ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf64h18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001062854.1| Oryza sativa (japonica cultivar-group) Os05g... 313 8e-82
2dbj|AK109438.2| Oryza sativa (japonica cultivar-group) cDNA clon... 313 8e-82
3dbj|AK061766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 8e-82
4emb|CT830260.1| Oryza sativa (indica cultivar-group) cDNA clone:... 188 3e-44
5gb|AY105732.1| Zea mays PCO085152 mRNA sequence 188 3e-44
6ref|NM_001050363.1| Oryza sativa (japonica cultivar-group) Os01g... 180 8e-42
7dbj|AK101922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 8e-42
8dbj|AK061329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 8e-42
9dbj|AK060901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 8e-42
10emb|CT831302.1| Oryza sativa (indica cultivar-group) cDNA clone:... 178 3e-41
11gb|AY105163.1| Zea mays PCO060632 mRNA sequence 159 3e-35
12gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 137 1e-28
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 137 1e-28
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 6e-21
15dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic D... 111 6e-21
16dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic D... 111 6e-21
17dbj|AK064817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 6e-21
18gb|DQ245555.1| Zea mays clone 17429 mRNA sequence 74 1e-09
19emb|CR753894.12| Mouse DNA sequence from clone RP23-222I6 on chr... 50 0.019
20gb|AC118721.9| Mus musculus chromosome 8, clone RP24-157I20, com... 48 0.075
21dbj|AK066149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.30
22gb|AC011311.11| Homo sapiens 3 BAC RP11-525K18 (Roswell Park Can... 46 0.30
23emb|CR848024.4| Zebrafish DNA sequence from clone CH211-184C11 i... 46 0.30
24gb|AY591673.1| Mus musculus clone IgK4-75 immunoglobulin kappa-l... 44 1.2
25gb|AC121909.3| Mus musculus BAC clone RP24-179L9 from chromosome... 44 1.2
26emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 44 1.2
27gb|AC158649.6| Mus musculus 6 BAC RP23-279O6 (Roswell Park Cance... 44 1.2
28gb|AC021636.16| Homo sapiens chromosome 8, clone RP11-637F16, co... 44 1.2
29gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome... 44 1.2
30gb|AC187030.5| Canis Familiaris chromosome 20, clone XX-21B12, c... 42 4.6
31gb|DQ887677.1| Piper cenocladum chloroplast, complete genome 42 4.6
32ref|NM_001060355.1| Oryza sativa (japonica cultivar-group) Os04g... 42 4.6
33gb|DQ001084.1| Equus caballus isolate CTNNA2 genomic sequence 42 4.6
34gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 42 4.6
35emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 4.6
36gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome... 42 4.6
37gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome... 42 4.6
38gb|AC115006.12| Mus musculus chromosome 8, clone RP24-184D21, co... 42 4.6
39gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, co... 42 4.6
40gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, co... 42 4.6
41gb|AC114901.8| Mus musculus chromosome 3, clone RP23-33I24, comp... 42 4.6
42gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, co... 42 4.6
43gb|AC121141.12| Mus musculus chromosome 17, clone RP23-430A11, c... 42 4.6
44gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, co... 42 4.6
45gb|AC120176.7| Mus musculus chromosome 18, clone RP24-494J20, co... 42 4.6
46gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's ... 42 4.6
47gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hos... 42 4.6
48gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosom... 42 4.6
49gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosom... 42 4.6
50gb|AC157944.2| Mus musculus BAC clone RP23-456N8 from chromosome... 42 4.6
51gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, comp... 42 4.6
52gb|AC113476.20| Mus musculus chromosome 17, clone RP23-304J1, co... 42 4.6
53gb|AC105297.35| Mus musculus strain C57BL/6J clone rp23-14k19 ma... 42 4.6
54gb|AC124368.5| Mus musculus BAC clone RP24-546J13 from chromosom... 42 4.6
55gb|AC124691.4| Mus musculus BAC clone RP24-158O8 from chromosome... 42 4.6
56gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome... 42 4.6
57gb|AC125138.4| Mus musculus BAC clone RP24-324N8 from chromosome... 42 4.6
58gb|AC124714.4| Mus musculus BAC clone RP24-128K11 from chromosom... 42 4.6
59gb|AC122324.4| Mus musculus BAC clone RP23-333I5 from chromosome... 42 4.6
60gb|AC122824.3| Mus musculus BAC clone RP23-206D5 from 13, comple... 42 4.6
61gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, co... 42 4.6
62gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, com... 42 4.6
63gb|AC159970.4| Mus musculus chromosome 3, clone RP23-301J11, com... 42 4.6
64gb|AC112163.7| Mus Musculus chromosome 13 BAC, clone MGS1-437011... 42 4.6
65gb|AC159281.3| Mus musculus BAC clone RP23-321H9 from chromosome... 42 4.6
66dbj|AK162958.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 42 4.6
67ref|NM_077409.2| Caenorhabditis elegans C05A9.1 (p-glycoprotein)... 42 4.6
68gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete seq... 42 4.6
69emb|Z70265.1|CEC05A9 Caenorhabditis elegans Cosmid C05A9, comple... 42 4.6
70dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.6
71gb|AC026585.9| Homo sapiens, clone RP11-17E3, complete sequence 42 4.6
72gb|AC022124.6| Homo sapiens chromosome 5 clone CTD-2075G19, comp... 42 4.6
73emb|BX883045.1| Rattus norvegicus chromosome 20, major histocomp... 42 4.6
74emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4,... 42 4.6
75emb|AL591174.13| Mouse DNA sequence from clone RP23-271B20 on ch... 42 4.6
76gb|AC069294.5|AC069294 Homo sapiens BAC clone RP11-757A13 from 7... 42 4.6
77emb|AL645965.8| Mouse DNA sequence from clone RP23-65I14 on chro... 42 4.6
78emb|AL592522.12| Mouse DNA sequence from clone RP23-210M6 on chr... 42 4.6
79gb|AC007502.6| Homo sapiens chromosome 16 clone RP11-98C8, compl... 42 4.6
80gb|AF280107.1|AF280107 Homo sapiens cytochrome P450 polypeptide ... 42 4.6
81gb|DQ005611.1| Homo sapiens cytochrome P450, family 3, subfamily... 42 4.6
82gb|AC154651.2| Mus musculus BAC clone RP24-261K2 from chromosome... 42 4.6
83dbj|AK103652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.6
84gb|AC011449.6|AC011449 Homo sapiens chromosome 19 clone CTC-263F... 42 4.6
85gb|AC133467.7| Mus musculus chromosome 5, clone RP24-499N22, com... 42 4.6
86emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in ... 42 4.6
87gb|AF009605.1|AF009605 Mus musculus phosphoenolpyruvate carboxyk... 42 4.6
88gb|AC122462.5| Mus musculus BAC clone RP24-294G11 from 3, comple... 42 4.6
89gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complet... 42 4.6
90emb|CT010497.9| Mouse DNA sequence from clone RP23-239L12 on chr... 42 4.6
91gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, compl... 42 4.6
92emb|AL627083.18| Mouse DNA sequence from clone RP23-378E2 on chr... 42 4.6
93emb|AL844867.3| Mouse DNA sequence from clone RP23-17B8 on chrom... 42 4.6
94emb|AL772371.3| Mouse DNA sequence from clone RP23-234N12 on chr... 42 4.6
95gb|DQ138648.1| Drosophila yakuba strain T33 CG7960 gene, partial... 42 4.6
96gb|DQ138647.1| Drosophila yakuba strain Tai18 CG7960 gene, parti... 42 4.6
97gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome... 42 4.6
98gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome ... 42 4.6

>ref|NM_001062854.1| Oryza sativa (japonica cultivar-group) Os05g0562200 (Os05g0562200)
           mRNA, complete cds
          Length = 1387
 Score =  313 bits (158), Expect = 8e-82
 Identities = 248/278 (89%)
 Strand = Plus / Plus

                                                                       
Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387
           ||||||||||||||||||||||||||||||| ||||||   ||| ||||| |||||||||
Sbjct: 359 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 418

                                                                       
Query: 388 caccccttcgagccccacgccgcgccttgccctatctgttccgaaaaggtttctaaagat 447
           ||||||||||||||||| || |||||||||||||| ||||| || ||| || | ||||||
Sbjct: 419 caccccttcgagccccatgcggcgccttgccctatatgttctgataagattgcaaaagat 478

                                                                       
Query: 448 atgcttaatcatatcaccatgcaacatgggtacttgttcaagaatcgccgcaggttgcgc 507
           |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 479 atgcttaatcatatcactgtgcaacatgggtacttgttcaagaatcgtcgcaggttgcgc 538

                                                                       
Query: 508 agatttgctgttccaggcagccagtcgctctctctgctgagccgggatctacgtgaagcc 567
           ||||| | | |||||||||| ||  | || ||| ||||||| || |||||||||||||||
Sbjct: 539 agattcgttattccaggcagtcaagccctatctttgctgagtcgagatctacgtgaagcc 598

                                                 
Query: 568 catttgcaggtgcttctgggaggtggtgggcataggtc 605
           |||||||||||||||||||||||||| || ||||||||
Sbjct: 599 catttgcaggtgcttctgggaggtgggggacataggtc 636



 Score =  178 bits (90), Expect = 3e-41
 Identities = 102/106 (96%)
 Strand = Plus / Plus

                                                                       
Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 230 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 289

                                                         
Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295
           ||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 290 ctcggccacgccgatcgagcggggatggaggaggtggacatggacg 335



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682
           |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||  
Sbjct: 657 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 716

                            
Query: 683 ctgaggaaacatcaaaa 699
           | |||||||||||||||
Sbjct: 717 cagaggaaacatcaaaa 733



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 734 taaaagaggcagctgctcggccgtggcggtcaagtattgacttgtccctcacaagggaag 793
           |||||||| || |||||| ||| |||   |||||||||||||  ||||||||||||||||
Sbjct: 768 taaaagagacacctgctcagccatgggattcaagtattgactcatccctcacaagggaag 827

                  
Query: 794 aaaggga 800
           |||||||
Sbjct: 828 aaaggga 834



to top

>dbj|AK109438.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F07, full
           insert sequence
          Length = 1324

 Score =  313 bits (158), Expect = 8e-82
 Identities = 248/278 (89%)
 Strand = Plus / Plus

                                                                       
Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387
           ||||||||||||||||||||||||||||||| ||||||   ||| ||||| |||||||||
Sbjct: 339 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 398

                                                                       
Query: 388 caccccttcgagccccacgccgcgccttgccctatctgttccgaaaaggtttctaaagat 447
           ||||||||||||||||| || |||||||||||||| ||||| || ||| || | ||||||
Sbjct: 399 caccccttcgagccccatgcggcgccttgccctatatgttctgataagattgcaaaagat 458

                                                                       
Query: 448 atgcttaatcatatcaccatgcaacatgggtacttgttcaagaatcgccgcaggttgcgc 507
           |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 459 atgcttaatcatatcactgtgcaacatgggtacttgttcaagaatcgtcgcaggttgcgc 518

                                                                       
Query: 508 agatttgctgttccaggcagccagtcgctctctctgctgagccgggatctacgtgaagcc 567
           ||||| | | |||||||||| ||  | || ||| ||||||| || |||||||||||||||
Sbjct: 519 agattcgttattccaggcagtcaagccctatctttgctgagtcgagatctacgtgaagcc 578

                                                 
Query: 568 catttgcaggtgcttctgggaggtggtgggcataggtc 605
           |||||||||||||||||||||||||| || ||||||||
Sbjct: 579 catttgcaggtgcttctgggaggtgggggacataggtc 616



 Score =  178 bits (90), Expect = 3e-41
 Identities = 102/106 (96%)
 Strand = Plus / Plus

                                                                       
Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 210 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 269

                                                         
Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295
           ||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 270 ctcggccacgccgatcgagcggggatggaggaggtggacatggacg 315



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682
           |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||  
Sbjct: 637 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 696

                            
Query: 683 ctgaggaaacatcaaaa 699
           | |||||||||||||||
Sbjct: 697 cagaggaaacatcaaaa 713



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 734 taaaagaggcagctgctcggccgtggcggtcaagtattgacttgtccctcacaagggaag 793
           |||||||| || |||||| ||| |||   |||||||||||||  ||||||||||||||||
Sbjct: 748 taaaagagacacctgctcagccatgggattcaagtattgactcatccctcacaagggaag 807

                  
Query: 794 aaaggga 800
           |||||||
Sbjct: 808 aaaggga 814



to top

>dbj|AK061766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B10, full
           insert sequence
          Length = 1387

 Score =  313 bits (158), Expect = 8e-82
 Identities = 248/278 (89%)
 Strand = Plus / Plus

                                                                       
Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387
           ||||||||||||||||||||||||||||||| ||||||   ||| ||||| |||||||||
Sbjct: 359 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 418

                                                                       
Query: 388 caccccttcgagccccacgccgcgccttgccctatctgttccgaaaaggtttctaaagat 447
           ||||||||||||||||| || |||||||||||||| ||||| || ||| || | ||||||
Sbjct: 419 caccccttcgagccccatgcggcgccttgccctatatgttctgataagattgcaaaagat 478

                                                                       
Query: 448 atgcttaatcatatcaccatgcaacatgggtacttgttcaagaatcgccgcaggttgcgc 507
           |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 479 atgcttaatcatatcactgtgcaacatgggtacttgttcaagaatcgtcgcaggttgcgc 538

                                                                       
Query: 508 agatttgctgttccaggcagccagtcgctctctctgctgagccgggatctacgtgaagcc 567
           ||||| | | |||||||||| ||  | || ||| ||||||| || |||||||||||||||
Sbjct: 539 agattcgttattccaggcagtcaagccctatctttgctgagtcgagatctacgtgaagcc 598

                                                 
Query: 568 catttgcaggtgcttctgggaggtggtgggcataggtc 605
           |||||||||||||||||||||||||| || ||||||||
Sbjct: 599 catttgcaggtgcttctgggaggtgggggacataggtc 636



 Score =  178 bits (90), Expect = 3e-41
 Identities = 102/106 (96%)
 Strand = Plus / Plus

                                                                       
Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 230 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 289

                                                         
Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295
           ||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 290 ctcggccacgccgatcgagcggggatggaggaggtggacatggacg 335



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 623 caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682
           |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||  
Sbjct: 657 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 716

                            
Query: 683 ctgaggaaacatcaaaa 699
           | |||||||||||||||
Sbjct: 717 cagaggaaacatcaaaa 733



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 734 taaaagaggcagctgctcggccgtggcggtcaagtattgacttgtccctcacaagggaag 793
           |||||||| || |||||| ||| |||   |||||||||||||  ||||||||||||||||
Sbjct: 768 taaaagagacacctgctcagccatgggattcaagtattgactcatccctcacaagggaag 827

                  
Query: 794 aaaggga 800
           |||||||
Sbjct: 828 aaaggga 834



to top

>emb|CT830260.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA021C06, full
           insert sequence
          Length = 1462

 Score =  188 bits (95), Expect = 3e-44
 Identities = 173/199 (86%)
 Strand = Plus / Plus

                                                                       
Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
           |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 533 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 592

                                                                       
Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433
           ||||||||||||| ||||||| |||||||||| ||||||| || || ||||| | |||||
Sbjct: 593 acctcgaggaggaccacccctacgagccccacaccgcgccctgtcccatctgcttcgaaa 652

                                                                       
Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493
           || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | 
Sbjct: 653 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 712

                              
Query: 494 gccgcaggttgcgcagatt 512
           | |||||| ||||||||||
Sbjct: 713 gtcgcaggatgcgcagatt 731



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
           ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 357 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 416

                      
Query: 249 gctcggccacg 259
           |||||| ||||
Sbjct: 417 gctcggtcacg 427



to top

>gb|AY105732.1| Zea mays PCO085152 mRNA sequence
          Length = 1364

 Score =  188 bits (95), Expect = 3e-44
 Identities = 233/279 (83%)
 Strand = Plus / Plus

                                                                       
Query: 312 caggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgc 371
           ||||||||| ||  |||||||||||||||||||||||||||||||||  |||||   |||
Sbjct: 550 caggcccgagttcccctgcccctactgctacgaggaccacgacgtcggatccctctgcgc 609

                                                                       
Query: 372 ccacctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccga 431
            ||||| |||||||||||||| ||||| ||||| |||||| | |||||| |||| || ||
Sbjct: 610 gcacctggaggaggagcacccgttcgaaccccaagccgcggcctgccctgtctgctcaga 669

                                                                       
Query: 432 aaaggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaa 491
            | |||| | || |||||| |||| ||||| || | ||||||||| || || ||||||||
Sbjct: 670 gatggttacgaaggatatggttaaccatattactacgcaacatggatatttattcaagaa 729

                                                                       
Query: 492 tcgccgcaggttgcgcagatttgctgttccaggcagccagtcgctctctctgctgagccg 551
           ||||||| || ||||||||||     |||||||||||||| | |||||| ||||||||||
Sbjct: 730 tcgccgccggctgcgcagattcatcattccaggcagccaggccctctctttgctgagccg 789

                                                  
Query: 552 ggatctacgtgaagcccatttgcaggtgcttctgggagg 590
            |||||||| |||||||| ||||||||||| || |||||
Sbjct: 790 agatctacgggaagcccacttgcaggtgctcctcggagg 828



 Score =  139 bits (70), Expect = 3e-29
 Identities = 97/106 (91%)
 Strand = Plus / Plus

                                                                       
Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249
           |||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 437 atggactccgagcactggatctcgcgcctggccgccgcgaagcgcttctacgcggcgcag 496

                                                         
Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295
           |||||||||  ||||||||| |||||||| |||||||| |||||||
Sbjct: 497 ctcggccacagcgatcgggccgggatggatgagctggagatggacg 542



 Score = 48.1 bits (24), Expect = 0.075
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 800  agcaagccagcgtgagagcggcattcgtgcaagacctgctgctctccaccctattc 855
            |||||||| |||| |||||  | |||||||| |||||||||||||| || ||||||
Sbjct: 1059 agcaagcccgcgtcagagccacgttcgtgcaggacctgctgctctctactctattc 1114



to top

>ref|NM_001050363.1| Oryza sativa (japonica cultivar-group) Os01g0672400 (Os01g0672400)
           mRNA, complete cds
          Length = 1374

 Score =  180 bits (91), Expect = 8e-42
 Identities = 172/199 (86%)
 Strand = Plus / Plus

                                                                       
Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
           |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 556 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 615

                                                                       
Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433
           ||||||||||||| ||||||| |||||||||| || |||| || || ||||| | |||||
Sbjct: 616 acctcgaggaggaccacccctacgagccccacacctcgccctgtcccatctgcttcgaaa 675

                                                                       
Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493
           || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | 
Sbjct: 676 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 735

                              
Query: 494 gccgcaggttgcgcagatt 512
           | |||||| ||||||||||
Sbjct: 736 gtcgcaggatgcgcagatt 754



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
           ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 380 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 439

                      
Query: 249 gctcggccacg 259
           |||||| ||||
Sbjct: 440 gctcggtcacg 450



to top

>dbj|AK101922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071L05, full
           insert sequence
          Length = 1158

 Score =  180 bits (91), Expect = 8e-42
 Identities = 172/199 (86%)
 Strand = Plus / Plus

                                                                       
Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
           |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 229 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 288

                                                                       
Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433
           ||||||||||||| ||||||| |||||||||| || |||| || || ||||| | |||||
Sbjct: 289 acctcgaggaggaccacccctacgagccccacacctcgccctgtcccatctgcttcgaaa 348

                                                                       
Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493
           || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | 
Sbjct: 349 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 408

                              
Query: 494 gccgcaggttgcgcagatt 512
           | |||||| ||||||||||
Sbjct: 409 gtcgcaggatgcgcagatt 427



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
           ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 53  catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 112

                      
Query: 249 gctcggccacg 259
           |||||| ||||
Sbjct: 113 gctcggtcacg 123



to top

>dbj|AK061329.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-A03, full
           insert sequence
          Length = 1374

 Score =  180 bits (91), Expect = 8e-42
 Identities = 172/199 (86%)
 Strand = Plus / Plus

                                                                       
Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
           |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 556 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 615

                                                                       
Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433
           ||||||||||||| ||||||| |||||||||| || |||| || || ||||| | |||||
Sbjct: 616 acctcgaggaggaccacccctacgagccccacacctcgccctgtcccatctgcttcgaaa 675

                                                                       
Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493
           || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | 
Sbjct: 676 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 735

                              
Query: 494 gccgcaggttgcgcagatt 512
           | |||||| ||||||||||
Sbjct: 736 gtcgcaggatgcgcagatt 754



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
           ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 380 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 439

                      
Query: 249 gctcggccacg 259
           |||||| ||||
Sbjct: 440 gctcggtcacg 450



to top

>dbj|AK060901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D08, full
           insert sequence
          Length = 1364

 Score =  180 bits (91), Expect = 8e-42
 Identities = 172/199 (86%)
 Strand = Plus / Plus

                                                                       
Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
           |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 498 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 557

                                                                       
Query: 374 acctcgaggaggagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaa 433
           ||||||||||||| ||||||| |||||||||| || |||| || || ||||| | |||||
Sbjct: 558 acctcgaggaggaccacccctacgagccccacacctcgccctgtcccatctgcttcgaaa 617

                                                                       
Query: 434 aggtttctaaagatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatc 493
           || || | | ||||||| | ||||||||||||||||||||||| ||||||||||||| | 
Sbjct: 618 agattacaagagatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtg 677

                              
Query: 494 gccgcaggttgcgcagatt 512
           | |||||| ||||||||||
Sbjct: 678 gtcgcaggatgcgcagatt 696



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
           ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 322 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 381

                      
Query: 249 gctcggccacg 259
           |||||| ||||
Sbjct: 382 gctcggtcacg 392



to top

>emb|CT831302.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA237G09, full
           insert sequence
          Length = 2468

 Score =  178 bits (90), Expect = 3e-41
 Identities = 102/106 (96%)
 Strand = Plus / Plus

                                                                       
Query: 190 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 235 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 294

                                                         
Query: 250 ctcggccacgccgatcgggcggggatggacgagctggacatggacg 295
           ||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 295 ctcggccacgccgatcgagcggggatggaggaggtggacatggacg 340



 Score =  123 bits (62), Expect = 2e-24
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                        
Query: 488  agaatcgccgcaggttgcgcagatttgctgttccaggcagccagtcgctctctctgctga 547
            ||||||| ||||||||||||||||| | | |||||||||| ||  | || ||| ||||||
Sbjct: 1714 agaatcgtcgcaggttgcgcagattcgttattccaggcagtcaagccctatctttgctga 1773

                                                                      
Query: 548  gccgggatctacgtgaagcccatttgcaggtgcttctgggaggtggtgggcataggtc 605
            | || ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1774 gtcgagatctacgtgaagcccatttgcaggtgcttctgggaggtgggggacataggtc 1831



 Score =  105 bits (53), Expect = 4e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                       
Query: 328 tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387
           ||||||||||||||||||||||||||||||| ||||||   ||| ||||| |||||||||
Sbjct: 364 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 423

                            
Query: 388 caccccttcgagcccca 404
           |||||||||||||||||
Sbjct: 424 caccccttcgagcccca 440



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                        
Query: 623  caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682
            |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||  
Sbjct: 1852 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 1911

                             
Query: 683  ctgaggaaacatcaaaa 699
            | |||||||||||||||
Sbjct: 1912 cagaggaaacatcaaaa 1928



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                        
Query: 411  gccttgccctatctgttccgaaaaggtttctaaagatatgcttaatcatatcaccatgca 470
            |||||||||||| || || || ||| || | |||||||||||||||||||||||  ||||
Sbjct: 1482 gccttgccctatatgctctgataagattgcaaaagatatgcttaatcatatcactgtgca 1541

                               
Query: 471  acatgggtacttgttcaag 489
            |||||||||||||||||||
Sbjct: 1542 acatgggtacttgttcaag 1560



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                        
Query: 734  taaaagaggcagctgctcggccgtggcggtcaagtattgacttgtccctcacaagggaag 793
            |||||||| || |||||| ||| |||   |||||||||||||  ||||||||||||||||
Sbjct: 1963 taaaagagacacctgctcagccatgggattcaagtattgactcatccctcacaagggaag 2022

                   
Query: 794  aaaggga 800
            |||||||
Sbjct: 2023 aaaggga 2029



to top

>gb|AY105163.1| Zea mays PCO060632 mRNA sequence
          Length = 1505

 Score =  159 bits (80), Expect = 3e-35
 Identities = 146/168 (86%)
 Strand = Plus / Plus

                                                                       
Query: 325 gcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggag 384
           |||||||||||||||||||||||||| |||||||| |||||   |  |||||||||||||
Sbjct: 577 gcctgcccctactgctacgaggaccatgacgtcgcatccctctgcatccacctcgaggag 636

                                                                       
Query: 385 gagcaccccttcgagccccacgccgcgccttgccctatctgttccgaaaaggtttctaaa 444
           || ||||||| |||||||||||||||||| ||||| || || ||| ||| | || | |  
Sbjct: 637 gaccacccctacgagccccacgccgcgccctgccccatttgctcccaaaggattacaagg 696

                                                           
Query: 445 gatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaat 492
           ||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 697 gatatgcttaaccatatcaccatgcaacatggttacttgttcaagaat 744



 Score =  111 bits (56), Expect = 6e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                       
Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
           ||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||
Sbjct: 387 catggactcggagcactggatctcgcgcctggccgccgccaagcgttactacgcggcgca 446

                   
Query: 249 gctcggcc 256
           ||||||||
Sbjct: 447 gctcggcc 454



to top

>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
              complete sequence
          Length = 139139

 Score =  137 bits (69), Expect = 1e-28
 Identities = 72/73 (98%)
 Strand = Plus / Minus

                                                                          
Query: 190    atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 114827 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 114768

                           
Query: 250    ctcggccacgccg 262
              |||||||||||||
Sbjct: 114767 ctcggccacgccg 114755



 Score =  123 bits (62), Expect = 2e-24
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                          
Query: 488    agaatcgccgcaggttgcgcagatttgctgttccaggcagccagtcgctctctctgctga 547
              ||||||| ||||||||||||||||| | | |||||||||| ||  | || ||| ||||||
Sbjct: 113215 agaatcgtcgcaggttgcgcagattcgttattccaggcagtcaagccctatctttgctga 113156

                                                                        
Query: 548    gccgggatctacgtgaagcccatttgcaggtgcttctgggaggtggtgggcataggtc 605
              | || ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 113155 gtcgagatctacgtgaagcccatttgcaggtgcttctgggaggtgggggacataggtc 113098



 Score =  105 bits (53), Expect = 4e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                          
Query: 328    tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387
              ||||||||||||||||||||||||||||||| ||||||   ||| ||||| |||||||||
Sbjct: 114566 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 114507

                               
Query: 388    caccccttcgagcccca 404
              |||||||||||||||||
Sbjct: 114506 caccccttcgagcccca 114490



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                          
Query: 411    gccttgccctatctgttccgaaaaggtttctaaagatatgcttaatcatatcaccatgca 470
              |||||||||||| ||||| || ||| || | |||||||||||||||||||||||  ||||
Sbjct: 113447 gccttgccctatatgttctgataagattgcaaaagatatgcttaatcatatcactgtgca 113388

                                 
Query: 471    acatgggtacttgttcaag 489
              |||||||||||||||||||
Sbjct: 113387 acatgggtacttgttcaag 113369



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                          
Query: 623    caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682
              |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||  
Sbjct: 113077 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 113018

                               
Query: 683    ctgaggaaacatcaaaa 699
              | |||||||||||||||
Sbjct: 113017 cagaggaaacatcaaaa 113001



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 766    agtattgacttgtccctcacaagggaagaaaggga 800
              ||||||||||  |||||||||||||||||||||||
Sbjct: 112457 agtattgactcatccctcacaagggaagaaaggga 112423



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 769    attgacttgtccctcacaagggaagaaaggg 799
              ||||||| |||||||||||| ||||||||||
Sbjct: 102516 attgactcgtccctcacaagtgaagaaaggg 102486



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 262    gatcgggcggggatggacgagctggacatggacg 295
              ||||| ||||||||||| ||| ||||||||||||
Sbjct: 114623 gatcgagcggggatggaggaggtggacatggacg 114590



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  137 bits (69), Expect = 1e-28
 Identities = 72/73 (98%)
 Strand = Plus / Minus

                                                                            
Query: 190      atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgcag 249
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 27750269 atggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgccgcgcag 27750210

                             
Query: 250      ctcggccacgccg 262
                |||||||||||||
Sbjct: 27750209 ctcggccacgccg 27750197



 Score =  123 bits (62), Expect = 2e-24
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                            
Query: 488      agaatcgccgcaggttgcgcagatttgctgttccaggcagccagtcgctctctctgctga 547
                ||||||| ||||||||||||||||| | | |||||||||| ||  | || ||| ||||||
Sbjct: 27748657 agaatcgtcgcaggttgcgcagattcgttattccaggcagtcaagccctatctttgctga 27748598

                                                                          
Query: 548      gccgggatctacgtgaagcccatttgcaggtgcttctgggaggtggtgggcataggtc 605
                | || ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 27748597 gtcgagatctacgtgaagcccatttgcaggtgcttctgggaggtgggggacataggtc 27748540



 Score =  105 bits (53), Expect = 4e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                            
Query: 328      tgcccctactgctacgaggaccacgacgtcgcctccctgatcgcccacctcgaggaggag 387
                ||||||||||||||||||||||||||||||| ||||||   ||| ||||| |||||||||
Sbjct: 27750008 tgcccctactgctacgaggaccacgacgtcgtctccctctgcgcgcacctggaggaggag 27749949

                                 
Query: 388      caccccttcgagcccca 404
                |||||||||||||||||
Sbjct: 27749948 caccccttcgagcccca 27749932



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                            
Query: 411      gccttgccctatctgttccgaaaaggtttctaaagatatgcttaatcatatcaccatgca 470
                |||||||||||| ||||| || ||| || | |||||||||||||||||||||||  ||||
Sbjct: 27748889 gccttgccctatatgttctgataagattgcaaaagatatgcttaatcatatcactgtgca 27748830

                                   
Query: 471      acatgggtacttgttcaag 489
                |||||||||||||||||||
Sbjct: 27748829 acatgggtacttgttcaag 27748811



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                            
Query: 623      caaatatttcagctgatccccttctgtcatcatttggccttagcttcccaacattagatg 682
                |||||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||  
Sbjct: 27748519 caaatatttcagctgaccctcttctgtcatcgtttggccttagctttccaacatcagaca 27748460

                                 
Query: 683      ctgaggaaacatcaaaa 699
                | |||||||||||||||
Sbjct: 27748459 cagaggaaacatcaaaa 27748443



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 766      agtattgacttgtccctcacaagggaagaaaggga 800
                ||||||||||  |||||||||||||||||||||||
Sbjct: 27747899 agtattgactcatccctcacaagggaagaaaggga 27747865



 Score = 46.1 bits (23), Expect = 0.30
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 769      attgacttgtccctcacaagggaagaaaggg 799
                ||||||| |||||||||||| ||||||||||
Sbjct: 27737958 attgactcgtccctcacaagtgaagaaaggg 27737928



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 262      gatcgggcggggatggacgagctggacatggacg 295
                ||||| ||||||||||| ||| ||||||||||||
Sbjct: 27750065 gatcgagcggggatggaggaggtggacatggacg 27750032



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  111 bits (56), Expect = 6e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                            
Query: 314      ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
                |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 27595397 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 27595456

                                                
Query: 374      acctcgaggaggagcaccccttcgagccccac 405
                ||||||||||||| ||||||| ||||||||||
Sbjct: 27595457 acctcgaggaggaccacccctacgagccccac 27595488



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                            
Query: 189      catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
                ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 27595124 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 27595183

                           
Query: 249      gctcggccacg 259
                |||||| ||||
Sbjct: 27595184 gctcggtcacg 27595194



 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 444      agatatgcttaatcatatcaccatgcaacatgggtacttgttcaag 489
                ||||||| | ||||||||||||||||||||||| ||||||||||||
Sbjct: 27596674 agatatgttaaatcatatcaccatgcaacatggttacttgttcaag 27596719



to top

>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0485G01
          Length = 167203

 Score =  111 bits (56), Expect = 6e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                        
Query: 314  ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
            |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 3963 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 4022

                                            
Query: 374  acctcgaggaggagcaccccttcgagccccac 405
            ||||||||||||| ||||||| ||||||||||
Sbjct: 4023 acctcgaggaggaccacccctacgagccccac 4054



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                        
Query: 189  catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
            ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 3690 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 3749

                       
Query: 249  gctcggccacg 259
            |||||| ||||
Sbjct: 3750 gctcggtcacg 3760



 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                          
Query: 444  agatatgcttaatcatatcaccatgcaacatgggtacttgttcaag 489
            ||||||| | ||||||||||||||||||||||| ||||||||||||
Sbjct: 5240 agatatgttaaatcatatcaccatgcaacatggttacttgttcaag 5285



to top

>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0007F06
          Length = 150817

 Score =  111 bits (56), Expect = 6e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                         
Query: 314   ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
             |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 62691 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 62750

                                             
Query: 374   acctcgaggaggagcaccccttcgagccccac 405
             ||||||||||||| ||||||| ||||||||||
Sbjct: 62751 acctcgaggaggaccacccctacgagccccac 62782



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                         
Query: 189   catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
             ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 62418 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 62477

                        
Query: 249   gctcggccacg 259
             |||||| ||||
Sbjct: 62478 gctcggtcacg 62488



 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 444   agatatgcttaatcatatcaccatgcaacatgggtacttgttcaag 489
             ||||||| | ||||||||||||||||||||||| ||||||||||||
Sbjct: 63968 agatatgttaaatcatatcaccatgcaacatggttacttgttcaag 64013



to top

>dbj|AK064817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E14, full
           insert sequence
          Length = 2618

 Score =  111 bits (56), Expect = 6e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 314 ggcccgacttggcctgcccctactgctacgaggaccacgacgtcgcctccctgatcgccc 373
           |||| ||| |||||||||||||||||||||||||||||||| |||| |||||   |||||
Sbjct: 538 ggccggacgtggcctgcccctactgctacgaggaccacgacatcgcgtccctctgcgccc 597

                                           
Query: 374 acctcgaggaggagcaccccttcgagccccac 405
           ||||||||||||| ||||||| ||||||||||
Sbjct: 598 acctcgaggaggaccacccctacgagccccac 629



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 189 catggactcggagcactggatctcgcgcctggccgccgccaagcggttctacgcagcgca 248
           ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 362 catggactcggagcactggatctcgagcctcgccgccgccaagcggttctacgcggcgca 421

                      
Query: 249 gctcggccacg 259
           |||||| ||||
Sbjct: 422 gctcggtcacg 432



 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                        
Query: 444  agatatgcttaatcatatcaccatgcaacatgggtacttgttcaagaatcgccgcaggtt 503
            ||||||| | ||||||||||||||||||||||| ||||||||||||| | | |||||| |
Sbjct: 1815 agatatgttaaatcatatcaccatgcaacatggttacttgttcaagagtggtcgcaggat 1874

                     
Query: 504  gcgcagatt 512
            |||||||||
Sbjct: 1875 gcgcagatt 1883



to top

>gb|DQ245555.1| Zea mays clone 17429 mRNA sequence
          Length = 728

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 518 ttccaggcagccagtcgctctctctgctgagccgggatctacgtgaagcccatttgcagg 577
           |||||||||||||| | |||||| ||||||| || |||||||| |||||||| |||||||
Sbjct: 99  ttccaggcagccaggccctctctttgctgagtcgagatctacgggaagcccacttgcagg 158

                        
Query: 578 tgcttctgggagg 590
           |||| || |||||
Sbjct: 159 tgctcctcggagg 171



 Score = 48.1 bits (24), Expect = 0.075
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 800 agcaagccagcgtgagagcggcattcgtgcaagacctgctgctctccaccctattc 855
           |||||||| |||| |||||  | |||||||| |||||||||||||| || ||||||
Sbjct: 402 agcaagcccgcgtcagagccacgttcgtgcaggacctgctgctctctactctattc 457



to top

>emb|CR753894.12| Mouse DNA sequence from clone RP23-222I6 on chromosome 2, complete
              sequence
          Length = 110921

 Score = 50.1 bits (25), Expect = 0.019
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||||||||||||||||||||||||
Sbjct: 101443 tctacctacccatctatctatctac 101467



to top

>gb|AC118721.9| Mus musculus chromosome 8, clone RP24-157I20, complete sequence
          Length = 161212

 Score = 48.1 bits (24), Expect = 0.075
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 159   tctacctacccatctatctatcta 182
             ||||||||||||||||||||||||
Sbjct: 31138 tctacctacccatctatctatcta 31115



to top

>dbj|AK066149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057B07, full
            insert sequence
          Length = 3858

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 769  attgacttgtccctcacaagggaagaaaggg 799
            ||||||| |||||||||||| ||||||||||
Sbjct: 3440 attgactcgtccctcacaagtgaagaaaggg 3470



to top

>gb|AC011311.11| Homo sapiens 3 BAC RP11-525K18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 187628

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 431    aaaaggtttctaaagatatgctt 453
              |||||||||||||||||||||||
Sbjct: 147411 aaaaggtttctaaagatatgctt 147433



to top

>emb|CR848024.4| Zebrafish DNA sequence from clone CH211-184C11 in linkage group 7,
              complete sequence
          Length = 151237

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 160    ctacctacccatctatctatcta 182
              |||||||||||||||||||||||
Sbjct: 133478 ctacctacccatctatctatcta 133500



to top

>gb|AY591673.1| Mus musculus clone IgK4-75 immunoglobulin kappa-like gene, partial
            sequence
          Length = 4540

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 153  ctatattctacctacccatctatctatcta 182
            |||||||||| ||||| |||||||||||||
Sbjct: 3180 ctatattctatctacctatctatctatcta 3209



to top

>gb|AC121909.3| Mus musculus BAC clone RP24-179L9 from chromosome 5, complete
            sequence
          Length = 155771

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 159  tctacctacccatctatctatc 180
            ||||||||||||||||||||||
Sbjct: 2184 tctacctacccatctatctatc 2205



to top

>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
             hansenii
          Length = 1592360

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 431   aaaaggtttctaaagatatgcttaat 456
             |||||||||||| |||||||||||||
Sbjct: 11514 aaaaggtttctagagatatgcttaat 11539



to top

>gb|AC158649.6| Mus musculus 6 BAC RP23-279O6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199438

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 153   ctatattctacctacccatctatctatcta 182
             |||||||||| ||||| |||||||||||||
Sbjct: 76768 ctatattctatctacctatctatctatcta 76739



to top

>gb|AC021636.16| Homo sapiens chromosome 8, clone RP11-637F16, complete sequence
          Length = 148687

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 159   tctacctacccatctatctatc 180
             ||||||||||||||||||||||
Sbjct: 17204 tctacctacccatctatctatc 17183



to top

>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence
          Length = 183319

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 525   cagccagtcgctctctctgctgagcc 550
             ||||||||| ||||||||||||||||
Sbjct: 86663 cagccagtccctctctctgctgagcc 86638



to top

>gb|AC187030.5| Canis Familiaris chromosome 20, clone XX-21B12, complete sequence
          Length = 156814

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1151  ctttgcttacaagcattgttt 1171
             |||||||||||||||||||||
Sbjct: 22635 ctttgcttacaagcattgttt 22615



to top

>gb|DQ887677.1| Piper cenocladum chloroplast, complete genome
          Length = 160624

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 105  gatccgcgcgcggggtcggga 125
            |||||||||||||||||||||
Sbjct: 8058 gatccgcgcgcggggtcggga 8078



to top

>ref|NM_001060355.1| Oryza sativa (japonica cultivar-group) Os04g0609200 (Os04g0609200)
            mRNA, partial cds
          Length = 1950

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1157 ttacaagcattgtttttgttg 1177
            |||||||||||||||||||||
Sbjct: 567  ttacaagcattgtttttgttg 587



to top

>gb|DQ001084.1| Equus caballus isolate CTNNA2 genomic sequence
          Length = 740

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 804 agccagcgtgagagcggcatt 824
           |||||||||||||||||||||
Sbjct: 636 agccagcgtgagagcggcatt 616



to top

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 244    gcgcagctcggccacgccgat 264
              |||||||||||||||||||||
Sbjct: 571319 gcgcagctcggccacgccgat 571299



to top

>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1157  ttacaagcattgtttttgttg 1177
             |||||||||||||||||||||
Sbjct: 65438 ttacaagcattgtttttgttg 65418



to top

>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete sequence
          Length = 243701

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 158    ttctacctacccatctatctatcta 182
              ||||||||| |||||||||||||||
Sbjct: 208271 ttctacctatccatctatctatcta 208295



to top

>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence
          Length = 239046

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1009  tgatgtgggcatgaggtgtcc 1029
             |||||||||||||||||||||
Sbjct: 87900 tgatgtgggcatgaggtgtcc 87920



to top

>gb|AC115006.12| Mus musculus chromosome 8, clone RP24-184D21, complete sequence
          Length = 163874

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 158    ttctacctacccatctatctatcta 182
              ||||||||| |||||||||||||||
Sbjct: 137442 ttctacctatccatctatctatcta 137466



to top

>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence
          Length = 191726

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 154   tatattctacctacccatctatctatcta 182
             |||| |||||||||| |||||||||||||
Sbjct: 55149 tataatctacctacctatctatctatcta 55177



to top

>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence
          Length = 178437

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 154    tatattctacctacccatctatctatcta 182
              |||| |||||||||| |||||||||||||
Sbjct: 160488 tataatctacctacctatctatctatcta 160516



to top

>gb|AC114901.8| Mus musculus chromosome 3, clone RP23-33I24, complete sequence
          Length = 168654

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 97847 tctacctacctatctatctatctac 97823



to top

>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence
          Length = 197242

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 52082 tctacctacctatctatctatctac 52058



to top

>gb|AC121141.12| Mus musculus chromosome 17, clone RP23-430A11, complete sequence
          Length = 182218

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||| ||||||||||||||||||||
Sbjct: 78736 tctatctacccatctatctatctac 78760



to top

>gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, complete sequence
          Length = 228107

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||||||||| ||||||||||||||
Sbjct: 155570 tctacctaccaatctatctatctac 155546



to top

>gb|AC120176.7| Mus musculus chromosome 18, clone RP24-494J20, complete sequence
          Length = 162180

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 162   acctacccatctatctatcta 182
             |||||||||||||||||||||
Sbjct: 28460 acctacccatctatctatcta 28440



to top

>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 227955

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 110   gcgcgcggggtcgggagaggagcggcgcg 138
             |||||||||| |||| |||||||||||||
Sbjct: 61849 gcgcgcgggggcgggggaggagcggcgcg 61821



to top

>gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 196424

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 95103 tctacctacctatctatctatctac 95127



to top

>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence
          Length = 236084

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||||| ||||||||||||||||||
Sbjct: 100133 tctacccacccatctatctatctac 100109



to top

>gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosome 14, complete
             sequence
          Length = 124918

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 674   cattagatgctgaggaaacat 694
             |||||||||||||||||||||
Sbjct: 54661 cattagatgctgaggaaacat 54681



to top

>gb|AC157944.2| Mus musculus BAC clone RP23-456N8 from chromosome 15, complete sequence
          Length = 179092

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 158    ttctacctacccatctatctatcta 182
              ||||||||||| |||||||||||||
Sbjct: 177321 ttctacctacctatctatctatcta 177297



to top

>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence
          Length = 193216

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 154    tatattctacctacccatctatctatcta 182
              |||| |||||||||| |||||||||||||
Sbjct: 188336 tataatctacctacctatctatctatcta 188308



to top

>gb|AC113476.20| Mus musculus chromosome 17, clone RP23-304J1, complete sequence
          Length = 227026

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 158    ttctacctacccatctatctatcta 182
              ||||||||| |||||||||||||||
Sbjct: 198455 ttctacctatccatctatctatcta 198431



to top

>gb|AC105297.35| Mus musculus strain C57BL/6J clone rp23-14k19 map 17, complete sequence
          Length = 236275

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||||||||| ||||||||||||||
Sbjct: 151467 tctacctacctatctatctatctac 151491



to top

>gb|AC124368.5| Mus musculus BAC clone RP24-546J13 from chromosome 14, complete
             sequence
          Length = 160510

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 158   ttctacctacccatctatctatcta 182
             ||||||||||| |||||||||||||
Sbjct: 97493 ttctacctacctatctatctatcta 97469



to top

>gb|AC124691.4| Mus musculus BAC clone RP24-158O8 from chromosome 15, complete sequence
          Length = 176829

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 158   ttctacctacccatctatctatcta 182
             ||||||||||| |||||||||||||
Sbjct: 53797 ttctacctacctatctatctatcta 53773



to top

>gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome 13, complete sequence
          Length = 168858

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||| ||||||||||||||||||||
Sbjct: 34709 tctatctacccatctatctatctac 34685



to top

>gb|AC125138.4| Mus musculus BAC clone RP24-324N8 from chromosome 5, complete sequence
          Length = 171978

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 78443 tctacctacctatctatctatctac 78467



to top

>gb|AC124714.4| Mus musculus BAC clone RP24-128K11 from chromosome 1, complete sequence
          Length = 143929

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 784    acaagggaagaaagggagcaa 804
              |||||||||||||||||||||
Sbjct: 118597 acaagggaagaaagggagcaa 118617



to top

>gb|AC122324.4| Mus musculus BAC clone RP23-333I5 from chromosome 3, complete sequence
          Length = 243378

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 162   acctacccatctatctatcta 182
             |||||||||||||||||||||
Sbjct: 79099 acctacccatctatctatcta 79079



to top

>gb|AC122824.3| Mus musculus BAC clone RP23-206D5 from 13, complete sequence
          Length = 195655

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||| ||||||||||||||||||||
Sbjct: 183130 tctatctacccatctatctatctac 183106



to top

>gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, complete sequence
          Length = 217309

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 162   acctacccatctatctatcta 182
             |||||||||||||||||||||
Sbjct: 10282 acctacccatctatctatcta 10302



to top

>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence
          Length = 206099

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 82956 tctacctacctatctatctatctac 82980



to top

>gb|AC159970.4| Mus musculus chromosome 3, clone RP23-301J11, complete sequence
          Length = 191207

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||||||||| ||||||||||||||
Sbjct: 146735 tctacctacctatctatctatctac 146759



to top

>gb|AC112163.7| Mus Musculus chromosome 13 BAC, clone MGS1-437011 ES cell line,
             Complete Sequence, complete sequence
          Length = 159042

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 47158 tctacctacctatctatctatctac 47182



to top

>gb|AC159281.3| Mus musculus BAC clone RP23-321H9 from chromosome 3, complete sequence
          Length = 229114

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 22378 tctacctacctatctatctatctac 22354



to top

>dbj|AK162958.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330086C01 product:ecotropic viral
            integration site 2a, full insert sequence
          Length = 2670

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 159  tctacctacccatctatctatctac 183
            |||||||||| ||||||||||||||
Sbjct: 2087 tctacctacctatctatctatctac 2111



to top

>ref|NM_077409.2| Caenorhabditis elegans C05A9.1 (p-glycoprotein) mRNA, complete cds
          Length = 3907

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 720  tgatgtaccagtgctaaaaga 740
            |||||||||||||||||||||
Sbjct: 1254 tgatgtaccagtgctaaaaga 1274



to top

>gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete sequence
          Length = 112570

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 110   gcgcgcggggtcgggagaggagcggcgcg 138
             |||||||||| |||| |||||||||||||
Sbjct: 53398 gcgcgcgggggcgggggaggagcggcgcg 53426



to top

>emb|Z70265.1|CEC05A9 Caenorhabditis elegans Cosmid C05A9, complete sequence
          Length = 34309

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 720   tgatgtaccagtgctaaaaga 740
             |||||||||||||||||||||
Sbjct: 31437 tgatgtaccagtgctaaaaga 31417



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1157     ttacaagcattgtttttgttg 1177
                |||||||||||||||||||||
Sbjct: 30888863 ttacaagcattgtttttgttg 30888843



to top

>gb|AC026585.9| Homo sapiens, clone RP11-17E3, complete sequence
          Length = 172798

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||| ||||||||||||||||
Sbjct: 77887 tctacctatccatctatctatctac 77863



to top

>gb|AC022124.6| Homo sapiens chromosome 5 clone CTD-2075G19, complete sequence
          Length = 120733

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 154   tatattctacctacccatctatctatcta 182
             ||||||||| ||||| |||||||||||||
Sbjct: 33100 tatattctatctacctatctatctatcta 33072



to top

>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 4/11
          Length = 346406

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 507    cagatttgctgttccaggcag 527
              |||||||||||||||||||||
Sbjct: 154873 cagatttgctgttccaggcag 154853



to top

>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1157   ttacaagcattgtttttgttg 1177
              |||||||||||||||||||||
Sbjct: 156384 ttacaagcattgtttttgttg 156364



to top

>emb|AL591174.13| Mouse DNA sequence from clone RP23-271B20 on chromosome 11, complete
              sequence
          Length = 205379

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||||||||| ||||||||||||||
Sbjct: 175806 tctacctacctatctatctatctac 175830



to top

>gb|AC069294.5|AC069294 Homo sapiens BAC clone RP11-757A13 from 7, complete sequence
          Length = 123778

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||| ||||||||||||||||||||
Sbjct: 62941 tctatctacccatctatctatctac 62917



to top

>emb|AL645965.8| Mouse DNA sequence from clone RP23-65I14 on chromosome 11 Contains the
             5' end of the gene for a novel protein (330000P08Rik)
             (Luc7a), the gene for a novel protein (5530600A18Rik), the
             Abcc3 gene for ATP-binding cassette sub-family C
             (CFTR/MRP) member 3, the Cacna1g gene for calcium channel
             voltage-dependent T type alpha 1G subunit, the 3' end of
             the Tisp78 gene for transcript increased in spermiogenesis
             78 and one CpG island, complete sequence
          Length = 161978

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1010  gatgtgggcatgaggtgtcct 1030
             |||||||||||||||||||||
Sbjct: 19367 gatgtgggcatgaggtgtcct 19387



to top

>emb|AL592522.12| Mouse DNA sequence from clone RP23-210M6 on chromosome 11 Contains the
             genes for two novel 7 transmembrane receptor (rhodopsin
             family) domain-containing proteins, a high mobility group
             box 1 (Hmgb1) pseudogene, the Cias1 gene for cold
             autoinflammatory syndrome 1 homolog (human), a novel gene
             (4933439C10Rik), the gene for a novel protein
             (D130067D09), a ribosomal protein L18 (Rpl18) pseudogene,
             an ariadne homolog 2 (Drosophila) (Arih2) pseudogene, the
             gene for a novel zinc finger domain-containing protein,
             the 3' end of the gene for a novel protein and one CpG
             island, complete sequence
          Length = 157300

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||| ||||||||||||||||||||
Sbjct: 74322 tctatctacccatctatctatctac 74298



to top

>gb|AC007502.6| Homo sapiens chromosome 16 clone RP11-98C8, complete sequence
          Length = 158696

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 52629 tctacctacctatctatctatctac 52605



to top

>gb|AF280107.1|AF280107 Homo sapiens cytochrome P450 polypeptide 43 (CYP3A43) gene, partial
             cds; cytochrome P450 polypeptide 4 (CYP3A4) and cytochrome
             P450 polypeptide 7 (CYP3A7) genes, complete cds; and
             cytochrome P450 polypeptide 5 (CYP3A5) gene, partial cds
          Length = 174832

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||| ||||||||||||||||||||
Sbjct: 89663 tctatctacccatctatctatctac 89639



to top

>gb|DQ005611.1| Homo sapiens cytochrome P450, family 3, subfamily A, polypeptide 4
             (CYP3A4) gene, complete cds
          Length = 30035

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||| ||||||||||||||||||||
Sbjct: 29665 tctatctacccatctatctatctac 29641



to top

>gb|AC154651.2| Mus musculus BAC clone RP24-261K2 from chromosome 9, complete sequence
          Length = 173354

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 674   cattagatgctgaggaaacat 694
             |||||||||||||||||||||
Sbjct: 23319 cattagatgctgaggaaacat 23299



to top

>dbj|AK103652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135D24, full
            insert sequence
          Length = 1952

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1157 ttacaagcattgtttttgttg 1177
            |||||||||||||||||||||
Sbjct: 568  ttacaagcattgtttttgttg 588



to top

>gb|AC011449.6|AC011449 Homo sapiens chromosome 19 clone CTC-263F14, complete sequence
          Length = 120099

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 162   acctacccatctatctatcta 182
             |||||||||||||||||||||
Sbjct: 30569 acctacccatctatctatcta 30589



to top

>gb|AC133467.7| Mus musculus chromosome 5, clone RP24-499N22, complete sequence
          Length = 173765

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 159  tctacctacccatctatctatctac 183
            |||||||||| ||||||||||||||
Sbjct: 4536 tctacctacctatctatctatctac 4560



to top

>emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in linkage group 19, complete
              sequence
          Length = 200523

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    ctacctacccatctatctatc 180
              |||||||||||||||||||||
Sbjct: 103932 ctacctacccatctatctatc 103952



to top

>gb|AF009605.1|AF009605 Mus musculus phosphoenolpyruvate carboxykinase (PEPCK) gene, complete
            cds
          Length = 12141

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 159  tctacctacccatctatctatctac 183
            |||| ||||||||||||||||||||
Sbjct: 2791 tctatctacccatctatctatctac 2767



to top

>gb|AC122462.5| Mus musculus BAC clone RP24-294G11 from 3, complete sequence
          Length = 160501

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 67259 tctacctacctatctatctatctac 67283



to top

>gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complete sequence
          Length = 177145

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 158    ttctacctacccatctatctatcta 182
              ||||||||| |||||||||||||||
Sbjct: 119518 ttctacctatccatctatctatcta 119494



to top

>emb|CT010497.9| Mouse DNA sequence from clone RP23-239L12 on chromosome 12, complete
              sequence
          Length = 189472

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||||||||| ||||||||||||||
Sbjct: 158012 tctacctacctatctatctatctac 158036



to top

>gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, complete sequence
          Length = 174162

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 158    ttctacctacccatctatctatcta 182
              ||||||||||| |||||||||||||
Sbjct: 156572 ttctacctacctatctatctatcta 156596



to top

>emb|AL627083.18| Mouse DNA sequence from clone RP23-378E2 on chromosome 4, complete
              sequence
          Length = 219379

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 159    tctacctacccatctatctat 179
              |||||||||||||||||||||
Sbjct: 161164 tctacctacccatctatctat 161184



to top

>emb|AL844867.3| Mouse DNA sequence from clone RP23-17B8 on chromosome X, complete
             sequence
          Length = 175256

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 158   ttctacctacccatctatctatcta 182
             ||||||||||| |||||||||||||
Sbjct: 80891 ttctacctacctatctatctatcta 80867



to top

>emb|AL772371.3| Mouse DNA sequence from clone RP23-234N12 on chromosome 4, complete
             sequence
          Length = 237282

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 159   tctacctacccatctatctatctac 183
             |||||||||| ||||||||||||||
Sbjct: 84374 tctacctacctatctatctatctac 84398



to top

>gb|DQ138648.1| Drosophila yakuba strain T33 CG7960 gene, partial cds
          Length = 492

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 532 tcgctctctctgctgagccgg 552
           |||||||||||||||||||||
Sbjct: 56  tcgctctctctgctgagccgg 36



to top

>gb|DQ138647.1| Drosophila yakuba strain Tai18 CG7960 gene, partial cds
          Length = 492

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 532 tcgctctctctgctgagccgg 552
           |||||||||||||||||||||
Sbjct: 56  tcgctctctctgctgagccgg 36



to top

>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence
          Length = 206555

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 159    tctacctacccatctatctatctac 183
              |||| ||||||||||||||||||||
Sbjct: 202486 tctatctacccatctatctatctac 202510



to top

>gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome 12, complete sequence
          Length = 185710

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1009   tgatgtgggcatgaggtgtcc 1029
              |||||||||||||||||||||
Sbjct: 177265 tgatgtgggcatgaggtgtcc 177285


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 186,508,832
Number of extensions: 11003269
Number of successful extensions: 239920
Number of sequences better than 10.0: 99
Number of HSP's gapped: 239917
Number of HSP's successfully gapped: 144
Length of query: 1224
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1201
Effective length of database: 18,503,978,556
Effective search space: 22223278245756
Effective search space used: 22223278245756
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top