ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64i11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK061373:Os07g0516200 | 42 | 0.002 | 2 | AK099950:Os11g0562100 | 33 | 1.3 | 3 | AK067451:Os11g0562100 | 33 | 1.3 | 4 | AK066454:Os02g0140200 | 32 | 1.7 | 5 | Os02g0772000:Os02g0772000 | 32 | 2.2 | 6 | AK068026: | 32 | 2.2 | 7 | AK066327: | 32 | 2.2 | 8 | AK111466:Os01g0578800 | 31 | 5.0 | 9 | AF169966:Os02g0139700 | 31 | 5.0 | 10 | AK121211:Os02g0139700 | 31 | 5.0 | 11 | AK106822:Os02g0140400 | 31 | 5.0 | 12 | AK122102:Os08g0487800 | 30 | 8.5 | 13 | Os11g0590900:Os11g0590900 | 30 | 8.5 |
|---|
>AK061373:Os07g0516200 | Length = 180 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/65 (33%), Positives = 36/65 (55%) Frame = +2 Query: 1385 APSCIGPYSQATLYGEILYMAGQLGLDPPTMKLCPGGATAQLELALRNSEAVANAFKSSI 1564 AP+ +GPYSQA +++++G LGL+P T K Q E ++N + A +S Sbjct: 65 APAALGPYSQAIKANNMVFVSGVLGLNPETGKFVSESVEEQTEQVMKNMGEILKASGAS- 123 Query: 1565 FSSAI 1579 +SS + Sbjct: 124 YSSVV 128
>AK099950:Os11g0562100 | Length = 454 Score = 32.7 bits (73), Expect = 1.3 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Frame = +2 Query: 992 YPDTN---VCISKTGKTLFSIGCWIEEPSSASQGMKADLVKV-----LSR--IENQLKDG 1141 Y D N +C+ K L + CW+E+P+S S K L ++ LS ++ Q+ DG Sbjct: 50 YEDENSQYLCLCPVNKALNMVCCWVEDPNSDS--FKRHLARIPDFLWLSEDGMKAQIYDG 107 Query: 1142 GLSWANVLYVHLYISS--MKEFG 1204 SW + + ++ + E+G Sbjct: 108 CQSWETAFIIQAFCATDLVNEYG 130
>AK067451:Os11g0562100 | Length = 762 Score = 32.7 bits (73), Expect = 1.3 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Frame = +2 Query: 992 YPDTN---VCISKTGKTLFSIGCWIEEPSSASQGMKADLVKV-----LSR--IENQLKDG 1141 Y D N +C+ K L + CW+E+P+S S K L ++ LS ++ Q+ DG Sbjct: 358 YEDENSQYLCLCPVNKALNMVCCWVEDPNSDS--FKRHLARIPDFLWLSEDGMKAQIYDG 415 Query: 1142 GLSWANVLYVHLYISS--MKEFG 1204 SW + + ++ + E+G Sbjct: 416 CQSWETAFIIQAFCATDLVNEYG 438
>AK066454:Os02g0140200 | Length = 495 Score = 32.3 bits (72), Expect = 1.7 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 10/76 (13%) Frame = +2 Query: 992 YPDTN---VCISKTGKTLFSIGCWIEEPSSASQGMKADLVKV-----LSR--IENQLKDG 1141 Y D N +CI K L + CW E+P+ S K L +V LS ++ Q+ DG Sbjct: 96 YEDENTQYLCICSVNKALNMVCCWAEDPN--SDAFKRHLARVPDFLWLSEDGMKAQVYDG 153 Query: 1142 GLSWANVLYVHLYISS 1189 SW L + + ++ Sbjct: 154 CQSWETALIIQAFCAT 169
>Os02g0772000:Os02g0772000 | Length = 1031 Score = 32.0 bits (71), Expect = 2.2 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +1 Query: 1993 TITPLKGAFESHGQILRFPARKDPGRQRLHLGRRNDAEVLLFGEARGGSGRD 2148 T+ P GAF S +IL+ P R P + GRR G GG G D Sbjct: 643 TVDPRFGAFRSSARILQSPGRLPPKAPHTNYGRR------FGGRDHGGKGHD 688
>AK068026: | Length = 717 Score = 32.0 bits (71), Expect = 2.2 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 9/75 (12%) Frame = +2 Query: 1007 VCISKTGKTLFSIGCWIEEPSSASQGMKADLVKVLSRI-------ENQLKDGGLSWANVL 1165 +C K L + CWIE+PS S+ K + +V + + Q+ DG W L Sbjct: 321 ICFGGVPKALNILACWIEDPS--SEAFKCHIARVYDYLWIAEDGMKMQIYDGSQVWDAGL 378 Query: 1166 YVHLYISS--MKEFG 1204 V +++ +KE G Sbjct: 379 TVEALVATDLVKELG 393
>AK066327: | Length = 759 Score = 32.0 bits (71), Expect = 2.2 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 9/75 (12%) Frame = +2 Query: 1007 VCISKTGKTLFSIGCWIEEPSSASQGMKADLVKVLSRI-------ENQLKDGGLSWANVL 1165 +C K L + CWIE+PS S+ K + +V + + Q+ DG W L Sbjct: 363 ICFGGVPKALNILACWIEDPS--SEAFKCHIARVYDYLWIAEDGMKMQIYDGSQVWDAGL 420 Query: 1166 YVHLYISS--MKEFG 1204 V +++ +KE G Sbjct: 421 TVEALVATDLVKELG 435
>AK111466:Os01g0578800 | Length = 205 Score = 30.8 bits (68), Expect = 5.0 Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Frame = +3 Query: 243 CTRPSGTRSSSATP-----NAWGCPCSADASPDPRGTTLLSTVLLRAMRWRTCSP--C*A 401 CTR S +SS+T AW P A P P + R W SP C A Sbjct: 44 CTRRSSPAASSSTACGAAAPAWTAPQPTSADPTPSSSPPAPATPPRLPPWSWTSPASCLA 103 Query: 402 R*SGESRPLAPCLRAPSPPI-TRGSGSRAS 488 +G P AP+PPI T +G+ +S Sbjct: 104 PPTGS----WPTCSAPAPPIRTPPAGASSS 129
>AF169966:Os02g0139700 | Length = 757 Score = 30.8 bits (68), Expect = 5.0 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Frame = +2 Query: 992 YPDTN---VCISKTGKTLFSIGCWIEEPSS 1072 Y D N +CI K L + CWIE+P+S Sbjct: 354 YEDENTRYICIGPVNKVLNMLACWIEDPNS 383
>AK121211:Os02g0139700 | Length = 759 Score = 30.8 bits (68), Expect = 5.0 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Frame = +2 Query: 992 YPDTN---VCISKTGKTLFSIGCWIEEPSS 1072 Y D N +CI K L + CWIE+P+S Sbjct: 356 YEDENTRYICIGPVNKVLNMLACWIEDPNS 385
>AK106822:Os02g0140400 | Length = 429 Score = 30.8 bits (68), Expect = 5.0 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 10/76 (13%) Frame = +2 Query: 992 YPDTN---VCISKTGKTLFSIGCWIEEPSSASQGMKADLVKV-----LSR--IENQLKDG 1141 Y D N +CI K L + CW E+P+ S K L +V LS ++ Q+ DG Sbjct: 13 YEDENTQYLCICSVNKALNMVCCWAEDPN--SDAFKQHLARVPDFLWLSEDGMKAQVYDG 70 Query: 1142 GLSWANVLYVHLYISS 1189 SW + + ++ Sbjct: 71 CQSWETAFIIQAFCAT 86
>AK122102:Os08g0487800 | Length = 785 Score = 30.0 bits (66), Expect = 8.5 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 Query: 420 RPLAPCLRAPSPPITRGSGSRASARGWAWSRWLTCGGRI 536 RP A +RAP RGSGS RG W GR+ Sbjct: 18 RPCAGRVRAPGAGAARGSGSARCGRGVRWEAGSGSRGRL 56
>Os11g0590900:Os11g0590900 | Length = 916 Score = 30.0 bits (66), Expect = 8.5 Identities = 27/98 (27%), Positives = 43/98 (43%) Frame = +2 Query: 842 VEPKPGXXXXIGDGAIAEENSSCLYEVNGAIAHTDAGNKQTLNPTPTSDAYPDTNVCISK 1021 +E K I +G + EE+ + +YEV G T+ NK + P D Y DT Sbjct: 436 IEKKSLIWIWIAEGFVHEEHGNKIYEV-GESYFTELINKGMIQPMGY-DIYSDT------ 487 Query: 1022 TGKTLFSIGCWIEEPSSASQGMKADLVKVLSRIENQLK 1135 GC + + M DL+++L+ +EN +K Sbjct: 488 ------FDGCRVHD-------MVLDLIRILTNVENFVK 512 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 75,620,796 Number of extensions: 1802134 Number of successful extensions: 5624 Number of sequences better than 10.0: 13 Number of HSP's gapped: 5621 Number of HSP's successfully gapped: 13 Length of query: 871 Length of database: 15,399,855 Length adjustment: 109 Effective length of query: 762 Effective length of database: 11,035,386 Effective search space: 8408964132 Effective search space used: 8408964132 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
