ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf64h18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q2M3C6:CO027_HUMAN Uncharacterized protein C15orf27 - Homo sapie... 32 4.1

>Q2M3C6:CO027_HUMAN Uncharacterized protein C15orf27 - Homo sapiens (Human)|
          Length = 531
 Score = 32.3 bits (72), Expect = 4.1
 Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
 Frame = +1

Query: 640 PLLSS--FGLSFPT-LDAEETSKLSTPA-QSDVPVLKEAAARPWRSSIDLSLTREERE-- 801
           P +SS  F L  P  L    TS  S  A +S V   +  +++   SS+D S  REE    
Sbjct: 362 PNISSDLFSLDMPLKLGGNGTSATSESASRSSVTRAQSDSSQTLGSSMDCSTAREEPSSE 421

Query: 802 ----------QASVRAAFVQDLLLSTLFRDQ*LRGKPMLPLPWCRLRKVGAPRPSPQM*Y 951
                     Q  V  A VQDLL S+L  D     K + P P  R    G+ + SP++ +
Sbjct: 422 PGPSPPPLPSQQQVEEATVQDLL-SSLSEDPCPSQKALDPAPLARPSPAGSAQTSPELEH 480

Query: 952 PWKIGFGHPSKEG 990
              + F   ++EG
Sbjct: 481 RVSL-FNQKNQEG 492


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 197,061,251
Number of extensions: 4279534
Number of successful extensions: 11680
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11677
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 292
Effective length of database: 68,868,219
Effective search space: 20109519948
Effective search space used: 20109519948
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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