ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf64j13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK103616:Os01g0656900 124 1e-28
2AK073330:Os01g0221300 76 4e-14
3AK102723:Os03g0740700 32 0.93
4Os08g0468700:Os08g0468700 31 2.1
5AK070433:Os03g0748400 31 2.1

>AK103616:Os01g0656900 |
          Length = 777
 Score =  124 bits (312), Expect = 1e-28
 Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 20/185 (10%)
 Frame = +1

Query: 622  APLVGSSNKCGTKVIGAEKHSPLLRPCEERMITR---DVVPFE-----PCNGNSMYVQVK 777
            +P + S+   G ++    K++ L  P  ++ +        P +     P +G S+ +Q K
Sbjct: 593  SPSILSNYSTGEQIHSVSKNAELCSPTAKKALFEPGSSCTPLKHTVCPPSSGKSISIQAK 652

Query: 778  REAGSLPSTITSKWESEGHLCSSVCNHVEIAMQALCALYRQRKLAMEDAREEH------- 936
             E   LPS ++  WE+  H+ +S+  ++E++MQALCALYRQRKL +     +        
Sbjct: 653  GEINLLPSAMSRHWETAAHMIASLRGNMELSMQALCALYRQRKLVIMSTEGQQTGTTGLT 712

Query: 937  -----RAHTLAEFLLDGDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKE 1101
                 RA  L EFLLDG L+GP+++T  EL++HD T P FL +V +S S +L+ I++NK+
Sbjct: 713  KIDAVRAIRLLEFLLDGKLKGPLKRTAKELLSHDATGPTFLEKVALSFSKELFDIYKNKK 772

Query: 1102 DPYFC 1116
            DPYFC
Sbjct: 773  DPYFC 777



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +1

Query: 550 QGSFDGVPSSGVSQLLKGDAKMNQAPLVGSSNKCGTKVIGA--EKHSPLLRPCEERMITR 723
           + S  G    GVSQ  KG+ +MN+  +V SS+KCG + +GA  +K SPL R  EE  + R
Sbjct: 446 KNSEKGNSEKGVSQPPKGNDQMNKMSMVESSSKCGYEKVGADVQKCSPLPRQSEEGSVAR 505

Query: 724 DVVPFE 741
            VV FE
Sbjct: 506 GVVSFE 511



 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 32/87 (36%), Positives = 40/87 (45%)
 Frame = +1

Query: 298 GNDQQKSSSVKMEGQMTRTGKMTCIPEASKAAASVQESGVVKSEKFDDEMPRTVLLPSRG 477
           GND  K +S + +     TG+M   P  S  AA VQ  G V+ E    EMPR V+L S  
Sbjct: 199 GNDPPKCTSARTDVPEASTGEMVSRPGDSMVAAFVQGKGTVQPENVGGEMPR-VMLHSPA 257

Query: 478 LLSTSPLQKASSKSDYCKAGIGEKQGS 558
            +  S LQK            G+K GS
Sbjct: 258 QVIRSTLQKRK---------FGKKDGS 275



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>AK073330:Os01g0221300 |
          Length = 494

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 13/113 (11%)
 Frame = +1

Query: 814  KWESEGHLCSSVCNHVEIAMQALCALYRQRKLAMEDAR-------------EEHRAHTLA 954
            +W+ E  + S+   H E+ ++A+CALYR++    ++ +             +  R  ++A
Sbjct: 380  EWKYEAEMLSAFAAHPELCLKAVCALYRKQTKDEQEVKATILHNKQGFNQIDAARGSSIA 439

Query: 955  EFLLDGDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKEDPYF 1113
            EFLLDGD  GP++KTV +L  +D     F  ++    S QL+ I++NKEDPYF
Sbjct: 440  EFLLDGDTFGPLKKTVHDLEQYDRYALEFCHKLAARYSKQLFSIYQNKEDPYF 492



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>AK102723:Os03g0740700 |
          Length = 759

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 21/69 (30%), Positives = 25/69 (36%)
 Frame = +1

Query: 769 QVKREAGSLPSTITSKWESEGHLCSSVCNHVEIAMQALCALYRQRKLAMEDAREEHRAHT 948
           Q  RE   L   +  +W S GHL +SV         A     R RK     + EEH    
Sbjct: 246 QAAREGKQLEEVVGERWGSLGHLAASVSASRAAPSHAHLHAIRGRKAGQAGSSEEHSKEN 305

Query: 949 LAEFLLDGD 975
             E    GD
Sbjct: 306 PKEGQQGGD 314



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>Os08g0468700:Os08g0468700 |
          Length = 916

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
 Frame = +1

Query: 970  GDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKEDPY------FC*QQRS 1131
            G ++ PMR TV ELVN     P   + VT++CSG      R KE         F     +
Sbjct: 164  GLVKRPMRLTVDELVN---GFPAVEVPVTLACSGN-----RRKEQNMVQQTVGFNFGAAA 215

Query: 1132 SKYSMWVGCRLRSLYR 1179
               S+W G RLR + R
Sbjct: 216  VSTSVWHGARLRDVLR 231



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>AK070433:Os03g0748400 |
          Length = 409

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
 Frame = +1

Query: 313 KSSSVKMEGQMTRTGKMTCIPEASKAAASVQE-SGVVKSEKFDDEMPRTVLLPSRGLLST 489
           K+ +  + G +TR  K     +A +AAA+  E SG V S + D           RG LST
Sbjct: 233 KAHAPSVNGGLTRNQKKKIRRKAKRAAAATSEGSGTVASGETDGS-------DDRGNLST 285

Query: 490 SPLQKASSKSDYCKAGIGEKQGSFDGVPSSGVSQLLKGDAKMNQAPLVGSSNKCGT 657
           +     +   D  + G G ++GS      +     L+ D K     LV   N C T
Sbjct: 286 ANEGSPNQDGDKKEEGEGSRRGS----KGTRKKMALEADLK---CKLVDFGNACWT 334


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.317    0.131    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 35,024,467
Number of extensions: 813602
Number of successful extensions: 2368
Number of sequences better than 10.0: 5
Number of HSP's gapped: 2361
Number of HSP's successfully gapped: 7
Length of query: 412
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 309
Effective length of database: 11,275,632
Effective search space: 3484170288
Effective search space used: 3484170288
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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