| Clone Name | FLbaf64j13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103616:Os01g0656900 | 124 | 1e-28 | 2 | AK073330:Os01g0221300 | 76 | 4e-14 | 3 | AK102723:Os03g0740700 | 32 | 0.93 | 4 | Os08g0468700:Os08g0468700 | 31 | 2.1 | 5 | AK070433:Os03g0748400 | 31 | 2.1 |
|---|
>AK103616:Os01g0656900 | Length = 777 Score = 124 bits (312), Expect = 1e-28 Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 20/185 (10%) Frame = +1 Query: 622 APLVGSSNKCGTKVIGAEKHSPLLRPCEERMITR---DVVPFE-----PCNGNSMYVQVK 777 +P + S+ G ++ K++ L P ++ + P + P +G S+ +Q K Sbjct: 593 SPSILSNYSTGEQIHSVSKNAELCSPTAKKALFEPGSSCTPLKHTVCPPSSGKSISIQAK 652 Query: 778 REAGSLPSTITSKWESEGHLCSSVCNHVEIAMQALCALYRQRKLAMEDAREEH------- 936 E LPS ++ WE+ H+ +S+ ++E++MQALCALYRQRKL + + Sbjct: 653 GEINLLPSAMSRHWETAAHMIASLRGNMELSMQALCALYRQRKLVIMSTEGQQTGTTGLT 712 Query: 937 -----RAHTLAEFLLDGDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKE 1101 RA L EFLLDG L+GP+++T EL++HD T P FL +V +S S +L+ I++NK+ Sbjct: 713 KIDAVRAIRLLEFLLDGKLKGPLKRTAKELLSHDATGPTFLEKVALSFSKELFDIYKNKK 772 Query: 1102 DPYFC 1116 DPYFC Sbjct: 773 DPYFC 777 Score = 50.1 bits (118), Expect = 3e-06 Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Frame = +1 Query: 550 QGSFDGVPSSGVSQLLKGDAKMNQAPLVGSSNKCGTKVIGA--EKHSPLLRPCEERMITR 723 + S G GVSQ KG+ +MN+ +V SS+KCG + +GA +K SPL R EE + R Sbjct: 446 KNSEKGNSEKGVSQPPKGNDQMNKMSMVESSSKCGYEKVGADVQKCSPLPRQSEEGSVAR 505 Query: 724 DVVPFE 741 VV FE Sbjct: 506 GVVSFE 511 Score = 42.7 bits (99), Expect = 5e-04 Identities = 32/87 (36%), Positives = 40/87 (45%) Frame = +1 Query: 298 GNDQQKSSSVKMEGQMTRTGKMTCIPEASKAAASVQESGVVKSEKFDDEMPRTVLLPSRG 477 GND K +S + + TG+M P S AA VQ G V+ E EMPR V+L S Sbjct: 199 GNDPPKCTSARTDVPEASTGEMVSRPGDSMVAAFVQGKGTVQPENVGGEMPR-VMLHSPA 257 Query: 478 LLSTSPLQKASSKSDYCKAGIGEKQGS 558 + S LQK G+K GS Sbjct: 258 QVIRSTLQKRK---------FGKKDGS 275
>AK073330:Os01g0221300 | Length = 494 Score = 76.3 bits (186), Expect = 4e-14 Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 13/113 (11%) Frame = +1 Query: 814 KWESEGHLCSSVCNHVEIAMQALCALYRQRKLAMEDAR-------------EEHRAHTLA 954 +W+ E + S+ H E+ ++A+CALYR++ ++ + + R ++A Sbjct: 380 EWKYEAEMLSAFAAHPELCLKAVCALYRKQTKDEQEVKATILHNKQGFNQIDAARGSSIA 439 Query: 955 EFLLDGDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKEDPYF 1113 EFLLDGD GP++KTV +L +D F ++ S QL+ I++NKEDPYF Sbjct: 440 EFLLDGDTFGPLKKTVHDLEQYDRYALEFCHKLAARYSKQLFSIYQNKEDPYF 492
>AK102723:Os03g0740700 | Length = 759 Score = 32.0 bits (71), Expect = 0.93 Identities = 21/69 (30%), Positives = 25/69 (36%) Frame = +1 Query: 769 QVKREAGSLPSTITSKWESEGHLCSSVCNHVEIAMQALCALYRQRKLAMEDAREEHRAHT 948 Q RE L + +W S GHL +SV A R RK + EEH Sbjct: 246 QAAREGKQLEEVVGERWGSLGHLAASVSASRAAPSHAHLHAIRGRKAGQAGSSEEHSKEN 305 Query: 949 LAEFLLDGD 975 E GD Sbjct: 306 PKEGQQGGD 314
>Os08g0468700:Os08g0468700 | Length = 916 Score = 30.8 bits (68), Expect = 2.1 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 6/76 (7%) Frame = +1 Query: 970 GDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKEDPY------FC*QQRS 1131 G ++ PMR TV ELVN P + VT++CSG R KE F + Sbjct: 164 GLVKRPMRLTVDELVN---GFPAVEVPVTLACSGN-----RRKEQNMVQQTVGFNFGAAA 215 Query: 1132 SKYSMWVGCRLRSLYR 1179 S+W G RLR + R Sbjct: 216 VSTSVWHGARLRDVLR 231
>AK070433:Os03g0748400 | Length = 409 Score = 30.8 bits (68), Expect = 2.1 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 1/116 (0%) Frame = +1 Query: 313 KSSSVKMEGQMTRTGKMTCIPEASKAAASVQE-SGVVKSEKFDDEMPRTVLLPSRGLLST 489 K+ + + G +TR K +A +AAA+ E SG V S + D RG LST Sbjct: 233 KAHAPSVNGGLTRNQKKKIRRKAKRAAAATSEGSGTVASGETDGS-------DDRGNLST 285 Query: 490 SPLQKASSKSDYCKAGIGEKQGSFDGVPSSGVSQLLKGDAKMNQAPLVGSSNKCGT 657 + + D + G G ++GS + L+ D K LV N C T Sbjct: 286 ANEGSPNQDGDKKEEGEGSRRGS----KGTRKKMALEADLK---CKLVDFGNACWT 334 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.317 0.131 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 35,024,467 Number of extensions: 813602 Number of successful extensions: 2368 Number of sequences better than 10.0: 5 Number of HSP's gapped: 2361 Number of HSP's successfully gapped: 7 Length of query: 412 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 309 Effective length of database: 11,275,632 Effective search space: 3484170288 Effective search space used: 3484170288 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)