No.
Definition
Score (bits)
E Value
1 emb|CT831581.1| Oryza sativa (indica cultivar-group) cDNA clone:...
163
2e-36
2 ref|NM_001074280.1| Oryza sativa (japonica cultivar-group) Os11g...
163
2e-36
3 dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon...
163
2e-36
4 dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon...
163
2e-36
5 dbj|AK240736.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
155
5e-34
6 gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome...
155
5e-34
7 gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full...
155
5e-34
8 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
155
5e-34
9 gb|AY107519.1| Zea mays PCO078033 mRNA sequence
147
1e-31
10 ref|NM_001074281.1| Oryza sativa (japonica cultivar-group) Os11g...
145
5e-31
11 gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1...
145
5e-31
12 emb|CT834734.1| Oryza sativa (indica cultivar-group) cDNA clone:...
137
1e-28
13 emb|CT831313.1| Oryza sativa (indica cultivar-group) cDNA clone:...
137
1e-28
14 gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome...
131
7e-27
15 gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome...
131
7e-27
16 ref|NM_001074279.1| Oryza sativa (japonica cultivar-group) Os11g...
129
3e-26
17 ref|NM_001074098.1| Oryza sativa (japonica cultivar-group) Os11g...
129
3e-26
18 dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon...
129
3e-26
19 ref|NM_001074271.1| Oryza sativa (japonica cultivar-group) Os11g...
119
3e-23
20 gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome...
119
3e-23
21 ref|NM_001074274.1| Oryza sativa (japonica cultivar-group) Os11g...
101
6e-18
22 dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon...
101
6e-18
23 gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete...
92
6e-15
24 ref|NM_001074277.1| Oryza sativa (japonica cultivar-group) Os11g...
90
2e-14
25 emb|CT836570.1| Oryza sativa (indica cultivar-group) cDNA clone:...
72
6e-09
26 ref|NM_001074278.1| Oryza sativa (japonica cultivar-group) Os11g...
56
3e-04
27 gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s...
46
0.33
28 ref|NM_140251.2| Drosophila melanogaster CG10907-RA (CG10907), mRNA
46
0.33
29 gb|AC105263.2| Drosophila melanogaster 3L BAC RP98-48G3 (Roswell...
46
0.33
30 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.33
31 gb|AY070988.1| Drosophila melanogaster RE08109 full length cDNA
46
0.33
32 dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D...
46
0.33
33 dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.33
34 ref|XM_661737.1| Cryptosporidium hominis TU502 hypothetical prot...
44
1.3
35 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
44
1.3
36 dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
44
1.3
37 dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D...
44
1.3
38 dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D...
44
1.3
39 gb|AC188586.3| Callithrix jacchus BAC clone CH259-4H12 from chro...
42
5.1
40 gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, com...
42
5.1
41 ref|NM_001072905.1| Oryza sativa (japonica cultivar-group) Os12g...
42
5.1
42 ref|NM_001066120.1| Oryza sativa (japonica cultivar-group) Os07g...
42
5.1
43 gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete ...
42
5.1
44 gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome
42
5.1
45 gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, co...
42
5.1
46 gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete ...
42
5.1
47 gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
42
5.1
48 gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp...
42
5.1
49 gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com...
42
5.1
50 gb|CP000133.1| Rhizobium etli CFN 42, complete genome
42
5.1
51 gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete seq...
42
5.1
52 gb|AC091564.12| Homo sapiens chromosome 11, clone RP11-732A19, c...
42
5.1
53 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
54 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
55 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
56 gb|AC124172.4| Mus musculus BAC clone RP23-168P24 from chromosom...
42
5.1
57 gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare str...
42
5.1
58 emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos...
42
5.1
59 emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ...
42
5.1
60 gb|AC009796.6|AC009796 Homo sapiens chromosome 11, clone RP11-21...
42
5.1
61 gb|AF326688.1|AF326688 Burkholderia pseudomallei RNA polymerase ...
42
5.1
62 dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
63 dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
64 emb|CR524242.1| Gallus gallus finished cDNA, clone ChEST1013p17
42
5.1
65 dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
66 emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb...
42
5.1
67 gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com...
42
5.1
68 gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complet...
42
5.1
69 emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E...
42
5.1
70 gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, comple...
42
5.1
>dbj|AK240736.1 | Oryza sativa (japonica cultivar-group) cDNA, clone: J043034A04,
full insert sequence
Length = 1528
Score = 155 bits (78), Expect = 5e-34
Identities = 171/202 (84%)
Strand = Plus / Plus
Query: 89 gagcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcagg 148
|||||||||| |||||| | |||||||| ||||||| | || || |||||| |||| |
Sbjct: 75 gagcaatggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaag 134
Query: 149 cacaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcg 208
||||||| |||||||||||||||||||||||||||||| | ||||||| |||||| ||||
Sbjct: 135 cacaggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcg 194
Query: 209 ccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccg 268
|||||||||||| |||||||| | ||||| |||||||||| || ||| | | || |
Sbjct: 195 ccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctg 254
Query: 269 acctgatggccgcgctgtccct 290
||||||||||||||||||||||
Sbjct: 255 acctgatggccgcgctgtccct 276
Score = 91.7 bits (46), Expect = 6e-15
Identities = 175/218 (80%)
Strand = Plus / Plus
Query: 892 atgctcaagcttgtgctacacttctggagcgatgaggattgcgtgaaaatcctagctcag 951
|||||||||||||| || || || |||||| || || |||||||| ||||||||||||
Sbjct: 878 atgctcaagcttgttctgcatcacttgagcgacgatgactgcgtgaagatcctagctcag 937
Query: 952 tgcaggaaggccattccttcccgcgaggagggagggaagataatagtcattgaaattgtg 1011
|||| ||||| |||||||| || ||||||| |||||| | || ||||| || || ||
Sbjct: 938 tgcaaaaaggctattccttcacgaaaggagggcgggaagttgattgtcatagatatcttg 997
Query: 1012 gttggtccttccttagggccgataatgtttgaagcccaactccttatggacatgctcatg 1071
|||| || || || ||||| ||||||| ||||| || ||| | |||||||||||||||
Sbjct: 998 gttgaaccatctttggggcctgtaatgttcgaagcgcagctcatgatggacatgctcatg 1057
Query: 1072 atggtgaactcaaaaggacgtcaacgggatgaaaatga 1109
|||||||| | | ||| ||||||||| | ||||||||
Sbjct: 1058 atggtgaatactagaggtcgtcaacggaacgaaaatga 1095
Score = 69.9 bits (35), Expect = 2e-08
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 745 acggcgagagccatcatcagggcttacccgcacattaagtgcactgtgctggaccttcc 803
|||||||| |||||| ||| ||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 728 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcc 786
Score = 58.0 bits (29), Expect = 9e-05
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 390 ccgcctcacaccgttgtcccgcatcctggtgcacggtgtcgtagcggatgagcatcatag 449
||||||||| ||| |||||||||||||||| |||| ||||| || || ||||| |||||
Sbjct: 373 ccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatag 432
Query: 450 ccaga 454
|||||
Sbjct: 433 ccaga 437
Score = 44.1 bits (22), Expect = 1.3
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 539 cgccggtgccgtcgccattcgaggac 564
|||||||||||||||| |||||||||
Sbjct: 522 cgccggtgccgtcgccgttcgaggac 547
>gb|AC138195.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0005P21, complete sequence
Length = 147381
Score = 155 bits (78), Expect = 5e-34
Identities = 171/202 (84%)
Strand = Plus / Plus
Query: 89 gagcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcagg 148
|||||||||| |||||| | |||||||| ||||||| | || || |||||| |||| |
Sbjct: 63190 gagcaatggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaag 63249
Query: 149 cacaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcg 208
||||||| |||||||||||||||||||||||||||||| | ||||||| |||||| ||||
Sbjct: 63250 cacaggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcg 63309
Query: 209 ccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccg 268
|||||||||||| |||||||| | ||||| |||||||||| || ||| | | || |
Sbjct: 63310 ccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctg 63369
Query: 269 acctgatggccgcgctgtccct 290
||||||||||||||||||||||
Sbjct: 63370 acctgatggccgcgctgtccct 63391
Score = 145 bits (73), Expect = 5e-31
Identities = 139/161 (86%)
Strand = Plus / Plus
Query: 91 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 150
|||||||||| |||||| | || |||||||||||||| ||||||||||||||||| ||
Sbjct: 118888 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 118947
Query: 151 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 210
||||| || ||||||||||||||||||||||||||| |||||| || ||||| ||||||
Sbjct: 118948 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 119007
Query: 211 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 251
|| |||| | ||||| || ||||||||||||||||||||
Sbjct: 119008 atcaagctgggcatccccaccgccatccaccgcctcggcgg 119048
Score = 129 bits (65), Expect = 3e-26
Identities = 113/129 (87%)
Strand = Plus / Minus
Query: 123 tcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctacta 182
|||||| |||| ||| || || ||||| ||||| |||||||||||||||||||||||||
Sbjct: 131519 tcccactgacgatgaactcctacaggcgcaggccaacctgtggcgccacagcctctacta 131460
Query: 183 cctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccg 242
|||| |||||||||| ||||||||||||||| |||||| ||||| || | |||||||||
Sbjct: 131459 cctcacctccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccg 131400
Query: 243 cctcggcgg 251
|||||||||
Sbjct: 131399 cctcggcgg 131391
Score = 93.7 bits (47), Expect = 2e-15
Identities = 125/151 (82%)
Strand = Plus / Plus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| |||||| |||| ||||| || ||||||||||| |||||| || ||| ||||| |
Sbjct: 119513 tgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctc 119572
Query: 776 acattaagtgcactgtgctggaccttccgaaggtggtcgacaaagccccagcggatggtg 835
| | ||||||||||||||||||||||| |||||| ||||||| || || |||||||
Sbjct: 119573 atgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggtg 119632
Query: 836 tcgtcacctatgtcgcaggtgatttgttcca 866
|||| | |||||| |||||||| ||||||||
Sbjct: 119633 tcgttaactatgttgcaggtgacttgttcca 119663
Score = 87.7 bits (44), Expect = 1e-13
Identities = 155/192 (80%)
Strand = Plus / Plus
Query: 918 gagcgatgaggattgcgtgaaaatcctagctcagtgcaggaaggccattccttcccgcga 977
|||||| || || |||||||| |||||||||||||||| ||||| |||||||| || |
Sbjct: 64196 gagcgacgatgactgcgtgaagatcctagctcagtgcaaaaaggctattccttcacgaaa 64255
Query: 978 ggagggagggaagataatagtcattgaaattgtggttggtccttccttagggccgataat 1037
|||||| |||||| | || ||||| || || |||||| || || || ||||| ||||
Sbjct: 64256 ggagggcgggaagttgattgtcatagatatcttggttgaaccatctttggggcctgtaat 64315
Query: 1038 gtttgaagcccaactccttatggacatgctcatgatggtgaactcaaaaggacgtcaacg 1097
||| ||||| || ||| | ||||||||||||||||||||||| | | ||| ||||||||
Sbjct: 64316 gttcgaagcgcagctcatgatggacatgctcatgatggtgaatactagaggtcgtcaacg 64375
Query: 1098 ggatgaaaatga 1109
| | ||||||||
Sbjct: 64376 gaacgaaaatga 64387
Score = 85.7 bits (43), Expect = 4e-13
Identities = 112/135 (82%)
Strand = Plus / Plus
Query: 915 ctggagcgatgaggattgcgtgaaaatcctagctcagtgcaggaaggccattccttcccg 974
|||||||||||| ||||||||||| ||| | |||||||||| ||||||||||| || ||
Sbjct: 122879 ctggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacg 122938
Query: 975 cgaggagggagggaagataatagtcattgaaattgtggttggtccttccttagggccgat 1034
||||||||||||||| | || |||| || || ||||||| ||||| |||| || |
Sbjct: 122939 agaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagt 122998
Query: 1035 aatgtttgaagccca 1049
|||||||||||||||
Sbjct: 122999 aatgtttgaagccca 123013
Score = 69.9 bits (35), Expect = 2e-08
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 745 acggcgagagccatcatcagggcttacccgcacattaagtgcactgtgctggaccttcc 803
|||||||| |||||| ||| ||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 63843 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcc 63901
Score = 58.0 bits (29), Expect = 9e-05
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 390 ccgcctcacaccgttgtcccgcatcctggtgcacggtgtcgtagcggatgagcatcatag 449
||||||||| ||| |||||||||||||||| |||| ||||| || || ||||| |||||
Sbjct: 63488 ccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatag 63547
Query: 450 ccaga 454
|||||
Sbjct: 63548 ccaga 63552
Score = 54.0 bits (27), Expect = 0.001
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 721 gactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgcacatt 780
||||||||||| ||||| || || ||||||| |||||| ||||||| | |||| ||
Sbjct: 130903 gactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcccgggaatc 130844
Query: 781 aagtgcactgtgctggaccttcc 803
|||||||| ||||||||||||||
Sbjct: 130843 aagtgcaccgtgctggaccttcc 130821
Score = 52.0 bits (26), Expect = 0.005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1144 gactacaaaattgtgaagaaactaggagctcgatgcatcattgaggtcta 1193
|||||||| || |||| ||||||||||||||||| |||||||||||||
Sbjct: 128333 gactacaagatcatgaacaaactaggagctcgatgtgtcattgaggtcta 128284
Score = 50.1 bits (25), Expect = 0.021
Identities = 136/173 (78%)
Strand = Plus / Plus
Query: 392 gcctcacaccgttgtcccgcatcctggtgcacggtgtcgtagcggatgagcatcatagcc 451
||||||| ||| ||||||||||||| || | || ||||| || || ||||| || ||||
Sbjct: 119189 gcctcaccccgctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagcc 119248
Query: 452 agaagtattttgtgctcggcgtgacctcgccgcattacacggaggcggcgatggggctgg 511
||| || || ||||||| || ||| |||| ||| ||| ||||||||| |||||||||
Sbjct: 119249 agacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctgg 119308
Query: 512 ccggctggttcaggaaagaccatgagccgccggtgccgtcgccattcgaggac 564
|| ||||||||||| ||| | ||||||| | ||||| || |||||||||
Sbjct: 119309 acgagtggttcaggaaggacgtggcgccgccgctcccgtccccgttcgaggac 119361
Score = 50.1 bits (25), Expect = 0.021
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 915 ctggagcgatgaggattgcgtgaaaatcctagctcagtgcaggaaggccattccttc 971
|||||||||||| || || ||||||||||| || || |||| ||| |||||||||||
Sbjct: 128559 ctggagcgatgacgactgtgtgaaaatccttgcacaatgcaagaaagccattccttc 128503
Score = 44.1 bits (22), Expect = 1.3
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 539 cgccggtgccgtcgccattcgaggac 564
|||||||||||||||| |||||||||
Sbjct: 63637 cgccggtgccgtcgccgttcgaggac 63662
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
Length = 28386948
Score = 155 bits (78), Expect = 5e-34
Identities = 171/202 (84%)
Strand = Plus / Minus
Query: 89 gagcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcagg 148
|||||||||| |||||| | |||||||| ||||||| | || || |||||| |||| |
Sbjct: 11550598 gagcaatggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaag 11550539
Query: 149 cacaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcg 208
||||||| |||||||||||||||||||||||||||||| | ||||||| |||||| ||||
Sbjct: 11550538 cacaggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcg 11550479
Query: 209 ccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccg 268
|||||||||||| |||||||| | ||||| |||||||||| || ||| | | || |
Sbjct: 11550478 ccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctg 11550419
Query: 269 acctgatggccgcgctgtccct 290
||||||||||||||||||||||
Sbjct: 11550418 acctgatggccgcgctgtccct 11550397
Score = 145 bits (73), Expect = 5e-31
Identities = 139/161 (86%)
Strand = Plus / Minus
Query: 91 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 150
|||||||||| |||||| | || |||||||||||||| ||||||||||||||||| ||
Sbjct: 11494900 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 11494841
Query: 151 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 210
||||| || ||||||||||||||||||||||||||| |||||| || ||||| ||||||
Sbjct: 11494840 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 11494781
Query: 211 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 251
|| |||| | ||||| || ||||||||||||||||||||
Sbjct: 11494780 atcaagctgggcatccccaccgccatccaccgcctcggcgg 11494740
Score = 131 bits (66), Expect = 7e-27
Identities = 138/162 (85%)
Strand = Plus / Minus
Query: 90 agcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggc 149
||||||||||| ||| || | || ||| |||||||||| ||||||||||||||||| ||
Sbjct: 7139047 agcaatggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagc 7138988
Query: 150 acaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgc 209
|||||| ||||| |||||||||||| ||| ||||||| | ||||||| ||||| |||||
Sbjct: 7138987 acaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgc 7138928
Query: 210 cgtcgagctcgagatcccgactgccatccaccgcctcggcgg 251
|| | |||||| ||||| || ||||||||||||||||||||
Sbjct: 7138927 cgccaagctcggcatccccaccgccatccaccgcctcggcgg 7138886
Score = 129 bits (65), Expect = 3e-26
Identities = 113/129 (87%)
Strand = Plus / Plus
Query: 123 tcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctacta 182
|||||| |||| ||| || || ||||| ||||| |||||||||||||||||||||||||
Sbjct: 11482269 tcccactgacgatgaactcctacaggcgcaggccaacctgtggcgccacagcctctacta 11482328
Query: 183 cctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccg 242
|||| |||||||||| ||||||||||||||| |||||| ||||| || | |||||||||
Sbjct: 11482329 cctcacctccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccg 11482388
Query: 243 cctcggcgg 251
|||||||||
Sbjct: 11482389 cctcggcgg 11482397
Score = 119 bits (60), Expect = 3e-23
Identities = 120/140 (85%)
Strand = Plus / Minus
Query: 151 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 210
||||| || ||||||||||||| ||||| ||||||| |||||||| | ||||||||||||
Sbjct: 11303032 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 11302973
Query: 211 gtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccgac 270
||| | |||| ||||| || ||||||||||||| |||||| || |||||||||||||||
Sbjct: 11302972 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 11302913
Query: 271 ctgatggccgcgctgtccct 290
|| | |||||||||||||
Sbjct: 11302912 ctcgtcaccgcgctgtccct 11302893
Score = 101 bits (51), Expect = 6e-18
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 136 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 195
||||||||||| || ||||| ||||||||||||||||||||||||| | || | ||||||
Sbjct: 11331655 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 11331596
Query: 196 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 255
|| ||| |||||||||| |||||| ||||| || |||||||||||| || || |
Sbjct: 11331595 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 11331536
Query: 256 gcctcgctgcccgacctgatggccgcgctgtccct 290
||||||||||||||||| | ||||| ||||||||
Sbjct: 11331535 gcctcgctgcccgaccttgtcgccgccctgtccct 11331501
Score = 93.7 bits (47), Expect = 2e-15
Identities = 125/151 (82%)
Strand = Plus / Minus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| |||||| |||| ||||| || ||||||||||| |||||| || ||| ||||| |
Sbjct: 11494275 tgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctc 11494216
Query: 776 acattaagtgcactgtgctggaccttccgaaggtggtcgacaaagccccagcggatggtg 835
| | ||||||||||||||||||||||| |||||| ||||||| || || |||||||
Sbjct: 11494215 atgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggtg 11494156
Query: 836 tcgtcacctatgtcgcaggtgatttgttcca 866
|||| | |||||| |||||||| ||||||||
Sbjct: 11494155 tcgttaactatgttgcaggtgacttgttcca 11494125
Score = 89.7 bits (45), Expect = 2e-14
Identities = 114/137 (83%)
Strand = Plus / Minus
Query: 136 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 195
||||||||||| || ||||| ||| ||| ||||||||||||||||| | || | ||||||
Sbjct: 11355303 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 11355244
Query: 196 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 255
|| | | |||||||||| |||||| ||||| || |||||||||||| |||||| |
Sbjct: 11355243 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 11355184
Query: 256 gcctcgctgcccgacct 272
|||||||||||||||||
Sbjct: 11355183 gcctcgctgcccgacct 11355167
Score = 87.7 bits (44), Expect = 1e-13
Identities = 155/192 (80%)
Strand = Plus / Minus
Query: 918 gagcgatgaggattgcgtgaaaatcctagctcagtgcaggaaggccattccttcccgcga 977
|||||| || || |||||||| |||||||||||||||| ||||| |||||||| || |
Sbjct: 11549592 gagcgacgatgactgcgtgaagatcctagctcagtgcaaaaaggctattccttcacgaaa 11549533
Query: 978 ggagggagggaagataatagtcattgaaattgtggttggtccttccttagggccgataat 1037
|||||| |||||| | || ||||| || || |||||| || || || ||||| ||||
Sbjct: 11549532 ggagggcgggaagttgattgtcatagatatcttggttgaaccatctttggggcctgtaat 11549473
Query: 1038 gtttgaagcccaactccttatggacatgctcatgatggtgaactcaaaaggacgtcaacg 1097
||| ||||| || ||| | ||||||||||||||||||||||| | | ||| ||||||||
Sbjct: 11549472 gttcgaagcgcagctcatgatggacatgctcatgatggtgaatactagaggtcgtcaacg 11549413
Query: 1098 ggatgaaaatga 1109
| | ||||||||
Sbjct: 11549412 gaacgaaaatga 11549401
Score = 85.7 bits (43), Expect = 4e-13
Identities = 112/135 (82%)
Strand = Plus / Minus
Query: 915 ctggagcgatgaggattgcgtgaaaatcctagctcagtgcaggaaggccattccttcccg 974
|||||||||||| ||||||||||| ||| | |||||||||| ||||||||||| || ||
Sbjct: 11490909 ctggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacg 11490850
Query: 975 cgaggagggagggaagataatagtcattgaaattgtggttggtccttccttagggccgat 1034
||||||||||||||| | || |||| || || ||||||| ||||| |||| || |
Sbjct: 11490849 agaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagt 11490790
Query: 1035 aatgtttgaagccca 1049
|||||||||||||||
Sbjct: 11490789 aatgtttgaagccca 11490775
Score = 69.9 bits (35), Expect = 2e-08
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| ||||||| ||| ||||| || |||||||||| |||||| | ||| | |||||
Sbjct: 7138394 tgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgc 7138335
Query: 776 acattaagtgcactgtgctggaccttccgaaggtggtcgacaa 818
|||| |||||||| ||||||||||| ||||||||| |||||||
Sbjct: 7138334 acatcaagtgcacggtgctggacctcccgaaggtgatcgacaa 7138292
Score = 69.9 bits (35), Expect = 2e-08
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 745 acggcgagagccatcatcagggcttacccgcacattaagtgcactgtgctggaccttcc 803
|||||||| |||||| ||| ||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 11549945 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcc 11549887
Score = 63.9 bits (32), Expect = 1e-06
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 1144 gactacaaaattgtgaagaaactaggagctcgatgcatcattgaggtctatccata 1199
|||||||| |||||||||||||| ||||||||| || || |||||||||| |||||
Sbjct: 11353941 gactacaatattgtgaagaaactgggagctcgaggcgtctttgaggtctacccata 11353886
Score = 58.0 bits (29), Expect = 9e-05
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1147 tacaaaattgtgaagaaactaggagctcgatgcatcattgaggtctatccata 1199
||||| ||||||||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 11437290 tacaagattgtgaagaagctaggaattcgaggcatctttgaggtctatccata 11437238
Score = 58.0 bits (29), Expect = 9e-05
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 390 ccgcctcacaccgttgtcccgcatcctggtgcacggtgtcgtagcggatgagcatcatag 449
||||||||| ||| |||||||||||||||| |||| ||||| || || ||||| |||||
Sbjct: 11550300 ccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatag 11550241
Query: 450 ccaga 454
|||||
Sbjct: 11550240 ccaga 11550236
Score = 56.0 bits (28), Expect = 3e-04
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 899 agcttgtgctacacttctggagcgatgaggattgcgtgaaaatcctagctcagtgcagga 958
||||||| || || || ||||||||||| || |||||||| ||||| | ||||||| ||
Sbjct: 7137826 agcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaaga 7137767
Query: 959 aggccattccttcccgcgaggagggagggaag 990
| ||||| ||||| || ||||||||||||||
Sbjct: 7137766 aagccatcccttcacgaaaggagggagggaag 7137735
Score = 56.0 bits (28), Expect = 3e-04
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| ||||||||||| ||||| || |||||||||| ||||| || ||| | ||| |
Sbjct: 11439018 tgacagactgcggcggcggcgacggcgcgacggcgaggaccatcgtcgaggccttcccac 11438959
Query: 776 acattaagtgcactgtgctggaccttcc 803
|| | |||||||||||||||||||||||
Sbjct: 11438958 acgtcaagtgcactgtgctggaccttcc 11438931
Score = 56.0 bits (28), Expect = 3e-04
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 136 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 183
||||||||||| |||||||| || || |||||||||||||||| ||||
Sbjct: 11439601 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctac 11439554
Score = 54.0 bits (27), Expect = 0.001
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 926 aggattgcgtgaaaatcctagctcagtgcaggaaggccattcc 968
||||||||||||||||||||||||| |||| ||| || |||||
Sbjct: 11437508 aggattgcgtgaaaatcctagctcattgcaagaaagctattcc 11437466
Score = 54.0 bits (27), Expect = 0.001
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 721 gactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgcacatt 780
||||||||||| ||||| || || ||||||| |||||| ||||||| | |||| ||
Sbjct: 11482885 gactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcccgggaatc 11482944
Query: 781 aagtgcactgtgctggaccttcc 803
|||||||| ||||||||||||||
Sbjct: 11482945 aagtgcaccgtgctggaccttcc 11482967
Score = 52.0 bits (26), Expect = 0.005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 1143 ggactacaaaattgtgaagaaactaggagctcgatgcatcattgaggtctatcc 1196
||||||||| |||||||||||| | ||| |||| || ||||||||||||||||
Sbjct: 11294584 ggactacaagattgtgaagaaattgggacctcggtgtgtcattgaggtctatcc 11294531
Score = 52.0 bits (26), Expect = 0.005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 1144 gactacaaaattgtgaagaaactaggagctcgatgcatcattgaggtcta 1193
|||||||| || |||| ||||||||||||||||| |||||||||||||
Sbjct: 11485455 gactacaagatcatgaacaaactaggagctcgatgtgtcattgaggtcta 11485504
Score = 50.1 bits (25), Expect = 0.021
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 915 ctggagcgatgaggattgcgtgaaaatcctagctcagtgcaggaaggccattccttc 971
|||||||||||| || || ||||||||||| || || |||| ||| |||||||||||
Sbjct: 11485229 ctggagcgatgacgactgtgtgaaaatccttgcacaatgcaagaaagccattccttc 11485285
Score = 50.1 bits (25), Expect = 0.021
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 392 gcctcacaccgttgtcccgcatcctggtgcacggtgtcgtagcggatgagcatcatagcc 451
||||||| ||| ||||||||||||| || | || ||||| || || ||||| || ||||
Sbjct: 11494599 gcctcaccccgctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagcc 11494540
Query: 452 agaagtattttgtgctcggcgtgacctcgccgcattacacggaggcggcgatggggctgg 511
||| || || ||||||| || ||| |||| ||| ||| ||||||||| |||||||||
Sbjct: 11494539 agacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctgg 11494480
Query: 512 ccggctggttcaggaaagaccatgagccgccggtgccgtcgccattcgaggac 564
|| ||||||||||| ||| | ||||||| | ||||| || |||||||||
Sbjct: 11494479 acgagtggttcaggaaggacgtggcgccgccgctcccgtccccgttcgaggac 11494427
Score = 48.1 bits (24), Expect = 0.082
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 223 atcccgactgccatccaccgcctcggcggggcggcctcgctgcccgacctgatggccgcg 282
||||| || |||||||||||| |||||| || || ||||||||||||||| | ||||
Sbjct: 11439514 atccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgct 11439455
Query: 283 ctgtccct 290
||||||||
Sbjct: 11439454 ctgtccct 11439447
Score = 44.1 bits (22), Expect = 1.3
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 539 cgccggtgccgtcgccattcgaggac 564
|||||||||||||||| |||||||||
Sbjct: 7138574 cgccggtgccgtcgccgttcgaggac 7138549
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 387 ctaccgcctcacaccgttgtcccgcatcct 416
|||||||||||| ||| |||||||||||||
Sbjct: 7138747 ctaccgcctcaccccgctgtcccgcatcct 7138718
Score = 44.1 bits (22), Expect = 1.3
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 539 cgccggtgccgtcgccattcgaggac 564
|||||||||||||||| |||||||||
Sbjct: 11550151 cgccggtgccgtcgccgttcgaggac 11550126
Score = 42.1 bits (21), Expect = 5.1
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 492 ggaggcggcgatggggctggccggctggttcaggaaagacc 532
|||||||||||||||||| || | ||||||| |||| ||||
Sbjct: 11354929 ggaggcggcgatggggctcgcggactggttcgggaaggacc 11354889
>ref|NM_001074281.1 | Oryza sativa (japonica cultivar-group) Os11g0307300 (Os11g0307300)
mRNA, complete cds
Length = 1107
Score = 145 bits (73), Expect = 5e-31
Identities = 166/197 (84%)
Strand = Plus / Plus
Query: 94 atggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggcacag 153
||||| |||||| | |||||||| ||||||| | || || |||||| |||| ||||||
Sbjct: 1 atggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaagcacag 60
Query: 154 gcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgccgtc 213
|| |||||||||||||||||||||||||||||| | ||||||| |||||| |||||||||
Sbjct: 61 gccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgccgtc 120
Query: 214 gagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccgacctg 273
||||||| |||||||| | ||||| |||||||||| || ||| | | || ||||||
Sbjct: 121 gagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctgacctg 180
Query: 274 atggccgcgctgtccct 290
|||||||||||||||||
Sbjct: 181 atggccgcgctgtccct 197
Score = 91.7 bits (46), Expect = 6e-15
Identities = 175/218 (80%)
Strand = Plus / Plus
Query: 892 atgctcaagcttgtgctacacttctggagcgatgaggattgcgtgaaaatcctagctcag 951
|||||||||||||| || || || |||||| || || |||||||| ||||||||||||
Sbjct: 799 atgctcaagcttgttctgcatcacttgagcgacgatgactgcgtgaagatcctagctcag 858
Query: 952 tgcaggaaggccattccttcccgcgaggagggagggaagataatagtcattgaaattgtg 1011
|||| ||||| |||||||| || ||||||| |||||| | || ||||| || || ||
Sbjct: 859 tgcaaaaaggctattccttcacgaaaggagggcgggaagttgattgtcatagatatcttg 918
Query: 1012 gttggtccttccttagggccgataatgtttgaagcccaactccttatggacatgctcatg 1071
|||| || || || ||||| ||||||| ||||| || ||| | |||||||||||||||
Sbjct: 919 gttgaaccatctttggggcctgtaatgttcgaagcgcagctcatgatggacatgctcatg 978
Query: 1072 atggtgaactcaaaaggacgtcaacgggatgaaaatga 1109
|||||||| | | ||| ||||||||| | ||||||||
Sbjct: 979 atggtgaatactagaggtcgtcaacggaacgaaaatga 1016
Score = 69.9 bits (35), Expect = 2e-08
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 745 acggcgagagccatcatcagggcttacccgcacattaagtgcactgtgctggaccttcc 803
|||||||| |||||| ||| ||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 649 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcc 707
Score = 58.0 bits (29), Expect = 9e-05
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 390 ccgcctcacaccgttgtcccgcatcctggtgcacggtgtcgtagcggatgagcatcatag 449
||||||||| ||| |||||||||||||||| |||| ||||| || || ||||| |||||
Sbjct: 294 ccgcctcactccgctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatag 353
Query: 450 ccaga 454
|||||
Sbjct: 354 ccaga 358
Score = 44.1 bits (22), Expect = 1.3
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 539 cgccggtgccgtcgccattcgaggac 564
|||||||||||||||| |||||||||
Sbjct: 443 cgccggtgccgtcgccgttcgaggac 468
>gb|AC135793.4 | Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
Length = 128418
Score = 145 bits (73), Expect = 5e-31
Identities = 139/161 (86%)
Strand = Plus / Plus
Query: 91 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 150
|||||||||| |||||| | || |||||||||||||| ||||||||||||||||| ||
Sbjct: 4637 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 4696
Query: 151 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 210
||||| || ||||||||||||||||||||||||||| |||||| || ||||| ||||||
Sbjct: 4697 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 4756
Query: 211 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 251
|| |||| | ||||| || ||||||||||||||||||||
Sbjct: 4757 atcaagctgggcatccccaccgccatccaccgcctcggcgg 4797
Score = 129 bits (65), Expect = 3e-26
Identities = 113/129 (87%)
Strand = Plus / Minus
Query: 123 tcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctacta 182
|||||| |||| ||| || || ||||| ||||| |||||||||||||||||||||||||
Sbjct: 17268 tcccactgacgatgaactcctacaggcgcaggccaacctgtggcgccacagcctctacta 17209
Query: 183 cctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccg 242
|||| |||||||||| ||||||||||||||| |||||| ||||| || | |||||||||
Sbjct: 17208 cctcacctccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccg 17149
Query: 243 cctcggcgg 251
|||||||||
Sbjct: 17148 cctcggcgg 17140
Score = 93.7 bits (47), Expect = 2e-15
Identities = 125/151 (82%)
Strand = Plus / Plus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| |||||| |||| ||||| || ||||||||||| |||||| || ||| ||||| |
Sbjct: 5262 tgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccctc 5321
Query: 776 acattaagtgcactgtgctggaccttccgaaggtggtcgacaaagccccagcggatggtg 835
| | ||||||||||||||||||||||| |||||| ||||||| || || |||||||
Sbjct: 5322 atgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggtg 5381
Query: 836 tcgtcacctatgtcgcaggtgatttgttcca 866
|||| | |||||| |||||||| ||||||||
Sbjct: 5382 tcgttaactatgttgcaggtgacttgttcca 5412
Score = 85.7 bits (43), Expect = 4e-13
Identities = 112/135 (82%)
Strand = Plus / Plus
Query: 915 ctggagcgatgaggattgcgtgaaaatcctagctcagtgcaggaaggccattccttcccg 974
|||||||||||| ||||||||||| ||| | |||||||||| ||||||||||| || ||
Sbjct: 8628 ctggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacg 8687
Query: 975 cgaggagggagggaagataatagtcattgaaattgtggttggtccttccttagggccgat 1034
||||||||||||||| | || |||| || || ||||||| ||||| |||| || |
Sbjct: 8688 agaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagt 8747
Query: 1035 aatgtttgaagccca 1049
|||||||||||||||
Sbjct: 8748 aatgtttgaagccca 8762
Score = 58.0 bits (29), Expect = 9e-05
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1147 tacaaaattgtgaagaaactaggagctcgatgcatcattgaggtctatccata 1199
||||| ||||||||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 62247 tacaagattgtgaagaagctaggaattcgaggcatctttgaggtctatccata 62299
Score = 56.0 bits (28), Expect = 3e-04
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 136 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 183
||||||||||| |||||||| || || |||||||||||||||| ||||
Sbjct: 59936 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctac 59983
Score = 56.0 bits (28), Expect = 3e-04
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| ||||||||||| ||||| || |||||||||| ||||| || ||| | ||| |
Sbjct: 60519 tgacagactgcggcggcggcgacggcgcgacggcgaggaccatcgtcgaggccttcccac 60578
Query: 776 acattaagtgcactgtgctggaccttcc 803
|| | |||||||||||||||||||||||
Sbjct: 60579 acgtcaagtgcactgtgctggaccttcc 60606
Score = 54.0 bits (27), Expect = 0.001
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 721 gactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgcacatt 780
||||||||||| ||||| || || ||||||| |||||| ||||||| | |||| ||
Sbjct: 16652 gactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcccgggaatc 16593
Query: 781 aagtgcactgtgctggaccttcc 803
|||||||| ||||||||||||||
Sbjct: 16592 aagtgcaccgtgctggaccttcc 16570
Score = 54.0 bits (27), Expect = 0.001
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 926 aggattgcgtgaaaatcctagctcagtgcaggaaggccattcc 968
||||||||||||||||||||||||| |||| ||| || |||||
Sbjct: 62029 aggattgcgtgaaaatcctagctcattgcaagaaagctattcc 62071
Score = 52.0 bits (26), Expect = 0.005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1144 gactacaaaattgtgaagaaactaggagctcgatgcatcattgaggtcta 1193
|||||||| || |||| ||||||||||||||||| |||||||||||||
Sbjct: 14082 gactacaagatcatgaacaaactaggagctcgatgtgtcattgaggtcta 14033
Score = 50.1 bits (25), Expect = 0.021
Identities = 136/173 (78%)
Strand = Plus / Plus
Query: 392 gcctcacaccgttgtcccgcatcctggtgcacggtgtcgtagcggatgagcatcatagcc 451
||||||| ||| ||||||||||||| || | || ||||| || || ||||| || ||||
Sbjct: 4938 gcctcaccccgctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagcc 4997
Query: 452 agaagtattttgtgctcggcgtgacctcgccgcattacacggaggcggcgatggggctgg 511
||| || || ||||||| || ||| |||| ||| ||| ||||||||| |||||||||
Sbjct: 4998 agacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctgg 5057
Query: 512 ccggctggttcaggaaagaccatgagccgccggtgccgtcgccattcgaggac 564
|| ||||||||||| ||| | ||||||| | ||||| || |||||||||
Sbjct: 5058 acgagtggttcaggaaggacgtggcgccgccgctcccgtccccgttcgaggac 5110
Score = 50.1 bits (25), Expect = 0.021
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 915 ctggagcgatgaggattgcgtgaaaatcctagctcagtgcaggaaggccattccttc 971
|||||||||||| || || ||||||||||| || || |||| ||| |||||||||||
Sbjct: 14308 ctggagcgatgacgactgtgtgaaaatccttgcacaatgcaagaaagccattccttc 14252
Score = 48.1 bits (24), Expect = 0.082
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 223 atcccgactgccatccaccgcctcggcggggcggcctcgctgcccgacctgatggccgcg 282
||||| || |||||||||||| |||||| || || ||||||||||||||| | ||||
Sbjct: 60023 atccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgct 60082
Query: 283 ctgtccct 290
||||||||
Sbjct: 60083 ctgtccct 60090
>gb|AC135258.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0097K08 map C827S, complete sequence
Length = 137870
Score = 131 bits (66), Expect = 7e-27
Identities = 138/162 (85%)
Strand = Plus / Plus
Query: 90 agcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggc 149
||||||||||| ||| || | || ||| |||||||||| ||||||||||||||||| ||
Sbjct: 43508 agcaatggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagc 43567
Query: 150 acaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgc 209
|||||| ||||| |||||||||||| ||| ||||||| | ||||||| ||||| |||||
Sbjct: 43568 acaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgc 43627
Query: 210 cgtcgagctcgagatcccgactgccatccaccgcctcggcgg 251
|| | |||||| ||||| || ||||||||||||||||||||
Sbjct: 43628 cgccaagctcggcatccccaccgccatccaccgcctcggcgg 43669
Score = 69.9 bits (35), Expect = 2e-08
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| ||||||| ||| ||||| || |||||||||| |||||| | ||| | |||||
Sbjct: 44161 tgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgc 44220
Query: 776 acattaagtgcactgtgctggaccttccgaaggtggtcgacaa 818
|||| |||||||| ||||||||||| ||||||||| |||||||
Sbjct: 44221 acatcaagtgcacggtgctggacctcccgaaggtgatcgacaa 44263
Score = 56.0 bits (28), Expect = 3e-04
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 899 agcttgtgctacacttctggagcgatgaggattgcgtgaaaatcctagctcagtgcagga 958
||||||| || || || ||||||||||| || |||||||| ||||| | ||||||| ||
Sbjct: 44729 agcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaaga 44788
Query: 959 aggccattccttcccgcgaggagggagggaag 990
| ||||| ||||| || ||||||||||||||
Sbjct: 44789 aagccatcccttcacgaaaggagggagggaag 44820
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 387 ctaccgcctcacaccgttgtcccgcatcct 416
|||||||||||| ||| |||||||||||||
Sbjct: 43808 ctaccgcctcaccccgctgtcccgcatcct 43837
Score = 44.1 bits (22), Expect = 1.3
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 539 cgccggtgccgtcgccattcgaggac 564
|||||||||||||||| |||||||||
Sbjct: 43981 cgccggtgccgtcgccgttcgaggac 44006
>gb|AC147811.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0026P08 map near C827S, complete sequence
Length = 148676
Score = 131 bits (66), Expect = 7e-27
Identities = 138/162 (85%)
Strand = Plus / Minus
Query: 90 agcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggc 149
||||||||||| ||| || | || ||| |||||||||| ||||||||||||||||| ||
Sbjct: 52267 agcaatggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagc 52208
Query: 150 acaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgc 209
|||||| ||||| |||||||||||| ||| ||||||| | ||||||| ||||| |||||
Sbjct: 52207 acaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgc 52148
Query: 210 cgtcgagctcgagatcccgactgccatccaccgcctcggcgg 251
|| | |||||| ||||| || ||||||||||||||||||||
Sbjct: 52147 cgccaagctcggcatccccaccgccatccaccgcctcggcgg 52106
Score = 69.9 bits (35), Expect = 2e-08
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| ||||||| ||| ||||| || |||||||||| |||||| | ||| | |||||
Sbjct: 51614 tgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgc 51555
Query: 776 acattaagtgcactgtgctggaccttccgaaggtggtcgacaa 818
|||| |||||||| ||||||||||| ||||||||| |||||||
Sbjct: 51554 acatcaagtgcacggtgctggacctcccgaaggtgatcgacaa 51512
Score = 56.0 bits (28), Expect = 3e-04
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 899 agcttgtgctacacttctggagcgatgaggattgcgtgaaaatcctagctcagtgcagga 958
||||||| || || || ||||||||||| || |||||||| ||||| | ||||||| ||
Sbjct: 51046 agcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaaga 50987
Query: 959 aggccattccttcccgcgaggagggagggaag 990
| ||||| ||||| || ||||||||||||||
Sbjct: 50986 aagccatcccttcacgaaaggagggagggaag 50955
Score = 44.1 bits (22), Expect = 1.3
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 539 cgccggtgccgtcgccattcgaggac 564
|||||||||||||||| |||||||||
Sbjct: 51794 cgccggtgccgtcgccgttcgaggac 51769
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 387 ctaccgcctcacaccgttgtcccgcatcct 416
|||||||||||| ||| |||||||||||||
Sbjct: 51967 ctaccgcctcaccccgctgtcccgcatcct 51938
>ref|NM_001074098.1 | Oryza sativa (japonica cultivar-group) Os11g0235500 (Os11g0235500)
mRNA, complete cds
Length = 1137
Score = 129 bits (65), Expect = 3e-26
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 119 aggttcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctct 178
|||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||| |||
Sbjct: 26 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 85
Query: 179 actacctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatcc 238
||||||| | ||||||| ||||| ||||||| | |||||| ||||| || |||||||
Sbjct: 86 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcc 145
Query: 239 accgcctcggcgg 251
|||||||||||||
Sbjct: 146 accgcctcggcgg 158
Score = 87.7 bits (44), Expect = 1e-13
Identities = 220/278 (79%), Gaps = 3/278 (1%)
Strand = Plus / Plus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| ||||||| ||| ||||| || |||||||||| |||||| | ||| | |||||
Sbjct: 650 tgaccgactgcgccggcggcgacggcgcgacggcgagggccatcgccgcggcattcccgc 709
Query: 776 acattaagtgcactgtgctggaccttccgaaggtggtcgacaaagccccagcg---gatg 832
|||| |||||||| ||||||||||| ||||||||| ||||||| || || | | ||||
Sbjct: 710 acatcaagtgcacggtgctggacctcccgaaggtgatcgacaaggcgccggtggatgatg 769
Query: 833 gtgtcgtcacctatgtcgcaggtgatttgttccattccgtcccatcatcacaggctgtga 892
| || || | |||||| |||||||| |||| ||| | |||||| | | || || |||
Sbjct: 770 gcgtggttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaagccgtgc 829
Query: 893 tgctcaagcttgtgctacacttctggagcgatgaggattgcgtgaaaatcctagctcagt 952
| ||||||||||| || || || ||||||||||| || |||||||| ||||| | ||||
Sbjct: 830 ttctcaagcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagt 889
Query: 953 gcaggaaggccattccttcccgcgaggagggagggaag 990
||| ||| ||||| ||||| || ||||||||||||||
Sbjct: 890 gcaagaaagccatcccttcacgaaaggagggagggaag 927
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 387 ctaccgcctcacaccgttgtcccgcatcct 416
|||||||||||| ||| |||||||||||||
Sbjct: 297 ctaccgcctcaccccgctgtcccgcatcct 326
Score = 44.1 bits (22), Expect = 1.3
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 539 cgccggtgccgtcgccattcgaggac 564
|||||||||||||||| |||||||||
Sbjct: 470 cgccggtgccgtcgccgttcgaggac 495
>gb|AC112208.3 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0015P05 map C53961S, complete sequence
Length = 175121
Score = 119 bits (60), Expect = 3e-23
Identities = 120/140 (85%)
Strand = Plus / Minus
Query: 151 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 210
||||| || ||||||||||||| ||||| ||||||| |||||||| | ||||||||||||
Sbjct: 89390 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 89331
Query: 211 gtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccgac 270
||| | |||| ||||| || ||||||||||||| |||||| || |||||||||||||||
Sbjct: 89330 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 89271
Query: 271 ctgatggccgcgctgtccct 290
|| | |||||||||||||
Sbjct: 89270 ctcgtcaccgcgctgtccct 89251
Score = 101 bits (51), Expect = 6e-18
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 136 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 195
||||||||||| || ||||| ||||||||||||||||||||||||| | || | ||||||
Sbjct: 118013 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 117954
Query: 196 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 255
|| ||| |||||||||| |||||| ||||| || |||||||||||| || || |
Sbjct: 117953 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 117894
Query: 256 gcctcgctgcccgacctgatggccgcgctgtccct 290
||||||||||||||||| | ||||| ||||||||
Sbjct: 117893 gcctcgctgcccgaccttgtcgccgccctgtccct 117859
Score = 89.7 bits (45), Expect = 2e-14
Identities = 114/137 (83%)
Strand = Plus / Minus
Query: 136 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 195
||||||||||| || ||||| ||| ||| ||||||||||||||||| | || | ||||||
Sbjct: 141661 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 141602
Query: 196 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 255
|| | | |||||||||| |||||| ||||| || |||||||||||| |||||| |
Sbjct: 141601 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 141542
Query: 256 gcctcgctgcccgacct 272
|||||||||||||||||
Sbjct: 141541 gcctcgctgcccgacct 141525
Score = 63.9 bits (32), Expect = 1e-06
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 1144 gactacaaaattgtgaagaaactaggagctcgatgcatcattgaggtctatccata 1199
|||||||| |||||||||||||| ||||||||| || || |||||||||| |||||
Sbjct: 140299 gactacaatattgtgaagaaactgggagctcgaggcgtctttgaggtctacccata 140244
Score = 52.0 bits (26), Expect = 0.005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 1143 ggactacaaaattgtgaagaaactaggagctcgatgcatcattgaggtctatcc 1196
||||||||| |||||||||||| | ||| |||| || ||||||||||||||||
Sbjct: 80942 ggactacaagattgtgaagaaattgggacctcggtgtgtcattgaggtctatcc 80889
Score = 42.1 bits (21), Expect = 5.1
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 492 ggaggcggcgatggggctggccggctggttcaggaaagacc 532
|||||||||||||||||| || | ||||||| |||| ||||
Sbjct: 141287 ggaggcggcgatggggctcgcggactggttcgggaaggacc 141247
>emb|CT836570.1 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105I03, full
insert sequence
Length = 1305
Score = 71.9 bits (36), Expect = 6e-09
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 716 tgactgactgcggcggtggcgatggtacgacggcgagagccatcatcagggcttacccgc 775
|||| ||||||||||| |||||||| |||||||||| ||||| || ||| | ||| |
Sbjct: 664 tgacagactgcggcggcggcgatggcgcgacggcgaggaccatcgtcgaggccttcccac 723
Query: 776 acattaagtgcactgtgctggaccttcc 803
|||| |||||||||||||||||||||||
Sbjct: 724 acatcaagtgcactgtgctggaccttcc 751
Score = 63.9 bits (32), Expect = 1e-06
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 136 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 183
||||||||||| |||||||| || || |||||||||||||||||||||
Sbjct: 81 gagctgctgcaagcacaggccgatctatggcgccacagcctctactac 128
Score = 56.0 bits (28), Expect = 3e-04
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 881 cacaggctgtgatgctcaagcttgtgctacacttctggagcgatgaggattgcgtgaaaa 940
|||| ||||||||||| ||| |||| || ||| ||||| || |||||||||||||||
Sbjct: 829 cacaagctgtgatgctaaaggttgtacttcaccattggagtgaccaggattgcgtgaaaa 888
Query: 941 tcctagctcagtgcaggaaggccattcc 968
|||||||||| |||| ||| || |||||
Sbjct: 889 tcctagctcattgcaagaaagctattcc 916
Score = 50.1 bits (25), Expect = 0.021
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 1155 tgtgaagaaactaggagctcgatgcatcattgaggtctatccata 1199
||||||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 1100 tgtgaagaagctaggaattcgaggcatctttgaggtctatccata 1144
Score = 48.1 bits (24), Expect = 0.082
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 223 atcccgactgccatccaccgcctcggcggggcggcctcgctgcccgacctgatggccgcg 282
||||| || |||||||||||| |||||| || || ||||||||||||||| | ||||
Sbjct: 168 atccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgct 227
Query: 283 ctgtccct 290
||||||||
Sbjct: 228 ctgtccct 235
>gb|AC149282.2 | Mus musculus BAC clone RP23-236D19 from 7, complete sequence
Length = 221553
Score = 42.1 bits (21), Expect = 5.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 133 gctgagctgctgcaggcacag 153
|||||||||||||||||||||
Sbjct: 21042 gctgagctgctgcaggcacag 21062
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 205,752,779
Number of extensions: 10625315
Number of successful extensions: 205798
Number of sequences better than 10.0: 70
Number of HSP's gapped: 205759
Number of HSP's successfully gapped: 186
Length of query: 1338
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1315
Effective length of database: 18,503,978,556
Effective search space: 24332731801140
Effective search space used: 24332731801140
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)