ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64j13 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g46840:12001.t04134:unspliced-genomic expressed protein| Length = 4613 Score = 93.0 bits (197), Expect(7) = 6e-51 Identities = 37/68 (54%), Positives = 51/68 (75%) Frame = +1 / +3 Query: 937 RAHTLAEFLLDGDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKEDPYFC 1116 RA L EFLLDG L+GP+++T EL++HD T P FL +V +S S +L+ I++NK+DPYFC Sbjct: 3933 RAIRLLEFLLDGKLKGPLKRTAKELLSHDATGPTFLEKVALSFSKELFDIYKNKKDPYFC 4112 Query: 1117 *QQRSSKY 1140 *QQ S + Sbjct: 4113 *QQGSDTW 4136 Score = 71.0 bits (149), Expect(7) = 6e-51 Identities = 27/58 (46%), Positives = 41/58 (70%) Frame = +1 / +3 Query: 742 PCNGNSMYVQVKREAGSLPSTITSKWESEGHLCSSVCNHVEIAMQALCALYRQRKLAM 915 P +G S+ +Q K E LPS ++ WE+ H+ +S+ ++E++MQALCALYRQRKL + Sbjct: 1974 PSSGKSISIQAKGEINLLPSAMSRHWETAAHMIASLRGNMELSMQALCALYRQRKLVI 2147 Score = 40.5 bits (82), Expect(7) = 6e-51 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = +3 / +2 Query: 285 GRYSGK*SAEIFVRKDGGADDKNREDDMYS*GFKGGSFRAG 407 GR+ G+*S E++ +DG + NR D + GF G SFRAG Sbjct: 635 GRFWGE*STEMYFCEDGCSGSINRGDGE*AWGFDGSSFRAG 757 Score = 40.4 bits (82), Expect(7) = 6e-51 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = +1 / +3 Query: 550 QGSFDGVPSSGVSQLLKGDAKMNQAPLVGSSNKCGTKVIGAE 675 + S G GVSQ KG+ +MN+ +V SS+KCG + +GA+ Sbjct: 1389 KNSEKGNSEKGVSQPPKGNDQMNKMSMVESSSKCGYEKVGAD 1514 Score = 31.3 bits (62), Expect(7) = 6e-51 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +3 / +2 Query: 195 AAEPALQASTASRAR*VGIGEGGWTGAKRF 284 AAEPAL+ ++A AR IGE W + RF Sbjct: 554 AAEPALEEASAR*ARGCEIGERRWAQSGRF 643 Score = 29.5 bits (58), Expect(7) = 6e-51 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +2 / +1 Query: 665 LVLKNIHLY*DHVKSG**QGM*FHL 739 L+ ++ HLY D VK *QG *FHL Sbjct: 1510 LMCRSAHLYQDKVKKEV*QGE*FHL 1584 Score = 26.7 bits (52), Expect(7) = 6e-51 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 / +1 Query: 401 CRRVEL*NQRSLMMRCPGQCC 463 CR E N+R + +CPG CC Sbjct: 751 CRVREQCNRRMWVGKCPG*CC 813 Score = 68.9 bits (144), Expect(6) = 5e-36 Identities = 32/58 (55%), Positives = 37/58 (63%) Frame = -1 / -2 Query: 914 IANFLWR*RAQRACIAISTWLQTELHRCPSDSHLLVIVEGNEPASLFTWTYMLLPLQG 741 I NFLWR*RAQRACI S + +E C + S L I EGN+ S F W MLLPL+G Sbjct: 2146 ITNFLWR*RAQRACIESSMFPLSEAIMCAAVSQCLDIAEGNKFISPFAWIEMLLPLEG 1973 Score = 48.3 bits (99), Expect(6) = 5e-36 Identities = 24/55 (43%), Positives = 29/55 (52%) Frame = -1 / -2 Query: 461 STVLGISSSNFSDFTTPLSCTEAAAFEASGIHVIFPVLVICPSIFTDEDFC*SFP 297 S LGIS FS T PL CT+AA E+ G+ I PV S+ + F SFP Sbjct: 811 SITLGISPPTFSGCTVPLPCTKAATIESPGLLTISPVDASGTSVLAEVHFGGSFP 647 Score = 47.8 bits (98), Expect(6) = 5e-36 Identities = 26/57 (45%), Positives = 31/57 (54%) Frame = -2 / -3 Query: 1129 FVVVSRSMDLPCS*KCRTTAQSN*LLLE*EKVGLSHHDSLVPQQFFSLVPADHHPKE 959 F+ V+RS D CS K RT N +LL K L HH +VP QFFS + PKE Sbjct: 4125 FLAVNRSTDPSCSCKYRTVLWRNLVLLSPGKWAL*HHGLVVPWQFFSEAL*AYRPKE 3955 Score = 42.3 bits (86), Expect(6) = 5e-36 Identities = 20/42 (47%), Positives = 23/42 (54%) Frame = -1 / -2 Query: 680 CFSAPITLVPHLFDDPTNGAWFIFASPFNS*LTPLDGTPSNE 555 C SAP PHL DD T FI++ PF *LTP P +E Sbjct: 1519 CTSAPTFSYPHLDDDSTIDILFIWSFPFGG*LTPFSLFPFSE 1394 Score = 27.6 bits (54), Expect(6) = 5e-36 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = -3 / -1 Query: 741 FKWNYIPCYHPLFTWS**R* 682 FK NY PCY FT S *R* Sbjct: 1586 FK*NYSPCYTSFFTLSW*R* 1527 Score = 26.7 bits (52), Expect(6) = 5e-36 Identities = 16/32 (50%), Positives = 17/32 (53%) Frame = -2 / -3 Query: 283 NRFAPVHPPSPIPTHRARLAVDA*SAGSAALC 188 NR H SPI RA LA + AGSAA C Sbjct: 642 NRPDCAHLLSPISQPRAHLADASSRAGSAARC 547 Score = 47.3 bits (97), Expect(4) = 9e-17 Identities = 28/65 (43%), Positives = 33/65 (50%) Frame = -3 / -1 Query: 1131 ASLLSAEVWIFLVPENAVQLPRATDCYLNKKRWVCLIMIH*FRNSFSHWSLQITIQKKLR 952 ASLLS EV I LV N Q T CY ++ C IM *F S ++T+QKK Sbjct: 4127 ASLLSTEVRILLVLVNIEQFFGET*CYFLQESGPCSIMA**FLGSSFQRPFKLTVQKKF* 3948 Query: 951 QSMCP 937 Q CP Sbjct: 3947 QPNCP 3933 Score = 43.7 bits (89), Expect(4) = 9e-17 Identities = 25/61 (40%), Positives = 27/61 (44%) Frame = -3 / -1 Query: 462 QHCPGHLIIKLL*FHNSTLLHGSCRL*SLRNTCHLPGSCHLPLHLYGRRFLLIISQSTDR 283 QH PGH +L H S LH SC R T HLPG C + F II DR Sbjct: 812 QHYPGHFPTHILRLHCSLTLHESCYHRIPRPTHHLPG*CFRNIRPRRSTFRWIIPPRIDR 633 Query: 282 I 280 I Sbjct: 632 I 630 Score = 39.1 bits (79), Expect(4) = 9e-17 Identities = 23/57 (40%), Positives = 29/57 (50%) Frame = -3 / -1 Query: 909 *LPLAIESTESLHSYLHMVAN*ATQMSFRLPFTGNC*RQ*ARLPFYLDIHAVAIARF 739 *LPLA++STESLH LH+ * + P + *R PF LD A R+ Sbjct: 2141 *LPLAVKSTESLHRELHVSPK*GNHVCSGFPVP*HS*R*QIYFPFCLDRDAFTTGRW 1971 Score = 25.4 bits (49), Expect(4) = 9e-17 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -3 / -1 Query: 252 RFQLTGLGSP*TLEALAQRHSVVLI 178 RF GL P L LAQR VVL+ Sbjct: 611 RFHSPGLT*PTPLPELAQRQGVVLV 537 Score = 50.6 bits (104), Expect(4) = 2e-12 Identities = 28/68 (41%), Positives = 39/68 (57%) Frame = +3 / +2 Query: 936 QGTYFGGVSFGW*SAGTNEKNCCGTSES**DKPTFSYSSNNQLLWAVVRHFQEQGRSILL 1115 QG +SFG *+ +EKNC GT++ * + F S+ + L VR+ QEQ S+LL Sbjct: 3932 QGN*VVRISFGR*A*RASEKNCQGTTKP*CYRAHFPGESSTKFLQRTVRYLQEQEGSVLL 4111 Query: 1116 LTTTKQQV 1139 LT K+ V Sbjct: 4112 LTARKRYV 4135 Score = 34.5 bits (69), Expect(4) = 2e-12 Identities = 17/30 (56%), Positives = 19/30 (63%) Frame = +3 / +2 Query: 861 GDSYASSLCSLSPEEVSNGGCKRGTQGTYF 950 G YASSLCSL P+EVSN R T Y+ Sbjct: 2093 GALYASSLCSLPPKEVSNHVN*RTTNWDYW 2182 Score = 30.9 bits (61), Expect(4) = 2e-12 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +3 / +2 Query: 741 TLQWQQHVCPGKKGGGLIAFNNYQ*MG 821 T QW +H+ PGK+G + F+ + +G Sbjct: 1973 TFQW*KHLYPGKRGNKFVTFSYVKALG 2053 Score = 24.0 bits (46), Expect(4) = 2e-12 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +2 / +1 Query: 182 RTTECR*ASASSVYGEPSPVSWNR 253 RTT CR*AS+ G SP NR Sbjct: 541 RTTPCR*ASSGRGVG*VSPGL*NR 612 Score = 37.7 bits (76), Expect(4) = 1e-07 Identities = 18/36 (50%), Positives = 23/36 (63%) Frame = -1 / -2 Query: 1139 YLLLRCCQQKYGSSLFLKMPYNCPEQLIVT*IRKGG 1032 ++ L CCQQKYGS LFL + + E+L T RK G Sbjct: 4135 HVSLPCCQQKYGSFLFL*ISNSSLEKLSATFSRKVG 4028 Score = 35.4 bits (71), Expect(4) = 1e-07 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -2 / -3 Query: 463 AALSWASHHQTSLISQLHSPARKLPPLKPQEY 368 AAL WA H S ++ PARKL P PQ Y Sbjct: 813 AALPWAFPHPHSPVALFPYPARKLLPSNPQAY 718 Score = 26.7 bits (52), Expect(4) = 1e-07 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 / -3 Query: 907 TSSGDREHRELA*LSP 860 TS G +EHRELA* +P Sbjct: 2139 TSFGGKEHRELA*RAP 2092 Score = 23.1 bits (44), Expect(4) = 1e-07 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 / -3 Query: 316 ISADHFPEYRPNRFAPVHPPSPIPTHRARLAVDA*SA 206 IS DH P+ RP+ + P S H A + A SA Sbjct: 666 ISVDHSPQNRPDCAHLLSPISQPRAHLADASSRAGSA 556 Score = 47.8 bits (98), Expect(2) = 2e-07 Identities = 26/59 (44%), Positives = 36/59 (61%) Frame = +2 / +1 Query: 956 SFFWMVICRDQ*EKLLRN**IMMRQTHLFLFK*QSVALGSCTAFSGTRKIHTSADNNEA 1132 +FFW V + *++L RN * MM Q L K* V+ +C+ F+ TR+I TS D+ EA Sbjct: 3952 NFFWTVSLKGL*KELPRNY*AMMLQGPLSWRK*H*VSPKNCSIFTRTRRIRTSVDSKEA 4128 Score = 33.6 bits (67), Expect(2) = 2e-07 Identities = 21/58 (36%), Positives = 28/58 (48%) Frame = +2 / +1 Query: 737 LNLAMATACMSR*KGRRAHCLQQLPVNGSLKDICVAQFATMWR*LCKLSVLSIARGS* 910 ++L + A +SR KG+ LQ G + W LCKLSVL A+GS* Sbjct: 1969 VHLPVVKASLSRQKGK*ICYLQLCQGTGKPLHT*LPHLGETWSSLCKLSVLFTAKGS* 2142
>LOC_Os04g30390:12004.t02726:unspliced-genomic conserved hypothetical protein| Length = 2255 Score = 95.2 bits (202), Expect(2) = 2e-27 Identities = 38/62 (61%), Positives = 46/62 (74%) Frame = +1 / +3 Query: 934 HRAHTLAEFLLDGDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKEDPYF 1113 +RA LAEFLLDGD+ GPM+K +LVNHD T P F+ + I CS QL+ I+RNKED YF Sbjct: 2070 NRATQLAEFLLDGDINGPMKKNKEDLVNHDATGPKFIQEYAIQCSKQLFDIYRNKEDLYF 2249 Query: 1114 C* 1119 C* Sbjct: 2250 C* 2255 Score = 53.2 bits (110), Expect(2) = 2e-27 Identities = 24/57 (42%), Positives = 32/57 (56%) Frame = +1 / +2 Query: 778 REAGSLPSTITSKWESEGHLCSSVCNHVEIAMQALCALYRQRKLAMEDAREEHRAHT 948 + A L TS WESE ++ +VE+ M A+CALYRQ+KL +E EE T Sbjct: 971 KSASLLSKIETSLWESEENMVIRFMENVELCMGAICALYRQKKLMVESTCEERTKFT 1141 Score = 54.7 bits (113), Expect(2) = 3e-09 Identities = 26/62 (41%), Positives = 32/62 (51%) Frame = -3 / -1 Query: 1119 SAEVWIFLVPENAVQLPRATDCYLNKKRWVCLIMIH*FRNSFSHWSLQITIQKKLRQSMC 940 S +V I +P N QL RA C + C IM+H* HW + ITIQKK Q C Sbjct: 2255 STKV*ILFIPVNVKQLLRALYCIFLDEFGPCSIMVH*VFFVLLHWPINITIQKKFCQLCC 2076 Query: 939 PV 934 P+ Sbjct: 2075 PI 2070 Score = 32.2 bits (64), Expect(2) = 3e-09 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = -1 / -3 Query: 908 NFLWR*RAQRACIAISTWLQTELHRCPSDSHLLVIVEGNEPASL 777 +F WR*RAQ A + ST+ + SDSH LV + + A L Sbjct: 1101 SFFWR*RAQIAPMQSSTFSMNLITIFSSDSHKLVSIFDSRDALL 970 Score = 30.9 bits (61), Expect(3) = 6e-04 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 / -2 Query: 933 FLSCILHC*LPLAIESTESLHSYLHMVAN*ATQMSFRLPFTG 808 F +C + *L LAI+S S H+ LH+ + RLP G Sbjct: 1126 FFTCRFNH*LLLAIKSANSSHAKLHIFHESDNHIFLRLPQAG 1001 Score = 30.4 bits (60), Expect(3) = 6e-04 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = -1 / -2 Query: 1118 QQKYGSSLFLKMPYNCPEQLI 1056 QQKY SSLFL M NC E I Sbjct: 2254 QQKYRSSLFL*MSNNCLEHCI 2192 Score = 26.7 bits (52), Expect(3) = 6e-04 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -1 / -2 Query: 989 IGPCRSPSKRNSA 951 IGP SPSKRNSA Sbjct: 2125 IGPLISPSKRNSA 2087 Score = 33.6 bits (67), Expect(3) = 0.007 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +2 / +1 Query: 950 WRSFFWMVICRDQ*EKLLRN**IMMRQ 1030 W++FFWMVI Q* + + ** MM Q Sbjct: 2086 WQNFFWMVILMGQ*RRTKKT**TMMLQ 2166 Score = 25.8 bits (50), Expect(3) = 0.007 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = +2 / +3 Query: 794 CLQQLPVNGSLKDICVAQFATMWR*LCKLSVLSIARGS*QWRMQERN 934 C + P GSL+ I ++ MW +L L IA+ S* +N Sbjct: 987 CQKSKPACGSLRKIWLSDSWKMWSFAWELFALFIAKRS*WLNRHVKN 1127 Score = 24.9 bits (48), Expect(3) = 0.007 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +2 / +1 Query: 1055 QSVALGSCTAFSGTRKIHT 1111 Q AL SC F+G ++I+T Sbjct: 2191 QYSALSSCLTFTGIKRIYT 2247
>LOC_Os01g12180:12001.t01086:unspliced-genomic expressed protein| Length = 2532 Score = 68.3 bits (143), Expect(2) = 3e-14 Identities = 28/60 (46%), Positives = 40/60 (66%) Frame = +1 / +1 Query: 934 HRAHTLAEFLLDGDLQGPMRKTVAELVNHDETNPPFLIQVTISCSGQLYGIFRNKEDPYF 1113 +R ++AEFLLDGD GP++KTV +L +D F ++ S QL+ I++NKEDPYF Sbjct: 2029 YRGSSIAEFLLDGDTFGPLKKTVHDLEQYDRYALEFCHKLAARYSKQLFSIYQNKEDPYF 2208 Score = 35.4 bits (71), Expect(2) = 3e-14 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +1 / +1 Query: 814 KWESEGHLCSSVCNHVEIAMQALCALYRQR 903 +W+ E + S+ H E+ ++A+CALYR++ Sbjct: 1243 EWKYEAEMLSAFAAHPELCLKAVCALYRKQ 1332
>LOC_Os07g08300:12007.t04710:unspliced-genomic major facilitator superfamily antiporter, putative, expressed| Length = 13364 Score = 39.1 bits (79), Expect = 0.065 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -2 / -3 Query: 796 AMSPPPFLPGHTCCCHCKVQMELHPLLS 713 ++SP P LP H CCCHC + L L+S Sbjct: 1905 SLSPHPSLPLHICCCHCPLCPLLRSLVS 1822
>LOC_Os11g13630:12011.t01197:unspliced-genomic gibberellin receptor GID1L2, putative| Length = 1095 Score = 38.1 bits (77), Expect = 0.13 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +1 / -1 Query: 379 ASKAAASVQESGVVKSEKFDDEMPRTVLLPSRG 477 AS AA V+E+G + + DD++PR LP RG Sbjct: 222 ASGGAAGVEEAGTERDRRVDDDVPRRDTLPGRG 124
>LOC_Os02g05710:12002.t00469:unspliced-genomic expressed protein| Length = 3514 Score = 37.3 bits (75), Expect = 0.23 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -2 / +1 Query: 844 SYTDVLQTPIYW*LLKAMSPPPFLPGHTCCCHC 746 S + +L +P++ LL A +PP + G CCC C Sbjct: 379 SSSSLLSSPLFSSLLSATAPPTYPRGRCCCCCC 477
>LOC_Os02g30460:12002.t02739:unspliced-genomic mitochondrial NADH ubiquinone oxidoreductase 29 kDa subunit,| putative, expressed Length = 3689 Score = 30.4 bits (60), Expect(2) = 0.27 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 / +3 Query: 262 PPSPIPTHRARLAVDA*SAGSAALC 188 PP P P RAR+ +AGSA+ C Sbjct: 213 PPPPRPPRRARIGCGGTTAGSASWC 287 Score = 24.0 bits (46), Expect(2) = 0.27 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -3 / +1 Query: 357 PGSCHLPLHLYGRRFLL 307 P HLP H +GRR L Sbjct: 61 PTPAHLPDHRHGRRLAL 111
>LOC_Os07g27480:12007.t02442:unspliced-genomic ubiquinone biosynthesis protein ubiB, putative, expressed| Length = 9548 Score = 29.5 bits (58), Expect(2) = 0.45 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -1 / +1 Query: 842 LHRCPSDSHLLVIVEGNEPASLFTWTYMLLPLQGSNGTTSLV 717 +H CP D HL +E A+ Y+LL TT+L+ Sbjct: 7612 MHVCPGDDHLAATMEEVSAAADCCCLYLLLTKISDGCTTALL 7737 Score = 24.0 bits (46), Expect(2) = 0.45 Identities = 7/21 (33%), Positives = 15/21 (71%) Frame = -3 / +1 Query: 1002 NSFSHWSLQITIQKKLRQSMC 940 ++F+ WSL+ + +L+ S+C Sbjct: 7507 SNFNLWSLESMVMDRLKFSLC 7569
>LOC_Os04g34530:12004.t03128:unspliced-genomic nodulin protein, putative, expressed| Length = 5318 Score = 35.9 bits (72), Expect = 0.60 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -2 / -2 Query: 304 HFPEYRPNRFAPVHPPSPIPTHRA 233 H +RP R AP HP SP PT RA Sbjct: 163 HHRRHRPPRLAPHHPQSPPPTKRA 92
>LOC_Os07g36930:12007.t03362:unspliced-genomic expressed protein| Length = 2917 Score = 35.4 bits (71), Expect = 0.82 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = -1 / +1 Query: 554 PCFSPIPALQ*SLLEEAFCRGLVLRSPREGSSTVLGISSSNFSDFTTPLSCTEAAA 387 P +P P+L + A CRG R P GS + ++S+ S T+P++ T A + Sbjct: 304 PPSAPSPSLARPISSTASCRGCRRRRPGAGSPSTPATAASSSSPSTSPMTPTAATS 471
>LOC_Os03g18630:12003.t01633:unspliced-genomic receptor-like kinase RHG1, putative, expressed| Length = 2786 Score = 35.4 bits (71), Expect = 0.85 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 / -3 Query: 1 ELALVPGDAAPEPVHQDEGRV 63 EL LV GD PEP+H+DEG + Sbjct: 1563 ELLLVLGDLLPEPLHRDEGAI 1501
>LOC_Os01g29600:12001.t02646:unspliced-genomic expressed protein| Length = 677 Score = 35.0 bits (70), Expect = 1.1 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -2 / -3 Query: 313 SADHFPEYRPNRFAPVHPPSPIPTHRA 233 +A P RP R AP PP P P HRA Sbjct: 399 AASASPSRRPRRLAPPPPPPPPPPHRA 319
>LOC_Os07g01560:12007.t00055:unspliced-genomic sugar transport protein 1, putative, expressed| Length = 5212 Score = 29.9 bits (59), Expect(2) = 1.1 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -1 / +3 Query: 575 DGTPSNEPCFSPIPALQ*SLLEEAFCRGLVLRSPREGSST 456 DG + C PIP L LL +A CR L +G+S+ Sbjct: 4968 DGKKKSCGCAGPIPLLSQMLL*DACCRNQGLAGDLQGTSS 5087 Score = 28.1 bits (55), Expect(2) = 1.1 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -3 / +1 Query: 723 PCYHPLFTWS**R*MFF 673 PC HP FTW+* R F Sbjct: 2161 PCIHPRFTWN*RRLFLF 2211
>LOC_Os08g11560:12008.t01038:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1258 Score = 34.5 bits (69), Expect = 1.6 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 / +1 Query: 1238 FFFFFGEELTRITLIHTVWFRYKLRSLHPTHILY 1137 FFF F + + +H +W+RY S TH+ Y Sbjct: 172 FFFLFTKSY*LVGTVHLLWYRYNHDSTSTTHLSY 273
>LOC_Os02g22260:12002.t02014:unspliced-genomic fruit protein PKIWI502, putative, expressed| Length = 11685 Score = 34.1 bits (68), Expect = 2.1 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -2 / +2 Query: 448 ASHHQTSLISQLHSPARKLPPLKP 377 +SHH++S +S LHSP PPL P Sbjct: 3797 SSHHRSSNLS*LHSPILLAPPLNP 3868
>LOC_Os05g19560:12005.t01722:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7773 Score = 31.3 bits (62), Expect(2) = 2.2 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 / -3 Query: 243 VGIGEGGWTGAKRFGRY 293 VG GEGGW A+ FG + Sbjct: 2491 VGAGEGGWADAEEFGEF 2441 Score = 26.3 bits (51), Expect(2) = 2.2 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 / -3 Query: 194 CR*ASASSVYGEPSPVSWNRGRG 262 CR G PSP+S RGRG Sbjct: 7045 CRRPGEEEAGGYPSPISSPRGRG 6977
>LOC_Os10g36229:12010.t02907:unspliced-genomic mov34/MPN/PAD-1 family protein| Length = 9801 Score = 29.0 bits (57), Expect(2) = 2.7 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 784 AGSLPSTITSKWESEGHLC 840 A ++ S + +WES GHLC Sbjct: 5756 ASAISSVVPFQWESPGHLC 5812 Score = 28.6 bits (56), Expect(2) = 2.7 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +3 / +3 Query: 252 GEGGWTGAKRFGR 290 G GGW GA R+GR Sbjct: 3384 GRGGWPGADRYGR 3422
>LOC_Os12g32710:12012.t02966:unspliced-genomic NB-ARC domain containing protein, expressed| Length = 3768 Score = 33.6 bits (67), Expect = 2.9 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 / +1 Query: 1042 EKVGLSHHDSLVPQQFFSLVPADHHPKETPPKY 944 EK+ H + L+ + FFSL+P + HP + Y Sbjct: 1468 EKIAREHFNILLKKSFFSLIPRELHPDPSTDYY 1566
>LOC_Os04g18530:12004.t01595:unspliced-genomic hypothetical protein| Length = 324 Score = 33.6 bits (67), Expect = 2.9 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / -1 Query: 363 HLPGSCHLPLHLYGRRFLLIISQSTDRIALPLSTPLP 253 HL S L + + RR+LL++S+ + LPL++P P Sbjct: 315 HLLSSRSLRIRHHQRRYLLVLSRPLAAVRLPLASPRP 205
>LOC_Os06g18920:12006.t01715:unspliced-genomic hypothetical protein| Length = 1119 Score = 33.6 bits (67), Expect = 3.0 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 / -3 Query: 982 GPMRKTVAELVNHDETNPPFLIQVTISCSGQLYG 1083 GPM + H PPFL +T+ C+G L G Sbjct: 544 GPMWAPHVRVTRHHPLFPPFLFYLTVLCAGHLAG 443
>LOC_Os02g28400:12002.t02534:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 9765 Score = 27.2 bits (53), Expect(3) = 3.0 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = -2 / -3 Query: 670 HQLPWCHICSMIQPMVPGSF 611 H L W H+CS +Q + F Sbjct: 7114 HNLKWAHLCSRMQGTIISKF 7055 Score = 25.8 bits (50), Expect(3) = 3.0 Identities = 10/34 (29%), Positives = 16/34 (47%) Frame = -2 / -1 Query: 550 VFRQFQLYNSHSWRKPSVEGSC*EAPEKEAALSW 449 +F Q + + +W K V C +PE +A W Sbjct: 4893 IFLWNQNHRNSTWTKRHVRSLCQASPEPDAESPW 4792 Score = 25.4 bits (49), Expect(3) = 3.0 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = -2 / -1 Query: 301 FPEYRPNRFAPVHPPSPIPTH 239 FP+ P + P PP P+ T+ Sbjct: 3399 FPDLSPPKIEPWQPPRPLLTY 3337
>LOC_Os04g42520:12004.t03800:unspliced-genomic adenine phosphoribosyltransferase 2, putative, expressed| Length = 5075 Score = 27.6 bits (54), Expect(2) = 3.7 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = -3 / +3 Query: 348 CHLPLHLYGRRFLLIIS 298 C +P +L+GR FLL++S Sbjct: 969 CEIP*YLWGRSFLLLLS 1019 Score = 22.6 bits (43), Expect(2) = 3.7 Identities = 7/23 (30%), Positives = 12/23 (52%) Frame = -2 / +2 Query: 304 HFPEYRPNRFAPVHPPSPIPTHR 236 H P + +F P+ PP I ++ Sbjct: 1046 HHPSHHLQQFFPLSPPPTISQYK 1114
>LOC_Os12g06440:12012.t00529:unspliced-genomic expressed protein| Length = 4626 Score = 33.1 bits (66), Expect = 4.0 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -1 / -1 Query: 653 PHLFDDPTNGAWFIFASPFN 594 PH+ P G WFIF SP N Sbjct: 2262 PHILKPPIKGNWFIFVSPKN 2203
>LOC_Os07g03210:12007.t00211:unspliced-genomic hypothetical protein| Length = 5098 Score = 33.1 bits (66), Expect = 4.0 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -2 / +1 Query: 805 LLKAMSPPPFLPGHTCCCHCKVQMEL 728 L ++ S P LP HT C CKVQ+++ Sbjct: 2545 LCESQSRGP*LPYHTTACQCKVQLQI 2622
>LOC_Os04g06920:12004.t00567:unspliced-genomic conserved hypothetical protein| Length = 2734 Score = 33.1 bits (66), Expect = 4.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -1 / -1 Query: 437 SNFSDFTTPLSCTEAAAFEASGIHVIFPVLV 345 +NF D +T SCT AA F +S H F LV Sbjct: 1459 ANFRDHSTRTSCTRAACFPSSLHHTCFKWLV 1367
>LOC_Os04g06070:12004.t00487:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6691 Score = 27.2 bits (53), Expect(2) = 4.9 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -1 / +3 Query: 1196 IHTVWFRYKLRSLHPTHILY 1137 +H +W+RY S TH+ Y Sbjct: 5622 VHLLWYRYNHDSTSTTHLSY 5681 Score = 22.6 bits (43), Expect(2) = 4.9 Identities = 5/10 (50%), Positives = 10/10 (100%) Frame = -3 / +1 Query: 1056 CYLNKKRWVC 1027 CY++KK+++C Sbjct: 5734 CYVSKKKFIC 5763
>LOC_Os01g25270:12001.t02245:unspliced-genomic pentatricopeptide repeat protein PPR986-12, putative, expressed| Length = 3131 Score = 25.4 bits (49), Expect(2) = 5.2 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -2 / +2 Query: 286 PNRFAPVHPPSPIP 245 P R AP HPP P P Sbjct: 68 PPRPAPPHPPPPCP 109 Score = 24.4 bits (47), Expect(2) = 5.2 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = -2 / +2 Query: 262 PPSPIPTHRARLAVDA*SAGSAAL 191 PP P P H +A S G+AA+ Sbjct: 98 PPCPPPPHHPTIASTISSLGAAAI 169
>LOC_Os05g42170:12005.t03753:unspliced-genomic transposon protein, putative, unclassified| Length = 402 Score = 29.9 bits (59), Expect(2) = 5.3 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / -3 Query: 608 ASPFNS*LTPLDGTPSNEPCFSPIP 534 A+P+ P +P N PCFSP P Sbjct: 76 AAPYKPRRPPFPFSPPNLPCFSPAP 2 Score = 22.1 bits (42), Expect(2) = 5.3 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = -2 / -1 Query: 799 KAMSPPPFLP 770 K +SPPPF P Sbjct: 213 KPLSPPPFSP 184
>LOC_Os12g07260:12012.t00610:unspliced-genomic DNA-binding protein, putative, expressed| Length = 5018 Score = 32.7 bits (65), Expect = 5.5 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -2 / +2 Query: 1153 LPTYCTCCFVVVSRSMDLPC 1094 L +C CC V SRS+ +PC Sbjct: 1016 LAFFCPCCVVATSRSIQMPC 1075
>LOC_Os11g47800:12011.t04274:unspliced-genomic GTP binding protein, putative, expressed| Length = 3471 Score = 32.7 bits (65), Expect = 5.5 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -2 / +1 Query: 1180 FGTSYGVCILPTYCTCC 1130 F TS+G+C+ P+YC C Sbjct: 1267 FATSHGICLKPSYCPFC 1317
>LOC_Os01g58540:12001.t05249:unspliced-genomic hypothetical protein| Length = 980 Score = 32.6 bits (65), Expect = 5.7 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 / +2 Query: 1087 FRNKEDPYFC*QQRSSKYSMWVGCRLRSLYRN 1182 FR P+FC +Q ++ W+G R R+L R+ Sbjct: 200 FRRDRSPWFCHRQAATTAPRWLGHRRRNLLRS 295
>LOC_Os09g33600:12009.t02936:unspliced-genomic VAN3, putative, expressed| Length = 7602 Score = 26.3 bits (51), Expect(2) = 6.5 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -2 / +3 Query: 433 TSLISQLHSPARKLPPLKPQEY 368 TSL+S L SP+ +PP + Y Sbjct: 18 TSLLSPLASPSHSIPPPNRRHY 83 Score = 23.1 bits (44), Expect(2) = 6.5 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = -2 / +2 Query: 277 FAPVHPPSPIPTHRA 233 FA PPSP P H A Sbjct: 110 FARAPPPSPSPRHCA 154
>LOC_Os01g28040:12001.t02503:unspliced-genomic transposon protein, putative, unclassified| Length = 5292 Score = 26.3 bits (51), Expect(2) = 6.7 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -2 / +2 Query: 286 PNRFAPVHPPSP 251 P+RF P+ PPSP Sbjct: 974 PSRFFPISPPSP 1009 Score = 23.1 bits (44), Expect(2) = 6.7 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -2 / +2 Query: 265 HPPSPIPTHRARLA 224 HPP P+P R+ LA Sbjct: 1040 HPPLPLPLLRSPLA 1081
>LOC_Os08g23829:12008.t02154:unspliced-genomic conserved hypothetical protein| Length = 1395 Score = 26.3 bits (51), Expect(2) = 7.4 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -2 / -3 Query: 286 PNRFAPVHPPSP 251 P+RF P+ PPSP Sbjct: 484 PSRFFPISPPSP 449 Score = 23.1 bits (44), Expect(2) = 7.4 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -2 / -3 Query: 265 HPPSPIPTHRARLA 224 HPP P+P R+ LA Sbjct: 418 HPPLPLPLLRSPLA 377
>LOC_Os07g13520:12007.t01217:unspliced-genomic expressed protein| Length = 3047 Score = 29.0 bits (57), Expect(2) = 7.6 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 / +3 Query: 472 EKEAALSWASHHQTSLISQLHSPARKLPPLKPQ 374 EK+ W SH+Q S S L PA+ + + P+ Sbjct: 2313 EKDKGHGWYSHNQCSTTSPLSPPAQIVADVPPK 2411 Score = 25.4 bits (49), Expect(2) = 7.6 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = -3 / +1 Query: 954 RQSMCPVFLSCILHC 910 R S+C +F SC L C Sbjct: 1555 RFSLCYIFFSCFLEC 1599
>LOC_Os10g30460:12010.t02380:unspliced-genomic conserved hypothetical protein| Length = 1108 Score = 32.2 bits (64), Expect = 7.6 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -3 / -2 Query: 381 SLRNTCHLPGSCHLPLHLYGRRFLLIISQSTDRIALPLSTPLPR 250 +LR HLP +P HL RR LL + + + + L+ +PR Sbjct: 240 NLRTPPHLPPPAAVPYHLAMRRRLLRLCKDEESLGCLLTVAIPR 109
>LOC_Os08g23390:12008.t02111:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1805 Score = 32.2 bits (64), Expect = 7.6 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 / +2 Query: 757 CCHCKVQMELHPLLSSALHMVLIEV 683 CC CK + HPLLS AL +L ++ Sbjct: 80 CCFCKYAILCHPLLSRALAYLLCDL 154
>LOC_Os06g45940:12006.t04282:unspliced-genomic potassium transporter 13, putative, expressed| Length = 7530 Score = 32.2 bits (64), Expect = 7.6 Identities = 18/63 (28%), Positives = 27/63 (42%) Frame = -1 / +1 Query: 908 NFLWR*RAQRACIAISTWLQTELHRCPSDSHLLVIVEGNEPASLFTWTYMLLPLQGSNGT 729 +F W RA C+AIS R PS + + + + W+ L L S+ T Sbjct: 1279 HFYWHIRASELCMAISASHPCTCTRTPSPENCVFMRRMKRSLGYYLWSSGALLLYLSSST 1458 Query: 728 TSL 720 +SL Sbjct: 1459 SSL 1467
>LOC_Os04g14610:12004.t01280:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2449 Score = 32.2 bits (64), Expect = 7.6 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 / +3 Query: 763 TCCCHCKVQMELHPLLSSALHMVLIEV 683 T CC CK + HPLLS AL +L ++ Sbjct: 693 TKCCFCK*AILCHPLLSCALAFLLCDL 773
>LOC_Os03g60992:12003.t05334:unspliced-genomic expressed protein| Length = 7339 Score = 32.2 bits (64), Expect = 7.6 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -2 / +3 Query: 1153 LPTYCTCCFVVVSRSMDLPCS*KC 1082 L + C CC + R+ D+PC+* C Sbjct: 684 LVSACACCVLASERTSDVPCA*HC 755
>LOC_Os03g29510:12003.t02572:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1640 Score = 32.2 bits (64), Expect = 7.6 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -1 / +3 Query: 677 FSAPITLVPHLFDDPTNGAWFIFASPFNS*LTPLDGTPSNEP 552 +S P+T+ PH+ G W SP S TP PS P Sbjct: 393 WSLPVTVAPHVAAPRPAGRWAGSCSPVTSRFTPGGSGPSTWP 518
>LOC_Os03g03260:12003.t05653:unspliced-genomic BEL1-related homeotic protein 14, putative, expressed| Length = 5710 Score = 32.2 bits (64), Expect = 7.6 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -2 / -1 Query: 310 ADHFPEYRPNRFAPVHPPSPIPTHR 236 A P YRP R V P P+P HR Sbjct: 1918 APEVPRYRPRRHRRVRPRRPLPGHR 1844
>LOC_Os11g07890:12011.t00680:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 11073 Score = 25.8 bits (50), Expect(2) = 8.4 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = -2 / +1 Query: 796 AMSPPPFLPGHTC 758 A +PPP P HTC Sbjct: 1072 AAAPPPCRPAHTC 1110 Score = 23.1 bits (44), Expect(2) = 8.4 Identities = 6/15 (40%), Positives = 8/15 (53%) Frame = -2 / +2 Query: 772 PGHTCCCHCKVQMEL 728 P HTC C + E+ Sbjct: 1226 PSHTCLALCNIHQEM 1270
>LOC_Os03g41662:12003.t03576:unspliced-genomic hypothetical protein| Length = 507 Score = 26.3 bits (51), Expect(2) = 8.9 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +3 / +2 Query: 237 R*VGIGEGGWTGAKRF 284 R +G+ GGW G +RF Sbjct: 206 RRLGVSPGGWRGGRRF 253 Score = 25.4 bits (49), Expect(2) = 8.9 Identities = 9/30 (30%), Positives = 12/30 (40%) Frame = +3 / +1 Query: 579 WSQSAIEGGCKNEPGTIGWIIEQMWHQGNW 668 W S E + PG +GW + G W Sbjct: 259 WESSRKEASGSSRPGGMGWQKREGGDPGGW 348
>LOC_Os02g44740:12002.t04064:unspliced-genomic expressed protein| Length = 5246 Score = 28.6 bits (56), Expect(2) = 9.0 Identities = 8/23 (34%), Positives = 15/23 (65%) Frame = -2 / +1 Query: 1174 TSYGVCILPTYCTCCFVVVSRSM 1106 T+ GVC+L C C+++++ M Sbjct: 3025 TNIGVCVLEVTCCNCYLLINEKM 3093 Score = 26.3 bits (51), Expect(2) = 9.0 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -2 / +3 Query: 298 PEYRPNRFAPVHPPSPIPTHRAR 230 P RP R V PP P+P R R Sbjct: 4512 PHPRPPRPLQVLPPRPLPPRRPR 4580
>LOC_Os06g42740:12006.t03965:unspliced-genomic hypothetical protein| Length = 978 Score = 28.6 bits (56), Expect(2) = 9.1 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 / -1 Query: 766 HTCCCHCKVQMELH 725 HT CC C +++E+H Sbjct: 945 HTVCCACNLKLEIH 904 Score = 24.0 bits (46), Expect(2) = 9.1 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = -3 / -3 Query: 339 PLHLYGRRFLLIISQSTDRIALPLSTPLPRFQLTGLGSP*TLEA 208 PLHL R + + ++ L PL R + T G+P +L A Sbjct: 673 PLHLCCRNLSSVCATTSSSATGLLRPPLGREETTAGGTPSSLVA 542
>LOC_Os12g39880:12012.t03667:unspliced-genomic expressed protein| Length = 2840 Score = 25.8 bits (50), Expect(2) = 9.4 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = -1 / +3 Query: 584 TPLDGTPSNEPCFSPIP 534 TP GTPS P SP P Sbjct: 168 TPAAGTPSASPSASPTP 218 Score = 23.1 bits (44), Expect(2) = 9.4 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -2 / +1 Query: 406 PARKLPPLKP 377 P R+LPPL+P Sbjct: 214 PPRRLPPLRP 243 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.317 0.131 0.384 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 505,616,516 Number of extensions: 8413607 Number of successful extensions: 37349 Number of sequences better than 10.0: 47 Length of query: 412 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 362 Effective length of database: 52,799,986 Effective search space: 19113594932 Effective search space used: 19113594932 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
