ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf64f24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AJ495800:Os01g0229000 | 31 | 0.94 | 2 | AK120527:Os03g0265400 | 31 | 0.94 | 3 | AK104424:Os03g0265400 | 31 | 0.94 | 4 | AK104116:Os03g0265400 | 31 | 0.94 | 5 | AK061468:Os03g0265400 | 31 | 0.94 | 6 | AK121230:Os05g0107300 | 31 | 0.94 | 7 | AK107125:Os12g0168100 | 30 | 1.2 | 8 | Os02g0260500:Os02g0260500 | 30 | 1.2 | 9 | Os07g0634000:Os07g0634000 | 30 | 2.1 | 10 | Os01g0933200:Os01g0933200 | 29 | 3.6 | 11 | AK120477:Os09g0566100 | 29 | 3.6 | 12 | AK071766:Os02g0678400 | 29 | 3.6 | 13 | AK065725:Os09g0566100 | 29 | 3.6 | 14 | Os08g0229300:Os08g0229300 | 28 | 4.6 | 15 | AK103466:Os03g0156500 | 28 | 4.6 | 16 | Os08g0135200:Os08g0135200 | 28 | 4.7 | 17 | AF011331: | 28 | 4.7 | 18 | Os12g0138100:Os12g0138100 | 28 | 7.9 | 19 | Os05g0180500:Os05g0180500 | 28 | 7.9 | 20 | Os02g0209000:Os02g0209000 | 28 | 7.9 | 21 | AK112037:Os03g0186500 | 28 | 7.9 | 22 | AK111688:Os03g0186500 | 28 | 7.9 |
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>AJ495800:Os01g0229000 | Length = 131 Score = 30.8 bits (68), Expect = 0.94 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -3 Query: 571 TDTTTSGNPRSKREPMPSAF-TNMHSDWEAS*FVCPSPRTNSTPNSGSSM 425 +D +GNP +K+EP + T + ++ F C +P +S N+GS++ Sbjct: 64 SDKENTGNPDAKKEPGTTKLQTKIMAEGRVLDFECTTPERSSDKNAGSNL 113
>AK120527:Os03g0265400 | Length = 323 Score = 30.8 bits (68), Expect = 0.94 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +2 Query: 263 SSSPRLSPTPCRFVPLRPVPAISSPRTA 346 SSSP LSPT F+P A SSPR A Sbjct: 17 SSSPFLSPTSVSFLPSAAAAASSSPRVA 44
>AK104424:Os03g0265400 | Length = 323 Score = 30.8 bits (68), Expect = 0.94 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +2 Query: 263 SSSPRLSPTPCRFVPLRPVPAISSPRTA 346 SSSP LSPT F+P A SSPR A Sbjct: 17 SSSPFLSPTSVSFLPSAAAAASSSPRVA 44
>AK104116:Os03g0265400 | Length = 323 Score = 30.8 bits (68), Expect = 0.94 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +2 Query: 263 SSSPRLSPTPCRFVPLRPVPAISSPRTA 346 SSSP LSPT F+P A SSPR A Sbjct: 17 SSSPFLSPTSVSFLPSAAAAASSSPRVA 44
>AK061468:Os03g0265400 | Length = 323 Score = 30.8 bits (68), Expect = 0.94 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +2 Query: 263 SSSPRLSPTPCRFVPLRPVPAISSPRTA 346 SSSP LSPT F+P A SSPR A Sbjct: 17 SSSPFLSPTSVSFLPSAAAAASSSPRVA 44
>AK121230:Os05g0107300 | Length = 1210 Score = 30.8 bits (68), Expect = 0.94 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Frame = -1 Query: 399 GRQWRSCTRKQLQSR-----GSGAVRGLEMAGTGRSGTNR 295 G +W C R++ SR GSG G +G+GRSG + Sbjct: 1049 GTKWNKCDREREHSRDASAKGSGTKSGRHSSGSGRSGERK 1088
>AK107125:Os12g0168100 | Length = 341 Score = 30.4 bits (67), Expect = 1.2 Identities = 27/90 (30%), Positives = 33/90 (36%), Gaps = 14/90 (15%) Frame = -2 Query: 236 PATNRTAKRKETTMARDGRWPRDRHQAWHRRFGHVCGRPER-RRVEREWKL--------- 87 P ++ + T A RW R R + W RR GR R RR R W++ Sbjct: 14 PESSGGGRSTPTPAATRARWRRRRRRCWRRRCCRGGGRRRRWRRWCRRWRVSWPAAAARR 73 Query: 86 ----GFMRGSPGRFVGYQWG*WPPPTRRCG 9 G R SP R PP R CG Sbjct: 74 CRRRGQPRESPRR---------APPWRGCG 94
>Os02g0260500:Os02g0260500 | Length = 715 Score = 30.4 bits (67), Expect = 1.2 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 7/86 (8%) Frame = -1 Query: 348 GAVRGLEMAGTGRSGT--NRQGVGDSRGEEDQ*L-----RPWRRPSNEPNXXXXXXXXXX 190 G V G E A T + R+G GD RGEE+ L R RR + Sbjct: 27 GKVAGQEGASTSAAAAVAARRGEGDCRGEEEVPLRVRLGRAARRRAGPCTPSPSWKLEGE 86 Query: 189 GWPLATGSTSSVAPAVRPCMRETRAA 112 +A G + V PAV P R + +A Sbjct: 87 EVEVAAGELAPVHPAVAPARRSSASA 112
>Os07g0634000:Os07g0634000 | Length = 368 Score = 29.6 bits (65), Expect = 2.1 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +3 Query: 123 SPAYMAEPPVPRLMSIPWPAAIPRHRRLFPLRRSVRCWDAAKVSITGLL 269 +P +A PP P+ P PAA P +R + RS W ++ + GLL Sbjct: 62 APVAVAVPPQPQPQQPPAPAAAPPYRWSRAVARSPAAW--MRLGVGGLL 108
>Os01g0933200:Os01g0933200 | Length = 336 Score = 28.9 bits (63), Expect = 3.6 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +3 Query: 123 SPAYMAEPPVPRLMSIPWPAAIP 191 S AY A PP P MS+P P A P Sbjct: 234 SAAYYAAPPAPAPMSMPMPMARP 256
>AK120477:Os09g0566100 | Length = 965 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -3 Query: 571 TDTTTSGNPRSKREPMPSAFTNMHSDWEAS*FVCPSPRTNSTPNSGSSMSCCFAAKG 401 +DT S P S R P+P +S FVCP+ +T+ SS+ AKG Sbjct: 661 SDTLKSQAPNSLRPPLPPGLPL------SSPFVCPTTQTSEKAAPLSSLLSSLVAKG 711
>AK071766:Os02g0678400 | Length = 203 Score = 28.9 bits (63), Expect = 3.6 Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 8/72 (11%) Frame = +2 Query: 257 HWSSSPRLSPTPCRFVPLRPVPAISSPR--------TAPLPRD*SCFRVQLRH*RPTFCR 412 H+ SP P P R P R P S+PR TAP P S R + R R T Sbjct: 8 HFPLSPPGLPPPIRISPRRAAPPFSAPRRRAWASPPTAPPPPPRSRRRPRSR--RRTSSS 65 Query: 413 KATRHGGTGVWS 448 GG+G S Sbjct: 66 STAGPGGSGACS 77
>AK065725:Os09g0566100 | Length = 1069 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -3 Query: 571 TDTTTSGNPRSKREPMPSAFTNMHSDWEAS*FVCPSPRTNSTPNSGSSMSCCFAAKG 401 +DT S P S R P+P +S FVCP+ +T+ SS+ AKG Sbjct: 765 SDTLKSQAPNSLRPPLPPGLPL------SSPFVCPTTQTSEKAAPLSSLLSSLVAKG 815
>Os08g0229300:Os08g0229300 | Length = 254 Score = 28.5 bits (62), Expect = 4.6 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +3 Query: 144 PPVPRLMSIPWPAAIPRHRRLFPLRRSV 227 PP+P L P A PRHRRL PL R V Sbjct: 42 PPLPPL---PLAAPSPRHRRLPPLPRRV 66
>AK103466:Os03g0156500 | Length = 481 Score = 28.5 bits (62), Expect = 4.6 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 260 WSSSPRL-SPTPCRFVPLRPVPAISSPRTAPLP 355 W + P L SP P P P+P +SP+ APLP Sbjct: 62 WPALPGLASPPPTTLTPT-PMPPKASPKVAPLP 93
>Os08g0135200:Os08g0135200 | Length = 123 Score = 28.5 bits (62), Expect = 4.7 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 3/84 (3%) Frame = -1 Query: 552 EILVVNGSPCHQPSPTCILTGKRPSSCVR---LRGRILLQTPVPPCLVALRQKVGRQWRS 382 E+ V +G+ +P P PS C+R L GR + PP L R +VG + R Sbjct: 29 EVEVRHGAVPPRPLP--------PSRCLRRGPLHGR---RVAAPPLLAVARGRVGGRNRR 77 Query: 381 CTRKQLQSRGSGAVRGLEMAGTGR 310 R++ R S A E G G+ Sbjct: 78 EGRRECVRRDSRAPIAKEKVGEGK 101
>AF011331: | Length = 161 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 381 CTRKQLQSRGSGAVRGLEMAGTGRSGTNRQGVGDSRG 271 C R++ RG G RG G R G +G G+S G Sbjct: 121 CQRRESGYRGGGGYRGGRGGGNYRGGYGSRGGGNSXG 157
>Os12g0138100:Os12g0138100 | Length = 977 Score = 27.7 bits (60), Expect = 7.9 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = +2 Query: 461 RRRTHELGR-FPVRMHVGEG*WHGLPFTTRISASSCIGVIGLIGPTYARLDHGGHLLYQT 637 R HE R + RM GL ++ + A + G +GP R D GGH + Sbjct: 894 RTERHERARQWAARMEAAGMESVGLSYSGAMEARKLLQSCGWVGPYEVRHDAGGHGFF-- 951 Query: 638 LCW 646 CW Sbjct: 952 FCW 954
>Os05g0180500:Os05g0180500 | Length = 357 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 210 PLRRSVRCWDAAKVSITGLLRHGCHQLP 293 PL RS R WDA + + GL+ G + P Sbjct: 69 PLLRSPRSWDARRAGLGGLIDDGLAEPP 96
>Os02g0209000:Os02g0209000 | Length = 807 Score = 27.7 bits (60), Expect = 7.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -2 Query: 107 VEREWKLGFMRGSPGRFVGYQWG 39 +ER W LG+M+GS +GY G Sbjct: 279 LERVWALGYMKGSRRVVIGYDEG 301
>AK112037:Os03g0186500 | Length = 544 Score = 27.7 bits (60), Expect = 7.9 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -3 Query: 565 TTTSGNPRSKREPMPSAFTNMHSDWEAS*FVCPSPRTNSTPNSGSSM 425 + TSGNP P P+A TN W + PSP + GS++ Sbjct: 395 SVTSGNPSPSPSPSPTAPTNA---WRSPLLSSPSPIAPRSRAPGSNL 438
>AK111688:Os03g0186500 | Length = 1308 Score = 27.7 bits (60), Expect = 7.9 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -3 Query: 565 TTTSGNPRSKREPMPSAFTNMHSDWEAS*FVCPSPRTNSTPNSGSSM 425 + TSGNP P P+A TN W + PSP + GS++ Sbjct: 1159 SVTSGNPSPSPSPSPTAPTNA---WRSPLLSSPSPIAPRSRAPGSNL 1202 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,323,789 Number of extensions: 627668 Number of successful extensions: 2203 Number of sequences better than 10.0: 22 Number of HSP's gapped: 2198 Number of HSP's successfully gapped: 22 Length of query: 235 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 138 Effective length of database: 11,515,878 Effective search space: 1589191164 Effective search space used: 1589191164 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
