ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64j02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128O15, full insert sequence Length = 1368 Score = 1055 bits (532), Expect = 0.0 Identities = 837/938 (89%), Gaps = 3/938 (0%) Strand = Plus / Plus Query: 260 cggctgcgcatcttctccggcacggcgaacccgacgctggcggaggagatcgcctgctac 319 |||||||||||||||||||||||||||||||||| ||||||| ||||| | || |||||| Sbjct: 238 cggctgcgcatcttctccggcacggcgaacccgaggctggcgcaggaggtggcgtgctac 297 Query: 320 ctggggctggagctggggcggatcaagatcaagcggttcgccgacggggagctgtacgtg 379 |||||| ||||||||||| || | ||||||||||||||||| |||||||||||||||||| Sbjct: 298 ctggggatggagctggggagggtgaagatcaagcggttcgcggacggggagctgtacgtg 357 Query: 380 cagctgcaggagagcgtgcgcggcagcgacgtgttcctggtgcagccgacctgcccgccg 439 |||||||||||||||||||| || |||||||||||||||||||||| |||||||||||| Sbjct: 358 cagctgcaggagagcgtgcgtgggtgcgacgtgttcctggtgcagcccacctgcccgccg 417 Query: 440 gcgaacgagaacctcatggagctgctcatcatggtggacgcctgccgccgcgcctccgcc 499 || ||||||||||| |||||||| ||||||||| | ||||| |||||||||||||||||| Sbjct: 418 gcaaacgagaacctgatggagctcctcatcatgatcgacgcatgccgccgcgcctccgcc 477 Query: 500 aagaccatcaccgccgtggtgccctacttcggctacgcgcgcgccgaccgcaagatgc-- 557 ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 478 aagaccatcaccgccgtcgtgccctacttcgggtacgcccgcgccgaccgcaagatgcgc 537 Query: 558 -agggccgcgagtccatcgccgccaagctcgtcgccaacctcatcacgcaggccggcgcg 616 ||||| ||||| |||||||||||||| || ||||||||||||||| |||||||||| Sbjct: 538 ggcggccgggagtcgatcgccgccaagctggtggccaacctcatcacggaggccggcgcc 597 Query: 617 caccgcgtgctcgcctgcgacctccactccggccagtccatcggctacttcgacatcccg 676 ||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 598 caccgcgtgctggcctgcgacctccactcggggcagtccatcggctacttcgacatcccc 657 Query: 677 gtggaccacgtctacggccagcccgtcatcctcgactacctcgccagcaagaccatctgc 736 |||||||| || ||||| ||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 658 gtggaccatgtgtacgggcagccggtgatcctggactacctggccagcaagaccatctgc 717 Query: 737 cccaacgacgtcgtcgtcgtctcccccgacgtcgggggcgtcgccagggcgcgcgccttc 796 ||| |||| || || || || ||||| ||||| || ||||||||| |||| ||| ||||| Sbjct: 718 cccgacgaggtggtggtggtgtccccggacgtgggtggcgtcgcccgggcccgcaccttc 777 Query: 797 gccaagaagctctccgacgcgcccctcgccatcgtcgacaagcggcggctgggccacaac 856 ||||||||||| || |||||||| || |||||||| ||||||||||||| ||| |||||| Sbjct: 778 gccaagaagctgtcggacgcgccgctggccatcgtggacaagcggcggcaggggcacaac 837 Query: 857 caggccgaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtggac 916 ||| | |||||| || |||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 838 cagtcggaggtggtgcacctcatcggcgacgtcagggggaaggtggcggtgatggtggac 897 Query: 917 gacatgatcgacaccgccgggacgatgcacaagggcgcagagctgctgcacagggagggg 976 |||||||||||||| || |||||| || | |||| || |||||||||||||||||||| Sbjct: 898 gacatgatcgacactgcggggacggtgtcccagggagcggagctgctgcacagggagggc 957 Query: 977 gccagggcggtgtacgcctgcagcacccacgccgtgctcagcccgcccgccgtcgagagg 1036 |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 958 gccagggccgtctacgcctgcagcacccacgccgtgctcagcccgcccgccgtcgacagg 1017 Query: 1037 ctctccggcggcctcttccaggaggtgatcatcaccaacaccgtgccggtgccgccggac 1096 |||||| ||||||||||||||||||||||| ||||||||||||| || |||| | || Sbjct: 1018 ctctccagcggcctcttccaggaggtgatcgtcaccaacaccgtccccgtgcttcaccac 1077 Query: 1097 cagcgattcccgcagctcaccgtgctctccgtcgccaacctcctcggcgagaccatctgg 1156 | | ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1078 cggaccttcccccagctcaccgtcctctccgtcgccaatctcctcggcgagaccatctgg 1137 Query: 1157 cgcgtccacgacgagtgctctgtcagcagcatcttcca 1194 ||||| |||||||| ||||||||||| ||||||||||| Sbjct: 1138 cgcgttcacgacgactgctctgtcagtagcatcttcca 1175
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 105 bits (53), Expect = 4e-19 Identities = 95/109 (87%) Strand = Plus / Minus Query: 260 cggctgcgcatcttctccggcacggcgaacccgacgctggcggaggagatcgcctgctac 319 |||||||||||||||||||||||||||||||||||||||||| ||||| | || | ||| Sbjct: 126590 cggctgcgcatcttctccggcacggcgaacccgacgctggcgcaggaggtggcgttctat 126531 Query: 320 ctggggctggagctggggcggatcaagatcaagcggttcgccgacgggg 368 ||||| |||||||||| || | ||||||||||||||| | ||||||| Sbjct: 126530 ctgggcatggagctgggtagggtgaagatcaagcggttcacggacgggg 126482 Score = 52.0 bits (26), Expect = 0.005 Identities = 53/62 (85%) Strand = Plus / Minus Query: 411 tgttcctggtgcagccgacctgcccgccggcgaacgagaacctcatggagctgctcatca 470 |||||||||||||| | |||||||| || | ||||||||| | |||||||| ||||||| Sbjct: 126460 tgttcctggtgcaggccacctgcccaccacccaacgagaacatgatggagctcctcatca 126401 Query: 471 tg 472 || Sbjct: 126400 tg 126399
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 260 cggctgcgcatcttctccggcacggcgaacccgacgctggcggaggagatcgcctgctac 319 ||||||||||||||||||||||| |||||||||||||||||| ||||| | || ||||| Sbjct: 6049080 cggctgcgcatcttctccggcacagcgaacccgacgctggcgcaggaggtggcgtgctat 6049021 Query: 320 ctggggctggagctggggcggatcaagatcaagcggt 356 || || ||||| |||| ||| | ||||||||||||| Sbjct: 6049020 cttggcatggagttgggtcgggtaaagatcaagcggt 6048984
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 260 cggctgcgcatcttctccggcacggcgaacccgacgctggcggaggagatcgcctgctac 319 ||||||||||||||||||||||| |||||||||||||||||| ||||| | || ||||| Sbjct: 99892 cggctgcgcatcttctccggcacagcgaacccgacgctggcgcaggaggtggcgtgctat 99833 Query: 320 ctggggctggagctggggcggatcaagatcaagcggt 356 || || ||||| |||| ||| | ||||||||||||| Sbjct: 99832 cttggcatggagttgggtcgggtaaagatcaagcggt 99796
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 260 cggctgcgcatcttctccggcacggcgaacccgacgctggcggaggagatcgcctgctac 319 ||||||||||||||||||||||| |||||||||||||||||| ||||| | || ||||| Sbjct: 5097 cggctgcgcatcttctccggcacagcgaacccgacgctggcgcaggaggtggcgtgctat 5038 Query: 320 ctggggctggagctggggcggatcaagatcaagcggt 356 || || ||||| |||| ||| | ||||||||||||| Sbjct: 5037 cttggcatggagttgggtcgggtaaagatcaagcggt 5001
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 81.8 bits (41), Expect = 6e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 860 gccgaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtggacgac 919 |||||| | |||||| ||||||||||||| || ||||||||||| ||| || | |||||| Sbjct: 144968 gccgagatcatgaacgtcatcggcgacgtgaacgggaaggtggcggtgctgctcgacgac 144909 Query: 920 atgatcgacaccgccgg 936 ||||||||||||||||| Sbjct: 144908 atgatcgacaccgccgg 144892
>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7 Length = 347365 Score = 77.8 bits (39), Expect = 9e-11 Identities = 159/199 (79%) Strand = Plus / Plus Query: 356 ttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagcgacgtgttc 415 |||||||| || ||||| ||||||||| | |||||| | | || ||| |||| ||||| Sbjct: 261332 ttcgccgatggcgagctctacgtgcagatccaggagtccatccggggctgcgatgtgttt 261391 Query: 416 ctggtgcagccgacctgcccgccggcgaacgagaacctcatggagctgctcatcatggtg 475 ||| | ||||| |||||| | |||| ||| || |||| ||||||||||| ||||||||| Sbjct: 261392 ctgatccagcccacctgcgctccggtgaatgatcacctgatggagctgctgatcatggtg 261451 Query: 476 gacgcctgccgccgcgcctccgccaagaccatcaccgccgtggtgccctacttcggctac 535 || |||||||| || ||||| || |||||||| |||||||| || | ||||||| Sbjct: 261452 gatgcctgccgtcgggcctcggcgcgtcagatcaccgcagtggtgccgtattacggctac 261511 Query: 536 gcgcgcgccgaccgcaaga 554 || |||||||||||||||| Sbjct: 261512 gcccgcgccgaccgcaaga 261530
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 75.8 bits (38), Expect = 4e-10 Identities = 164/206 (79%) Strand = Plus / Minus Query: 349 caagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagcga 408 |||||| || ||||| || ||||| ||||||||| | |||||| | |||||| | || Sbjct: 1480596 caagcgttttgccgatggtgagctctacgtgcagatccaggagtcgatccgcggctgtga 1480537 Query: 409 cgtgttcctggtgcagccgacctgcccgccggcgaacgagaacctcatggagctgctcat 468 |||||| || | ||||| |||||| |||||| ||| || |||| ||||||||||| || Sbjct: 1480536 tgtgttcttgatccagcccacctgcgcgccggtgaatgaccacctgatggagctgctgat 1480477 Query: 469 catggtggacgcctgccgccgcgcctccgccaagaccatcaccgccgtggtgccctactt 528 ||||||||| |||||| | || ||||| || | |||||||||||||||||||||| Sbjct: 1480476 catggtggatgcctgcagacgggcctcggcacggcagatcaccgccgtggtgccctacta 1480417 Query: 529 cggctacgcgcgcgccgaccgcaaga 554 |||||| || || || |||||||||| Sbjct: 1480416 cggctatgcccgagcggaccgcaaga 1480391 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 914 gacgacatgatcgacaccgccgggacgat 942 ||||||||||||||||||| ||| ||||| Sbjct: 1480037 gacgacatgatcgacaccggcggcacgat 1480009
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 67.9 bits (34), Expect = 9e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtggacgacatg 922 |||||||||||||||||||||||||| | || |||| || ||| |||||||||||||| Sbjct: 6350106 gaggtgatgaacctcatcggcgacgtgagcggcaaggacgcggtgctggtggacgacatg 6350165 Query: 923 atcgacaccgccgg 936 | ||||||||||| Sbjct: 6350166 gtggacaccgccgg 6350179 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 426 cgacctgcccgccggcgaacgagaacctcatggagctgctcatcatg 472 ||||||||||||| |||||||| |||| |||||| ||||||||||| Sbjct: 6349672 cgacctgcccgcctgcgaacgatcacctgatggagttgctcatcatg 6349718 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 512 gccgtggtgccctacttcggctacgcgcg 540 ||||||||||||||| | ||||||||||| Sbjct: 8736066 gccgtggtgccctacctgggctacgcgcg 8736094
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 65.9 bits (33), Expect = 3e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 476 gacgcctgccgccgcgcctccgccaagaccatcaccgccgtggtgccctacttcggctac 535 |||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||| Sbjct: 2907175 gacgcctgccgccgcgcctcggcccgccagatcaccgccgtcttgccctactacggctac 2907116 Query: 536 gcgcgcgccgaccgcaa 552 || |||||||||||||| Sbjct: 2907115 gcccgcgccgaccgcaa 2907099
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 65.9 bits (33), Expect = 3e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 578 gccaagctcgtcgccaacctcatcacgcaggccggcg 614 |||||||||||||||||||| |||||||||||||||| Sbjct: 8186715 gccaagctcgtcgccaacctgatcacgcaggccggcg 8186751 Score = 42.1 bits (21), Expect = 4.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 505 catcaccgccgtggtgccctacttcggctacgc 537 ||||||||| ||| ||||||| ||||||||||| Sbjct: 8186642 catcaccgcggtgctgccctatttcggctacgc 8186674
>gb|DQ228189.1| Prototheca wickerhamii strain SAG 263-11 plastid ribose-phosphate diphosphokinase mRNA, partial cds; nuclear gene for plastid product Length = 667 Score = 63.9 bits (32), Expect = 1e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 456 tggagctgctcatcatggtggacgcctgccgccgcgcctccgccaagaccatcaccgccg 515 ||||||||||||||| | || ||||||||||||||||| || | ||||||||| | Sbjct: 572 tggagctgctcatcaccatcgatgcctgccgccgcgcctcggcgcgcagcatcaccgcgg 631 Query: 516 tggtgccctacttcggctacgcgcgcgccgac 547 || | |||||||| |||||||||||||||||| Sbjct: 632 tgctcccctactttggctacgcgcgcgccgac 663
>emb|CT829705.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102P05, full insert sequence Length = 2259 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 347 atcaagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagc 406 |||||||| || ||||| ||||| | |||||||||||||||||||| ||| | || || Sbjct: 474 atcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgc 533 Query: 407 gacgtgttcctggtgcagccgacctgc 433 || |||||| |||||||||| |||||| Sbjct: 534 gatgtgttcttggtgcagcccacctgc 560
>ref|NM_001064616.1| Oryza sativa (japonica cultivar-group) Os06g0617800 (Os06g0617800) mRNA, complete cds Length = 2163 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 347 atcaagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagc 406 |||||||| || ||||| ||||| | |||||||||||||||||||| ||| | || || Sbjct: 513 atcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgc 572 Query: 407 gacgtgttcctggtgcagccgacctgc 433 || |||||| |||||||||| |||||| Sbjct: 573 gatgtgttcttggtgcagcccacctgc 599
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 347 atcaagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagc 406 |||||||| || ||||| ||||| | |||||||||||||||||||| ||| | || || Sbjct: 24408673 atcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgc 24408614 Query: 407 gacgtgttcctggtgcagccgacctgc 433 || |||||| |||||||||| |||||| Sbjct: 24408613 gatgtgttcttggtgcagcccacctgc 24408587
>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012B02 Length = 149807 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 347 atcaagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagc 406 |||||||| || ||||| ||||| | |||||||||||||||||||| ||| | || || Sbjct: 20146 atcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgc 20087 Query: 407 gacgtgttcctggtgcagccgacctgc 433 || |||||| |||||||||| |||||| Sbjct: 20086 gatgtgttcttggtgcagcccacctgc 20060
>dbj|AK068485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151A20, full insert sequence Length = 1109 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 347 atcaagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagc 406 |||||||| || ||||| ||||| | |||||||||||||||||||| ||| | || || Sbjct: 11 atcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgc 70 Query: 407 gacgtgttcctggtgcagccgacctgc 433 || |||||| |||||||||| |||||| Sbjct: 71 gatgtgttcttggtgcagcccacctgc 97
>dbj|AK067505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109E14, full insert sequence Length = 2164 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 347 atcaagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagc 406 |||||||| || ||||| ||||| | |||||||||||||||||||| ||| | || || Sbjct: 514 atcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgc 573 Query: 407 gacgtgttcctggtgcagccgacctgc 433 || |||||| |||||||||| |||||| Sbjct: 574 gatgtgttcttggtgcagcccacctgc 600
>dbj|AK066802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075O08, full insert sequence Length = 2635 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 347 atcaagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagc 406 |||||||| || ||||| ||||| | |||||||||||||||||||| ||| | || || Sbjct: 868 atcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgc 927 Query: 407 gacgtgttcctggtgcagccgacctgc 433 || |||||| |||||||||| |||||| Sbjct: 928 gatgtgttcttggtgcagcccacctgc 954
>dbj|AK065878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047O13, full insert sequence Length = 2217 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 347 atcaagcggttcgccgacggggagctgtacgtgcagctgcaggagagcgtgcgcggcagc 406 |||||||| || ||||| ||||| | |||||||||||||||||||| ||| | || || Sbjct: 514 atcaagcgttttgccgatggggaaatctacgtgcagctgcaggagagtgtgaggggttgc 573 Query: 407 gacgtgttcctggtgcagccgacctgc 433 || |||||| |||||||||| |||||| Sbjct: 574 gatgtgttcttggtgcagcccacctgc 600
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 420 tgcagccgacctgcccgccggcgaacgagaacctcatggagctgct 465 |||||||||||||| ||||| ||||||||||||| ||||| ||||| Sbjct: 826589 tgcagccgacctgctcgccgacgaacgagaacctgatggaactgct 826634
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 58.0 bits (29), Expect = 8e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 476 gacgcctgccgccgcgcctccgccaagaccatcaccgccgtggtgccctacttcggctac 535 |||||||| ||||||||||| ||| | |||||||| || ||||||||| ||||||| Sbjct: 1729428 gacgcctgtcgccgcgcctctgcccggcagatcaccgctgtcttgccctactacggctac 1729487 Query: 536 gcgcgcgccgaccgcaa 552 || |||||||||||||| Sbjct: 1729488 gctcgcgccgaccgcaa 1729504
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 56.0 bits (28), Expect = 3e-04 Identities = 145/184 (78%) Strand = Plus / Minus Query: 753 tcgtctcccccgacgtcgggggcgtcgccagggcgcgcgccttcgccaagaagctctccg 812 |||| ||||||||||| || || ||| | ||||||||||||| ||||| || ||| | Sbjct: 957760 tcgtttcccccgacgtgggcggtgtcagccgggcgcgcgcctttgccaaaaaactcgatg 957701 Query: 813 acgcgcccctcgccatcgtcgacaagcggcggctgggccacaaccaggccgaggtgatga 872 |||| || || ||||||||||||||||| || | || | |||| | | ||| || |||| Sbjct: 957700 acgccccgcttgccatcgtcgacaagcgccgccaggctcccaacgaagtcgaagtcatga 957641 Query: 873 acctcatcggcgacgtcaaggggaaggtggccgtgatggtggacgacatgatcgacaccg 932 || | || |||||||||||||| || ||| | |||| ||||||||||||||||||| Sbjct: 957640 acgtgattggcgacgtcaagggcaaaaccgccatcctggtcgacgacatgatcgacaccg 957581 Query: 933 ccgg 936 |||| Sbjct: 957580 ccgg 957577 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Minus Query: 509 accgccgtggtgccctacttcggctacgcgcgcgccgaccgcaaga 554 ||||||||| | || |||| ||||||||| |||||||||||||||| Sbjct: 957998 accgccgtgcttccttactacggctacgcccgcgccgaccgcaaga 957953 Score = 42.1 bits (21), Expect = 4.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 1140 tcggcgagaccatctggcgcgtccacgacgagtgctctgtcagcagcat 1188 |||||||| | ||||||||| ||||||| || | ||| ||||||||||| Sbjct: 957373 tcggcgaggcgatctggcgcatccacgaagattcctccgtcagcagcat 957325 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 tacttcggctacgcgcgcgcc 544 ||||||||||||||||||||| Sbjct: 3958311 tacttcggctacgcgcgcgcc 3958331
>dbj|AK067686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119H01, full insert sequence Length = 1723 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 374 tacgtgcagctgcaggagagcgtgcgcggcagcgacgtgttcctggtgcagccgacctgc 433 |||||||||||||||||||| ||| | || |||| |||||| |||||||||| |||||| Sbjct: 11 tacgtgcagctgcaggagagtgtgaggggttgcgatgtgttcttggtgcagcccacctgc 70
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Plus Query: 260 cggctgcgcatcttctccggcacggcgaacccgacgctggcggaggagatcgcctgctac 319 ||||||| |||||||||||| |||| |||| ||||| ||| | ||||| | || ||||| Sbjct: 46984 cggctgctcatcttctccggtacggtgaactcgacgttggtgcaggaggtggcgtgctat 47043 Query: 320 ctggggctggagctggggcggatcaagatcaagcggttc 358 ||| | |||||||||| || | ||||||||||||||| Sbjct: 47044 ctgagcatggagctgggtcgagtgaagatcaagcggttc 47082 Score = 48.1 bits (24), Expect = 0.080 Identities = 45/52 (86%) Strand = Plus / Plus Query: 411 tgttcctggtgcagccgacctgcccgccggcgaacgagaacctcatggagct 462 ||||||||||||| | |||||||| ||| | ||||||||||| |||||||| Sbjct: 47113 tgttcctggtgcaagccacctgcccaccgcccaacgagaacctgatggagct 47164
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 54.0 bits (27), Expect = 0.001 Identities = 69/83 (83%) Strand = Plus / Minus Query: 860 gccgaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtggacgac 919 ||||||||||||||| ||||||| ||||| |||| ||| ||| | ||||||||||| Sbjct: 3454664 gccgaggtgatgaacatcatcggtgacgtggagggaaagacggcgatcctggtggacgac 3454605 Query: 920 atgatcgacaccgccgggacgat 942 | |||||||||||||| ||||| Sbjct: 3454604 ctcatcgacaccgccggaacgat 3454582
>gb|AE005721.1| Caulobacter crescentus CB15 section 47 of 359 of the complete genome Length = 12858 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Minus Query: 863 gaggtgatgaacctcatcggcgacgtcaagg 893 |||||||||||| |||||||||||||||||| Sbjct: 8459 gaggtgatgaacatcatcggcgacgtcaagg 8429
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 54.0 bits (27), Expect = 0.001 Identities = 81/99 (81%) Strand = Plus / Plus Query: 260 cggctgcgcatcttctccggcacggcgaacccgacgctggcggaggagatcgcctgctac 319 ||||||| |||||||||||| |||| |||| ||||| ||| | ||||| | || ||||| Sbjct: 16095814 cggctgctcatcttctccggtacggtgaactcgacgttggtgcaggaggtggcgtgctat 16095873 Query: 320 ctggggctggagctggggcggatcaagatcaagcggttc 358 ||| | |||||||||| || | ||||||||||||||| Sbjct: 16095874 ctgagcatggagctgggtcgagtgaagatcaagcggttc 16095912 Score = 48.1 bits (24), Expect = 0.080 Identities = 45/52 (86%) Strand = Plus / Plus Query: 411 tgttcctggtgcagccgacctgcccgccggcgaacgagaacctcatggagct 462 ||||||||||||| | |||||||| ||| | ||||||||||| |||||||| Sbjct: 16095943 tgttcctggtgcaagccacctgcccaccgcccaacgagaacctgatggagct 16095994 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cctcgccgtctccgtcgccggaggtggag 147 |||||||||| |||||||||||| ||||| Sbjct: 2792513 cctcgccgtcgccgtcgccggagatggag 2792541
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 52.0 bits (26), Expect = 0.005 Identities = 62/74 (83%) Strand = Plus / Minus Query: 407 gacgtgttcctggtgcagccgacctgcccgccggcgaacgagaacctcatggagctgctc 466 |||||||| |||||||| ||||||| ||||| | || || ||||| ||||| |||||| Sbjct: 1335703 gacgtgtttgtggtgcagtcgacctgtgcgccgaccaatgacaacctgatggaactgctc 1335644 Query: 467 atcatggtggacgc 480 |||||||| ||||| Sbjct: 1335643 atcatggtcgacgc 1335630 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 912 tggacgacatgatcgacaccgccgg 936 ||||||||||||||||||| ||||| Sbjct: 1335204 tggacgacatgatcgacacggccgg 1335180
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 52.0 bits (26), Expect = 0.005 Identities = 80/98 (81%) Strand = Plus / Plus Query: 437 ccggcgaacgagaacctcatggagctgctcatcatggtggacgcctgccgccgcgcctcc 496 ||||||||||| |||| ||||| |||||||||||| | || |||| ||||||| |||| Sbjct: 1482393 ccggcgaacgatcacctgatggaactgctcatcatgatcgatgccttccgccgctcctcg 1482452 Query: 497 gccaagaccatcaccgccgtggtgccctacttcggcta 534 ||| |||||||||||| ||||||| |||||||| Sbjct: 1482453 gcccgtcgcatcaccgccgtcctgccctatttcggcta 1482490 Score = 48.1 bits (24), Expect = 0.080 Identities = 33/36 (91%) Strand = Plus / Plus Query: 581 aagctcgtcgccaacctcatcacgcaggccggcgcg 616 |||||||| ||||||||||||||| | ||||||||| Sbjct: 1482537 aagctcgtagccaacctcatcacggaagccggcgcg 1482572
>gb|AE009490.1| Brucella melitensis 16M chromosome I, section 47 of 195 of the complete sequence Length = 11036 Score = 52.0 bits (26), Expect = 0.005 Identities = 80/98 (81%) Strand = Plus / Minus Query: 437 ccggcgaacgagaacctcatggagctgctcatcatggtggacgcctgccgccgcgcctcc 496 ||||||||||| |||| ||||| |||||||||||| | || |||| ||||||| |||| Sbjct: 10636 ccggcgaacgatcacctgatggaactgctcatcatgatcgatgccttccgccgctcctcg 10577 Query: 497 gccaagaccatcaccgccgtggtgccctacttcggcta 534 ||| |||||||||||| ||||||| |||||||| Sbjct: 10576 gcccgtcgcatcaccgccgtcctgccctatttcggcta 10539 Score = 48.1 bits (24), Expect = 0.080 Identities = 33/36 (91%) Strand = Plus / Minus Query: 581 aagctcgtcgccaacctcatcacgcaggccggcgcg 616 |||||||| ||||||||||||||| | ||||||||| Sbjct: 10492 aagctcgtagccaacctcatcacggaagccggcgcg 10457
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Plus Query: 450 acctcatggagctgctcatcatggtggacgcctgccgccgcgcctc 495 |||| ||||| ||||| ||||||||||| || |||||||||||||| Sbjct: 1612264 acctgatggaactgctgatcatggtggatgcttgccgccgcgcctc 1612309
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 52.0 bits (26), Expect = 0.005 Identities = 80/98 (81%) Strand = Plus / Plus Query: 437 ccggcgaacgagaacctcatggagctgctcatcatggtggacgcctgccgccgcgcctcc 496 ||||||||||| |||| ||||| |||||||||||| | || |||| ||||||| |||| Sbjct: 1500456 ccggcgaacgatcacctgatggaactgctcatcatgatcgatgccttccgccgctcctcg 1500515 Query: 497 gccaagaccatcaccgccgtggtgccctacttcggcta 534 ||| |||||||||||| ||||||| |||||||| Sbjct: 1500516 gcccgtcgcatcaccgccgtcctgccctatttcggcta 1500553 Score = 48.1 bits (24), Expect = 0.080 Identities = 33/36 (91%) Strand = Plus / Plus Query: 581 aagctcgtcgccaacctcatcacgcaggccggcgcg 616 |||||||| ||||||||||||||| | ||||||||| Sbjct: 1500600 aagctcgtagccaacctcatcacggaagccggcgcg 1500635
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 52.0 bits (26), Expect = 0.005 Identities = 80/98 (81%) Strand = Plus / Plus Query: 437 ccggcgaacgagaacctcatggagctgctcatcatggtggacgcctgccgccgcgcctcc 496 ||||||||||| |||| ||||| |||||||||||| | || |||| ||||||| |||| Sbjct: 1497610 ccggcgaacgatcacctgatggaactgctcatcatgatcgatgccttccgccgctcctcg 1497669 Query: 497 gccaagaccatcaccgccgtggtgccctacttcggcta 534 ||| |||||||||||| ||||||| |||||||| Sbjct: 1497670 gcccgtcgcatcaccgccgtcctgccctatttcggcta 1497707 Score = 48.1 bits (24), Expect = 0.080 Identities = 33/36 (91%) Strand = Plus / Plus Query: 581 aagctcgtcgccaacctcatcacgcaggccggcgcg 616 |||||||| ||||||||||||||| | ||||||||| Sbjct: 1497754 aagctcgtagccaacctcatcacggaagccggcgcg 1497789
>gb|CP000412.1| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete genome Length = 1856951 Score = 50.1 bits (25), Expect = 0.020 Identities = 64/77 (83%) Strand = Plus / Plus Query: 860 gccgaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtggacgac 919 ||||| || |||||| ||||||| ||||||||||| ||| |||| | || | |||||| Sbjct: 293180 gccgaagtcatgaacatcatcggtgacgtcaagggcaagcgggccatcttgattgacgac 293239 Query: 920 atgatcgacaccgccgg 936 ||||||||||| ||||| Sbjct: 293240 atgatcgacactgccgg 293256
>emb|CR954253.1| Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 complete genome Length = 1864998 Score = 50.1 bits (25), Expect = 0.020 Identities = 64/77 (83%) Strand = Plus / Plus Query: 860 gccgaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtggacgac 919 ||||| || |||||| ||||||| ||||||||||| ||| |||| | || | |||||| Sbjct: 298653 gccgaagtcatgaacatcatcggtgacgtcaagggcaagcgggccatcttgattgacgac 298712 Query: 920 atgatcgacaccgccgg 936 ||||||||||| ||||| Sbjct: 298713 atgatcgacactgccgg 298729
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Minus Query: 752 gtcgtctcccccgacgtcgggggcgtcgccagggcgcgcgccttcgccaagaagctctcc 811 ||||| || ||||||||||| ||||||| | || ||||| |||||||| |||| | Sbjct: 3085627 gtcgtgtcgcccgacgtcggcggcgtcgtgcgcgcccgcgcgctcgccaagcggctcgac 3085568 Query: 812 gacgcgcccctcgccatcgtcgacaagcg 840 ||||||| |||||||||||||||||||| Sbjct: 3085567 aacgcgccgctcgccatcgtcgacaagcg 3085539
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Plus Query: 909 tggtggacgacatgatcgacaccgc 933 ||||||||||||||||||||||||| Sbjct: 468348 tggtggacgacatgatcgacaccgc 468372
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 50.1 bits (25), Expect = 0.020 Identities = 67/81 (82%) Strand = Plus / Plus Query: 760 ccccgacgtcgggggcgtcgccagggcgcgcgccttcgccaagaagctctccgacgcgcc 819 |||||| ||||| ||||||| | | || ||||| |||||||| |||| | ||||||| Sbjct: 2778532 ccccgatgtcggcggcgtcgtccgcgcccgcgcgctcgccaagcggctcgacaacgcgcc 2778591 Query: 820 cctcgccatcgtcgacaagcg 840 |||||||||||||||||||| Sbjct: 2778592 gctcgccatcgtcgacaagcg 2778612 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 485 cgccgcgcctccgccaagaccatcaccgccgtggtgccctacttcggctacgc 537 ||||||||||| |||||| ||||||||||| | ||||| ||||||||||| Sbjct: 2778260 cgccgcgcctcggccaagcggatcaccgccgtaattccctatttcggctacgc 2778312
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 932 gccgggacgatgcacaagggcgcagagctgctg 964 ||||||||||||| |||| |||||||||||||| Sbjct: 346510 gccgggacgatgcgcaagtgcgcagagctgctg 346542
>dbj|AK234873.1| Sus scrofa mRNA, clone:OVRM10025E12, expressed in ovary Length = 1493 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 tcatggagctgctcatcatggtggacgcctgc 484 ||||||||||||| ||||||||| |||||||| Sbjct: 109 tcatggagctgctgatcatggtgtacgcctgc 140
>dbj|AK234753.1| Sus scrofa mRNA, clone:OVRM10013E09, expressed in ovary Length = 1639 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 tcatggagctgctcatcatggtggacgcctgc 484 ||||||||||||| ||||||||| |||||||| Sbjct: 475 tcatggagctgctgatcatggtgtacgcctgc 506
>ref|XM_968252.1| PREDICTED: Tribolium castaneum similar to SH2 domain containing 4B (LOC662135), mRNA Length = 1587 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Minus Query: 31 ctccgcctccatggccacctgcttctgctcct 62 |||||||||| |||||||||||| |||||||| Sbjct: 810 ctccgcctccttggccacctgctgctgctcct 779
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 48.1 bits (24), Expect = 0.080 Identities = 36/40 (90%) Strand = Plus / Minus Query: 576 ccgccaagctcgtcgccaacctcatcacgcaggccggcgc 615 |||||||||| ||||||||||| ||||| || |||||||| Sbjct: 1536812 ccgccaagctggtcgccaacctgatcacccacgccggcgc 1536773
>gb|AC113181.7| Mus musculus chromosome 5, clone RP23-359I6, complete sequence Length = 213684 Score = 48.1 bits (24), Expect = 0.080 Identities = 27/28 (96%) Strand = Plus / Minus Query: 48 cctgcttctgctcctcctcgtccttctc 75 ||||||||||||||||||| |||||||| Sbjct: 135058 cctgcttctgctcctcctcttccttctc 135031
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 48.1 bits (24), Expect = 0.080 Identities = 54/64 (84%) Strand = Plus / Plus Query: 417 tggtgcagccgacctgcccgccggcgaacgagaacctcatggagctgctcatcatggtgg 476 |||||||| | || ||| ||||| | ||||| ||||| ||||| ||||||||||||||| Sbjct: 1791894 tggtgcagtccacttgcgcgccgaccaacgataacctgatggaattgctcatcatggtgg 1791953 Query: 477 acgc 480 |||| Sbjct: 1791954 acgc 1791957
>gb|AC129187.4| Mus musculus BAC clone RP23-427D4 from chromosome 5, complete sequence Length = 198245 Score = 48.1 bits (24), Expect = 0.080 Identities = 27/28 (96%) Strand = Plus / Minus Query: 48 cctgcttctgctcctcctcgtccttctc 75 ||||||||||||||||||| |||||||| Sbjct: 35638 cctgcttctgctcctcctcttccttctc 35611
>gb|BC044179.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2, mRNA (cDNA clone MGC:55477 IMAGE:2640312), complete cds Length = 2292 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 tcatggagctgctcatcatggtggacgcctgc 484 |||||||||||||||| |||||| |||||||| Sbjct: 355 tcatggagctgctcattatggtgtacgcctgc 386
>gb|AF496327.1| Lactobacillus delbrueckii subsp. lactis ribose-phosphate pyrophosphokinase gene, partial cds Length = 714 Score = 48.1 bits (24), Expect = 0.080 Identities = 57/68 (83%) Strand = Plus / Plus Query: 869 atgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtggacgacatgatcgac 928 |||||| ||||||| ||||||||||| ||| |||| | || | ||||||||||||||| Sbjct: 43 atgaacatcatcggtgacgtcaagggcaagcgggccatcttgattgacgacatgatcgac 102 Query: 929 accgccgg 936 || ||||| Sbjct: 103 actgccgg 110
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 48.1 bits (24), Expect = 0.080 Identities = 27/28 (96%) Strand = Plus / Minus Query: 861 ccgaggtgatgaacctcatcggcgacgt 888 |||||||||||||| ||||||||||||| Sbjct: 638566 ccgaggtgatgaacatcatcggcgacgt 638539
>ref|NM_213496.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2 (prpsap2), mRNA gb|BC067543.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2, mRNA (cDNA clone MGC:85610 IMAGE:6523980), complete cds Length = 2352 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 tcatggagctgctcatcatggtggacgcctgc 484 |||||||||||||||| |||||| |||||||| Sbjct: 352 tcatggagctgctcattatggtgtacgcctgc 383
>emb|BX537342.6| Zebrafish DNA sequence from clone CH211-198P11 in linkage group 3, complete sequence Length = 195436 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Minus Query: 453 tcatggagctgctcatcatggtggacgcctgc 484 |||||||||||||||| |||||| |||||||| Sbjct: 10734 tcatggagctgctcattatggtgtacgcctgc 10703
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 46.1 bits (23), Expect = 0.31 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1093 ggaccagcgattcccgcagctcaccgtgctctccgtcgc 1131 |||| |||| |||||||||||||| ||||||||| |||| Sbjct: 5511981 ggacaagcgcttcccgcagctcacggtgctctccatcgc 5512019
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 857 caggccgaggtgatgaacctcatcggc 883 ||||||||||||||||||| ||||||| Sbjct: 3742196 caggccgaggtgatgaaccgcatcggc 3742170
>gb|CP000394.1| Granulibacter bethesdensis CGDNIH1, complete genome Length = 2708355 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 577 cgccaagctcgtcgccaacctcatcac 603 ||||||||| ||||||||||||||||| Sbjct: 2565246 cgccaagctggtcgccaacctcatcac 2565272
>gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome Length = 4412446 Score = 46.1 bits (23), Expect = 0.31 Identities = 50/59 (84%) Strand = Plus / Plus Query: 437 ccggcgaacgagaacctcatggagctgctcatcatggtggacgcctgccgccgcgcctc 495 ||||||||||| |||| ||||| |||||||||||| | ||||| | ||||||| |||| Sbjct: 2306266 ccggcgaacgatcacctgatggaactgctcatcatgatcgacgcattccgccgctcctc 2306324 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgt 888 |||||||||||| ||||||||||||| Sbjct: 2306686 gaggtgatgaacgtcatcggcgacgt 2306711
>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05, complete sequence Length = 129021 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 114 cctctcctcgccgtctccgtcgccgga 140 |||||||||||| |||||||||||||| Sbjct: 102407 cctctcctcgccatctccgtcgccgga 102433
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 857 caggccgaggtgatgaacctcatcggc 883 ||||||||||||||||||| ||||||| Sbjct: 3265419 caggccgaggtgatgaaccgcatcggc 3265393
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 114 cctctcctcgccgtctccgtcgccgga 140 |||||||||||| |||||||||||||| Sbjct: 17227605 cctctcctcgccatctccgtcgccgga 17227631
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 857 caggccgaggtgatgaacctcatcggc 883 ||||||||||||||||||| ||||||| Sbjct: 3866203 caggccgaggtgatgaaccgcatcggc 3866229 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 811 cgacgcgcccctcgccatcgtcgacaagcg 840 |||||||| |||||||||||||||||||| Sbjct: 2160172 cgacgcgcagctcgccatcgtcgacaagcg 2160201
>ref|XM_420906.2| PREDICTED: Gallus gallus similar to glycine transporter GLYT2 (LOC422974), mRNA Length = 2565 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 315 gctacctggggctggagctggg 336 |||||||||||||||||||||| Sbjct: 1497 gctacctggggctggagctggg 1518
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1069 caccaacaccgtgccggtgccg 1090 |||||||||||||||||||||| Sbjct: 1023141 caccaacaccgtgccggtgccg 1023120
>ref|XM_001227969.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10043) mRNA, complete cds Length = 1731 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 ctccggcacggcgaacccgacg 295 |||||||||||||||||||||| Sbjct: 618 ctccggcacggcgaacccgacg 639
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 44.1 bits (22), Expect = 1.2 Identities = 52/62 (83%) Strand = Plus / Plus Query: 398 cgcggcagcgacgtgttcctggtgcagccgacctgcccgccggcgaacgagaacctcatg 457 ||||||| ||||| |||||| | |||||||||||| ||||| | ||||| ||||| ||| Sbjct: 5510495 cgcggcaaggacgtattcctgattcagccgacctgcgcgccgaccaacgacaacctgatg 5510554 Query: 458 ga 459 || Sbjct: 5510555 ga 5510556
>dbj|AK239604.1| Sus scrofa mRNA, clone:THY010115H01, expressed in thymus Length = 2075 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 443 aacgagaacctcatggagctgctcatcatg 472 ||||| ||||| |||||||||||||||||| Sbjct: 309 aacgacaacctgatggagctgctcatcatg 338
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Minus Query: 578 gccaagctcgtcgccaacctcatcacgcaggccggcgc 615 |||||||| ||||||||||| ||||| || |||||||| Sbjct: 1605108 gccaagctggtcgccaacctgatcacccatgccggcgc 1605071
>ref|NM_001017337.3| Xenopus tropicalis phosphoribosyl pyrophosphate synthetase-associated protein 2 (prpsap2), mRNA gb|BC121509.1| Xenopus tropicalis phosphoribosyl pyrophosphate synthetase-associated protein 2, mRNA (cDNA clone MGC:146876 IMAGE:7878142), complete cds Length = 2883 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 453 tcatggagctgctcatcatggtggacgcctgccg 486 ||||||||||||| ||||||||| |||| ||||| Sbjct: 276 tcatggagctgctaatcatggtgtacgcgtgccg 309
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 44.1 bits (22), Expect = 1.2 Identities = 52/62 (83%) Strand = Plus / Plus Query: 398 cgcggcagcgacgtgttcctggtgcagccgacctgcccgccggcgaacgagaacctcatg 457 ||||||| ||||| |||||| | |||||||||||| ||||| | ||||| ||||| ||| Sbjct: 5238552 cgcggcaaggacgtattcctgattcagccgacctgcgcgccgaccaacgacaacctgatg 5238611 Query: 458 ga 459 || Sbjct: 5238612 ga 5238613
>gb|AY659398.1| Synthetic construct Peudomonas aeruginosa clone FLH115794.01F PA4670 gene, partial cds Length = 942 Score = 44.1 bits (22), Expect = 1.2 Identities = 52/62 (83%) Strand = Plus / Plus Query: 398 cgcggcagcgacgtgttcctggtgcagccgacctgcccgccggcgaacgagaacctcatg 457 ||||||| ||||| |||||| | |||||||||||| ||||| | ||||| ||||| ||| Sbjct: 145 cgcggcaaggacgtattcctgattcagccgacctgcgcgccgaccaacgacaacctgatg 204 Query: 458 ga 459 || Sbjct: 205 ga 206
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 cacccccatctccctctcctcg 123 |||||||||||||||||||||| Sbjct: 1906302 cacccccatctccctctcctcg 1906281
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 570 ccatcgccgccaagctcgtcgccaac 595 |||||||||||||||| ||||||||| Sbjct: 4009280 ccatcgccgccaagctggtcgccaac 4009305 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 tccgccaagaccatcaccgcc 514 ||||||||||||||||||||| Sbjct: 3698771 tccgccaagaccatcaccgcc 3698791 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 912 tggacgacatgatcgacaccgccgg 936 ||||||||||| ||||||||||||| Sbjct: 4009613 tggacgacatggtcgacaccgccgg 4009637
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgt 888 |||||||||||| ||||||||||||| Sbjct: 767377 gaggtgatgaacatcatcggcgacgt 767402
>ref|XM_807105.1| Trypanosoma cruzi strain CL Brener phosphoribosylpyrophosphate synthetase (Tc00.1047053506839.80) partial mRNA Length = 1173 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 911 gtggacgacatgatcgacaccgccgggacg 940 |||||||||||||| ||||||| ||||||| Sbjct: 718 gtggacgacatgattgacaccggcgggacg 747
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 909 tggtggacgacatgatcgacac 930 |||||||||||||||||||||| Sbjct: 76468 tggtggacgacatgatcgacac 76489
>ref|XM_557904.1| Anopheles gambiae str. PEST ENSANGP00000027594 (ENSANGG00000021758), mRNA Length = 626 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 367 ggagctgtacgtgcagctgcaggaga 392 |||||||||||||| ||||||||||| Sbjct: 33 ggagctgtacgtgctgctgcaggaga 58
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 859 ggccgaggtgatgaacctcatcggcgacgt 888 |||||| ||||||||| ||||||||||||| Sbjct: 4388570 ggccgaagtgatgaacatcatcggcgacgt 4388541 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 820 cctcgccatcgtcgacaagcg 840 ||||||||||||||||||||| Sbjct: 333375 cctcgccatcgtcgacaagcg 333395 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 914 gacgacatgatcgacaccgcc 934 ||||||||||||||||||||| Sbjct: 4388515 gacgacatgatcgacaccgcc 4388495 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 659 ggctacttcgacatcccggtggaccacgt 687 |||| ||||||||||||||||||| |||| Sbjct: 4388761 ggcttcttcgacatcccggtggacaacgt 4388733
>emb|CR855518.2| Xenopus tropicalis finished cDNA, clone TEgg105n03 Length = 1617 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 453 tcatggagctgctcatcatggtggacgcctgccg 486 ||||||||||||| ||||||||| |||| ||||| Sbjct: 304 tcatggagctgctaatcatggtgtacgcgtgccg 337
>gb|AY609594.1| Sus scrofa clone Clu_20312.scr.msk.p1.Contig2, mRNA sequence Length = 2007 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 443 aacgagaacctcatggagctgctcatcatg 472 ||||| ||||| |||||||||||||||||| Sbjct: 268 aacgacaacctgatggagctgctcatcatg 297
>gb|L11862.1|BLYVATP57A Hordeum vulgare vacuolar ATPase B subunit isoform mRNA, complete cds Length = 1923 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 102 cacccccatctccctctcctcgccgtctcc 131 |||| ||| ||||||||||||||||||||| Sbjct: 10 cacctccacctccctctcctcgccgtctcc 39
>ref|NM_001061196.1| Oryza sativa (japonica cultivar-group) Os05g0149900 (Os05g0149900) mRNA, partial cds Length = 2934 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cctcgccgtctccgtcgccggaggtggag 147 |||||||||| |||||||||||| ||||| Sbjct: 22 cctcgccgtcgccgtcgccggagatggag 50
>ref|NM_001051351.1| Oryza sativa (japonica cultivar-group) Os01g0850800 (Os01g0850800) mRNA, complete cds Length = 1656 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 ggaggtggagctgcagagcgagcag 162 |||||||| |||||||||||||||| Sbjct: 1311 ggaggtggtgctgcagagcgagcag 1335
>ref|XR_019993.1| PREDICTED: Pan troglodytes similar to CGI-107 protein (LOC737401), mRNA Length = 986 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 gctgctgcagccaccaccgga 210 ||||||||||||||||||||| Sbjct: 970 gctgctgcagccaccaccgga 950
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 4.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 505 catcaccgccgtggtgccctacttcggctacgcgcgc 541 ||||||||||| |||||||||||||||| |||||| Sbjct: 391040 catcaccgccgccatgccctacttcggctatgcgcgc 391004
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 15505743 gccacctgcttctgctcctcatcgt 15505719
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1127 gtcgccaacctcctcggcgag 1147 ||||||||||||||||||||| Sbjct: 2784653 gtcgccaacctcctcggcgag 2784633
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 861 ccgaggtgatgaacctcatcggcgacgtc 889 ||||||||||| || |||||||||||||| Sbjct: 891606 ccgaggtgatgcacatcatcggcgacgtc 891578
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 912 tggacgacatgatcgacaccg 932 ||||||||||||||||||||| Sbjct: 304866 tggacgacatgatcgacaccg 304846
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 911 gtggacgacatgatcgacaccgccgggac 939 |||||||||||||||||||| || ||||| Sbjct: 2335659 gtggacgacatgatcgacacggcagggac 2335631
>ref|NM_102972.2| Arabidopsis thaliana lipoate-protein ligase B/ ribose phosphate diphosphokinase (AT1G32380) mRNA, complete cds Length = 1733 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtgga 915 ||||| |||||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 1149 gaggtcatgaacctaatcggtgatgttaaagggaaggtggcagtaatggtgga 1201
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cctcgccgtctccgtcgccggaggtggag 147 |||||||||| |||||||||||| ||||| Sbjct: 70839 cctcgccgtcgccgtcgccggagatggag 70867
>gb|BT015291.1| Drosophila melanogaster GH09363 full insert cDNA Length = 1089 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 569 gccacctgcttctgctcctcatcgt 545
>gb|AE009024.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 50 of 256 of the complete sequence Length = 10029 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 790 cgccttcgccaagaagctctccgac 814 |||||||||||| |||||||||||| Sbjct: 9741 cgccttcgccaacaagctctccgac 9717
>gb|BT012430.1| Drosophila melanogaster RH74182 full insert cDNA Length = 997 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 479 gccacctgcttctgctcctcatcgt 455
>gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, complete sequence Length = 179157 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcc 64 ||||||||||||||||||||| Sbjct: 176282 gccacctgcttctgctcctcc 176262
>gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, complete sequence Length = 170753 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gccacctgcttctgctcctcc 64 ||||||||||||||||||||| Sbjct: 12049 gccacctgcttctgctcctcc 12069
>ref|NM_206371.1| Drosophila melanogaster Ecdysone-induced protein 28/29kD CG7266-RD, transcript variant D (Eip71CD), mRNA Length = 931 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 431 gccacctgcttctgctcctcatcgt 407
>ref|NM_168623.1| Drosophila melanogaster Ecdysone-induced protein 28/29kD CG7266-RC, transcript variant C (Eip71CD), mRNA Length = 1089 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 589 gccacctgcttctgctcctcatcgt 565
>ref|NM_168622.1| Drosophila melanogaster Ecdysone-induced protein 28/29kD CG7266-RB, transcript variant B (Eip71CD), mRNA Length = 966 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 466 gccacctgcttctgctcctcatcgt 442
>ref|NM_079361.2| Drosophila melanogaster Ecdysone-induced protein 28/29kD CG7266-RA, transcript variant A (Eip71CD), mRNA Length = 979 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 479 gccacctgcttctgctcctcatcgt 455
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 790 cgccttcgccaagaagctctccgac 814 |||||||||||| |||||||||||| Sbjct: 545103 cgccttcgccaacaagctctccgac 545079
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 912 tggacgacatgatcgacaccg 932 ||||||||||||||||||||| Sbjct: 371210 tggacgacatgatcgacaccg 371190
>gb|AF311103.5| Homo sapiens chromosome 8 clone SCb-212E3 map p21-p11, complete sequence Length = 234429 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 35 gcctccatggccacctgcttctgctcctc 63 |||||||||| ||||||||||| |||||| Sbjct: 170197 gcctccatggtcacctgcttcttctcctc 170169
>gb|AF541958.1| Drosophila melanogaster methionine-S-sulfoxide reductase (MsrA) mRNA, complete cds Length = 741 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 413 gccacctgcttctgctcctcatcgt 389
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 914 gacgacatgatcgacaccgccgggacgat 942 ||||||||||||||||| ||||| ||||| Sbjct: 4742786 gacgacatgatcgacactgccggcacgat 4742814
>gb|AC163900.3| Mus musculus BAC clone RP23-151K15 from chromosome 12, complete sequence Length = 200606 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 tacctggggctggagctgggg 337 ||||||||||||||||||||| Sbjct: 30426 tacctggggctggagctgggg 30446
>gb|AY125555.1| Arabidopsis thaliana At1g32380/F5D14_5 mRNA, complete cds Length = 1203 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtgga 915 ||||| |||||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 868 gaggtcatgaacctaatcggtgatgttaaagggaaggtggcagtaatggtgga 920
>gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 132655 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 90691 gccacctgcttctgctcctcatcgt 90667
>gb|AC010574.5| Drosophila melanogaster 3L BAC RP98-7L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 162402 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 10400 gccacctgcttctgctcctcatcgt 10376
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 603 cgcaggccggcgcgcaccgcg 623 ||||||||||||||||||||| Sbjct: 2728262 cgcaggccggcgcgcaccgcg 2728242
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 ggaggtggagctgcagagcgagcag 162 |||||||| |||||||||||||||| Sbjct: 36629497 ggaggtggtgctgcagagcgagcag 36629521
>emb|AL139416.5| Human DNA sequence from clone RP4-531M19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ32614), the gene for a novel protein similar to X-linked RNA binding motif protein (RBMX) (DKFZp547N1117), the 3' end of the GBP3 gene for guanylate binding protein 3 and a CpG island, complete sequence Length = 34250 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 gggagctgtacgtgcagctgc 386 ||||||||||||||||||||| Sbjct: 18500 gggagctgtacgtgcagctgc 18520
>gb|AF439851.1|AF439851 Arabidopsis thaliana At1g32380/F5D14_5 mRNA, complete cds Length = 1620 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtgga 915 ||||| |||||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 1149 gaggtcatgaacctaatcggtgatgttaaagggaaggtggcagtaatggtgga 1201
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 cctcgccgtctccgtcgccggaggtggag 147 |||||||||| |||||||||||| ||||| Sbjct: 75036 cctcgccgtcgccgtcgccggagatggag 75008
>gb|AC008875.9| Homo sapiens chromosome 5 clone CTD-2201E18, complete sequence Length = 167100 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 gctgctgcagccaccaccgga 210 ||||||||||||||||||||| Sbjct: 101036 gctgctgcagccaccaccgga 101056
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gacgtgttcctggtgcagccg 427 ||||||||||||||||||||| Sbjct: 8880844 gacgtgttcctggtgcagccg 8880864
>emb|X92974.1|ATPRSII A.thaliana mRNA for phosphoribosyl pyrophosphate synthetase II Length = 1188 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtgga 915 ||||| |||||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 604 gaggtcatgaacctaatcggtgatgttaaagggaaggtggcagtaatggtgga 656
>emb|X58286.1|DMZ60MEX1 Drosophila genes z600, gdl, Eip28/29 and mex1 Length = 9620 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 3846 gccacctgcttctgctcctcatcgt 3822
>emb|X04521.1|DMEIP28R Drosophila melanogaster mRNA for Eip28/29 (ecdysone inducible) Length = 982 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 479 gccacctgcttctgctcctcatcgt 455
>emb|X04024.1|DMEIP28G D.melanogaster Eip28/29 gene for ecdysone-inducible protein 28/29 mapping to chromosomal region 71C3,4-D1,2 Length = 2854 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 2243 gccacctgcttctgctcctcatcgt 2219
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 912 tggacgacatgatcgacaccgccgg 936 ||||||||||| ||||||||||||| Sbjct: 267093 tggacgacatggtcgacaccgccgg 267117
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 912 tggacgacatgatcgacaccgccgg 936 ||||||||||| ||||||||||||| Sbjct: 182410 tggacgacatggtcgacaccgccgg 182434
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 912 tggacgacatgatcgacaccgccgg 936 ||||||||||| ||||||||||||| Sbjct: 199000 tggacgacatggtcgacaccgccgg 198976
>emb|BX571661.1| Wolinella succinogenes, complete genome; segment 5/7 Length = 346613 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 ctcatggagctgctcatcatg 472 ||||||||||||||||||||| Sbjct: 157847 ctcatggagctgctcatcatg 157827
>emb|AL663076.17| Mouse DNA sequence from clone RP23-6I12 on chromosome 11 Contains the 5' end of the gene for a novel protein (1700019F09Rik), the 5' end of the Stx8 gene for syntaxin 8, a pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (Gapd) and a ribosomal protein L31 (Rpl31) pseudogene, complete sequence Length = 206148 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 tgctacctggggctggagctg 334 ||||||||||||||||||||| Sbjct: 28058 tgctacctggggctggagctg 28038
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529H11 Length = 165969 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 ggaggtggagctgcagagcgagcag 162 |||||||| |||||||||||||||| Sbjct: 102763 ggaggtggtgctgcagagcgagcag 102787
>gb|AC035144.3|AC035144 Homo sapiens chromosome 5 clone CTD-2220M12, complete sequence Length = 112626 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tccttctctccacctgacctc 88 ||||||||||||||||||||| Sbjct: 31509 tccttctctccacctgacctc 31529
>gb|BT004857.1| Drosophila melanogaster RE51574 full insert cDNA Length = 980 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccacctgcttctgctcctcctcgt 68 |||||||||||||||||||| |||| Sbjct: 466 gccacctgcttctgctcctcatcgt 442
>gb|AC015971.4| Homo sapiens BAC clone RP11-269K22 from 2, complete sequence Length = 163852 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 tctccctctcctcgccgtctccgtc 134 ||||||||||||| ||||||||||| Sbjct: 124144 tctccctctcctctccgtctccgtc 124168
>dbj|AK119376.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-A09, full insert sequence Length = 2934 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cctcgccgtctccgtcgccggaggtggag 147 |||||||||| |||||||||||| ||||| Sbjct: 22 cctcgccgtcgccgtcgccggagatggag 50
>dbj|AK105677.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B01, full insert sequence Length = 2187 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cctcgccgtctccgtcgccggaggtggag 147 |||||||||| |||||||||||| ||||| Sbjct: 49 cctcgccgtcgccgtcgccggagatggag 77
>gb|AF216794.1|AF216794 Hepatitis C virus isolate SOM3 core structural protein gene, partial cds Length = 573 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 766 cgtcgggggcgtcgccagggc 786 ||||||||||||||||||||| Sbjct: 429 cgtcgggggcgtcgccagggc 449
>gb|AF216792.1|AF216792 Hepatitis C virus isolate SOM1 core structural protein gene, partial cds Length = 573 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 766 cgtcgggggcgtcgccagggc 786 ||||||||||||||||||||| Sbjct: 429 cgtcgggggcgtcgccagggc 449
>dbj|AK101105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025D11, full insert sequence Length = 2264 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cctcgccgtctccgtcgccggaggtggag 147 |||||||||| |||||||||||| ||||| Sbjct: 59 cctcgccgtcgccgtcgccggagatggag 87
>emb|BX816850.1|CNS0ABTH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1482 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtgga 915 ||||| |||||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 1015 gaggtcatgaacctaatcggtgatgttaaagggaaggtggcagtaatggtgga 1067
>emb|BX814463.1|CNS0AC1J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1636 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtgga 915 ||||| |||||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 1130 gaggtcatgaacctaatcggtgatgttaaagggaaggtggcagtaatggtgga 1182
>emb|BX813811.1|CNS0AC35 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB40ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1580 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtgga 915 ||||| |||||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 1088 gaggtcatgaacctaatcggtgatgttaaagggaaggtggcagtaatggtgga 1140
>emb|BX813585.1|CNS0AC2L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1607 Score = 42.1 bits (21), Expect = 4.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 863 gaggtgatgaacctcatcggcgacgtcaaggggaaggtggccgtgatggtgga 915 ||||| |||||||| ||||| || || || ||||||||||| || |||||||| Sbjct: 1122 gaggtcatgaacctaatcggtgatgttaaagggaaggtggcagtaatggtgga 1174
>dbj|AK072901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145E04, full insert sequence Length = 1060 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cctcgccgtctccgtcgccggaggtggag 147 |||||||||| |||||||||||| ||||| Sbjct: 56 cctcgccgtcgccgtcgccggagatggag 84
>dbj|AP002518.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-64D24, complete sequence Length = 164795 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 52 cttctgctcctcctcgtccttctctccac 80 ||||||||||||||| |||| |||||||| Sbjct: 45533 cttctgctcctcctcctcctcctctccac 45505
>gb|AF060568.1|AF060568 Homo sapiens promyelocytic leukemia zinc finger protein (PLZF) gene, complete cds Length = 201239 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 52 cttctgctcctcctcgtccttctctccac 80 ||||||||||||||| |||| |||||||| Sbjct: 199978 cttctgctcctcctcctcctcctctccac 199950
>gb|U95165.1|ATU95165 Agrobacterium tumefaciens FlaD (flaD), FlhB (flhB), FliG (fliG), FliN (fliN), FliM (fliM), MotA (motA), FlgF (flgF), FliI (fliI), FlgB (flgB), FlgC (flgC), FliE (fliE), FlgG (flgG), FlgA (flgA), FlgI (flgI), FlgH (flgH), FliL (fliL), FliP (fliP), FlaA (flaA), FlaB (flaB) and FlaC (flaC) genes, complete cds Length = 21846 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 790 cgccttcgccaagaagctctccgac 814 |||||||||||| |||||||||||| Sbjct: 7902 cgccttcgccaacaagctctccgac 7926
>gb|AC139752.4| Mus musculus BAC clone RP24-258K1 from 12, complete sequence Length = 189312 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 tacctggggctggagctgggg 337 ||||||||||||||||||||| Sbjct: 78741 tacctggggctggagctgggg 78721
>emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chromosome 11, complete sequence Length = 210982 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 cccgctgctgcagccaccacc 207 ||||||||||||||||||||| Sbjct: 56761 cccgctgctgcagccaccacc 56781
>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster Length = 64650 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1068 tcaccaacaccgtgccggtgc 1088 ||||||||||||||||||||| Sbjct: 26751 tcaccaacaccgtgccggtgc 26771 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 181,108,365 Number of extensions: 10749370 Number of successful extensions: 274570 Number of sequences better than 10.0: 144 Number of HSP's gapped: 274558 Number of HSP's successfully gapped: 174 Length of query: 1294 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1271 Effective length of database: 18,503,978,556 Effective search space: 23518556744676 Effective search space used: 23518556744676 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
