcaggtttacctctccgcatccaaaggattacccagac 61470 Query: 1130 gagctgctatatttgatgcgggataggcacaatatttgcaaacttattcacttgcctgca 1189 ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||| || Sbjct: 61469 gagcttctatatttaatgcgggataggcacaatgtttgcaaacttattcatatgccagct 61410 Query: 1190 caatcaggcagcacagaggtgctggaacgaatgaagcggggttatactcgagaagcatat 1249 |||||||||||| ||| ||||||||||| ||| |||||||||||| |||| ||||| Sbjct: 61409 caatcaggcagctcagcagtgctggaacgtatgcgtcggggttatactagagaggcatac 61350 Query: 1250 ttggagcttgtacagaaaatccgtaatgtcattccagatgttgggctaagcagtgatttc 1309 ||||||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 61349 ttggagcttgtgcagaaaatccgtagtatcattccagatgttgggttaagcagtgatttc 61290 Query: 1310 ataagtgg 1317 |||||||| Sbjct: 61289 ataagtgg 61282 Score = 361 bits (182), Expect = 7e-96 Identities = 413/490 (84%) Strand = Plus / Minus Query: 1322 tgtgaagagacagaagatgaccatgccgacactcttagcattgtaagggctgttggatat 1381 |||| |||||||||||| || ||||| || ||||||| | |||||||||||||||||||| Sbjct: 60503 tgtggagagacagaagaggaacatgctgagactcttacccttgtaagggctgttggatat 60444 Query: 1382 gatatggcttacatgtttgcttatagcatgagagagaaaacccatgctcatcggaattat 1441 |||||||| ||||||||||| |||||||||||||| || || |||||||||||||||||| Sbjct: 60443 gatatggcctacatgtttgcatatagcatgagagaaaagactcatgctcatcggaattat 60384 Query: 1442 gaggatgatgtccccaatgatgttaagcagaggagacttgcagaactgatcaacaccttc 1501 | ||||||||||||| ||||||| |||||||||||||||||||| || |||| ||||||| Sbjct: 60383 gtggatgatgtccccgatgatgtcaagcagaggagacttgcagagctaatcagcaccttc 60324 Query: 1502 cgtgagaccacaagaaagatctatgattctcagattggtaccactcaagtagttctagtc 1561 ||||| || ||| |||||||| ||||||||| |||| || || ||||||||||| Sbjct: 60323 cgtgaaactacagcgaagatctacgattctcaggttgggacagtacagctagttctagtc 60264 Query: 1562 gagggacctaataagcgagctcctgaaacagagctgtttggtaaaactgaccgggggcac 1621 |||||||| || ||||| ||||||||||||||| || |||| ||||| ||| ||||||| Sbjct: 60263 gagggaccgaacaagcgggctcctgaaacagagatgattggaaaaaccgacagggggcat 60204 Query: 1622 agggtttcgtttactagtctccctgtaacacatacatctgaaggtgacggagctcgtaag 1681 |||||||||||| | || |||||||| | ||||||| ||||||||| | | || ||| Sbjct: 60203 agggtttcgtttgcgagcgtccctgtaccgcatacatttgaaggtgatgaactgcgcaag 60144 Query: 1682 ccagtggttggtgactttgttgaggtaaaaattctcaggtcatcgacagcatcgttatct 1741 ||||||||||||||||| ||||||| ||||| || ||||||||||||||| ||||| Sbjct: 60143 ccagtggttggtgacttcattgaggtgaaaatcaccaagtcatcgacagcatcattatcc 60084 Query: 1742 ggagagccaattgcacgcacaagcttgggcatgtactgcaagaatcatgcatctgacgca 1801 || || ||| || |||||||||||| ||| | || |||||||||| ||||||| ||| Sbjct: 60083 ggggatgtaatcgcgcgcacaagcttgagcaaattctacaagaatcattcatctgaagca 60024 Query: 1802 catgttgttg 1811 |||| ||||| Sbjct: 60023 catgctgttg 60014
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 1086 bits (548), Expect = 0.0 Identities = 908/1028 (88%) Strand = Plus / Minus Query: 290 aagggacgcatctaccatgaaacgtacgggtgtcagatgaatgtaaatgatatggagatt 349 ||||| ||||| |||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 21710256 aagggtcgcatttaccatgagacatatgggtgccaaatgaatgtaaacgacatggagatc 21710197 Query: 350 gtgctgtctatcatgaaaaaggaagggtacaatgacattgttcctgaccctgagagtgca 409 ||||| |||||||||||||| |||||||| |||| ||||| |||||||||||||||||| Sbjct: 21710196 gtgctttctatcatgaaaaatgaagggtatgatgaaattgtccctgaccctgagagtgca 21710137 Query: 410 gagataatatttatcaacacctgtgcaattcgtgacaatgcagaacagaaagtttggcag 469 |||||||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||| Sbjct: 21710136 gagataatatttatcaacacatgtgcaatccgtgacaacgcagagcagaaagtctggcag 21710077 Query: 470 cggctcaactacttttggttcctgaaaaggcaatggaaaactaatgtcgctggagggaga 529 || || ||||||||||||||||||||||||||||||||| ||||||| |||| |||| | Sbjct: 21710076 cgactgaactacttttggttcctgaaaaggcaatggaaagctaatgttgctgcagggcgg 21710017 Query: 530 tctaagtctctgcgtcctcctaagattgctgttctcgggtgcatggcagagcgactgaag 589 || | |||||||| ||||| |||||||| ||||| |||||||||||||||||| ||||| Sbjct: 21710016 tcaagatctctgcggcctccaaagattgccgttcttgggtgcatggcagagcgattgaag 21709957 Query: 590 gagaaaatactcgactccgataagatggttgatgttgtatgtggtccggatgcgtacagg 649 |||||||| ||||| || |||||||||||||||||||| ||||| || |||||||| ||| Sbjct: 21709956 gagaaaattctcgattctgataagatggttgatgttgtctgtggacctgatgcgtatagg 21709897 Query: 650 gacttgcctaggctgctgcaagaagtggattatgggcagaagggtatcaacacactcctc 709 |||||||||||| ||||||| ||||| |||||||||||||||||||||||||| || ||| Sbjct: 21709896 gacttgcctaggttgctgcaggaagttgattatgggcagaagggtatcaacacgcttctc 21709837 Query: 710 tcactggaggagacttatgctgacatcaccccagttaggatttctgacaattcggttacg 769 ||||| |||||||| |||||||||||||||||||||||||| ||||||||||| || || Sbjct: 21709836 tcactcgaggagacgtatgctgacatcaccccagttaggatctctgacaattcagtgacc 21709777 Query: 770 gcgttcgtgtcagttatgaggggttgtaacaatatgtgctcgttttgcattgttcccttc 829 || || || ||| ||||||||||||| |||||||||||||| ||||| || ||||| ||| Sbjct: 21709776 gcatttgtatcaattatgaggggttgcaacaatatgtgctccttttgtatcgttcctttc 21709717 Query: 830 actagaggcagggagaggtcacgcccagtatcttctgttgtccgagaagttggtgagctc 889 |||||||| ||||| ||||| || ||||| || || |||||||||||||||| |||||| Sbjct: 21709716 actagaggtagggaaaggtcccgtccagtgtcctcaattgtccgagaagttggggagctc 21709657 Query: 890 tggtatgctggcgtaaaagaagtaatgcttcttggtcagaatgtaaacagttataatgat 949 ||| | || ||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct: 21709656 tggaaagcaggcgtgaaggaagtaatgcttcttggtcagaacgtaaacagttataacgac 21709597 Query: 950 acttctgaagttgaggagttagagcctggtaaaaactggcagctcagcgaaggattttcc 1009 ||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||| ||||| Sbjct: 21709596 acttctgaagttgaggaattagaacctggtaaaaactgggagctcagtgaagggttttct 21709537 Query: 1010 agcaggtgcaaagtgaagaatacggggttgcgctttgccgatctcctggatcagttgtct 1069 |||| |||||| |||||||||| ||||||||| ||||| ||||||||||||||||| ||| Sbjct: 21709536 agcatgtgcaaggtgaagaatatggggttgcgttttgctgatctcctggatcagttatct 21709477 Query: 1070 ctggaataccctgagatgcgattcaggtttacctctccacatccaaaggattttcctgat 1129 ||||||||||||||||||| ||||||||||||||||| ||||||||||||| || || Sbjct: 21709476 ttggaataccctgagatgcggttcaggtttacctctccgcatccaaaggattacccagac 21709417 Query: 1130 gagctgctatatttgatgcgggataggcacaatatttgcaaacttattcacttgcctgca 1189 ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||| || Sbjct: 21709416 gagcttctatatttaatgcgggataggcacaatgtttgcaaacttattcatatgccagct 21709357 Query: 1190 caatcaggcagcacagaggtgctggaacgaatgaagcggggttatactcgagaagcatat 1249 |||||||||||| ||| ||||||||||| ||| |||||||||||| |||| ||||| Sbjct: 21709356 caatcaggcagctcagcagtgctggaacgtatgcgtcggggttatactagagaggcatac 21709297 Query: 1250 ttggagcttgtacagaaaatccgtaatgtcattccagatgttgggctaagcagtgatttc 1309 ||||||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 21709296 ttggagcttgtgcagaaaatccgtagtatcattccagatgttgggttaagcagtgatttc 21709237 Query: 1310 ataagtgg 1317 |||||||| Sbjct: 21709236 ataagtgg 21709229 Score = 361 bits (182), Expect = 7e-96 Identities = 413/490 (84%) Strand = Plus / Minus Query: 1322 tgtgaagagacagaagatgaccatgccgacactcttagcattgtaagggctgttggatat 1381 |||| |||||||||||| || ||||| || ||||||| | |||||||||||||||||||| Sbjct: 21708450 tgtggagagacagaagaggaacatgctgagactcttacccttgtaagggctgttggatat 21708391 Query: 1382 gatatggcttacatgtttgcttatagcatgagagagaaaacccatgctcatcggaattat 1441 |||||||| ||||||||||| |||||||||||||| || || |||||||||||||||||| Sbjct: 21708390 gatatggcctacatgtttgcatatagcatgagagaaaagactcatgctcatcggaattat 21708331 Query: 1442 gaggatgatgtccccaatgatgttaagcagaggagacttgcagaactgatcaacaccttc 1501 | ||||||||||||| ||||||| |||||||||||||||||||| || |||| ||||||| Sbjct: 21708330 gtggatgatgtccccgatgatgtcaagcagaggagacttgcagagctaatcagcaccttc 21708271 Query: 1502 cgtgagaccacaagaaagatctatgattctcagattggtaccactcaagtagttctagtc 1561 ||||| || ||| |||||||| ||||||||| |||| || || ||||||||||| Sbjct: 21708270 cgtgaaactacagcgaagatctacgattctcaggttgggacagtacagctagttctagtc 21708211 Query: 1562 gagggacctaataagcgagctcctgaaacagagctgtttggtaaaactgaccgggggcac 1621 |||||||| || ||||| ||||||||||||||| || |||| ||||| ||| ||||||| Sbjct: 21708210 gagggaccgaacaagcgggctcctgaaacagagatgattggaaaaaccgacagggggcat 21708151 Query: 1622 agggtttcgtttactagtctccctgtaacacatacatctgaaggtgacggagctcgtaag 1681 |||||||||||| | || |||||||| | ||||||| ||||||||| | | || ||| Sbjct: 21708150 agggtttcgtttgcgagcgtccctgtaccgcatacatttgaaggtgatgaactgcgcaag 21708091 Query: 1682 ccagtggttggtgactttgttgaggtaaaaattctcaggtcatcgacagcatcgttatct 1741 ||||||||||||||||| ||||||| ||||| || ||||||||||||||| ||||| Sbjct: 21708090 ccagtggttggtgacttcattgaggtgaaaatcaccaagtcatcgacagcatcattatcc 21708031 Query: 1742 ggagagccaattgcacgcacaagcttgggcatgtactgcaagaatcatgcatctgacgca 1801 || || ||| || |||||||||||| ||| | || |||||||||| ||||||| ||| Sbjct: 21708030 ggggatgtaatcgcgcgcacaagcttgagcaaattctacaagaatcattcatctgaagca 21707971 Query: 1802 catgttgttg 1811 |||| ||||| Sbjct: 21707970 catgctgttg 21707961
>gb|AC136451.9| Medicago truncatula clone mth2-17d19, complete sequence Length = 132473 Score = 121 bits (61), Expect = 1e-23 Identities = 166/201 (82%) Strand = Plus / Minus Query: 320 tgtcagatgaatgtaaatgatatggagattgtgctgtctatcatgaaaaaggaagggtac 379 ||||| ||||| || ||||||||||||||||| |||||||| |||||||| | ||| || Sbjct: 30905 tgtcaaatgaacgttaatgatatggagattgttctgtctataatgaaaaatgcaggctat 30846 Query: 380 aatgacattgttcctgaccctgagagtgcagagataatatttatcaacacctgtgcaatt 439 ||||| ||||| ||| ||||||| ||||||||||||||| |||||||| ||||| || Sbjct: 30845 aatgaaattgtgactgctcctgagaatgcagagataatattcatcaacacttgtgccata 30786 Query: 440 cgtgacaatgcagaacagaaagtttggcagcggctcaactacttttggttcctgaaaagg 499 | || ||||||||| |||||| |||||| |||| || ||||||||||| || |||||| Sbjct: 30785 agagataatgcagaaatgaaagtgtggcagaggcttaattacttttggtttcttaaaagg 30726 Query: 500 caatggaaaactaatgtcgct 520 | ||||| | ||||||||| Sbjct: 30725 aactggaaggcgaatgtcgct 30705 Score = 93.7 bits (47), Expect = 3e-15 Identities = 200/251 (79%) Strand = Plus / Minus Query: 587 aaggagaaaatactcgactccgataagatggttgatgttgtatgtggtccggatgcgtac 646 ||||| || |||||||| || || || |||||||||||||||||||| || ||||| || Sbjct: 30638 aaggaaaagatactcgattcagacaaaatggttgatgttgtatgtgggcctgatgcttat 30579 Query: 647 agggacttgcctaggctgctgcaagaagtggattatgggcagaagggtatcaacacactc 706 ||||| ||||| || | ||| |||| || || ||||| ||||| || || ||||| || Sbjct: 30578 agggatttgccacggttactggaagaggttgagtatggccagaaagggattaacactctt 30519 Query: 707 ctctcactggaggagacttatgctgacatcaccccagttaggatttctgacaattcggtt 766 || || || ||||| ||||||||||| || | |||||| |||| ||| | ||||| || Sbjct: 30518 ctttcccttgaggaaacttatgctgatattaatccagttcggatctctcagaattcaatt 30459 Query: 767 acggcgttcgtgtcagttatgaggggttgtaacaatatgtgctcgttttgcattgttccc 826 | || || || ||||| ||||||||||| ||||||||||| |||||||| ||||| || Sbjct: 30458 agtgcttttgtttcagtgatgaggggttgcaacaatatgtgttcgttttgtattgtacct 30399 Query: 827 ttcactagagg 837 || |||||||| Sbjct: 30398 tttactagagg 30388 Score = 79.8 bits (40), Expect = 4e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 1373 gttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgc 1428 ||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 26494 gttggttatgatatggcatacatgtttgcttatagcatgagggagaaaactcatgc 26439 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Minus Query: 1079 cctgagatgcgattcaggtttacctctccacatccaaaggattttcctgatgagctgcta 1138 ||||||||||| ||||| || || |||||||| || || |||| ||| ||||| ||||| Sbjct: 30143 cctgagatgcgtttcagattcacgtctccacaccctaaagattatccagatgaactgctt 30084 Query: 1139 tatttgatgcgggataggcacaatatttgcaaacttattcacttgcctgcacaatcagg 1197 ||| | |||||||| || || ||||| |||||| | || || || ||||| |||||||| Sbjct: 30083 tatattatgcgggaaagacataatatatgcaaattgatacatttacctgcccaatcagg 30025
>dbj|AB120535.2| Nicotiana tabacum NtCAPL mRNA, complete cds Length = 2160 Score = 105 bits (53), Expect = 7e-19 Identities = 149/181 (82%) Strand = Plus / Plus Query: 1296 taagcagtgatttcataagtggcttctgtgaagagacagaagatgaccatgccgacactc 1355 |||||||||| |||||| |||| ||||||| ||| || ||||| || || | ||||| | Sbjct: 1405 taagcagtgacttcatatgtggtttctgtggagaaacggaagaggatcacgaagacacac 1464 Query: 1356 ttagcattgtaagggctgttggatatgatatggcttacatgtttgcttatagcatgagag 1415 | ||| | |||| ||||||| | ||||||||||| |||||||||||||| |||||||||| Sbjct: 1465 taagcctcgtaaaggctgtttgttatgatatggcatacatgtttgcttacagcatgagag 1524 Query: 1416 agaaaacccatgctcatcggaattatgaggatgatgtccccaatgatgttaagcagagga 1475 ||||||| ||||| || || || |||| |||||||| || ||||||| ||||| |||| Sbjct: 1525 agaaaacacatgcccaccgaaaatatgttgatgatgttcctgatgatgtcaagcaaagga 1584 Query: 1476 g 1476 | Sbjct: 1585 g 1585 Score = 93.7 bits (47), Expect = 3e-15 Identities = 173/215 (80%) Strand = Plus / Plus Query: 293 ggacgcatctaccatgaaacgtacgggtgtcagatgaatgtaaatgatatggagattgtg 352 ||||||||||| |||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 399 ggacgcatctatcatgaaacttatggatgtcaaatgaatgtcaatgatatggagattgtt 458 Query: 353 ctgtctatcatgaaaaaggaagggtacaatgacattgttcctgaccctgagagtgcagag 412 | || ||||||||||| | || |||| ||| | ||| | ||| || | ||| ||| Sbjct: 459 ttatccatcatgaaaaatgctggatacactgaaagtgtggaagtcccagaaaatgctgag 518 Query: 413 ataatatttatcaacacctgtgcaattcgtgacaatgcagaacagaaagtttggcagcgg 472 ||||||||||| || || ||||| || | ||||||||||||| || ||||||||| || Sbjct: 519 ataatatttataaatacttgtgctataagggacaatgcagaacttaaggtttggcagagg 578 Query: 473 ctcaactacttttggttcctgaaaaggcaatggaa 507 ||||| || |||||||| || || ||||||||||| Sbjct: 579 ctcaattatttttggtttcttaagaggcaatggaa 613 Score = 75.8 bits (38), Expect = 6e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 785 atgaggggttgtaacaatatgtgctcgttttgcattgttcccttcactagaggcagggag 844 ||||||||||| || ||||||||||| || ||||||||||||||||||||||| || || Sbjct: 891 atgaggggttgcaataatatgtgctcattctgcattgttcccttcactagagggagagaa 950 Query: 845 aggtcacgcccagt 858 |||| |||||||| Sbjct: 951 cggtctcgcccagt 964 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 917 cttcttggtcagaatgtaaacagttataatgatacttctgaagttga 963 |||||||| ||||||||||| || ||||||||||| |||| |||||| Sbjct: 1023 cttcttggccagaatgtaaatagctataatgatacatctggagttga 1069
>gb|BT013845.1| Lycopersicon esculentum clone 132802F, mRNA sequence Length = 2181 Score = 101 bits (51), Expect = 1e-17 Identities = 108/127 (85%) Strand = Plus / Plus Query: 1296 taagcagtgatttcataagtggcttctgtgaagagacagaagatgaccatgccgacactc 1355 |||||||||| |||||| |||| ||||||| ||| || ||||| || |||| ||||| | Sbjct: 1405 taagcagtgacttcatatgtggtttctgtggagaaacggaagaggatcatgaagacacac 1464 Query: 1356 ttagcattgtaagggctgttggatatgatatggcttacatgtttgcttatagcatgagag 1415 | ||| |||||| | ||||| | ||||||||||| |||||||||||||| |||||||||| Sbjct: 1465 taagccttgtaaagactgtttgttatgatatggcgtacatgtttgcttacagcatgagag 1524 Query: 1416 agaaaac 1422 ||||||| Sbjct: 1525 agaaaac 1531 Score = 93.7 bits (47), Expect = 3e-15 Identities = 173/215 (80%) Strand = Plus / Plus Query: 293 ggacgcatctaccatgaaacgtacgggtgtcagatgaatgtaaatgatatggagattgtg 352 ||||||||||| |||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 399 ggacgcatctatcatgaaacttatggatgtcaaatgaatgtcaatgatatggagattgtt 458 Query: 353 ctgtctatcatgaaaaaggaagggtacaatgacattgttcctgaccctgagagtgcagag 412 | || ||||||||||| | || |||| ||| | ||| | ||| || | ||| ||| Sbjct: 459 ttatccatcatgaaaaatgctggatacactgaaagtgtggaagtcccagaaaatgctgag 518 Query: 413 ataatatttatcaacacctgtgcaattcgtgacaatgcagaacagaaagtttggcagcgg 472 ||||||||||| || || ||||| || | ||||||||||||| || ||||||||| || Sbjct: 519 ataatatttataaatacttgtgctataagggacaatgcagaacttaaggtttggcagagg 578 Query: 473 ctcaactacttttggttcctgaaaaggcaatggaa 507 ||||| || |||||||| || || ||||||||||| Sbjct: 579 ctcaattatttttggtttcttaagaggcaatggaa 613 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 785 atgaggggttgtaacaatatgtgctcgttttgcattgttcccttcactagaggcagggag 844 ||||||||||| || |||||||| || || ||||||||||||||||||||||| || || Sbjct: 891 atgaggggttgcaataatatgtgttcattctgcattgttcccttcactagagggagagaa 950 Query: 845 aggtcacgcccagt 858 |||| |||||||| Sbjct: 951 cggtctcgcccagt 964 Score = 58.0 bits (29), Expect = 1e-04 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1106 ccacatccaaaggattttcctgatgagctgctatatttgatgcgggataggcacaatatt 1165 |||||||| || |||||||| ||||| || | ||| | |||||||| ||| ||||||| Sbjct: 1215 ccacatcctaaagattttccagatgatttgttgtatgtaatgcgggacaggtacaatatc 1274 Query: 1166 tgcaaacttattcacttgcctgcacaatcaggcagca 1202 |||||| ||||| ||||| |||||||||||||||| Sbjct: 1275 tgcaaaagcattcatttgccagcacaatcaggcagca 1311
>dbj|AP006712.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17E09, TM0627, complete sequence Length = 101220 Score = 91.7 bits (46), Expect = 1e-14 Identities = 139/170 (81%) Strand = Plus / Minus Query: 1370 gctgttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgct 1429 |||||||| ||||||||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct: 83872 gctgttggttatgatatggcatacatgtttgcttatagcatgagggagaaaacacacgct 83813 Query: 1430 catcggaattatgaggatgatgtccccaatgatgttaagcagaggagacttgcagaactg 1489 || | ||||||| |||||||| ||| | || || ||||| ||||| || | ||||| Sbjct: 83812 cacagaaattatgctgatgatgttcccgaggaagtaaagcaaaggaggctaactgaactc 83753 Query: 1490 atcaacaccttccgtgagaccacaagaaagatctatgattctcagattgg 1539 ||| | || ||||| |||| |||| ||||| |||||| |||||| |||| Sbjct: 83752 atcgagactttccgcgagagcacaggaaagtgctatgactctcaggttgg 83703 Score = 91.7 bits (46), Expect = 1e-14 Identities = 139/170 (81%) Strand = Plus / Minus Query: 320 tgtcagatgaatgtaaatgatatggagattgtgctgtctatcatgaaaaaggaagggtac 379 ||||| |||||||| ||||| ||||||||||| |||||||| |||||||| | || || Sbjct: 85446 tgtcaaatgaatgttaatgacatggagattgtcctgtctataatgaaaaacgctggctat 85387 Query: 380 aatgacattgttcctgaccctgagagtgcagagataatatttatcaacacctgtgcaatt 439 ||||| |||| || |||||||||||||| ||||||||||||||||| ||||| || Sbjct: 85386 aatgaagttgtgagtgctcctgagagtgcagaaataatatttatcaacacttgtgccatc 85327 Query: 440 cgtgacaatgcagaacagaaagtttggcagcggctcaactacttttggtt 489 | || ||||| |||| ||||| |||||| |||| || ||||||||||| Sbjct: 85326 agagagaatgcggaacttaaagtatggcagaggcttaattacttttggtt 85277 Score = 85.7 bits (43), Expect = 6e-13 Identities = 136/167 (81%) Strand = Plus / Minus Query: 686 cagaagggtatcaacacactcctctcactggaggagacttatgctgacatcaccccagtt 745 ||||| || |||||||| || || ||||| ||||||||||||||||| || | |||||| Sbjct: 85080 cagaaaggaatcaacactcttctttcacttgaggagacttatgctgatattaatccagtt 85021 Query: 746 aggatttctgacaattcggttacggcgttcgtgtcagttatgaggggttgtaacaatatg 805 | || || | || |||||| | || || || || || ||||||||||| ||||||||| Sbjct: 85020 cgaatctccaagaactcggtttccgcttttgtctccgtgatgaggggttgcaacaatatg 84961 Query: 806 tgctcgttttgcattgttcccttcactagaggcagggagaggtcacg 852 ||||| ||||| ||||| || |||||||||||||| ||| ||||||| Sbjct: 84960 tgctcattttgtattgtacctttcactagaggcagagagcggtcacg 84914 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Minus Query: 1079 cctgagatgcgattcaggtttacctctccacatccaaaggattttcctgatgagctgcta 1138 ||||||||||||||||| || ||||| ||||| || || |||||||| || || |||| Sbjct: 84684 cctgagatgcgattcagattcacctccccacaccctaaagattttccagacgaattgctc 84625 Query: 1139 tatttgatgcgggataggcacaatatttgcaaacttattcacttgcctgcacaatcagg 1197 ||| | ||||| || || || ||||| |||||| |||| || || ||||||||| |||| Sbjct: 84624 tatcttatgcgagaaagacataatatatgcaaagttatacatttacctgcacaaacagg 84566 Score = 48.1 bits (24), Expect = 0.14 Identities = 45/52 (86%) Strand = Plus / Minus Query: 905 aaagaagtaatgcttcttggtcagaatgtaaacagttataatgatacttctg 956 |||||||||| |||||||| ||||| || ||||| ||||||||||| |||| Sbjct: 84861 aaagaagtaacacttcttggccagaacgtgaacagctataatgatacatctg 84810
>ref|NM_119802.2| Arabidopsis thaliana catalytic/ iron ion binding (AT4G36390) mRNA, complete cds Length = 2158 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1373 gttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgctcat 1432 |||||||| |||||||| || |||||||| || ||||||||||| || || ||||||||| Sbjct: 1536 gttggatacgatatggcgtatatgtttgcatacagcatgagagaaaagacacatgctcat 1595 Query: 1433 cg 1434 || Sbjct: 1596 cg 1597 Score = 56.0 bits (28), Expect = 6e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 608 gataagatggttgatgttgtatgtggtccggatgcgtacagggacttgcctaggctgctg 667 ||||| |||||||||||||| |||||||| ||||| || || || | || ||||| || Sbjct: 777 gataaaatggttgatgttgtttgtggtcctgatgcttatagagatctcccgaggctattg 836 Query: 668 caagaagtggattatgggcagaagggtatcaacacactcctctcactggaggagacttat 727 ||||||| || ||||| || || || |||||||| || || || || || ||||||||| Sbjct: 837 gaagaagtagactatggtcaaaaaggaatcaacactcttctttctctagaagagacttat 896 Query: 728 gctgacat 735 |||||||| Sbjct: 897 gctgacat 904 Score = 42.1 bits (21), Expect = 8.6 Identities = 90/113 (79%) Strand = Plus / Plus Query: 1082 gagatgcgattcaggtttacctctccacatccaaaggattttcctgatgagctgctatat 1141 |||||||| || |||||||| || || ||||| || |||| ||||| ||| |||| ||| Sbjct: 1245 gagatgcggtttaggtttacatcgcctcatcctaaagattaccctgacgagttgctgtat 1304 Query: 1142 ttgatgcgggataggcacaatatttgcaaacttattcacttgcctgcacaatc 1194 |||||| | ||||| || ||||| ||||| || || || | ||||||||||| Sbjct: 1305 ttgatgagagatagacataatatctgcaatctcatccatcttcctgcacaatc 1357
>gb|BT008395.1| Arabidopsis thaliana At4g36390 gene, complete cds Length = 1923 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1373 gttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgctcat 1432 |||||||| |||||||| || |||||||| || ||||||||||| || || ||||||||| Sbjct: 1459 gttggatacgatatggcgtatatgtttgcatacagcatgagagaaaagacacatgctcat 1518 Query: 1433 cg 1434 || Sbjct: 1519 cg 1520 Score = 56.0 bits (28), Expect = 6e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 608 gataagatggttgatgttgtatgtggtccggatgcgtacagggacttgcctaggctgctg 667 ||||| |||||||||||||| |||||||| ||||| || || || | || ||||| || Sbjct: 700 gataaaatggttgatgttgtttgtggtcctgatgcttatagagatctcccgaggctattg 759 Query: 668 caagaagtggattatgggcagaagggtatcaacacactcctctcactggaggagacttat 727 ||||||| || ||||| || || || |||||||| || || || || || ||||||||| Sbjct: 760 gaagaagtagactatggtcaaaaaggaatcaacactcttctttctctagaagagacttat 819 Query: 728 gctgacat 735 |||||||| Sbjct: 820 gctgacat 827 Score = 42.1 bits (21), Expect = 8.6 Identities = 90/113 (79%) Strand = Plus / Plus Query: 1082 gagatgcgattcaggtttacctctccacatccaaaggattttcctgatgagctgctatat 1141 |||||||| || |||||||| || || ||||| || |||| ||||| ||| |||| ||| Sbjct: 1168 gagatgcggtttaggtttacatcgcctcatcctaaagattaccctgacgagttgctgtat 1227 Query: 1142 ttgatgcgggataggcacaatatttgcaaacttattcacttgcctgcacaatc 1194 |||||| | ||||| || ||||| ||||| || || || | ||||||||||| Sbjct: 1228 ttgatgagagatagacataatatctgcaatctcatccatcttcctgcacaatc 1280
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1373 gttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgctcat 1432 |||||||| |||||||| || |||||||| || ||||||||||| || || ||||||||| Sbjct: 174209 gttggatacgatatggcgtatatgtttgcatacagcatgagagaaaagacacatgctcat 174268 Query: 1433 cg 1434 || Sbjct: 174269 cg 174270 Score = 56.0 bits (28), Expect = 6e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 608 gataagatggttgatgttgtatgtggtccggatgcgtacagggacttgcctaggctgctg 667 ||||| |||||||||||||| |||||||| ||||| || || || | || ||||| || Sbjct: 173346 gataaaatggttgatgttgtttgtggtcctgatgcttatagagatctcccgaggctattg 173405 Query: 668 caagaagtggattatgggcagaagggtatcaacacactcctctcactggaggagacttat 727 ||||||| || ||||| || || || |||||||| || || || || || ||||||||| Sbjct: 173406 gaagaagtagactatggtcaaaaaggaatcaacactcttctttctctagaagagacttat 173465 Query: 728 gctgacat 735 |||||||| Sbjct: 173466 gctgacat 173473 Score = 42.1 bits (21), Expect = 8.6 Identities = 90/113 (79%) Strand = Plus / Plus Query: 1082 gagatgcgattcaggtttacctctccacatccaaaggattttcctgatgagctgctatat 1141 |||||||| || |||||||| || || ||||| || |||| ||||| ||| |||| ||| Sbjct: 173814 gagatgcggtttaggtttacatcgcctcatcctaaagattaccctgacgagttgctgtat 173873 Query: 1142 ttgatgcgggataggcacaatatttgcaaacttattcacttgcctgcacaatc 1194 |||||| | ||||| || ||||| ||||| || || || | ||||||||||| Sbjct: 173874 ttgatgagagatagacataatatctgcaatctcatccatcttcctgcacaatc 173926
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 1373 gttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgctcat 1432 |||||||| |||||||| || |||||||| || ||||||||||| || || ||||||||| Sbjct: 76519 gttggatacgatatggcgtatatgtttgcatacagcatgagagaaaagacacatgctcat 76460 Query: 1433 cg 1434 || Sbjct: 76459 cg 76458 Score = 56.0 bits (28), Expect = 6e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 608 gataagatggttgatgttgtatgtggtccggatgcgtacagggacttgcctaggctgctg 667 ||||| |||||||||||||| |||||||| ||||| || || || | || ||||| || Sbjct: 77382 gataaaatggttgatgttgtttgtggtcctgatgcttatagagatctcccgaggctattg 77323 Query: 668 caagaagtggattatgggcagaagggtatcaacacactcctctcactggaggagacttat 727 ||||||| || ||||| || || || |||||||| || || || || || ||||||||| Sbjct: 77322 gaagaagtagactatggtcaaaaaggaatcaacactcttctttctctagaagagacttat 77263 Query: 728 gctgacat 735 |||||||| Sbjct: 77262 gctgacat 77255 Score = 42.1 bits (21), Expect = 8.6 Identities = 90/113 (79%) Strand = Plus / Minus Query: 1082 gagatgcgattcaggtttacctctccacatccaaaggattttcctgatgagctgctatat 1141 |||||||| || |||||||| || || ||||| || |||| ||||| ||| |||| ||| Sbjct: 76914 gagatgcggtttaggtttacatcgcctcatcctaaagattaccctgacgagttgctgtat 76855 Query: 1142 ttgatgcgggataggcacaatatttgcaaacttattcacttgcctgcacaatc 1194 |||||| | ||||| || ||||| ||||| || || || | ||||||||||| Sbjct: 76854 ttgatgagagatagacataatatctgcaatctcatccatcttcctgcacaatc 76802
>gb|BT002022.1| Arabidopsis thaliana putative protein (At4g36390) mRNA, complete cds Length = 2086 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1373 gttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgctcat 1432 |||||||| |||||||| || |||||||| || ||||||||||| || || ||||||||| Sbjct: 1536 gttggatacgatatggcgtatatgtttgcatacagcatgagagaaaagacacatgctcat 1595 Query: 1433 cg 1434 || Sbjct: 1596 cg 1597 Score = 56.0 bits (28), Expect = 6e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 608 gataagatggttgatgttgtatgtggtccggatgcgtacagggacttgcctaggctgctg 667 ||||| |||||||||||||| |||||||| ||||| || || || | || ||||| || Sbjct: 777 gataaaatggttgatgttgtttgtggtcctgatgcttatagagatctcccgaggctattg 836 Query: 668 caagaagtggattatgggcagaagggtatcaacacactcctctcactggaggagacttat 727 ||||||| || ||||| || || || |||||||| || || || || || ||||||||| Sbjct: 837 gaagaagtagactatggtcaaaaaggaatcaacactcttctttctctagaagagacttat 896 Query: 728 gctgacat 735 |||||||| Sbjct: 897 gctgacat 904 Score = 42.1 bits (21), Expect = 8.6 Identities = 90/113 (79%) Strand = Plus / Plus Query: 1082 gagatgcgattcaggtttacctctccacatccaaaggattttcctgatgagctgctatat 1141 |||||||| || |||||||| || || ||||| || |||| ||||| ||| |||| ||| Sbjct: 1245 gagatgcggtttaggtttacatcgcctcatcctaaagattaccctgacgagttgctgtat 1304 Query: 1142 ttgatgcgggataggcacaatatttgcaaacttattcacttgcctgcacaatc 1194 |||||| | ||||| || ||||| ||||| || || || | ||||||||||| Sbjct: 1305 ttgatgagagatagacataatatctgcaatctcatccatcttcctgcacaatc 1357
>gb|AC189373.1| Brassica rapa subsp. pekinensis clone KBrB048F07, complete sequence Length = 161856 Score = 56.0 bits (28), Expect = 6e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 422 atcaacacctgtgcaattcgtgacaatgcagaacagaaagtttggcagcggctcaactac 481 |||||||| || || || |||||||| || || |||| ||| ||||| | ||||||||| Sbjct: 73241 atcaacacttgcgccatccgtgacaacgcggagcagagagtgtggcaaagactcaactac 73182 Query: 482 ttttggttcctgaaaaggcaatggaaaactaatgtcgctggagggagatctaagtc 537 || |||||||||||| | || |||||| | ||||| |||| ||| ||| ||||||| Sbjct: 73181 ttctggttcctgaaacgccagtggaaagccaatgtagctgaaggaagagctaagtc 73126 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Minus Query: 1373 gttggatatgatatggcttacatgtttgcttatagcatgagagagaaaacccatgctcat 1432 |||||||| || ||||| || |||||||| || |||||||||||||| || || |||||| Sbjct: 71682 gttggatacgacatggcgtatatgtttgcatacagcatgagagagaagacacacgctcat 71623 Query: 1433 cgg 1435 ||| Sbjct: 71622 cgg 71620
>emb|AL023581.1|HS45I4 Human DNA sequence from clone RP1-45I4 on chromosome 6q24.1-24.3 Contains part of a novel gene (FLJ32928), two novel genes, and the 5' end of the gene for androgen induced protein (AIG-1, CGI-103) (includes FLJ10485). Contains a CpG island, complete sequence Length = 137947 Score = 50.1 bits (25), Expect = 0.035 Identities = 28/29 (96%) Strand = Plus / Plus Query: 2093 atttttcatataattgtttttgcttactg 2121 ||||||||||||||| ||||||||||||| Sbjct: 100347 atttttcatataattttttttgcttactg 100375
>ref|XM_417464.2| PREDICTED: Gallus gallus CDK5 regulatory subunit associated protein 1 (CDK5RAP1), mRNA Length = 2294 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1397 tttgcttatagcatgagagagaaaaccc 1424 |||||||||||||||||| ||||||||| Sbjct: 1297 tttgcttatagcatgagacagaaaaccc 1324
>ref|NM_016082.3| Homo sapiens CDK5 regulatory subunit associated protein 1 (CDK5RAP1), transcript variant 2, mRNA Length = 1944 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1048 tttacctctccccaccccaaggattttcctgatgag 1083
>ref|NM_016408.2| Homo sapiens CDK5 regulatory subunit associated protein 1 (CDK5RAP1), transcript variant 1, mRNA Length = 2104 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1196 tttacctctccccaccccaaggattttcctgatgag 1231
>gb|AY462284.1| Homo sapiens CDK5 regulatory subunit associated protein 1 transcript variant 4 mRNA, complete cds, alternatively spliced Length = 1792 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1185 tttacctctccccaccccaaggattttcctgatgag 1220
>gb|AY462283.1| Homo sapiens CDK5 regulatory subunit associated protein 1 transcript variant 3 mRNA, complete cds, alternatively spliced Length = 1923 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1185 tttacctctccccaccccaaggattttcctgatgag 1220
>dbj|AK027449.1| Homo sapiens cDNA FLJ14543 fis, clone NT2RM2001524 Length = 1928 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1034 tttacctctccccaccccaaggattttcctgatgag 1069
>dbj|AK023992.1| Homo sapiens cDNA FLJ13930 fis, clone Y79AA1000748, moderately similar to Rattus norvegicus clone C42 CDK5 activator-binding protein mRNA Length = 2078 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1184 tttacctctccccaccccaaggattttcctgatgag 1219
>dbj|AK222745.1| Homo sapiens mRNA for CDK5 regulatory subunit associated protein 1 isoform a variant, clone: DMC05378 Length = 2095 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1184 tttacctctccccaccccaaggattttcctgatgag 1219
>emb|AL355392.7| Human DNA sequence from clone RP5-1187J4 on chromosome 20q11.1-11.23 Contains the gene for a novel protein similar to mouse von Ebner salivary gland protein, a novel pseudogene, the gene for a novel protein similar to rat RYF3, the CDK5RAP1 gene for CDK5 regulatory subunit associated protein 1, the SNTA1 gene for alpha syntrophin (dystrophin-associated protein A1, 59kD, acidic component) and two CpG islands, complete sequence Length = 159440 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 85379 tttacctctccccaccccaaggattttcctgatgag 85344
>gb|AF161516.1|AF161516 Homo sapiens HSPC167 mRNA, complete cds Length = 2091 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1182 tttacctctccccaccccaaggattttcctgatgag 1217
>emb|CR592631.1| full-length cDNA clone CS0DD008YA07 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1918 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1047 tttacctctccccaccccaaggattttcctgatgag 1082
>gb|AF152097.1|AF152097 Homo sapiens CGI-05 protein mRNA, complete cds Length = 2115 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1212 tttacctctccccaccccaaggattttcctgatgag 1247
>gb|BC050706.1| Homo sapiens CDK5 regulatory subunit associated protein 1, mRNA (cDNA clone MGC:60311 IMAGE:4418659), complete cds Length = 2082 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcctgatgag 1132 ||||||||||| || || |||||||||||||||||| Sbjct: 1177 tttacctctccccaccccaaggattttcctgatgag 1212
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 46.1 bits (23), Expect = 0.55 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1503 gtgagaccacaagaaagatctat 1525 ||||||||||||||||||||||| Sbjct: 124763 gtgagaccacaagaaagatctat 124785
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 46.1 bits (23), Expect = 0.55 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1503 gtgagaccacaagaaagatctat 1525 ||||||||||||||||||||||| Sbjct: 40125 gtgagaccacaagaaagatctat 40147
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.55 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1503 gtgagaccacaagaaagatctat 1525 ||||||||||||||||||||||| Sbjct: 25099635 gtgagaccacaagaaagatctat 25099657
>emb|AL627427.11| Human DNA sequence from clone RP11-350G11 on chromosome 13, complete sequence Length = 102564 Score = 46.1 bits (23), Expect = 0.55 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1514 agaaagatctatgattctcagattggt 1540 ||||||||||||||||||||| ||||| Sbjct: 52681 agaaagatctatgattctcaggttggt 52655
>dbj|AK113975.1| Ciona intestinalis cDNA, clone:cicl019l23, full insert sequence Length = 2142 Score = 46.1 bits (23), Expect = 0.55 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1103 tctccacatccaaaggattttcctgatgagctgct 1137 ||||| |||||||| ||||||||||||||| |||| Sbjct: 1225 tctccgcatccaaaagattttcctgatgaggtgct 1259
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 46.1 bits (23), Expect = 0.55 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 tgaaacgtacgggtgtcagatgaatgt 333 ||||||||||||||| ||||||||||| Sbjct: 819532 tgaaacgtacgggtgccagatgaatgt 819506
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1856 gaattagttaagcctgcataatgttt 1881 |||||||||||||||| ||||||||| Sbjct: 19808488 gaattagttaagcctgaataatgttt 19808513
>gb|AC154052.1| Drosophila melanogaster clone BACR01B21, complete sequence Length = 167163 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1856 gaattagttaagcctgcataatgttt 1881 |||||||||||||||| ||||||||| Sbjct: 70273 gaattagttaagcctgaataatgttt 70248
>emb|AL032630.2|CEY62H9A Caenorhabditis elegans YAC Y62H9A, complete sequence Length = 47397 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2088 ttgacatttttcatataattgtttttgcttactg 2121 |||||||||||| || ||||||||||||| |||| Sbjct: 43758 ttgacatttttcttaaaattgtttttgctaactg 43725
>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 Length = 272698 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2088 ttgacatttttcatataattgttttt 2113 |||||||||||||||||||| ||||| Sbjct: 217155 ttgacatttttcatataattcttttt 217130
>gb|AC097500.3| Homo sapiens BAC clone RP11-335G13 from 2, complete sequence Length = 180215 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 910 agtaatgcttcttggtcagaat 931 |||||||||||||||||||||| Sbjct: 167239 agtaatgcttcttggtcagaat 167218
>ref|NM_001017192.2| Xenopus tropicalis hypothetical protein LOC549946 (LOC549946), mRNA emb|CR760597.2| Xenopus tropicalis finished cDNA, clone TEgg054g12 Length = 2111 Score = 44.1 bits (22), Expect = 2.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1298 agcagtgatttcataagtggcttctgtgaagagacaga 1335 |||||||||||||| | ||| |||||||| |||||||| Sbjct: 1404 agcagtgatttcattactggtttctgtgaggagacaga 1441
>ref|NM_025876.2| Mus musculus CDK5 regulatory subunit associated protein 1 (Cdk5rap1), mRNA Length = 1970 Score = 42.1 bits (21), Expect = 8.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1100 acctctccacatccaaaggattttcctgatgag 1132 |||||||| || || |||||||||||||||||| Sbjct: 1130 acctctcctcaccccaaggattttcctgatgag 1162
>ref|XM_001129312.1| PREDICTED: Homo sapiens hypothetical protein LOC729098 (LOC729098), mRNA Length = 585 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 ccggctcccggccccgcccca 198 ||||||||||||||||||||| Sbjct: 363 ccggctcccggccccgcccca 383
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 ccgacccacggcgccggctcccggc 189 ||||||| ||||||||||||||||| Sbjct: 7326936 ccgacccccggcgccggctcccggc 7326960
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 42.1 bits (21), Expect = 8.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2088 ttgacatttttcatataattgtttttgct 2116 |||| ||||||||||||||| |||||||| Sbjct: 1860172 ttgagatttttcatataattttttttgct 1860144
>gb|AC167559.2| Echinops telfairi, clone Echinops telfairi -24239157I1, complete sequence Length = 35266 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2090 gacatttttcatataattgtt 2110 ||||||||||||||||||||| Sbjct: 26869 gacatttttcatataattgtt 26889
>gb|AC150855.6| Bos taurus BAC CH240-472P12 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 168955 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1592 gagctgtttggtaaaactgac 1612 ||||||||||||||||||||| Sbjct: 57509 gagctgtttggtaaaactgac 57489
>gb|BC025132.1| Mus musculus CDK5 regulatory subunit associated protein 1, mRNA (cDNA clone MGC:35699 IMAGE:3666341), complete cds Length = 1951 Score = 42.1 bits (21), Expect = 8.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1100 acctctccacatccaaaggattttcctgatgag 1132 |||||||| || || |||||||||||||||||| Sbjct: 1095 acctctcctcaccccaaggattttcctgatgag 1127
>gb|AC145905.4| Pan troglodytes BAC clone RP43-9I21 from 7, complete sequence Length = 187893 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1469 cagaggagacttgcagaactg 1489 ||||||||||||||||||||| Sbjct: 175436 cagaggagacttgcagaactg 175456
>gb|AC160335.6| Mus musculus BAC clone RP23-38N19 from chromosome 15, complete sequence Length = 212090 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2093 atttttcatataattgtttttgctt 2117 |||||||||||| |||||||||||| Sbjct: 83306 atttttcatatagttgtttttgctt 83330
>gb|AC146159.2| Pan troglodytes BAC clone RP43-36O19 from 7, complete sequence Length = 163991 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1469 cagaggagacttgcagaactg 1489 ||||||||||||||||||||| Sbjct: 121557 cagaggagacttgcagaactg 121577
>gb|AC113263.19| Mus musculus strain 129S6/SvEvTac clone rp22-365j8 map 10, complete sequence Length = 123833 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2002 agctgaaatccaaagaatttt 2022 ||||||||||||||||||||| Sbjct: 31555 agctgaaatccaaagaatttt 31535
>gb|AC004799.2| Homo sapiens chromosome 19, cosmid R33516, complete sequence Length = 36229 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 ccggctcccggccccgcccca 198 ||||||||||||||||||||| Sbjct: 2747 ccggctcccggccccgcccca 2727
>gb|AY266303.2| Bacteriophage Aeh1, complete genome Length = 233234 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1132 gctgctatatttgatgcggga 1152 ||||||||||||||||||||| Sbjct: 224595 gctgctatatttgatgcggga 224615
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2094 tttttcatataattgtttttgctta 2118 |||||||| |||||||||||||||| Sbjct: 1242006 tttttcatttaattgtttttgctta 1241982
>gb|AC158592.4| Mus musculus 10 BAC RP23-198D4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196286 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2002 agctgaaatccaaagaatttt 2022 ||||||||||||||||||||| Sbjct: 112263 agctgaaatccaaagaatttt 112283
>dbj|AK132982.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930542I17 product:unclassifiable, full insert sequence Length = 2311 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 938 agttataatgatacttctgaa 958 ||||||||||||||||||||| Sbjct: 2082 agttataatgatacttctgaa 2102
>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence Length = 207799 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1438 ttatgaggatgatgtccccaa 1458 ||||||||||||||||||||| Sbjct: 51494 ttatgaggatgatgtccccaa 51514
>dbj|AK163289.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020010C21 product:unclassifiable, full insert sequence Length = 4167 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2093 atttttcatataattgtttttgctt 2117 |||||||||||| |||||||||||| Sbjct: 3895 atttttcatatagttgtttttgctt 3871
>gb|AC089982.15| Homo sapiens 12 BAC RP11-25I15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173877 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 657 ctaggctgctgcaagaagtgg 677 ||||||||||||||||||||| Sbjct: 85883 ctaggctgctgcaagaagtgg 85863
>dbj|AK088517.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430019F04 product:CDK5 regulatory subunit associated protein 1, full insert sequence Length = 1985 Score = 42.1 bits (21), Expect = 8.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1100 acctctccacatccaaaggattttcctgatgag 1132 |||||||| || || |||||||||||||||||| Sbjct: 1139 acctctcctcaccccaaggattttcctgatgag 1171
>dbj|AK010097.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310067M10 product:CDK5 ACTIVATOR-BINDING PROTEIN homolog [Rattus norvegicus], full insert sequence Length = 1970 Score = 42.1 bits (21), Expect = 8.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1100 acctctccacatccaaaggattttcctgatgag 1132 |||||||| || || |||||||||||||||||| Sbjct: 1130 acctctcctcaccccaaggattttcctgatgag 1162
>dbj|AK010081.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310066P17 product:CDK5 ACTIVATOR-BINDING PROTEIN homolog [Rattus norvegicus], full insert sequence Length = 1970 Score = 42.1 bits (21), Expect = 8.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1100 acctctccacatccaaaggattttcctgatgag 1132 |||||||| || || |||||||||||||||||| Sbjct: 1130 acctctcctcaccccaaggattttcctgatgag 1162
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 8.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1097 tttacctctccacatccaaaggattttcc 1125 ||||| ||||| ||||||||||||||||| Sbjct: 1108226 tttacttctccccatccaaaggattttcc 1108254
>gb|AC007236.5| Arabidopsis thaliana chromosome 2 clone T3D7 map mi79a, complete sequence Length = 16031 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2092 catttttcatataattgtttt 2112 ||||||||||||||||||||| Sbjct: 9654 catttttcatataattgtttt 9674
>gb|AC091885.2| Homo sapiens chromosome 5 clone RP11-116O11, complete sequence Length = 167297 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1901 tgggagcatatcatccaattt 1921 ||||||||||||||||||||| Sbjct: 24161 tgggagcatatcatccaattt 24141
>emb|AL589877.13| Human DNA sequence from clone RP11-236M5 on chromosome X Contains a suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) (ST13) pseudogene, complete sequence Length = 119032 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 agccccagacagattcagagt 269 ||||||||||||||||||||| Sbjct: 110006 agccccagacagattcagagt 110026
>emb|AL391663.13| Human DNA sequence from clone RP1-54A3 on chromosome 6 Contains a novel gene, complete sequence Length = 20346 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1403 tatagcatgagagagaaaacc 1423 ||||||||||||||||||||| Sbjct: 706 tatagcatgagagagaaaacc 726
>gb|AC160415.4| Mus musculus 10 BAC RP24-410I24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 144561 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 914 atgcttcttggtcagaatgta 934 ||||||||||||||||||||| Sbjct: 67431 atgcttcttggtcagaatgta 67451
>emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M2 on chromosome 6q25.1-26 Contains the 3' end of the gene for KIAA1116 and a ribosomal protein L17 (60S ribosomal protein L17) (RPL17)(rpL17) pseudogene, complete sequence Length = 107506 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2156 atacactgattatatgtgcat 2176 ||||||||||||||||||||| Sbjct: 67623 atacactgattatatgtgcat 67603
>gb|AC159478.7| Mus musculus 10 BAC RP23-460F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174480 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2002 agctgaaatccaaagaatttt 2022 ||||||||||||||||||||| Sbjct: 164966 agctgaaatccaaagaatttt 164946
>gb|AC129935.8| Mus musculus chromosome 15, clone RP23-269P8, complete sequence Length = 183894 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 938 agttataatgatacttctgaa 958 ||||||||||||||||||||| Sbjct: 122075 agttataatgatacttctgaa 122095
>gb|AC125455.3| Mus musculus BAC clone RP24-170L2 from chromosome 15, complete sequence Length = 145059 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2093 atttttcatataattgtttttgctt 2117 |||||||||||| |||||||||||| Sbjct: 17596 atttttcatatagttgtttttgctt 17572
>gb|AC068614.5| Homo sapiens BAC clone RP11-512N1 from 2, complete sequence Length = 164706 Score = 42.1 bits (21), Expect = 8.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2059 tttttctttagagggaagtagttgt 2083 ||||| ||||||||||||||||||| Sbjct: 60559 tttttttttagagggaagtagttgt 60535
>gb|AC008080.1|AC008080 Homo sapiens clone RP11-89N17 from 7p14-15, complete sequence Length = 178635 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1469 cagaggagacttgcagaactg 1489 ||||||||||||||||||||| Sbjct: 125062 cagaggagacttgcagaactg 125082
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 8.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1097 tttacctctccacatccaaaggattttcc 1125 ||||| ||||| ||||||||||||||||| Sbjct: 3117186 tttacttctccccatccaaaggattttcc 3117158
>emb|AL732601.16| Mouse DNA sequence from clone RP23-154J12 on chromosome 2, complete sequence Length = 192345 Score = 42.1 bits (21), Expect = 8.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1100 acctctccacatccaaaggattttcctgatgag 1132 |||||||| || || |||||||||||||||||| Sbjct: 173857 acctctcctcaccccaaggattttcctgatgag 173825
>gb|AC153563.3| Mus musculus 10 BAC RP23-455D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 171018 Score = 42.1 bits (21), Expect = 8.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2162 tgattatatgtgcatgcttat 2182 ||||||||||||||||||||| Sbjct: 54576 tgattatatgtgcatgcttat 54556 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 391,197,379 Number of extensions: 20737039 Number of successful extensions: 105143 Number of sequences better than 10.0: 78 Number of HSP's gapped: 105124 Number of HSP's successfully gapped: 114 Length of query: 2236 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2213 Effective length of database: 18,503,978,556 Effective search space: 40949304544428 Effective search space used: 40949304544428 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
