ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf62c22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001058783.1| Oryza sativa (japonica cultivar-group) Os04g... 84 1e-12
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-12
3dbj|AK106410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 1e-12
4emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4,... 84 1e-12
5ref|NM_001050019.1| Oryza sativa (japonica cultivar-group) Os01g... 60 2e-05
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 2e-05
7dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic D... 60 2e-05
8dbj|AK109846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 2e-05
9ref|NM_001064214.1| Oryza sativa (japonica cultivar-group) Os06g... 56 3e-04
10ref|NM_001058784.1| Oryza sativa (japonica cultivar-group) Os04g... 56 3e-04
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 3e-04
12dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic D... 56 3e-04
13dbj|AK100900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 3e-04
14dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic D... 54 0.001
15ref|NM_001050009.1| Oryza sativa (japonica cultivar-group) Os01g... 52 0.005
16ref|NM_001050008.1| Oryza sativa (japonica cultivar-group) Os01g... 52 0.005
17dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic D... 52 0.005
18dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.005
19dbj|AK100625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.005
20ref|NM_001050010.1| Oryza sativa (japonica cultivar-group) Os01g... 46 0.30
21dbj|AK107398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.30
22ref|NM_001052610.1| Oryza sativa (japonica cultivar-group) Os02g... 44 1.2
23gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, com... 44 1.2
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
25dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
26dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
27ref|NM_001053416.1| Oryza sativa (japonica cultivar-group) Os02g... 42 4.6
28ref|NM_001076719.1| Danio rerio zgc:153369 (zgc:153369), mRNA >g... 42 4.6
29ref|XM_526160.2| PREDICTED: Pan troglodytes similar to glutamate... 42 4.6
30gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 42 4.6
31gb|AE006688.1| Sulfolobus solfataricus P2 section 47 of 272 of t... 42 4.6
32gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome... 42 4.6
33gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosom... 42 4.6
34gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome... 42 4.6
35ref|XM_537273.2| PREDICTED: Canis familiaris mitochondrial H+ tr... 42 4.6
36ref|XM_847784.1| PREDICTED: Canis familiaris mitochondrial H+ tr... 42 4.6
37ref|XM_861363.1| PREDICTED: Canis familiaris mitochondrial H+ tr... 42 4.6
38emb|BX957325.16| Zebrafish DNA sequence from clone CH211-117O2 i... 42 4.6
39ref|XM_688275.1| PREDICTED: Danio rerio similar to cyclin B3 (LO... 42 4.6
40emb|Y18930.1|SSU18930 Sulfolobus solfataricus 281 kb genomic DNA... 42 4.6
41emb|CR381635.11| Zebrafish DNA sequence from clone DKEY-171C9 in... 42 4.6
42gb|AC006994.4| Homo sapiens BAC clone RP11-396J8 from 2, complet... 42 4.6
43dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.6
44emb|BX537276.5| Zebrafish DNA sequence from clone DKEYP-57A10 in... 42 4.6
45emb|AL356018.5|CNS05TD8 Human chromosome 14 DNA sequence BAC C-2... 42 4.6
46gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 42 4.6 
>ref|NM_001058783.1| Oryza sativa (japonica cultivar-group) Os04g0208500 (Os04g0208500)
           mRNA, complete cds
          Length = 1947
 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 138/170 (81%)
 Strand = Plus / Plus

                                                                       
Query: 35  ctcgtcctcgtcaaccgcccgtggccgctcaacatgcccatccctcccaccttcttcgcc 94
           ||||||||||| |||||||||||||||||| || ||  | ||||  |||||||||||| |
Sbjct: 637 ctcgtcctcgtgaaccgcccgtggccgctcgacctgggcctccccgccaccttcttcggc 696

                                                                       
Query: 95  attgcaacgctcacccgcctgtaccttggcgtcttcgagtttcctgacacgaggaccctc 154
           || || |||||||||||||| ||||| ||| |||   |||| || | ||||     ||||
Sbjct: 697 atggccacgctcacccgcctctacctcggcctctggaagttccccgccacggctgacctc 756

                                                             
Query: 155 ccgcgcgccgcgtcattcccacacctccgcgagctcggcctctgctgcgt 204
           ||||||| ||  || |||||  ||||||||||||||||||||||| ||||
Sbjct: 757 ccgcgcggcgtctcgttccccaacctccgcgagctcggcctctgcagcgt 806



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 310 cagccgcagcctccggtgcgtgcagatcatcg 341
           |||||||||||||||||||| |||||||||||
Sbjct: 909 cagccgcagcctccggtgcgcgcagatcatcg 940
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 138/170 (81%)
 Strand = Plus / Minus

                                                                           
Query: 35      ctcgtcctcgtcaaccgcccgtggccgctcaacatgcccatccctcccaccttcttcgcc 94
               ||||||||||| |||||||||||||||||| || ||  | ||||  |||||||||||| |
Sbjct: 7223991 ctcgtcctcgtgaaccgcccgtggccgctcgacctgggcctccccgccaccttcttcggc 7223932

                                                                           
Query: 95      attgcaacgctcacccgcctgtaccttggcgtcttcgagtttcctgacacgaggaccctc 154
               || || |||||||||||||| ||||| ||| |||   |||| || | ||||     ||||
Sbjct: 7223931 atggccacgctcacccgcctctacctcggcctctggaagttccccgccacggctgacctc 7223872

                                                                 
Query: 155     ccgcgcgccgcgtcattcccacacctccgcgagctcggcctctgctgcgt 204
               ||||||| ||  || |||||  ||||||||||||||||||||||| ||||
Sbjct: 7223871 ccgcgcggcgtctcgttccccaacctccgcgagctcggcctctgcagcgt 7223822



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 310     cagccgcagcctccggtgcgtgcagatcatcg 341
               |||||||||||||||||||| |||||||||||
Sbjct: 7223719 cagccgcagcctccggtgcgcgcagatcatcg 7223688



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 224     gacatggacttcgtcctcaccaggagccctgtgctggaga 263
               |||||||||||||||||| |||||||||| || |||||||
Sbjct: 7228421 gacatggacttcgtcctcgccaggagccccgttctggaga 7228382
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>dbj|AK106410.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H10, full
           insert sequence
          Length = 1947

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 138/170 (81%)
 Strand = Plus / Plus

                                                                       
Query: 35  ctcgtcctcgtcaaccgcccgtggccgctcaacatgcccatccctcccaccttcttcgcc 94
           ||||||||||| |||||||||||||||||| || ||  | ||||  |||||||||||| |
Sbjct: 637 ctcgtcctcgtgaaccgcccgtggccgctcgacctgggcctccccgccaccttcttcggc 696

                                                                       
Query: 95  attgcaacgctcacccgcctgtaccttggcgtcttcgagtttcctgacacgaggaccctc 154
           || || |||||||||||||| ||||| ||| |||   |||| || | ||||     ||||
Sbjct: 697 atggccacgctcacccgcctctacctcggcctctggaagttccccgccacggctgacctc 756

                                                             
Query: 155 ccgcgcgccgcgtcattcccacacctccgcgagctcggcctctgctgcgt 204
           ||||||| ||  || |||||  ||||||||||||||||||||||| ||||
Sbjct: 757 ccgcgcggcgtctcgttccccaacctccgcgagctcggcctctgcagcgt 806



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 310 cagccgcagcctccggtgcgtgcagatcatcg 341
           |||||||||||||||||||| |||||||||||
Sbjct: 909 cagccgcagcctccggtgcgcgcagatcatcg 940
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>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13,
             complete sequence
          Length = 143298

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 138/170 (81%)
 Strand = Plus / Minus

                                                                         
Query: 35    ctcgtcctcgtcaaccgcccgtggccgctcaacatgcccatccctcccaccttcttcgcc 94
             ||||||||||| |||||||||||||||||| || ||  | ||||  |||||||||||| |
Sbjct: 87728 ctcgtcctcgtgaaccgcccgtggccgctcgacctgggcctccccgccaccttcttcggc 87669

                                                                         
Query: 95    attgcaacgctcacccgcctgtaccttggcgtcttcgagtttcctgacacgaggaccctc 154
             || || |||||||||||||| ||||| ||| |||   |||| || | ||||     ||||
Sbjct: 87668 atggccacgctcacccgcctctacctcggcctctggaagttccccgccacggctgacctc 87609

                                                               
Query: 155   ccgcgcgccgcgtcattcccacacctccgcgagctcggcctctgctgcgt 204
             ||||||| ||  || |||||  ||||||||||||||||||||||| ||||
Sbjct: 87608 ccgcgcggcgtctcgttccccaacctccgcgagctcggcctctgcagcgt 87559



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 310   cagccgcagcctccggtgcgtgcagatcatcg 341
             |||||||||||||||||||| |||||||||||
Sbjct: 87456 cagccgcagcctccggtgcgcgcagatcatcg 87425



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 224   gacatggacttcgtcctcaccaggagccctgtgctggaga 263
             |||||||||||||||||| |||||||||| || |||||||
Sbjct: 92158 gacatggacttcgtcctcgccaggagccccgttctggaga 92119
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>ref|NM_001050019.1| Oryza sativa (japonica cultivar-group) Os01g0598400 (Os01g0598400)
           mRNA, complete cds
          Length = 1900

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 39  tcctcgtcaaccgcccgtggccgctcaacatgcc 72
           ||||| ||||||||||||||||||||||||||||
Sbjct: 719 tcctcttcaaccgcccgtggccgctcaacatgcc 752



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 acctccgcgagctcggcctct 197
           |||||||||||||||||||||
Sbjct: 845 acctccgcgagctcggcctct 865
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 39       tcctcgtcaaccgcccgtggccgctcaacatgcc 72
                ||||| ||||||||||||||||||||||||||||
Sbjct: 23507736 tcctcttcaaccgcccgtggccgctcaacatgcc 23507703



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 585      gaggggagcggggcgagctgtccttcctcaagttcgtcctggagag 630
                ||||||||||| |||||||  | |||||||||||| ||||||||||
Sbjct: 23354796 gaggggagcggagcgagctcgcgttcctcaagttcatcctggagag 23354841



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 35       ctcgtcctcgtcaaccgcccgtggccgctc 64
                ||||| ||||||||||||||||||||||||
Sbjct: 23357208 ctcgtgctcgtcaaccgcccgtggccgctc 23357237



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 170      ttcccacacctccgcgagctcggcctctgct 200
                ||||| |||||||| ||||||||||||||||
Sbjct: 23353925 ttcccgcacctccgggagctcggcctctgct 23353955



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 170      ttcccacacctccgcgagctcggcctctgctgcgt 204
                ||||| |||||||| ||||||||||||| ||||||
Sbjct: 23360646 ttcccccacctccgggagctcggcctctactgcgt 23360680



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 177      acctccgcgagctcggcctct 197
                |||||||||||||||||||||
Sbjct: 23507610 acctccgcgagctcggcctct 23507590
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>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025A05
          Length = 154298

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 39    tcctcgtcaaccgcccgtggccgctcaacatgcc 72
             ||||| ||||||||||||||||||||||||||||
Sbjct: 71041 tcctcttcaaccgcccgtggccgctcaacatgcc 71008



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   acctccgcgagctcggcctct 197
             |||||||||||||||||||||
Sbjct: 70915 acctccgcgagctcggcctct 70895
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>dbj|AK109846.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E10, full
           insert sequence
          Length = 1898

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 39  tcctcgtcaaccgcccgtggccgctcaacatgcc 72
           ||||| ||||||||||||||||||||||||||||
Sbjct: 717 tcctcttcaaccgcccgtggccgctcaacatgcc 750



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 acctccgcgagctcggcctct 197
           |||||||||||||||||||||
Sbjct: 843 acctccgcgagctcggcctct 863
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>ref|NM_001064214.1| Oryza sativa (japonica cultivar-group) Os06g0492900 (Os06g0492900)
           mRNA, complete cds
          Length = 1620

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 153 tcccgcgcgccgcgtcattcccacacctccgcgagctcggcctctgct 200
           |||||||||| || || ||||| |||||||| ||||||||||||||||
Sbjct: 656 tcccgcgcgctgcctccttcccccacctccgggagctcggcctctgct 703
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>ref|NM_001058784.1| Oryza sativa (japonica cultivar-group) Os04g0208600 (Os04g0208600)
           mRNA, complete cds
          Length = 1827

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 224 gacatggacttcgtcctcaccaggagccctgtgctggaga 263
           |||||||||||||||||| |||||||||| || |||||||
Sbjct: 779 gacatggacttcgtcctcgccaggagccccgttctggaga 818
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 153      tcccgcgcgccgcgtcattcccacacctccgcgagctcggcctctgct 200
                |||||||||| || || ||||| |||||||| ||||||||||||||||
Sbjct: 16837056 tcccgcgcgctgcctccttcccccacctccgggagctcggcctctgct 16837103



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 170      ttcccacacctccgcgagctcggcctctgct 200
                ||||| |||||||||||||||||||||||||
Sbjct: 16826818 ttcccccacctccgcgagctcggcctctgct 16826848
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>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0025G03
          Length = 139560

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 153   tcccgcgcgccgcgtcattcccacacctccgcgagctcggcctctgct 200
             |||||||||| || || ||||| |||||||| ||||||||||||||||
Sbjct: 67214 tcccgcgcgctgcctccttcccccacctccgggagctcggcctctgct 67261



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 170   ttcccacacctccgcgagctcggcctctgct 200
             ||||| |||||||||||||||||||||||||
Sbjct: 56976 ttcccccacctccgcgagctcggcctctgct 57006
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>dbj|AK100900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131H22, full
           insert sequence
          Length = 1828

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 224 gacatggacttcgtcctcaccaggagccctgtgctggaga 263
           |||||||||||||||||| |||||||||| || |||||||
Sbjct: 780 gacatggacttcgtcctcgccaggagccccgttctggaga 819
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>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664F03
          Length = 184242

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 170    ttcccacacctccgcgagctcggcctctgct 200
              ||||| |||||||||||||||||||||||||
Sbjct: 178305 ttcccccacctccgcgagctcggcctctgct 178335
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>ref|NM_001050009.1| Oryza sativa (japonica cultivar-group) Os01g0596000 (Os01g0596000)
           mRNA, complete cds
          Length = 1512

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 35  ctcgtcctcgtcaaccgcccgtggccgctc 64
           ||||| ||||||||||||||||||||||||
Sbjct: 472 ctcgtgctcgtcaaccgcccgtggccgctc 501
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>ref|NM_001050008.1| Oryza sativa (japonica cultivar-group) Os01g0595900 (Os01g0595900)
            mRNA, complete cds
          Length = 2700

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 585  gaggggagcggggcgagctgtccttcctcaagttcgtcctggagag 630
            ||||||||||| |||||||  | |||||||||||| ||||||||||
Sbjct: 1433 gaggggagcggagcgagctcgcgttcctcaagttcatcctggagag 1478



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 170 ttcccacacctccgcgagctcggcctctgct 200
           ||||| |||||||| ||||||||||||||||
Sbjct: 808 ttcccgcacctccgggagctcggcctctgct 838
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>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1103C09
          Length = 163996

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 585   gaggggagcggggcgagctgtccttcctcaagttcgtcctggagag 630
             ||||||||||| |||||||  | |||||||||||| ||||||||||
Sbjct: 80494 gaggggagcggagcgagctcgcgttcctcaagttcatcctggagag 80539



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 35    ctcgtcctcgtcaaccgcccgtggccgctc 64
             ||||| ||||||||||||||||||||||||
Sbjct: 82906 ctcgtgctcgtcaaccgcccgtggccgctc 82935



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 170   ttcccacacctccgcgagctcggcctctgct 200
             ||||| |||||||| ||||||||||||||||
Sbjct: 79623 ttcccgcacctccgggagctcggcctctgct 79653



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 170   ttcccacacctccgcgagctcggcctctgctgcgt 204
             ||||| |||||||| ||||||||||||| ||||||
Sbjct: 86344 ttcccccacctccgggagctcggcctctactgcgt 86378
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>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0451D05
          Length = 148381

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                            
Query: 585    gaggggagcggggcgagctgtccttcctcaagttcgtcctggagag 630
              ||||||||||| |||||||  | |||||||||||| ||||||||||
Sbjct: 141538 gaggggagcggagcgagctcgcgttcctcaagttcatcctggagag 141583



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 35     ctcgtcctcgtcaaccgcccgtggccgctc 64
              ||||| ||||||||||||||||||||||||
Sbjct: 143950 ctcgtgctcgtcaaccgcccgtggccgctc 143979



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 170    ttcccacacctccgcgagctcggcctctgct 200
              ||||| |||||||| ||||||||||||||||
Sbjct: 140667 ttcccgcacctccgggagctcggcctctgct 140697



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 170    ttcccacacctccgcgagctcggcctctgctgcgt 204
              ||||| |||||||| ||||||||||||| ||||||
Sbjct: 147388 ttcccccacctccgggagctcggcctctactgcgt 147422
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>dbj|AK100625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108J06, full
            insert sequence
          Length = 2701

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 585  gaggggagcggggcgagctgtccttcctcaagttcgtcctggagag 630
            ||||||||||| |||||||  | |||||||||||| ||||||||||
Sbjct: 1434 gaggggagcggagcgagctcgcgttcctcaagttcatcctggagag 1479



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 170 ttcccacacctccgcgagctcggcctctgct 200
           ||||| |||||||| ||||||||||||||||
Sbjct: 809 ttcccgcacctccgggagctcggcctctgct 839
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>ref|NM_001050010.1| Oryza sativa (japonica cultivar-group) Os01g0596100 (Os01g0596100)
           mRNA, complete cds
          Length = 1766

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 170 ttcccacacctccgcgagctcggcctctgctgcgt 204
           ||||| |||||||| ||||||||||||| ||||||
Sbjct: 735 ttcccccacctccgggagctcggcctctactgcgt 769
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>dbj|AK107398.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-D07, full
           insert sequence
          Length = 1766

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 170 ttcccacacctccgcgagctcggcctctgctgcgt 204
           ||||| |||||||| ||||||||||||| ||||||
Sbjct: 735 ttcccccacctccgggagctcggcctctactgcgt 769
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>ref|NM_001052610.1| Oryza sativa (japonica cultivar-group) Os02g0178200 (Os02g0178200)
            mRNA, complete cds
          Length = 1488

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 597  gcgagctgtccttcctcaagttcgtc 622
            ||||||| ||||||||||||||||||
Sbjct: 1196 gcgagctttccttcctcaagttcgtc 1221
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>gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, complete sequence
          Length = 190160

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 298   cctgctcctcctcagccgcagcctcc 323
             ||||||||||||||||| ||||||||
Sbjct: 15611 cctgctcctcctcagcctcagcctcc 15636
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 597     gcgagctgtccttcctcaagttcgtc 622
               ||||||| ||||||||||||||||||
Sbjct: 4323630 gcgagctttccttcctcaagttcgtc 4323655



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 44       gtcaaccgcccgtggccgctc 64
                |||||||||||||||||||||
Sbjct: 17375116 gtcaaccgcccgtggccgctc 17375096
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>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0544B02
          Length = 156339

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 597  gcgagctgtccttcctcaagttcgtc 622
            ||||||| ||||||||||||||||||
Sbjct: 7194 gcgagctttccttcctcaagttcgtc 7219
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>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0504A05
          Length = 148360

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 597    gcgagctgtccttcctcaagttcgtc 622
              ||||||| ||||||||||||||||||
Sbjct: 140444 gcgagctttccttcctcaagttcgtc 140469
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>ref|NM_001053416.1| Oryza sativa (japonica cultivar-group) Os02g0493100 (Os02g0493100)
           mRNA, complete cds
          Length = 1974

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 44  gtcaaccgcccgtggccgctc 64
           |||||||||||||||||||||
Sbjct: 532 gtcaaccgcccgtggccgctc 552
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>ref|NM_001076719.1| Danio rerio zgc:153369 (zgc:153369), mRNA
 gb|BC124332.1| Danio rerio zgc:153369, mRNA (cDNA clone MGC:153369 IMAGE:8105318),
            complete cds
          Length = 1735

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 992  tggcttgtgttttttggtcag 1012
            |||||||||||||||||||||
Sbjct: 1540 tggcttgtgttttttggtcag 1520
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>ref|XM_526160.2| PREDICTED: Pan troglodytes similar to glutamate decarboxylase-like 1
            (LOC470777), mRNA
          Length = 3649

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 213  tgaggcgggaggacatggacttcgtcctc 241
            |||| |||||||||||||||||| |||||
Sbjct: 1598 tgagccgggaggacatggacttcctcctc 1626
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 322    ccggtgcgtgcagatcatcga 342
              |||||||||||||||||||||
Sbjct: 349437 ccggtgcgtgcagatcatcga 349417
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>gb|AE006688.1| Sulfolobus solfataricus P2 section 47 of 272 of the complete genome
          Length = 6701

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1085 tctgtatggtttatttatttt 1105
            |||||||||||||||||||||
Sbjct: 3051 tctgtatggtttatttatttt 3071
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>gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome 1, complete sequence
          Length = 173764

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1089   tatggtttatttattttgctttggc 1113
              |||||||||||||||| ||||||||
Sbjct: 131378 tatggtttatttatttggctttggc 131402
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>gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosome 14, complete
             sequence
          Length = 180645

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 567   tggtcttctacggcttccgag 587
             |||||||||||||||||||||
Sbjct: 69073 tggtcttctacggcttccgag 69093
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>gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome 1, complete sequence
          Length = 177675

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1089   tatggtttatttattttgctttggc 1113
              |||||||||||||||| ||||||||
Sbjct: 143150 tatggtttatttatttggctttggc 143126
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>ref|XM_537273.2| PREDICTED: Canis familiaris mitochondrial H+ transporting ATP
           synthase F1, transcript variant 1 (ATP5A1), mRNA
          Length = 1677

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 301 gctcctcctcagccgcagcctccgg 325
           |||||||| ||||||||||||||||
Sbjct: 57  gctcctccgcagccgcagcctccgg 33
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>ref|XM_847784.1| PREDICTED: Canis familiaris mitochondrial H+ transporting ATP
           synthase F1, transcript variant 2 (ATP5A1), mRNA
          Length = 1671

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 301 gctcctcctcagccgcagcctccgg 325
           |||||||| ||||||||||||||||
Sbjct: 57  gctcctccgcagccgcagcctccgg 33
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>ref|XM_861363.1| PREDICTED: Canis familiaris mitochondrial H+ transporting ATP
           synthase F1, transcript variant 3 (ATP5A1), mRNA
          Length = 591

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 301 gctcctcctcagccgcagcctccgg 325
           |||||||| ||||||||||||||||
Sbjct: 57  gctcctccgcagccgcagcctccgg 33
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>emb|BX957325.16| Zebrafish DNA sequence from clone CH211-117O2 in linkage group 7,
              complete sequence
          Length = 166088

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 992    tggcttgtgttttttggtcag 1012
              |||||||||||||||||||||
Sbjct: 151873 tggcttgtgttttttggtcag 151893
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>ref|XM_688275.1| PREDICTED: Danio rerio similar to cyclin B3 (LOC564956), mRNA
          Length = 918

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 992  tggcttgtgttttttggtcag 1012
            |||||||||||||||||||||
Sbjct: 743  tggcttgtgttttttggtcag 723
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>emb|Y18930.1|SSU18930 Sulfolobus solfataricus 281 kb genomic DNA fragment, strain P2
          Length = 281244

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1085   tctgtatggtttatttatttt 1105
              |||||||||||||||||||||
Sbjct: 213855 tctgtatggtttatttatttt 213835
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>emb|CR381635.11| Zebrafish DNA sequence from clone DKEY-171C9 in linkage group 7,
             complete sequence
          Length = 173058

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 992   tggcttgtgttttttggtcag 1012
             |||||||||||||||||||||
Sbjct: 40392 tggcttgtgttttttggtcag 40412
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>gb|AC006994.4| Homo sapiens BAC clone RP11-396J8 from 2, complete sequence
          Length = 192104

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 918    tctgagttttctaccttttgt 938
              |||||||||||||||||||||
Sbjct: 138215 tctgagttttctaccttttgt 138195
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>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0579G08
          Length = 164452

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     gtcaaccgcccgtggccgctc 64
              |||||||||||||||||||||
Sbjct: 147799 gtcaaccgcccgtggccgctc 147779
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>emb|BX537276.5| Zebrafish DNA sequence from clone DKEYP-57A10 in linkage group 3,
              complete sequence
          Length = 165427

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 717    tgtttgctgcaaaatgggcca 737
              |||||||||||||||||||||
Sbjct: 147937 tgtttgctgcaaaatgggcca 147957
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>emb|AL356018.5|CNS05TD8 Human chromosome 14 DNA sequence BAC C-2277K2 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 121289

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 71     cccatccctcccaccttcttc 91
              |||||||||||||||||||||
Sbjct: 101611 cccatccctcccaccttcttc 101631
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 637     ggcgctgacgaagctggtgat 657
               |||||||||||||||||||||
Sbjct: 1344739 ggcgctgacgaagctggtgat 1344759


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 209,508,322
Number of extensions: 12061144
Number of successful extensions: 221757
Number of sequences better than 10.0: 46
Number of HSP's gapped: 221753
Number of HSP's successfully gapped: 75
Length of query: 1220
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1197
Effective length of database: 18,503,978,556
Effective search space: 22149262331532
Effective search space used: 22149262331532
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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