ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64j23 |
|---|---|
| Clone Library Name | barley_pub |
>Q5ZMV2:SAS6_CHICK Spindle assembly abnormal protein 6 homolog - Gallus gallus| (Chicken) Length = 640 Score = 35.0 bits (79), Expect = 0.54 Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 2/162 (1%) Frame = +2 Query: 152 QLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAKEARDKVYHILGSAQDMIMEAEADK 331 Q K E +H++ +Q+ Q +E + KD E R K + + + E + Sbjct: 239 QQKKELESLHQRSIQQLQN----RLSELEVINKDLTERRYKGDSTVRELKAKLSGVEDEC 294 Query: 332 DATKQDIAKDVHGYCT--KAIGTSLKFIRSYNTRLTYLDKVKTHSDDLIKQLKCLDPATQ 505 KQ++ T KFI TR+ L++ D L+ + K + ATQ Sbjct: 295 QRAKQEVVSLRRENTTLDAECHEKEKFINQLQTRVAVLEQEIKDKDQLVIRTKEVLDATQ 354 Query: 506 QKEAQCLALEAGRYKKAALEDAEKFEHFIPNQFSEWLKGNKI 631 + Q + LE KK + EK E I + +E LK N+I Sbjct: 355 E---QKVILEENTEKKQS--HIEKLETTIKSLSAELLKANEI 391
>Q6D447:MUKB_ERWCT Chromosome partition protein mukB - Erwinia carotovora subsp.| atroseptica (Pectobacterium atrosepticum) Length = 1479 Score = 34.3 bits (77), Expect = 0.92 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 1/126 (0%) Frame = +2 Query: 167 AELIHRQEVQKFQELKFQSYAEQQKYLKDAKEAR-DKVYHILGSAQDMIMEAEADKDATK 343 AE +E + + + Y++ Q LK + +A+ D + +L QD+ + A+AD +A Sbjct: 998 AERTKAREQLRQHQTQLTQYSQVQASLKSSYDAKQDMLKELLQELQDIGVRADADAEARA 1057 Query: 344 QDIAKDVHGYCTKAIGTSLKFIRSYNTRLTYLDKVKTHSDDLIKQLKCLDPATQQKEAQC 523 + ++H A+ T+ ++T+ + D + K+L+ L+ Q Q Sbjct: 1058 RQRRDELHA----ALSTNRSRRNQLEKQITFCE---AEMDSVQKKLRKLERDYHQMREQV 1110 Query: 524 LALEAG 541 + +AG Sbjct: 1111 VTAKAG 1116
>Q6MFZ5:TRI39_RAT Tripartite motif-containing protein 39 - Rattus norvegicus (Rat)| Length = 488 Score = 33.9 bits (76), Expect = 1.2 Identities = 30/118 (25%), Positives = 53/118 (44%) Frame = +2 Query: 101 KPEDYTMPQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAKEARDKVY 280 K ++ T + + PG+L +L E +Q +++F+EL + EQQ L +E + Sbjct: 164 KLQEITCCKASEERKPGELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDIL 223 Query: 281 HILGSAQDMIMEAEADKDATKQDIAKDVHGYCTKAIGTSLKFIRSYNTRLTYLDKVKT 454 L + D+ +A +V G C ++ LK ++S L +KVKT Sbjct: 224 QRLRENAAHL----GDRRRDLAHLAAEVEGKCLQSGFEMLKDVKS---TLEKCEKVKT 274
>Q9ESN2:TRI39_MOUSE Tripartite motif-containing protein 39 - Mus musculus (Mouse)| Length = 488 Score = 33.9 bits (76), Expect = 1.2 Identities = 30/118 (25%), Positives = 53/118 (44%) Frame = +2 Query: 101 KPEDYTMPQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAKEARDKVY 280 K ++ T + + PG+L +L E +Q +++F+EL + EQQ L +E + Sbjct: 164 KLQEITCCKASEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDIL 223 Query: 281 HILGSAQDMIMEAEADKDATKQDIAKDVHGYCTKAIGTSLKFIRSYNTRLTYLDKVKT 454 L + D+ +A +V G C ++ LK ++S L +KVKT Sbjct: 224 QRLRENAAHL----GDRRRDLAHLAAEVEGKCLQSGFEMLKDVKS---TLEKCEKVKT 274
>O95347:SMC2_HUMAN Structural maintenance of chromosomes protein 2 - Homo sapiens| (Human) Length = 1197 Score = 33.9 bits (76), Expect = 1.2 Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 8/169 (4%) Frame = +2 Query: 161 KLAELIHRQEVQKFQELKFQSYAEQQKYLKDAKEARDKVYHILGSAQDMIMEAEADKDAT 340 KL + + ++ ++ LK ++ E ++ LK+ KE + K ++ + AEA+++ Sbjct: 732 KLQQSSYHKQQEELDALK-KTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAEAERERE 790 Query: 341 KQDIAKDVHGYCTKAIGTSLKF---IRSYNTRLTYLDKVKTHSDDLIKQLKCLDPATQQK 511 +D K + TKA +S K + L+++K +QL+ ++ A + Sbjct: 791 LKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSY 850 Query: 512 EAQ--CLALEAGRYKKA---ALEDAEKFEHFIPNQFSEWLKGNKIKFQD 643 E+Q +A E + K++ A E+ K + I Q +K N K+Q+ Sbjct: 851 ESQIEVMAAEVAKNKESVNKAQEEVTKQKEVITAQ-DTVIKLNMQKWQN 898
>Q86UP3:ZFHX4_HUMAN Zinc finger homeobox protein 4 - Homo sapiens (Human)| Length = 3567 Score = 33.5 bits (75), Expect = 1.6 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = +2 Query: 80 VVAVENLKPEDYTMPQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAK 259 V +E+L P TMPQ L LSPG L Q+ Q++Q+ +S +QQK ++ + Sbjct: 3241 VCGMESLFPYGPTMPQTLAGLSPGAL--------LQQYQQYQQNLQESLQKQQKQQQEQQ 3292 Query: 260 E 262 + Sbjct: 3293 Q 3293
>Q8CG48:SMC2_MOUSE Structural maintenance of chromosomes protein 2 - Mus musculus| (Mouse) Length = 1191 Score = 33.5 bits (75), Expect = 1.6 Identities = 48/243 (19%), Positives = 99/243 (40%), Gaps = 6/243 (2%) Frame = +2 Query: 29 QEAIPPRSNPFACAMDTVVAVENLKPEDYTMPQQL-VDLSPGQL--HKLAELIHRQEVQK 199 Q+ + + N + + ++N+ + + QQ + G L KL + + ++ ++ Sbjct: 685 QDELRTKENELRALEEELAGLKNVAEKYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQEE 744 Query: 200 FQELKFQSYAEQQKYLKDAKEARDKVYHILGSAQDMIMEAEADKDATKQDIAKDVHGYCT 379 LK ++ E ++ LK KE + K + ++ + AEA+++ +D K + T Sbjct: 745 LDALK-KTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAEREKELKDAQKKLDCAKT 803 Query: 380 KAIGTSLKF---IRSYNTRLTYLDKVKTHSDDLIKQLKCLDPATQQKEAQCLALEAGRYK 550 KA +S K + L+++K +QL ++ A + E G+ + Sbjct: 804 KADASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAIKAYE--------GQIE 855 Query: 551 KAALEDAEKFEHFIPNQFSEWLKGNKIKFQDLVADDTAKPGLRGAFKTLDDTQKLKAYDN 730 K A E A+ E Q + I QD + D + + + K+K D+ Sbjct: 856 KMAAEVAKNKESVNKAQDELMKQKQIITAQDNIIKDKCAEVAKHNLQNNESQLKIKELDH 915 Query: 731 IIA 739 I+ Sbjct: 916 SIS 918
>Q6PDY2:CJ022_MOUSE Uncharacterized protein C10orf22 homolog - Mus musculus (Mouse)| Length = 256 Score = 33.1 bits (74), Expect = 2.1 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Frame = +2 Query: 668 PGLRGAFKTLDDTQKLKAYDNIIAGSGHGNPMVTYSFE----DLGKVEIDSGT--SKVNI 829 PG+ G K L T ++ D + G+GH P FE L + + G S+ Sbjct: 103 PGMHGMLKVLYGTVRISCMDKLDTGAGHRRPPPEQQFEPPLQPLEREAVRPGVLRSRAEY 162 Query: 830 TDGLSGCRVAPMTDGL 877 T+ C + P D L Sbjct: 163 TEASGPCVLTPHRDNL 178
>Q1XHU0:TRI39_PANTR Tripartite motif-containing protein 39 - Pan troglodytes| (Chimpanzee) Length = 518 Score = 32.7 bits (73), Expect = 2.7 Identities = 26/105 (24%), Positives = 47/105 (44%) Frame = +2 Query: 101 KPEDYTMPQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAKEARDKVY 280 K ++ T + + PG+L +L E +Q +++F+EL + EQQ L +E + Sbjct: 164 KLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDIL 223 Query: 281 HILGSAQDMIMEAEADKDATKQDIAKDVHGYCTKAIGTSLKFIRS 415 L + DK +A +V G C ++ LK ++S Sbjct: 224 QRLRENAAHL----GDKRRDLAHLAAEVEGKCLQSGFEMLKDVKS 264
>Q9HCM9:TRI39_HUMAN Tripartite motif-containing protein 39 - Homo sapiens (Human)| Length = 518 Score = 32.7 bits (73), Expect = 2.7 Identities = 26/105 (24%), Positives = 47/105 (44%) Frame = +2 Query: 101 KPEDYTMPQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAKEARDKVY 280 K ++ T + + PG+L +L E +Q +++F+EL + EQQ L +E + Sbjct: 164 KLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDIL 223 Query: 281 HILGSAQDMIMEAEADKDATKQDIAKDVHGYCTKAIGTSLKFIRS 415 L + DK +A +V G C ++ LK ++S Sbjct: 224 QRLRENAAHL----GDKRRDLAHLAAEVEGKCLQSGFEMLKDVKS 264
>P44678:TOLA_HAEIN Protein tolA - Haemophilus influenzae| Length = 372 Score = 32.3 bits (72), Expect = 3.5 Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = +2 Query: 122 PQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAKE-ARDKVYHILGSA 298 P+ +V+ P + ++ E+ H+QEVQ+ +ELK Q ++Q+ +K +E AR + A Sbjct: 80 PEPVVEEKPPEPNQ-EEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQEALEKQKQA 138 Query: 299 QDMIMEAEADKDATKQD 349 ++ + A+ K D Sbjct: 139 EEAKAKQAAEAAKLKAD 155
>P03186:TEGU_EBV Large tegument protein - Epstein-Barr virus (strain B95-8) (HHV-4)| (Human herpesvirus 4) Length = 3149 Score = 32.3 bits (72), Expect = 3.5 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +2 Query: 428 LTYLDKVKTHSDDLIKQLKCLDPATQQKEAQCLALEAGRYKKAALEDAEKFEHFIPNQ 601 L+YL K+K +++D ++Q KE Q LEA +K A E E F PN+ Sbjct: 1348 LSYLQKLKNNNNDQLRQ----------KEVQAWRLEAEGFKPATEEQLEAFLDTAPNK 1395
>Q6FPH2:GRPE_CANGA GrpE protein homolog, mitochondrial precursor - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 231 Score = 32.0 bits (71), Expect = 4.6 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = +2 Query: 125 QQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAKEARDKVYHILGSAQD 304 ++ +L L +A+ + QEV K K +SYA QK+ KD E+ D H LG+ ++ Sbjct: 84 KEAAELKDRLLRSVADFRNLQEVTKKDVEKAKSYA-LQKFAKDLLESVDNFGHALGAFKE 142 Query: 305 MIME 316 +E Sbjct: 143 EDLE 146
>Q9JJN2:ZFHX4_MOUSE Zinc finger homeobox protein 4 - Mus musculus (Mouse)| Length = 3550 Score = 31.6 bits (70), Expect = 6.0 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%) Frame = +2 Query: 80 VVAVENLKPEDYTMPQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYL--KD 253 + VE+L P +PQ L LSPG L + + + Q+ + Q +QQK + K Sbjct: 3224 ICGVESLFPYGPAVPQTLAGLSPGALLQQYQQYQQSLQDSLQKQQKQQQEQQQKPVPAKT 3283 Query: 254 AKEARDKVYHILGSAQDMIMEAEADKDATKQDIAKD 361 AK D+ A + E ++TK+++ D Sbjct: 3284 AKGEGDQP-QSSNEASETKEEKSTAPESTKEEVQLD 3318
>O73590:ZFHX4_CHICK Zinc finger homeobox protein 4 - Gallus gallus (Chicken)| Length = 3573 Score = 31.6 bits (70), Expect = 6.0 Identities = 24/90 (26%), Positives = 43/90 (47%) Frame = +2 Query: 80 VVAVENLKPEDYTMPQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYLKDAK 259 V +E+L P +PQ + LSPG L Q+ Q++Q+ S +QQK + + Sbjct: 3247 VCGMESLFPYGPAVPQTIAGLSPGAL--------LQQYQQYQQNLQDSLQKQQK--QQQE 3296 Query: 260 EARDKVYHILGSAQDMIMEAEADKDATKQD 349 + + +V A++ + +D TK+D Sbjct: 3297 QQQKQVQAKSSKAENDQQQNSSDTSETKED 3326
>P39967:UBP9_YEAST Ubiquitin carboxyl-terminal hydrolase 9 - Saccharomyces cerevisiae| (Baker's yeast) Length = 754 Score = 31.6 bits (70), Expect = 6.0 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = +2 Query: 563 EDAEKFEHFIPNQFSEWLKGN--KIKFQDLVADDTAKPGLRGAFK-TLDDTQKLKAYDNI 733 +DA +F +F+ N FSE+++ N +++F D++ + FK TL + K DNI Sbjct: 434 QDAHEFLNFLLNDFSEYIQRNNPRMRFGPQKTDNSNDNFITDLFKGTLTNRIKCLTCDNI 493 Query: 734 IAGSGHGNPMVTYSFEDLGKVEID 805 + P + + E G E D Sbjct: 494 ---TSRDEPFLDFPIEVQGDEETD 514
>P53064:RTF1_YEAST RNA polymerase-associated protein RTF1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 558 Score = 31.6 bits (70), Expect = 6.0 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 7/95 (7%) Frame = +2 Query: 71 MDTVVAVENLKPEDYTMPQQLVDLSPGQLHKLAELIHRQEVQKFQELKFQSYAEQQKYL- 247 M + E++K ED D P K ++ QE+QK + K + A+Q+K Sbjct: 463 MSNIRNAEHVKKEDSNNFDSKSD--PFSRLKTRTKVYYQEIQKEENAKAKEIAQQEKLQE 520 Query: 248 -KDAKEARDK-----VYHILGSAQDMIMEAEADKD 334 KDAK+ R+K + LG + M+ E + D Sbjct: 521 DKDAKDKREKELLVAQFRRLGGLERMVGELDIKFD 555
>Q8PGR7:PUR4_XANAC Phosphoribosylformylglycinamidine synthase - Xanthomonas axonopodis| pv. citri Length = 1348 Score = 31.2 bits (69), Expect = 7.8 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 650 ADDTAKPGLRGAFKTLDDTQKLKAYDNIIAGSGHGNPMVTY 772 ADDTA P G LDD Q+L+++ +I + ++ Y Sbjct: 899 ADDTALPAFGGEVPDLDDAQRLRSFFELIRDARDSGLLLAY 939
>Q03751:CSP_DROME Cysteine string protein - Drosophila melanogaster (Fruit fly)| Length = 249 Score = 25.0 bits (53), Expect(2) = 8.9 Identities = 10/34 (29%), Positives = 14/34 (41%) Frame = +3 Query: 879 NSLALLRTTTQTYELIIPECYYSTTAAIFCCCCC 980 N A T+ + ++ C T CCCCC Sbjct: 96 NVNAYFVVTSPAVKAVVICCAVITGCCCCCCCCC 129 Score = 24.6 bits (52), Expect(2) = 8.9 Identities = 6/7 (85%), Positives = 7/7 (100%) Frame = +3 Query: 966 CCCCCHF 986 CCCCC+F Sbjct: 127 CCCCCNF 133 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 183,189,211 Number of extensions: 3885628 Number of successful extensions: 11027 Number of sequences better than 10.0: 19 Number of HSP's gapped: 11008 Number of HSP's successfully gapped: 20 Length of query: 361 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 247 Effective length of database: 69,416,809 Effective search space: 17145951823 Effective search space used: 17145951823 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
