ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64h23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057556.1| Oryza sativa (japonica cultivar-group) Os03g0704100 (Os03g0704100) mRNA, complete cds Length = 1067 Score = 369 bits (186), Expect = 1e-98 Identities = 444/530 (83%) Strand = Plus / Plus Query: 12 agaaggccgagaggctcaaggcggagctgctggcggccatcgcgccgctcgaccgcggcg 71 ||||||| ||||||||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 300 agaaggcggagaggctcaaggaagagctcctcgccaccatcaggccgctcgaccgcggcg 359 Query: 72 ccgaggccacgcccgaggacaaggaccgcgtcgaccagatcgcgcagcggctggaggagg 131 ||| |||||| | ||||||||||| |||||||| |||| | |||| |||||||||| Sbjct: 360 tcgacgccacggcggaggacaaggagcgcgtcgagaagattgttcagcaactggaggagg 419 Query: 132 tgagcccgaccaaggagccgctcaagtccgagctcctcaacggcaagtgggagctcctct 191 ||| || |||||||| |||||||| || |||||||||||||| |||||||| |||| Sbjct: 420 tgaaccaagtgaaggagccactcaagtctgatctcctcaacggcaaatgggagcttctct 479 Query: 192 acaccacctccacttccattctccagccacagaggccaaagtttctgaggccatacggga 251 |||||||||| ||||| || || |||||||||||||||||||||||||| | |||| Sbjct: 480 acaccacctcagaatccatactgcaaccacagaggccaaagtttctgaggccgtttggga 539 Query: 252 cgatttaccaggcgatcaacaccgacacgctacgagctcaaaacatggaggcactgcctt 311 |||||||||| || ||||| || ||||| || |||| ||||| |||||| | ||| | Sbjct: 540 cgatttaccaagcaatcaatactgacactttaagagcccaaaatatggagacgtggccct 599 Query: 312 acttcaatcaggtcactgccaacttggtgcctctcaactctagaaaagtggcagttaggt 371 | || |||||||| |||||||||||||| |||||||| ||||||| |||||||||| ||| Sbjct: 600 attttaatcaggttactgccaacttggtacctctcaattctagaagagtggcagttcggt 659 Query: 372 ttgattacttcaaaatatttagcctgatccaaatcaaagcacctggaagtggcaaaggtg 431 ||||||||||||||||||||| |||| ||||||||||||||| ||||| ||||||| Sbjct: 660 ttgattacttcaaaatatttaatttgatttcaatcaaagcacctggcagtggtaaaggtg 719 Query: 432 aactagagatcacatatcttgatgaagagctcagggtttcaagaggagacaaggggaact 491 ||||||| || ||||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 720 aactagaaattacatatcttgatgaagagctcagggcctcaagaggcgataaggggaatt 779 Query: 492 tgttcgtgctgaagatggtcgacccattataccgagttccgttgtaataa 541 ||||| | ||||| ||||| |||||| |||| ||||||| ||||||||| Sbjct: 780 tgttcatactgaaaatggttgacccaacatacagagttccattgtaataa 829
>dbj|AK070474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I15, full insert sequence Length = 1068 Score = 369 bits (186), Expect = 1e-98 Identities = 444/530 (83%) Strand = Plus / Plus Query: 12 agaaggccgagaggctcaaggcggagctgctggcggccatcgcgccgctcgaccgcggcg 71 ||||||| ||||||||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 301 agaaggcggagaggctcaaggaagagctcctcgccaccatcaggccgctcgaccgcggcg 360 Query: 72 ccgaggccacgcccgaggacaaggaccgcgtcgaccagatcgcgcagcggctggaggagg 131 ||| |||||| | ||||||||||| |||||||| |||| | |||| |||||||||| Sbjct: 361 tcgacgccacggcggaggacaaggagcgcgtcgagaagattgttcagcaactggaggagg 420 Query: 132 tgagcccgaccaaggagccgctcaagtccgagctcctcaacggcaagtgggagctcctct 191 ||| || |||||||| |||||||| || |||||||||||||| |||||||| |||| Sbjct: 421 tgaaccaagtgaaggagccactcaagtctgatctcctcaacggcaaatgggagcttctct 480 Query: 192 acaccacctccacttccattctccagccacagaggccaaagtttctgaggccatacggga 251 |||||||||| ||||| || || |||||||||||||||||||||||||| | |||| Sbjct: 481 acaccacctcagaatccatactgcaaccacagaggccaaagtttctgaggccgtttggga 540 Query: 252 cgatttaccaggcgatcaacaccgacacgctacgagctcaaaacatggaggcactgcctt 311 |||||||||| || ||||| || ||||| || |||| ||||| |||||| | ||| | Sbjct: 541 cgatttaccaagcaatcaatactgacactttaagagcccaaaatatggagacgtggccct 600 Query: 312 acttcaatcaggtcactgccaacttggtgcctctcaactctagaaaagtggcagttaggt 371 | || |||||||| |||||||||||||| |||||||| ||||||| |||||||||| ||| Sbjct: 601 attttaatcaggttactgccaacttggtacctctcaattctagaagagtggcagttcggt 660 Query: 372 ttgattacttcaaaatatttagcctgatccaaatcaaagcacctggaagtggcaaaggtg 431 ||||||||||||||||||||| |||| ||||||||||||||| ||||| ||||||| Sbjct: 661 ttgattacttcaaaatatttaatttgatttcaatcaaagcacctggcagtggtaaaggtg 720 Query: 432 aactagagatcacatatcttgatgaagagctcagggtttcaagaggagacaaggggaact 491 ||||||| || ||||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 721 aactagaaattacatatcttgatgaagagctcagggcctcaagaggcgataaggggaatt 780 Query: 492 tgttcgtgctgaagatggtcgacccattataccgagttccgttgtaataa 541 ||||| | ||||| ||||| |||||| |||| ||||||| ||||||||| Sbjct: 781 tgttcatactgaaaatggttgacccaacatacagagttccattgtaataa 830
>emb|CT832492.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA020H12, full insert sequence Length = 424 Score = 224 bits (113), Expect = 4e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 317 aatcaggtcactgccaacttggtgcctctcaactctagaaaagtggcagttaggtttgat 376 |||||||| |||||||||||||| |||||||| ||||||| |||||||||| |||||||| Sbjct: 9 aatcaggttactgccaacttggtacctctcaattctagaagagtggcagttcggtttgat 68 Query: 377 tacttcaaaatatttagcctgatccaaatcaaagcacctggaagtggcaaaggtgaacta 436 |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||||| Sbjct: 69 tacttcaaaatatttaatttgatttcaatcaaagcacctggcagtggtaaaggtgaacta 128 Query: 437 gagatcacatatcttgatgaagagctcagggtttcaagaggagacaaggggaacttgttc 496 || || ||||||||||||||||||||||||| |||||||| || |||||||| |||||| Sbjct: 129 gaaattacatatcttgatgaagagctcagggcctcaagaggcgataaggggaatttgttc 188 Query: 497 gtgctgaagatggtcgacccattataccgagttccgttgtaataa 541 | ||||| ||||| |||||| |||| ||||||| ||||||||| Sbjct: 189 atactgaaaatggttgacccaacatacagagttccattgtaataa 233
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 320 caggtcactgccaacttggtgcctctcaactctagaaaagtggcagttaggtttgattac 379 ||||| |||||||||||||| |||||||| ||||||| |||||||||| ||||||||||| Sbjct: 13553 caggttactgccaacttggtacctctcaattctagaagagtggcagttcggtttgattac 13494 Query: 380 ttcaaaatattta 392 ||||||||||||| Sbjct: 13493 ttcaaaatattta 13481 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 403 aatcaaagcacctggaagtggcaaaggtgaactagagatcacatatcttgatgaagagct 462 ||||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 13034 aatcaaagcacctggcagtggtaaaggtgaactagaaattacatatcttgatgaagagct 12975 Query: 463 cagg 466 |||| Sbjct: 12974 cagg 12971 Score = 77.8 bits (39), Expect = 5e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 143 aaggagccgctcaagtccgagctcctcaacggcaagtgggagctcctctacaccacctc 201 |||||||| |||||||| || |||||||||||||| |||||||| |||||||||||||| Sbjct: 14439 aaggagccactcaagtctgatctcctcaacggcaaatgggagcttctctacaccacctc 14381 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 12 agaaggccgagaggctcaaggcggagctgctggcggccatcgcgccgctcgaccgcggcg 71 ||||||| ||||||||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 14668 agaaggcggagaggctcaaggaagagctcctcgccaccatcaggccgctcgaccgcggcg 14609 Query: 72 ccgaggccacgcccgaggacaaggaccgcgtcga 105 ||| |||||| | ||||||||||| |||||||| Sbjct: 14608 tcgacgccacggcggaggacaaggagcgcgtcga 14575 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 221 cagaggccaaagtttctgaggccatacgggacgatttaccaggcgatcaacaccgacacg 280 ||||||||||||||||||||||| | |||||||||||||| || ||||| || ||||| Sbjct: 14222 cagaggccaaagtttctgaggccgtttgggacgatttaccaagcaatcaatactgacact 14163 Query: 281 ctacgagctcaaaacatggag 301 || |||| ||||| |||||| Sbjct: 14162 ttaagagcccaaaatatggag 14142
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 320 caggtcactgccaacttggtgcctctcaactctagaaaagtggcagttaggtttgattac 379 ||||| |||||||||||||| |||||||| ||||||| |||||||||| ||||||||||| Sbjct: 28102797 caggttactgccaacttggtacctctcaattctagaagagtggcagttcggtttgattac 28102856 Query: 380 ttcaaaatattta 392 ||||||||||||| Sbjct: 28102857 ttcaaaatattta 28102869 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 403 aatcaaagcacctggaagtggcaaaggtgaactagagatcacatatcttgatgaagagct 462 ||||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 28103316 aatcaaagcacctggcagtggtaaaggtgaactagaaattacatatcttgatgaagagct 28103375 Query: 463 cagg 466 |||| Sbjct: 28103376 cagg 28103379 Score = 77.8 bits (39), Expect = 5e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 143 aaggagccgctcaagtccgagctcctcaacggcaagtgggagctcctctacaccacctc 201 |||||||| |||||||| || |||||||||||||| |||||||| |||||||||||||| Sbjct: 28101911 aaggagccactcaagtctgatctcctcaacggcaaatgggagcttctctacaccacctc 28101969 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 12 agaaggccgagaggctcaaggcggagctgctggcggccatcgcgccgctcgaccgcggcg 71 ||||||| ||||||||||||| ||||| || || ||||| ||||||||||||||||| Sbjct: 28101682 agaaggcggagaggctcaaggaagagctcctcgccaccatcaggccgctcgaccgcggcg 28101741 Query: 72 ccgaggccacgcccgaggacaaggaccgcgtcga 105 ||| |||||| | ||||||||||| |||||||| Sbjct: 28101742 tcgacgccacggcggaggacaaggagcgcgtcga 28101775 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 221 cagaggccaaagtttctgaggccatacgggacgatttaccaggcgatcaacaccgacacg 280 ||||||||||||||||||||||| | |||||||||||||| || ||||| || ||||| Sbjct: 28102128 cagaggccaaagtttctgaggccgtttgggacgatttaccaagcaatcaatactgacact 28102187 Query: 281 ctacgagctcaaaacatggag 301 || |||| ||||| |||||| Sbjct: 28102188 ttaagagcccaaaatatggag 28102208
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 50.1 bits (25), Expect = 0.012 Identities = 25/25 (100%) Strand = Plus / Minus Query: 70 cgccgaggccacgcccgaggacaag 94 ||||||||||||||||||||||||| Sbjct: 174579 cgccgaggccacgcccgaggacaag 174555
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.048 Identities = 24/24 (100%) Strand = Plus / Plus Query: 71 gccgaggccacgcccgaggacaag 94 |||||||||||||||||||||||| Sbjct: 1155322 gccgaggccacgcccgaggacaag 1155345
>gb|AE005834.1| Caulobacter crescentus CB15 section 160 of 359 of the complete genome Length = 10982 Score = 48.1 bits (24), Expect = 0.048 Identities = 24/24 (100%) Strand = Plus / Plus Query: 71 gccgaggccacgcccgaggacaag 94 |||||||||||||||||||||||| Sbjct: 3291 gccgaggccacgcccgaggacaag 3314
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 48.1 bits (24), Expect = 0.048 Identities = 24/24 (100%) Strand = Plus / Plus Query: 71 gccgaggccacgcccgaggacaag 94 |||||||||||||||||||||||| Sbjct: 121491 gccgaggccacgcccgaggacaag 121514
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 48.1 bits (24), Expect = 0.048 Identities = 24/24 (100%) Strand = Plus / Plus Query: 71 gccgaggccacgcccgaggacaag 94 |||||||||||||||||||||||| Sbjct: 168725 gccgaggccacgcccgaggacaag 168748
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 46.1 bits (23), Expect = 0.19 Identities = 47/55 (85%) Strand = Plus / Plus Query: 463 cagggtttcaagaggagacaaggggaacttgttcgtgctgaagatggtcgaccca 517 |||||||| |||||| |||||| | || ||||| || ||||||||||||||||| Sbjct: 33656 cagggttttaagaggtgacaagagaaagttgtttgtaatgaagatggtcgaccca 33710
>gb|AC102352.9| Mus musculus chromosome 14, clone RP23-30H7, complete sequence Length = 248441 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 tcaaaacatggaggcactgcct 310 |||||||||||||||||||||| Sbjct: 23389 tcaaaacatggaggcactgcct 23368
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 102 tcgaccagatcgcgcagcggctggag 127 ||||||||||||||| |||||||||| Sbjct: 486845 tcgaccagatcgcgcggcggctggag 486870
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 tcgaccagatcgcgcagcggc 122 ||||||||||||||||||||| Sbjct: 5969901 tcgaccagatcgcgcagcggc 5969881
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 cgccgaggccacgcccgaggacaag 94 |||||||||||| |||||||||||| Sbjct: 1118218 cgccgaggccacccccgaggacaag 1118194
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 gatcgcgcagcggctggagga 129 ||||||||||||||||||||| Sbjct: 1692115 gatcgcgcagcggctggagga 1692095
>gb|AC004231.2| Homo sapiens chromosome 17, clone RP5-1110E20, complete sequence Length = 137021 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 tcagggtttcaagaggagaca 482 ||||||||||||||||||||| Sbjct: 124049 tcagggtttcaagaggagaca 124029
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 gaggccacgcccgaggacaag 94 ||||||||||||||||||||| Sbjct: 245457 gaggccacgcccgaggacaag 245437
>gb|AC160023.3| Pan troglodytes BAC clone CH251-556O19 from chromosome unknown, complete sequence Length = 212888 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 aagagctcagggtttcaagag 476 ||||||||||||||||||||| Sbjct: 39375 aagagctcagggtttcaagag 39355
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ccgcggcgccgaggccacgcc 84 ||||||||||||||||||||| Sbjct: 6856161 ccgcggcgccgaggccacgcc 6856181
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence Length = 138518 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 650 tttgagtttaattagtctata 670 ||||||||||||||||||||| Sbjct: 38984 tttgagtttaattagtctata 38964
>gb|AY169814.1| HIV-1 isolate 99USTWLA from USA, complete genome Length = 9186 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tcttgatgaagagctcagggt 468 ||||||||||||||||||||| Sbjct: 8972 tcttgatgaagagctcagggt 8952
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 cgccgaggccacgcccgaggacaag 94 |||||||||||||||||| |||||| Sbjct: 3892363 cgccgaggccacgcccgaagacaag 3892339
>gb|AC090786.6| Homo sapiens chromosome 8, clone RP11-381G11, complete sequence Length = 188274 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 688 gaactgacagaactcagatgt 708 ||||||||||||||||||||| Sbjct: 139880 gaactgacagaactcagatgt 139900
>gb|AC114478.2| Homo sapiens chromosome 3 clone RP11-333K5, complete sequence Length = 158276 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 aagagctcagggtttcaagag 476 ||||||||||||||||||||| Sbjct: 37870 aagagctcagggtttcaagag 37850
>gb|AC160649.2| Pan troglodytes BAC clone CH251-568N12 from chromosome unknown, complete sequence Length = 192241 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 aagagctcagggtttcaagag 476 ||||||||||||||||||||| Sbjct: 112999 aagagctcagggtttcaagag 112979
>gb|AC063977.6| Homo sapiens chromosome 19 clone CTD-3187F8, complete sequence Length = 212752 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 693 gacagaactcagatgtggaca 713 ||||||||||||||||||||| Sbjct: 2565 gacagaactcagatgtggaca 2585
>gb|AC090283.7| Homo sapiens chromosome 17, clone RP11-605F20, complete sequence Length = 168137 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 tcagggtttcaagaggagaca 482 ||||||||||||||||||||| Sbjct: 10815 tcagggtttcaagaggagaca 10795
>gb|AC073429.6| Homo sapiens BAC clone RP11-775H9 from 4, complete sequence Length = 114909 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 aaaggtgaactagagatcacatatc 449 ||||||||||||||||| ||||||| Sbjct: 57972 aaaggtgaactagagataacatatc 57996
>emb|AL356220.12| Human DNA sequence from clone RP11-97H1 on chromosome 10 Contains part of the HPSE2 gene for heparanase 2, complete sequence Length = 139852 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 acctccacttccattctccag 217 ||||||||||||||||||||| Sbjct: 30567 acctccacttccattctccag 30587
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 aggccacgcccgaggacaaggaccgcgtc 103 |||||||| |||||| ||||||||||||| Sbjct: 3925817 aggccacgaccgaggccaaggaccgcgtc 3925845
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggaacgccaagaaggccgaga 23 ||||||||||||||||||||| Sbjct: 2216826 ggaacgccaagaaggccgaga 2216806
>gb|AC011473.4|AC011473 Homo sapiens chromosome 19, BAC BC349142 (CTC-518B2), complete sequence Length = 132323 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 693 gacagaactcagatgtggaca 713 ||||||||||||||||||||| Sbjct: 123484 gacagaactcagatgtggaca 123504
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 aaggcggagctgctggcggcc 49 ||||||||||||||||||||| Sbjct: 1813803 aaggcggagctgctggcggcc 1813823
>gb|AC019254.12| Homo sapiens chromosome 15, clone RP11-424I19, complete sequence Length = 179030 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gcgcagcggctggaggaggtg 133 ||||||||||||||||||||| Sbjct: 124131 gcgcagcggctggaggaggtg 124151
>emb|BX511193.5| Zebrafish DNA sequence from clone DKEY-149J18 in linkage group 18, complete sequence Length = 97603 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 649 gtttgagtttaattagtctat 669 ||||||||||||||||||||| Sbjct: 37968 gtttgagtttaattagtctat 37948
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 cgccgaggccacgcccgaggacaag 94 |||||||||||| |||||||||||| Sbjct: 1039927 cgccgaggccacccccgaggacaag 1039903
>emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-785G15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174273 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 aagagctcagggtttcaagag 476 ||||||||||||||||||||| Sbjct: 5085 aagagctcagggtttcaagag 5105
>emb|AL163953.3|CNS05TBQ Human chromosome 14 DNA sequence BAC R-533L7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162986 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 aagagctcagggtttcaagag 476 ||||||||||||||||||||| Sbjct: 6671 aagagctcagggtttcaagag 6651
>dbj|AB070952.1| Streptomyces avermitilis peptide-3 biosynthetic gene cluster Length = 23451 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 75 aggccacgcccgaggacaaggaccgcgtc 103 |||||||| |||||| ||||||||||||| Sbjct: 17345 aggccacgaccgaggccaaggaccgcgtc 17317 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 129,309,126 Number of extensions: 6906372 Number of successful extensions: 139885 Number of sequences better than 10.0: 40 Number of HSP's gapped: 139878 Number of HSP's successfully gapped: 50 Length of query: 787 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 765 Effective length of database: 18,508,616,841 Effective search space: 14159091883365 Effective search space used: 14159091883365 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
