| Clone Name | FLbaf64h18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062854.1| Oryza sativa (japonica cultivar-group) Os05g0562200 (Os05g0562200) mRNA, complete cds Length = 1387 Score = 313 bits (158), Expect = 8e-82 Identities = 248/278 (89%) Strand = Plus / Plus Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 359 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 418 Query: 388 caccccttcgagccccacgccgcgccttgccctatctgttccgaaaaggtttctaaagat 447 ||||||||||||||||| || |||||||||||||| ||||| || ||| || | |||||| Sbjct: 419 caccccttcgagccccatgcggcgccttgccctatatgttctgataagattgcaaaagat 478 Query: 448 atgcttaatcatatcaccatgcaacatgggtacttgttcaagaatcgccgcaggttgcgc 507 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 479 atgcttaatcatatcactgtgcaacatgggtacttgttcaagaatcgtcgcaggttgcgc 538 Query: 508 agatttgctgttccaggcagccagtcgctctctctgctgagccgggatctacgtgaagcc 567 ||||| | | |||||||||| || | || ||| ||||||| || ||||||||||||||| Sbjct: 539 agattcgttattccaggcagtcaagccctatctttgctgagtcgagatctacgtgaagcc 598 Query: 568 catttgcaggtgcttctgggaggtggtgggcataggtc 605 |||||||||||||||||||||||||| || |||||||| Sbjct: 599 catttgcaggtgcttctgggaggtgggggacataggtc 636 Score = 178 bits (90), Expect = 3e-41 Identities = 102/106 (96%) Strand = Plus / Plus Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 230 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 289 Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295 ||||||||||||||||| ||||||||||| ||| |||||||||||| Sbjct: 290 ctcggccacgccgatcgagcggggatggaggaggtggacatggacg 335 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682 |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| ||| Sbjct: 657 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 716 Query: 683 ctgaggaaacatcaaaa 699 | ||||||||||||||| Sbjct: 717 cagaggaaacatcaaaa 733 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 734 taaaagaggcagctgctcggccgtggcggtcaagtattgacttgtccctcacaagggaag 793 |||||||| || |||||| ||| ||| ||||||||||||| |||||||||||||||| Sbjct: 768 taaaagagacacctgctcagccatgggattcaagtattgactcatccctcacaagggaag 827 Query: 794 aaaggga 800 ||||||| Sbjct: 828 aaaggga 834
>dbj|AK109438.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F07, full insert sequence Length = 1324 Score = 313 bits (158), Expect = 8e-82 Identities = 248/278 (89%) Strand = Plus / Plus Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 339 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 398 Query: 388 caccccttcgagccccacgccgcgccttgccctatctgttccgaaaaggtttctaaagat 447 ||||||||||||||||| || |||||||||||||| ||||| || ||| || | |||||| Sbjct: 399 caccccttcgagccccatgcggcgccttgccctatatgttctgataagattgcaaaagat 458 Query: 448 atgcttaatcatatcaccatgcaacatgggtacttgttcaagaatcgccgcaggttgcgc 507 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 459 atgcttaatcatatcactgtgcaacatgggtacttgttcaagaatcgtcgcaggttgcgc 518 Query: 508 agatttgctgttccaggcagccagtcgctctctctgctgagccgggatctacgtgaagcc 567 ||||| | | |||||||||| || | || ||| ||||||| || ||||||||||||||| Sbjct: 519 agattcgttattccaggcagtcaagccctatctttgctgagtcgagatctacgtgaagcc 578 Query: 568 catttgcaggtgcttctgggaggtggtgggcataggtc 605 |||||||||||||||||||||||||| || |||||||| Sbjct: 579 catttgcaggtgcttctgggaggtgggggacataggtc 616 Score = 178 bits (90), Expect = 3e-41 Identities = 102/106 (96%) Strand = Plus / Plus Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 210 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 269 Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295 ||||||||||||||||| ||||||||||| ||| |||||||||||| Sbjct: 270 ctcggccacgccgatcgagcggggatggaggaggtggacatggacg 315 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682 |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| ||| Sbjct: 637 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 696 Query: 683 ctgaggaaacatcaaaa 699 | ||||||||||||||| Sbjct: 697 cagaggaaacatcaaaa 713 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 734 taaaagaggcagctgctcggccgtggcggtcaagtattgacttgtccctcacaagggaag 793 |||||||| || |||||| ||| ||| ||||||||||||| |||||||||||||||| Sbjct: 748 taaaagagacacctgctcagccatgggattcaagtattgactcatccctcacaagggaag 807 Query: 794 aaaggga 800 ||||||| Sbjct: 808 aaaggga 814
>dbj|AK061766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B10, full insert sequence Length = 1387 Score = 313 bits (158), Expect = 8e-82 Identities = 248/278 (89%) Strand = Plus / Plus Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 359 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 418 Query: 388 caccccttcgagccccacgccgcgccttgccctatctgttccgaaaaggtttctaaagat 447 ||||||||||||||||| || |||||||||||||| ||||| || ||| || | |||||| Sbjct: 419 caccccttcgagccccatgcggcgccttgccctatatgttctgataagattgcaaaagat 478 Query: 448 atgcttaatcatatcaccatgcaacatgggtacttgttcaagaatcgccgcaggttgcgc 507 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 479 atgcttaatcatatcactgtgcaacatgggtacttgttcaagaatcgtcgcaggttgcgc 538 Query: 508 agatttgctgttccaggcagccagtcgctctctctgctgagccgggatctacgtgaagcc 567 ||||| | | |||||||||| || | || ||| ||||||| || ||||||||||||||| Sbjct: 539 agattcgttattccaggcagtcaagccctatctttgctgagtcgagatctacgtgaagcc 598 Query: 568 catttgcaggtgcttctgggaggtggtgggcataggtc 605 |||||||||||||||||||||||||| || |||||||| Sbjct: 599 catttgcaggtgcttctgggaggtgggggacataggtc 636 Score = 178 bits (90), Expect = 3e-41 Identities = 102/106 (96%) Strand = Plus / Plus Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 230 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 289 Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295 ||||||||||||||||| ||||||||||| ||| |||||||||||| Sbjct: 290 ctcggccacgccgatcgagcggggatggaggaggtggacatggacg 335 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682 |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| ||| Sbjct: 657 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 716 Query: 683 ctgaggaaacatcaaaa 699 | ||||||||||||||| Sbjct: 717 cagaggaaacatcaaaa 733 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 734 taaaagaggcagctgctcggccgtggcggtcaagtattgacttgtccctcacaagggaag 793 |||||||| || |||||| ||| ||| ||||||||||||| |||||||||||||||| Sbjct: 768 taaaagagacacctgctcagccatgggattcaagtattgactcatccctcacaagggaag 827 Query: 794 aaaggga 800 ||||||| Sbjct: 828 aaaggga 834
>emb|CT830260.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA021C06, full insert sequence Length = 1462 Score = 188 bits (95), Expect = 3e-44 Identities = 173/199 (86%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 533 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 592 Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433 ||||||||||||| ||||||| |||||||||| ||||||| || || ||||| | ||||| Sbjct: 593 acctcgaggaggaccacccctacgagccccacaccgcgccctgtcccatctgcttcgaaa 652 Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493 || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | Sbjct: 653 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 712 Query: 494 gccgcaggttgcgcagatt 512 | |||||| |||||||||| Sbjct: 713 gtcgcaggatgcgcagatt 731 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 357 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 416 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 417 gctcggtcacg 427
>gb|AY105732.1| Zea mays PCO085152 mRNA sequence Length = 1364 Score = 188 bits (95), Expect = 3e-44 Identities = 233/279 (83%) Strand = Plus / Plus Query: 312 caggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgc 371 ||||||||| || ||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 550 caggcccgagttcccctgcccctactgctacgaggaccacgacgtcggatccctctgcgc 609 Query: 372 ccacctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccga 431 ||||| |||||||||||||| ||||| ||||| |||||| | |||||| |||| || || Sbjct: 610 gcacctggaggaggagcacccgttcgaaccccaagccgcggcctgccctgtctgctcaga 669 Query: 432 aaaggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaa 491 | |||| | || |||||| |||| ||||| || | ||||||||| || || |||||||| Sbjct: 670 gatggttacgaaggatatggttaaccatattactacgcaacatggatatttattcaagaa 729 Query: 492 tcgccgcaggttgcgcagatttgctgttccaggcagccagtcgctctctctgctgagccg 551 ||||||| || |||||||||| |||||||||||||| | |||||| |||||||||| Sbjct: 730 tcgccgccggctgcgcagattcatcattccaggcagccaggccctctctttgctgagccg 789 Query: 552 ggatctacgtgaagcccatttgcaggtgcttctgggagg 590 |||||||| |||||||| ||||||||||| || ||||| Sbjct: 790 agatctacgggaagcccacttgcaggtgctcctcggagg 828 Score = 139 bits (70), Expect = 3e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249 |||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct: 437 atggactccgagcactggatctcgcgcctggccgccgcgaagcgcttctacgcggcgcag 496 Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295 ||||||||| ||||||||| |||||||| |||||||| ||||||| Sbjct: 497 ctcggccacagcgatcgggccgggatggatgagctggagatggacg 542 Score = 48.1 bits (24), Expect = 0.075 Identities = 48/56 (85%) Strand = Plus / Plus Query: 800 agcaagccagcgtgagagcggcattcgtgcaagacctgctgctctccaccctattc 855 |||||||| |||| ||||| | |||||||| |||||||||||||| || |||||| Sbjct: 1059 agcaagcccgcgtcagagccacgttcgtgcaggacctgctgctctctactctattc 1114
>ref|NM_001050363.1| Oryza sativa (japonica cultivar-group) Os01g0672400 (Os01g0672400) mRNA, complete cds Length = 1374 Score = 180 bits (91), Expect = 8e-42 Identities = 172/199 (86%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 556 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 615 Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433 ||||||||||||| ||||||| |||||||||| || |||| || || ||||| | ||||| Sbjct: 616 acctcgaggaggaccacccctacgagccccacacctcgccctgtcccatctgcttcgaaa 675 Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493 || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | Sbjct: 676 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 735 Query: 494 gccgcaggttgcgcagatt 512 | |||||| |||||||||| Sbjct: 736 gtcgcaggatgcgcagatt 754 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 380 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 439 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 440 gctcggtcacg 450
>dbj|AK101922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071L05, full insert sequence Length = 1158 Score = 180 bits (91), Expect = 8e-42 Identities = 172/199 (86%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 229 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 288 Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433 ||||||||||||| ||||||| |||||||||| || |||| || || ||||| | ||||| Sbjct: 289 acctcgaggaggaccacccctacgagccccacacctcgccctgtcccatctgcttcgaaa 348 Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493 || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | Sbjct: 349 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 408 Query: 494 gccgcaggttgcgcagatt 512 | |||||| |||||||||| Sbjct: 409 gtcgcaggatgcgcagatt 427 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 53 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 112 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 113 gctcggtcacg 123
>dbj|AK061329.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-A03, full insert sequence Length = 1374 Score = 180 bits (91), Expect = 8e-42 Identities = 172/199 (86%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 556 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 615 Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433 ||||||||||||| ||||||| |||||||||| || |||| || || ||||| | ||||| Sbjct: 616 acctcgaggaggaccacccctacgagccccacacctcgccctgtcccatctgcttcgaaa 675 Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493 || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | Sbjct: 676 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 735 Query: 494 gccgcaggttgcgcagatt 512 | |||||| |||||||||| Sbjct: 736 gtcgcaggatgcgcagatt 754 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 380 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 439 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 440 gctcggtcacg 450
>dbj|AK060901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D08, full insert sequence Length = 1364 Score = 180 bits (91), Expect = 8e-42 Identities = 172/199 (86%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 498 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 557 Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433 ||||||||||||| ||||||| |||||||||| || |||| || || ||||| | ||||| Sbjct: 558 acctcgaggaggaccacccctacgagccccacacctcgccctgtcccatctgcttcgaaa 617 Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493 || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | Sbjct: 618 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 677 Query: 494 gccgcaggttgcgcagatt 512 | |||||| |||||||||| Sbjct: 678 gtcgcaggatgcgcagatt 696 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 322 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 381 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 382 gctcggtcacg 392
>emb|CT831302.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA237G09, full insert sequence Length = 2468 Score = 178 bits (90), Expect = 3e-41 Identities = 102/106 (96%) Strand = Plus / Plus Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 235 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 294 Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295 ||||||||||||||||| ||||||||||| ||| |||||||||||| Sbjct: 295 ctcggccacgccgatcgagcggggatggaggaggtggacatggacg 340 Score = 123 bits (62), Expect = 2e-24 Identities = 104/118 (88%) Strand = Plus / Plus Query: 488 agaatcgccgcaggttgcgcagatttgctgttccaggcagccagtcgctctctctgctga 547 ||||||| ||||||||||||||||| | | |||||||||| || | || ||| |||||| Sbjct: 1714 agaatcgtcgcaggttgcgcagattcgttattccaggcagtcaagccctatctttgctga 1773 Query: 548 gccgggatctacgtgaagcccatttgcaggtgcttctgggaggtggtgggcataggtc 605 | || ||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1774 gtcgagatctacgtgaagcccatttgcaggtgcttctgggaggtgggggacataggtc 1831 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 364 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 423 Query: 388 caccccttcgagcccca 404 ||||||||||||||||| Sbjct: 424 caccccttcgagcccca 440 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682 |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| ||| Sbjct: 1852 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 1911 Query: 683 ctgaggaaacatcaaaa 699 | ||||||||||||||| Sbjct: 1912 cagaggaaacatcaaaa 1928 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 411 gccttgccctatctgttccgaaaaggtttctaaagatatgcttaatcatatcaccatgca 470 |||||||||||| || || || ||| || | ||||||||||||||||||||||| |||| Sbjct: 1482 gccttgccctatatgctctgataagattgcaaaagatatgcttaatcatatcactgtgca 1541 Query: 471 acatgggtacttgttcaag 489 ||||||||||||||||||| Sbjct: 1542 acatgggtacttgttcaag 1560 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 734 taaaagaggcagctgctcggccgtggcggtcaagtattgacttgtccctcacaagggaag 793 |||||||| || |||||| ||| ||| ||||||||||||| |||||||||||||||| Sbjct: 1963 taaaagagacacctgctcagccatgggattcaagtattgactcatccctcacaagggaag 2022 Query: 794 aaaggga 800 ||||||| Sbjct: 2023 aaaggga 2029
>gb|AY105163.1| Zea mays PCO060632 mRNA sequence Length = 1505 Score = 159 bits (80), Expect = 3e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 325 gcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggag 384 |||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||| Sbjct: 577 gcctgcccctactgctacgaggaccatgacgtcgcatccctctgcatccacctcgaggag 636 Query: 385 gagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaaaggtttctaaa 444 || ||||||| |||||||||||||||||| ||||| || || ||| ||| | || | | Sbjct: 637 gaccacccctacgagccccacgccgcgccctgccccatttgctcccaaaggattacaagg 696 Query: 445 gatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaat 492 ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 697 gatatgcttaaccatatcaccatgcaacatggttacttgttcaagaat 744 Score = 111 bits (56), Expect = 6e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| Sbjct: 387 catggactcggagcactggatctcgcgcctggccgccgccaagcgttactacgcggcgca 446 Query: 249 gctcggcc 256 |||||||| Sbjct: 447 gctcggcc 454
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 137 bits (69), Expect = 1e-28 Identities = 72/73 (98%) Strand = Plus / Minus Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 114827 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 114768 Query: 250 ctcggccacgccg 262 ||||||||||||| Sbjct: 114767 ctcggccacgccg 114755 Score = 123 bits (62), Expect = 2e-24 Identities = 104/118 (88%) Strand = Plus / Minus Query: 488 agaatcgccgcaggttgcgcagatttgctgttccaggcagccagtcgctctctctgctga 547 ||||||| ||||||||||||||||| | | |||||||||| || | || ||| |||||| Sbjct: 113215 agaatcgtcgcaggttgcgcagattcgttattccaggcagtcaagccctatctttgctga 113156 Query: 548 gccgggatctacgtgaagcccatttgcaggtgcttctgggaggtggtgggcataggtc 605 | || ||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 113155 gtcgagatctacgtgaagcccatttgcaggtgcttctgggaggtgggggacataggtc 113098 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 114566 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 114507 Query: 388 caccccttcgagcccca 404 ||||||||||||||||| Sbjct: 114506 caccccttcgagcccca 114490 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 411 gccttgccctatctgttccgaaaaggtttctaaagatatgcttaatcatatcaccatgca 470 |||||||||||| ||||| || ||| || | ||||||||||||||||||||||| |||| Sbjct: 113447 gccttgccctatatgttctgataagattgcaaaagatatgcttaatcatatcactgtgca 113388 Query: 471 acatgggtacttgttcaag 489 ||||||||||||||||||| Sbjct: 113387 acatgggtacttgttcaag 113369 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682 |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| ||| Sbjct: 113077 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 113018 Query: 683 ctgaggaaacatcaaaa 699 | ||||||||||||||| Sbjct: 113017 cagaggaaacatcaaaa 113001 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 766 agtattgacttgtccctcacaagggaagaaaggga 800 |||||||||| ||||||||||||||||||||||| Sbjct: 112457 agtattgactcatccctcacaagggaagaaaggga 112423 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Minus Query: 769 attgacttgtccctcacaagggaagaaaggg 799 ||||||| |||||||||||| |||||||||| Sbjct: 102516 attgactcgtccctcacaagtgaagaaaggg 102486 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 262 gatcgggcggggatggacgagctggacatggacg 295 ||||| ||||||||||| ||| |||||||||||| Sbjct: 114623 gatcgagcggggatggaggaggtggacatggacg 114590
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 137 bits (69), Expect = 1e-28 Identities = 72/73 (98%) Strand = Plus / Minus Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 27750269 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 27750210 Query: 250 ctcggccacgccg 262 ||||||||||||| Sbjct: 27750209 ctcggccacgccg 27750197 Score = 123 bits (62), Expect = 2e-24 Identities = 104/118 (88%) Strand = Plus / Minus Query: 488 agaatcgccgcaggttgcgcagatttgctgttccaggcagccagtcgctctctctgctga 547 ||||||| ||||||||||||||||| | | |||||||||| || | || ||| |||||| Sbjct: 27748657 agaatcgtcgcaggttgcgcagattcgttattccaggcagtcaagccctatctttgctga 27748598 Query: 548 gccgggatctacgtgaagcccatttgcaggtgcttctgggaggtggtgggcataggtc 605 | || ||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 27748597 gtcgagatctacgtgaagcccatttgcaggtgcttctgggaggtgggggacataggtc 27748540 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387 ||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||| Sbjct: 27750008 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 27749949 Query: 388 caccccttcgagcccca 404 ||||||||||||||||| Sbjct: 27749948 caccccttcgagcccca 27749932 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 411 gccttgccctatctgttccgaaaaggtttctaaagatatgcttaatcatatcaccatgca 470 |||||||||||| ||||| || ||| || | ||||||||||||||||||||||| |||| Sbjct: 27748889 gccttgccctatatgttctgataagattgcaaaagatatgcttaatcatatcactgtgca 27748830 Query: 471 acatgggtacttgttcaag 489 ||||||||||||||||||| Sbjct: 27748829 acatgggtacttgttcaag 27748811 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682 |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| ||| Sbjct: 27748519 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 27748460 Query: 683 ctgaggaaacatcaaaa 699 | ||||||||||||||| Sbjct: 27748459 cagaggaaacatcaaaa 27748443 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 766 agtattgacttgtccctcacaagggaagaaaggga 800 |||||||||| ||||||||||||||||||||||| Sbjct: 27747899 agtattgactcatccctcacaagggaagaaaggga 27747865 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Minus Query: 769 attgacttgtccctcacaagggaagaaaggg 799 ||||||| |||||||||||| |||||||||| Sbjct: 27737958 attgactcgtccctcacaagtgaagaaaggg 27737928 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 262 gatcgggcggggatggacgagctggacatggacg 295 ||||| ||||||||||| ||| |||||||||||| Sbjct: 27750065 gatcgagcggggatggaggaggtggacatggacg 27750032
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 27595397 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 27595456 Query: 374 acctcgaggaggagcaccccttcgagccccac 405 ||||||||||||| ||||||| |||||||||| Sbjct: 27595457 acctcgaggaggaccacccctacgagccccac 27595488 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 27595124 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 27595183 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 27595184 gctcggtcacg 27595194 Score = 67.9 bits (34), Expect = 8e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 444 agatatgcttaatcatatcaccatgcaacatgggtacttgttcaag 489 ||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 27596674 agatatgttaaatcatatcaccatgcaacatggttacttgttcaag 27596719
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 3963 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 4022 Query: 374 acctcgaggaggagcaccccttcgagccccac 405 ||||||||||||| ||||||| |||||||||| Sbjct: 4023 acctcgaggaggaccacccctacgagccccac 4054 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 3690 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 3749 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 3750 gctcggtcacg 3760 Score = 67.9 bits (34), Expect = 8e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 444 agatatgcttaatcatatcaccatgcaacatgggtacttgttcaag 489 ||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 5240 agatatgttaaatcatatcaccatgcaacatggttacttgttcaag 5285
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 62691 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 62750 Query: 374 acctcgaggaggagcaccccttcgagccccac 405 ||||||||||||| ||||||| |||||||||| Sbjct: 62751 acctcgaggaggaccacccctacgagccccac 62782 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 62418 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 62477 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 62478 gctcggtcacg 62488 Score = 67.9 bits (34), Expect = 8e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 444 agatatgcttaatcatatcaccatgcaacatgggtacttgttcaag 489 ||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 63968 agatatgttaaatcatatcaccatgcaacatggttacttgttcaag 64013
>dbj|AK064817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E14, full insert sequence Length = 2618 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373 |||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 538 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 597 Query: 374 acctcgaggaggagcaccccttcgagccccac 405 ||||||||||||| ||||||| |||||||||| Sbjct: 598 acctcgaggaggaccacccctacgagccccac 629 Score = 109 bits (55), Expect = 2e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct: 362 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 421 Query: 249 gctcggccacg 259 |||||| |||| Sbjct: 422 gctcggtcacg 432 Score = 81.8 bits (41), Expect = 5e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 444 agatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatcgccgcaggtt 503 ||||||| | ||||||||||||||||||||||| ||||||||||||| | | |||||| | Sbjct: 1815 agatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtggtcgcaggat 1874 Query: 504 gcgcagatt 512 ||||||||| Sbjct: 1875 gcgcagatt 1883
>gb|DQ245555.1| Zea mays clone 17429 mRNA sequence Length = 728 Score = 73.8 bits (37), Expect = 1e-09 Identities = 64/73 (87%) Strand = Plus / Plus Query: 518 ttccaggcagccagtcgctctctctgctgagccgggatctacgtgaagcccatttgcagg 577 |||||||||||||| | |||||| ||||||| || |||||||| |||||||| ||||||| Sbjct: 99 ttccaggcagccaggccctctctttgctgagtcgagatctacgggaagcccacttgcagg 158 Query: 578 tgcttctgggagg 590 |||| || ||||| Sbjct: 159 tgctcctcggagg 171 Score = 48.1 bits (24), Expect = 0.075 Identities = 48/56 (85%) Strand = Plus / Plus Query: 800 agcaagccagcgtgagagcggcattcgtgcaagacctgctgctctccaccctattc 855 |||||||| |||| ||||| | |||||||| |||||||||||||| || |||||| Sbjct: 402 agcaagcccgcgtcagagccacgttcgtgcaggacctgctgctctctactctattc 457
>emb|CR753894.12| Mouse DNA sequence from clone RP23-222I6 on chromosome 2, complete sequence Length = 110921 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 ||||||||||||||||||||||||| Sbjct: 101443 tctacctacccatctatctatctac 101467
>gb|AC118721.9| Mus musculus chromosome 8, clone RP24-157I20, complete sequence Length = 161212 Score = 48.1 bits (24), Expect = 0.075 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatcta 182 |||||||||||||||||||||||| Sbjct: 31138 tctacctacccatctatctatcta 31115
>dbj|AK066149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057B07, full insert sequence Length = 3858 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 769 attgacttgtccctcacaagggaagaaaggg 799 ||||||| |||||||||||| |||||||||| Sbjct: 3440 attgactcgtccctcacaagtgaagaaaggg 3470
>gb|AC011311.11| Homo sapiens 3 BAC RP11-525K18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187628 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 431 aaaaggtttctaaagatatgctt 453 ||||||||||||||||||||||| Sbjct: 147411 aaaaggtttctaaagatatgctt 147433
>emb|CR848024.4| Zebrafish DNA sequence from clone CH211-184C11 in linkage group 7, complete sequence Length = 151237 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 ctacctacccatctatctatcta 182 ||||||||||||||||||||||| Sbjct: 133478 ctacctacccatctatctatcta 133500
>gb|AY591673.1| Mus musculus clone IgK4-75 immunoglobulin kappa-like gene, partial sequence Length = 4540 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 153 ctatattctacctacccatctatctatcta 182 |||||||||| ||||| ||||||||||||| Sbjct: 3180 ctatattctatctacctatctatctatcta 3209
>gb|AC121909.3| Mus musculus BAC clone RP24-179L9 from chromosome 5, complete sequence Length = 155771 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatc 180 |||||||||||||||||||||| Sbjct: 2184 tctacctacccatctatctatc 2205
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 431 aaaaggtttctaaagatatgcttaat 456 |||||||||||| ||||||||||||| Sbjct: 11514 aaaaggtttctagagatatgcttaat 11539
>gb|AC158649.6| Mus musculus 6 BAC RP23-279O6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199438 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 153 ctatattctacctacccatctatctatcta 182 |||||||||| ||||| ||||||||||||| Sbjct: 76768 ctatattctatctacctatctatctatcta 76739
>gb|AC021636.16| Homo sapiens chromosome 8, clone RP11-637F16, complete sequence Length = 148687 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatc 180 |||||||||||||||||||||| Sbjct: 17204 tctacctacccatctatctatc 17183
>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence Length = 183319 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 525 cagccagtcgctctctctgctgagcc 550 ||||||||| |||||||||||||||| Sbjct: 86663 cagccagtccctctctctgctgagcc 86638
>gb|AC187030.5| Canis Familiaris chromosome 20, clone XX-21B12, complete sequence Length = 156814 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1151 ctttgcttacaagcattgttt 1171 ||||||||||||||||||||| Sbjct: 22635 ctttgcttacaagcattgttt 22615
>gb|DQ887677.1| Piper cenocladum chloroplast, complete genome Length = 160624 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 gatccgcgcgcggggtcggga 125 ||||||||||||||||||||| Sbjct: 8058 gatccgcgcgcggggtcggga 8078
>ref|NM_001060355.1| Oryza sativa (japonica cultivar-group) Os04g0609200 (Os04g0609200) mRNA, partial cds Length = 1950 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 ttacaagcattgtttttgttg 1177 ||||||||||||||||||||| Sbjct: 567 ttacaagcattgtttttgttg 587
>gb|DQ001084.1| Equus caballus isolate CTNNA2 genomic sequence Length = 740 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 804 agccagcgtgagagcggcatt 824 ||||||||||||||||||||| Sbjct: 636 agccagcgtgagagcggcatt 616
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gcgcagctcggccacgccgat 264 ||||||||||||||||||||| Sbjct: 571319 gcgcagctcggccacgccgat 571299
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1157 ttacaagcattgtttttgttg 1177 ||||||||||||||||||||| Sbjct: 65438 ttacaagcattgtttttgttg 65418
>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete sequence Length = 243701 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 ttctacctacccatctatctatcta 182 ||||||||| ||||||||||||||| Sbjct: 208271 ttctacctatccatctatctatcta 208295
>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence Length = 239046 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1009 tgatgtgggcatgaggtgtcc 1029 ||||||||||||||||||||| Sbjct: 87900 tgatgtgggcatgaggtgtcc 87920
>gb|AC115006.12| Mus musculus chromosome 8, clone RP24-184D21, complete sequence Length = 163874 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 ttctacctacccatctatctatcta 182 ||||||||| ||||||||||||||| Sbjct: 137442 ttctacctatccatctatctatcta 137466
>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence Length = 191726 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 tatattctacctacccatctatctatcta 182 |||| |||||||||| ||||||||||||| Sbjct: 55149 tataatctacctacctatctatctatcta 55177
>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence Length = 178437 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 tatattctacctacccatctatctatcta 182 |||| |||||||||| ||||||||||||| Sbjct: 160488 tataatctacctacctatctatctatcta 160516
>gb|AC114901.8| Mus musculus chromosome 3, clone RP23-33I24, complete sequence Length = 168654 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 97847 tctacctacctatctatctatctac 97823
>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence Length = 197242 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 52082 tctacctacctatctatctatctac 52058
>gb|AC121141.12| Mus musculus chromosome 17, clone RP23-430A11, complete sequence Length = 182218 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 78736 tctatctacccatctatctatctac 78760
>gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, complete sequence Length = 228107 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 155570 tctacctaccaatctatctatctac 155546
>gb|AC120176.7| Mus musculus chromosome 18, clone RP24-494J20, complete sequence Length = 162180 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 acctacccatctatctatcta 182 ||||||||||||||||||||| Sbjct: 28460 acctacccatctatctatcta 28440
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 110 gcgcgcggggtcgggagaggagcggcgcg 138 |||||||||| |||| ||||||||||||| Sbjct: 61849 gcgcgcgggggcgggggaggagcggcgcg 61821
>gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 196424 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 95103 tctacctacctatctatctatctac 95127
>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence Length = 236084 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||||| |||||||||||||||||| Sbjct: 100133 tctacccacccatctatctatctac 100109
>gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosome 14, complete sequence Length = 124918 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 cattagatgctgaggaaacat 694 ||||||||||||||||||||| Sbjct: 54661 cattagatgctgaggaaacat 54681
>gb|AC157944.2| Mus musculus BAC clone RP23-456N8 from chromosome 15, complete sequence Length = 179092 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 ttctacctacccatctatctatcta 182 ||||||||||| ||||||||||||| Sbjct: 177321 ttctacctacctatctatctatcta 177297
>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence Length = 193216 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 154 tatattctacctacccatctatctatcta 182 |||| |||||||||| ||||||||||||| Sbjct: 188336 tataatctacctacctatctatctatcta 188308
>gb|AC113476.20| Mus musculus chromosome 17, clone RP23-304J1, complete sequence Length = 227026 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 ttctacctacccatctatctatcta 182 ||||||||| ||||||||||||||| Sbjct: 198455 ttctacctatccatctatctatcta 198431
>gb|AC105297.35| Mus musculus strain C57BL/6J clone rp23-14k19 map 17, complete sequence Length = 236275 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 151467 tctacctacctatctatctatctac 151491
>gb|AC124368.5| Mus musculus BAC clone RP24-546J13 from chromosome 14, complete sequence Length = 160510 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 ttctacctacccatctatctatcta 182 ||||||||||| ||||||||||||| Sbjct: 97493 ttctacctacctatctatctatcta 97469
>gb|AC124691.4| Mus musculus BAC clone RP24-158O8 from chromosome 15, complete sequence Length = 176829 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 ttctacctacccatctatctatcta 182 ||||||||||| ||||||||||||| Sbjct: 53797 ttctacctacctatctatctatcta 53773
>gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome 13, complete sequence Length = 168858 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 34709 tctatctacccatctatctatctac 34685
>gb|AC125138.4| Mus musculus BAC clone RP24-324N8 from chromosome 5, complete sequence Length = 171978 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 78443 tctacctacctatctatctatctac 78467
>gb|AC124714.4| Mus musculus BAC clone RP24-128K11 from chromosome 1, complete sequence Length = 143929 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 784 acaagggaagaaagggagcaa 804 ||||||||||||||||||||| Sbjct: 118597 acaagggaagaaagggagcaa 118617
>gb|AC122324.4| Mus musculus BAC clone RP23-333I5 from chromosome 3, complete sequence Length = 243378 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 acctacccatctatctatcta 182 ||||||||||||||||||||| Sbjct: 79099 acctacccatctatctatcta 79079
>gb|AC122824.3| Mus musculus BAC clone RP23-206D5 from 13, complete sequence Length = 195655 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 183130 tctatctacccatctatctatctac 183106
>gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, complete sequence Length = 217309 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 acctacccatctatctatcta 182 ||||||||||||||||||||| Sbjct: 10282 acctacccatctatctatcta 10302
>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence Length = 206099 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 82956 tctacctacctatctatctatctac 82980
>gb|AC159970.4| Mus musculus chromosome 3, clone RP23-301J11, complete sequence Length = 191207 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 146735 tctacctacctatctatctatctac 146759
>gb|AC112163.7| Mus Musculus chromosome 13 BAC, clone MGS1-437011 ES cell line, Complete Sequence, complete sequence Length = 159042 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 47158 tctacctacctatctatctatctac 47182
>gb|AC159281.3| Mus musculus BAC clone RP23-321H9 from chromosome 3, complete sequence Length = 229114 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 22378 tctacctacctatctatctatctac 22354
>dbj|AK162958.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330086C01 product:ecotropic viral integration site 2a, full insert sequence Length = 2670 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 2087 tctacctacctatctatctatctac 2111
>ref|NM_077409.2| Caenorhabditis elegans C05A9.1 (p-glycoprotein) mRNA, complete cds Length = 3907 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 720 tgatgtaccagtgctaaaaga 740 ||||||||||||||||||||| Sbjct: 1254 tgatgtaccagtgctaaaaga 1274
>gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete sequence Length = 112570 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 110 gcgcgcggggtcgggagaggagcggcgcg 138 |||||||||| |||| ||||||||||||| Sbjct: 53398 gcgcgcgggggcgggggaggagcggcgcg 53426
>emb|Z70265.1|CEC05A9 Caenorhabditis elegans Cosmid C05A9, complete sequence Length = 34309 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 720 tgatgtaccagtgctaaaaga 740 ||||||||||||||||||||| Sbjct: 31437 tgatgtaccagtgctaaaaga 31417
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1157 ttacaagcattgtttttgttg 1177 ||||||||||||||||||||| Sbjct: 30888863 ttacaagcattgtttttgttg 30888843
>gb|AC026585.9| Homo sapiens, clone RP11-17E3, complete sequence Length = 172798 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||||||| |||||||||||||||| Sbjct: 77887 tctacctatccatctatctatctac 77863
>gb|AC022124.6| Homo sapiens chromosome 5 clone CTD-2075G19, complete sequence Length = 120733 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 154 tatattctacctacccatctatctatcta 182 ||||||||| ||||| ||||||||||||| Sbjct: 33100 tatattctatctacctatctatctatcta 33072
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 cagatttgctgttccaggcag 527 ||||||||||||||||||||| Sbjct: 154873 cagatttgctgttccaggcag 154853
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1157 ttacaagcattgtttttgttg 1177 ||||||||||||||||||||| Sbjct: 156384 ttacaagcattgtttttgttg 156364
>emb|AL591174.13| Mouse DNA sequence from clone RP23-271B20 on chromosome 11, complete sequence Length = 205379 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 175806 tctacctacctatctatctatctac 175830
>gb|AC069294.5|AC069294 Homo sapiens BAC clone RP11-757A13 from 7, complete sequence Length = 123778 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 62941 tctatctacccatctatctatctac 62917
>emb|AL645965.8| Mouse DNA sequence from clone RP23-65I14 on chromosome 11 Contains the 5' end of the gene for a novel protein (330000P08Rik) (Luc7a), the gene for a novel protein (5530600A18Rik), the Abcc3 gene for ATP-binding cassette sub-family C (CFTR/MRP) member 3, the Cacna1g gene for calcium channel voltage-dependent T type alpha 1G subunit, the 3' end of the Tisp78 gene for transcript increased in spermiogenesis 78 and one CpG island, complete sequence Length = 161978 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1010 gatgtgggcatgaggtgtcct 1030 ||||||||||||||||||||| Sbjct: 19367 gatgtgggcatgaggtgtcct 19387
>emb|AL592522.12| Mouse DNA sequence from clone RP23-210M6 on chromosome 11 Contains the genes for two novel 7 transmembrane receptor (rhodopsin family) domain-containing proteins, a high mobility group box 1 (Hmgb1) pseudogene, the Cias1 gene for cold autoinflammatory syndrome 1 homolog (human), a novel gene (4933439C10Rik), the gene for a novel protein (D130067D09), a ribosomal protein L18 (Rpl18) pseudogene, an ariadne homolog 2 (Drosophila) (Arih2) pseudogene, the gene for a novel zinc finger domain-containing protein, the 3' end of the gene for a novel protein and one CpG island, complete sequence Length = 157300 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 74322 tctatctacccatctatctatctac 74298
>gb|AC007502.6| Homo sapiens chromosome 16 clone RP11-98C8, complete sequence Length = 158696 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 52629 tctacctacctatctatctatctac 52605
>gb|AF280107.1|AF280107 Homo sapiens cytochrome P450 polypeptide 43 (CYP3A43) gene, partial cds; cytochrome P450 polypeptide 4 (CYP3A4) and cytochrome P450 polypeptide 7 (CYP3A7) genes, complete cds; and cytochrome P450 polypeptide 5 (CYP3A5) gene, partial cds Length = 174832 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 89663 tctatctacccatctatctatctac 89639
>gb|DQ005611.1| Homo sapiens cytochrome P450, family 3, subfamily A, polypeptide 4 (CYP3A4) gene, complete cds Length = 30035 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 29665 tctatctacccatctatctatctac 29641
>gb|AC154651.2| Mus musculus BAC clone RP24-261K2 from chromosome 9, complete sequence Length = 173354 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 674 cattagatgctgaggaaacat 694 ||||||||||||||||||||| Sbjct: 23319 cattagatgctgaggaaacat 23299
>dbj|AK103652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135D24, full insert sequence Length = 1952 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 ttacaagcattgtttttgttg 1177 ||||||||||||||||||||| Sbjct: 568 ttacaagcattgtttttgttg 588
>gb|AC011449.6|AC011449 Homo sapiens chromosome 19 clone CTC-263F14, complete sequence Length = 120099 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 acctacccatctatctatcta 182 ||||||||||||||||||||| Sbjct: 30569 acctacccatctatctatcta 30589
>gb|AC133467.7| Mus musculus chromosome 5, clone RP24-499N22, complete sequence Length = 173765 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 4536 tctacctacctatctatctatctac 4560
>emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in linkage group 19, complete sequence Length = 200523 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ctacctacccatctatctatc 180 ||||||||||||||||||||| Sbjct: 103932 ctacctacccatctatctatc 103952
>gb|AF009605.1|AF009605 Mus musculus phosphoenolpyruvate carboxykinase (PEPCK) gene, complete cds Length = 12141 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 2791 tctatctacccatctatctatctac 2767
>gb|AC122462.5| Mus musculus BAC clone RP24-294G11 from 3, complete sequence Length = 160501 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 67259 tctacctacctatctatctatctac 67283
>gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complete sequence Length = 177145 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 ttctacctacccatctatctatcta 182 ||||||||| ||||||||||||||| Sbjct: 119518 ttctacctatccatctatctatcta 119494
>emb|CT010497.9| Mouse DNA sequence from clone RP23-239L12 on chromosome 12, complete sequence Length = 189472 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 158012 tctacctacctatctatctatctac 158036
>gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, complete sequence Length = 174162 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 ttctacctacccatctatctatcta 182 ||||||||||| ||||||||||||| Sbjct: 156572 ttctacctacctatctatctatcta 156596
>emb|AL627083.18| Mouse DNA sequence from clone RP23-378E2 on chromosome 4, complete sequence Length = 219379 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 tctacctacccatctatctat 179 ||||||||||||||||||||| Sbjct: 161164 tctacctacccatctatctat 161184
>emb|AL844867.3| Mouse DNA sequence from clone RP23-17B8 on chromosome X, complete sequence Length = 175256 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 ttctacctacccatctatctatcta 182 ||||||||||| ||||||||||||| Sbjct: 80891 ttctacctacctatctatctatcta 80867
>emb|AL772371.3| Mouse DNA sequence from clone RP23-234N12 on chromosome 4, complete sequence Length = 237282 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||||||||| |||||||||||||| Sbjct: 84374 tctacctacctatctatctatctac 84398
>gb|DQ138648.1| Drosophila yakuba strain T33 CG7960 gene, partial cds Length = 492 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 tcgctctctctgctgagccgg 552 ||||||||||||||||||||| Sbjct: 56 tcgctctctctgctgagccgg 36
>gb|DQ138647.1| Drosophila yakuba strain Tai18 CG7960 gene, partial cds Length = 492 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 532 tcgctctctctgctgagccgg 552 ||||||||||||||||||||| Sbjct: 56 tcgctctctctgctgagccgg 36
>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence Length = 206555 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tctacctacccatctatctatctac 183 |||| |||||||||||||||||||| Sbjct: 202486 tctatctacccatctatctatctac 202510
>gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome 12, complete sequence Length = 185710 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1009 tgatgtgggcatgaggtgtcc 1029 ||||||||||||||||||||| Sbjct: 177265 tgatgtgggcatgaggtgtcc 177285 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 186,508,832 Number of extensions: 11003269 Number of successful extensions: 239920 Number of sequences better than 10.0: 99 Number of HSP's gapped: 239917 Number of HSP's successfully gapped: 144 Length of query: 1224 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1201 Effective length of database: 18,503,978,556 Effective search space: 22223278245756 Effective search space used: 22223278245756 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)